View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4607-Insertion-6 (Length: 1054)

Name: NF4607-Insertion-6
Description: NF4607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4607-Insertion-6
NF4607-Insertion-6
[»] chr6 (22 HSPs)
chr6 (838-1036)||(20505210-20505406)
chr6 (170-325)||(20505550-20505705)
chr6 (334-578)||(20505753-20505989)
chr6 (182-316)||(20475758-20475892)
chr6 (723-795)||(2700133-2700205)
chr6 (201-265)||(2917028-2917092)
chr6 (229-316)||(20517633-20517723)
chr6 (723-795)||(19674309-19674381)
chr6 (723-795)||(33687630-33687702)
chr6 (204-255)||(6869512-6869563)
chr6 (710-764)||(11956759-11956813)
chr6 (734-795)||(35129636-35129696)
chr6 (723-795)||(21309027-21309099)
chr6 (710-761)||(10642693-10642744)
chr6 (714-761)||(12183061-12183108)
chr6 (238-325)||(20493629-20493716)
chr6 (700-762)||(5740850-5740912)
chr6 (715-761)||(13605152-13605198)
chr6 (715-761)||(19478137-19478183)
chr6 (715-760)||(3901901-3901946)
chr6 (723-792)||(11570779-11570848)
chr6 (738-791)||(14508995-14509048)
[»] chr1 (18 HSPs)
chr1 (220-325)||(13072245-13072350)
chr1 (723-795)||(3094110-3094182)
chr1 (723-794)||(40165976-40166047)
chr1 (723-795)||(26927749-26927821)
chr1 (723-795)||(47451252-47451324)
chr1 (740-795)||(39588394-39588449)
chr1 (715-761)||(38734264-38734310)
chr1 (723-760)||(4632988-4633025)
chr1 (723-795)||(12259992-12260064)
chr1 (723-795)||(23192844-23192916)
chr1 (711-779)||(27461744-27461812)
chr1 (723-791)||(47455417-47455485)
chr1 (711-761)||(10106088-10106138)
chr1 (715-761)||(14582088-14582134)
chr1 (741-795)||(19799040-19799094)
chr1 (723-785)||(25855167-25855229)
chr1 (715-761)||(39747225-39747271)
chr1 (711-760)||(13890798-13890847)
[»] chr8 (24 HSPs)
chr8 (723-795)||(34118462-34118534)
chr8 (734-787)||(4544285-4544338)
chr8 (723-795)||(1807468-1807540)
chr8 (723-795)||(4238342-4238414)
chr8 (723-795)||(4243081-4243153)
chr8 (723-795)||(19166630-19166702)
chr8 (723-795)||(28559681-28559753)
chr8 (723-795)||(31449893-31449965)
chr8 (725-795)||(15875695-15875765)
chr8 (715-761)||(31030517-31030563)
chr8 (723-795)||(17025931-17026003)
chr8 (723-795)||(17556423-17556495)
chr8 (723-791)||(17953904-17953972)
chr8 (723-795)||(33416543-33416615)
chr8 (723-795)||(36683575-36683647)
chr8 (723-795)||(40125912-40125984)
chr8 (723-795)||(44925950-44926022)
chr8 (723-786)||(40130722-40130785)
chr8 (715-761)||(19430003-19430049)
chr8 (715-761)||(19435505-19435551)
chr8 (715-761)||(19566152-19566198)
chr8 (715-761)||(19571654-19571700)
chr8 (715-761)||(33616787-33616833)
chr8 (734-795)||(19949826-19949886)
[»] chr5 (20 HSPs)
chr5 (723-795)||(7451754-7451826)
chr5 (723-795)||(12103021-12103093)
chr5 (723-795)||(36937538-36937610)
chr5 (723-795)||(36942292-36942364)
chr5 (723-795)||(3665928-3666000)
chr5 (723-795)||(26667268-26667340)
chr5 (723-795)||(26938865-26938937)
chr5 (723-795)||(29168000-29168072)
chr5 (725-795)||(41587187-41587257)
chr5 (708-761)||(14374117-14374170)
chr5 (723-795)||(556691-556763)
chr5 (723-795)||(561463-561535)
chr5 (723-795)||(12045166-12045238)
chr5 (723-795)||(36428705-36428777)
chr5 (723-795)||(39523045-39523117)
chr5 (723-795)||(42001430-42001502)
chr5 (723-762)||(1430043-1430082)
chr5 (724-795)||(32461576-32461647)
chr5 (740-795)||(35679902-35679957)
chr5 (711-761)||(7805056-7805106)
[»] chr3 (20 HSPs)
chr3 (723-795)||(3033638-3033710)
chr3 (723-795)||(3672580-3672652)
chr3 (723-795)||(3692612-3692684)
chr3 (724-795)||(3657267-3657338)
chr3 (723-795)||(3418989-3419061)
chr3 (723-795)||(7571245-7571317)
chr3 (723-795)||(12112668-12112740)
chr3 (723-795)||(18467219-18467291)
chr3 (723-795)||(23666150-23666222)
chr3 (723-795)||(24038398-24038470)
chr3 (723-795)||(39775755-39775827)
chr3 (723-792)||(29350234-29350303)
chr3 (723-795)||(8069674-8069745)
chr3 (727-795)||(8883168-8883236)
chr3 (723-795)||(49971451-49971523)
chr3 (740-795)||(12965900-12965955)
chr3 (715-761)||(20810361-20810407)
chr3 (715-761)||(33089403-33089449)
chr3 (745-795)||(46964031-46964081)
chr3 (734-795)||(48435855-48435915)
[»] chr2 (13 HSPs)
chr2 (723-795)||(9180751-9180823)
chr2 (723-795)||(1935020-1935092)
chr2 (723-795)||(9189830-9189902)
chr2 (723-795)||(10160751-10160823)
chr2 (723-795)||(19892493-19892565)
chr2 (723-795)||(31326735-31326807)
chr2 (724-795)||(30658260-30658331)
chr2 (725-795)||(18344429-18344499)
chr2 (723-795)||(7737878-7737950)
chr2 (723-795)||(28603294-28603366)
chr2 (723-795)||(29677377-29677449)
chr2 (723-795)||(30650925-30650997)
chr2 (725-795)||(40847622-40847692)
[»] chr4 (18 HSPs)
chr4 (723-770)||(13065820-13065867)
chr4 (723-795)||(5271446-5271518)
chr4 (723-795)||(13522019-13522091)
chr4 (723-795)||(31273517-31273589)
chr4 (723-795)||(51696998-51697070)
chr4 (710-761)||(10318840-10318891)
chr4 (723-795)||(5928246-5928318)
chr4 (723-795)||(31269030-31269102)
chr4 (723-791)||(33463387-33463455)
chr4 (723-795)||(37259904-37259976)
chr4 (723-795)||(37264591-37264663)
chr4 (723-795)||(42758782-42758854)
chr4 (723-795)||(51697913-51697985)
chr4 (723-795)||(55251716-55251787)
chr4 (703-762)||(31099254-31099313)
chr4 (702-761)||(34644533-34644592)
chr4 (734-795)||(20513114-20513174)
chr4 (716-761)||(36354166-36354211)
[»] scaffold0352 (1 HSPs)
scaffold0352 (723-795)||(7100-7172)
[»] scaffold0182 (1 HSPs)
scaffold0182 (723-795)||(9914-9986)
[»] chr7 (11 HSPs)
chr7 (723-795)||(4579504-4579576)
chr7 (723-795)||(9650994-9651066)
chr7 (724-795)||(23866065-23866136)
chr7 (725-795)||(8268291-8268361)
chr7 (722-795)||(8076045-8076118)
chr7 (715-760)||(24528343-24528388)
chr7 (723-795)||(4930229-4930301)
chr7 (723-795)||(26341195-26341267)
chr7 (723-795)||(27238238-27238310)
chr7 (725-795)||(23246960-23247030)
chr7 (738-795)||(3284738-3284795)
[»] scaffold0067 (1 HSPs)
scaffold0067 (714-761)||(34029-34076)
[»] scaffold0011 (2 HSPs)
scaffold0011 (711-761)||(1550-1600)
scaffold0011 (715-761)||(7035-7081)
[»] scaffold2020 (1 HSPs)
scaffold2020 (723-795)||(367-439)
[»] scaffold0057 (1 HSPs)
scaffold0057 (723-795)||(35630-35702)
[»] scaffold0009 (1 HSPs)
scaffold0009 (723-795)||(165056-165128)
[»] scaffold0002 (1 HSPs)
scaffold0002 (723-795)||(4070-4142)


Alignment Details
Target: chr6 (Bit Score: 131; Significance: 2e-67; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 838 - 1036
Target Start/End: Complemental strand, 20505406 - 20505210
Alignment:
Q  838 tcatcacctactacattgtaaataattgtttgagaaaccgtggcacaattttggttcaatttttggaggctgtttctgtcagaaaattgtggtgtgaagg 937  Q
    |||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  20505406 tcattacctactgcattgtaaataattgtttgtgaaatcgtggcacaattttggttcaacttttggaggctgattttgtcagaaaattgtggtgtgaagg 20505307  T
Q  938 atgtaatcgtgggggagattttgaggatcaggattagtacagtactgattatgagctctaatctgatcacacaatctagaacaaatcgtgacacgattt 1036  Q
    |||||||||| |||| |||||||||||||| ||||||| || |||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  20505306 atgtaatcgt-ggggcgattttgaggatcaagattagtgcaatactaattatgagctctaatatgatcacacaatctag-acaaatcgtgacacgattt 20505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 170 - 325
Target Start/End: Original strand, 20505550 - 20505705
Alignment:
Q  170 gaaagctatgatatcttgacaggtacactaattgagattgagttcacaaagaagcctgattgtgttaaatcatcaaaatggttgatatttattgataatg 269  Q
    |||||| |||| |||||||| |||| || ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20505550 gaaagcgatgagatcttgacgggtagaccaatcgagattgagttcacaaagaagcctgattgtgttgaatcatcaaaatggttgatatttattgataatg 20505649  T
Q  270 ctattaataaattttgtgttggtattggtggtccagaaaactatcctagtatgcaa 325  Q
     |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  20505650 ttattaatatattttgtgttggtattggtggtcgagaaaactatcctggtatgcaa 20505705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 334 - 578
Target Start/End: Original strand, 20505753 - 20505989
Alignment:
Q  334 tttgtatattgtgtcgatggatcttctagtttttgtttggatattggttttataataatggtgaaggtggaggacgtttgattttggctgataaccagat 433  Q
    ||||||| |||||| ||||||||||||||||||||||   |||||||          ||||||||| ||||||||||||||||||| ||||  | || ||    
T  20505753 tttgtattttgtgttgatggatcttctagtttttgttcaaatattgg----------atggtgaagttggaggacgtttgattttgactgaccaacaaat 20505842  T
Q  434 ttcttcttatgtgtttactgaaactt---attcttatgaagatgaaattattaagtctgttgcttgaatttttacattgctagtaaacgagtttatgtaa 530  Q
    |||| ||| ||| ||| |||| |||    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||  | ||||||||    
T  20505843 ttctgcttttgtattttctgagactgttaattcttatgaagatggaattattaagtctgttgcttgaatttttacattgctagtgaacttgattatgtaa 20505942  T
Q  531 cttcagtttcttgctttaatgaattatgtgcttttacaatgtaagcat 578  Q
    ||| || |||||| ||| || |||| |||| |||||| ||||||||||    
T  20505943 cttaag-ttcttgttttgataaattctgtgtttttactatgtaagcat 20505989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 182 - 316
Target Start/End: Original strand, 20475758 - 20475892
Alignment:
Q  182 atcttgacaggtacactaattgagattgagttcacaaagaagcctgattgtgttaaatcatcaaaatggttgatatttattgataatgctattaataaat 281  Q
    ||||| || ||||||| |||||| || |||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||| || |||| | |||     
T  20475758 atcttcactggtacaccaattgatatcgagttcacaaagaagcctaattgcgttgaatcatcaaaatggttgatatttgttgatagtgttattcaaaaag 20475857  T
Q  282 tttgtgttggtattggtggtccagaaaactatcct 316  Q
     ||||||||||||||||||||| ||||| ||||||    
T  20475858 cttgtgttggtattggtggtcctgaaaattatcct 20475892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 2700205 - 2700133
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| |  ||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  2700205 ggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactat 2700133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 2917028 - 2917092
Alignment:
Q  201 ttgagattgagttcacaaagaagcctgattgtgttaaatcatcaaaatggttgatatttattgat 265  Q
    ||||||||||||| || |||||||||||||||| | ||||||||||||||||||| ||| |||||    
T  2917028 ttgagattgagtttactaagaagcctgattgtgctgaatcatcaaaatggttgatgtttcttgat 2917092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 316
Target Start/End: Original strand, 20517633 - 20517723
Alignment:
Q  229 ttgtgttaaatcatcaaaatggttgatatttattgataatgctatt---aataaattttgtgttggtattggtggtccagaaaactatcct 316  Q
    ||||||| ||||||||||||||||||||||| ||||||||| || |   || ||||  | |||||||||||||||||| ||||||||||||    
T  20517633 ttgtgttgaatcatcaaaatggttgatatttgttgataatgttaataacaacaaatcatttgttggtattggtggtcctgaaaactatcct 20517723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 19674309 - 19674381
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | ||| |||||||||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  19674309 ggttgagtcacgaccaggtcactctctttaagacgtttcatggcactgcccaaaattgtgcaagacagactat 19674381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 33687702 - 33687630
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||||||||| || | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  33687702 ggttgagttaccaccaggtcgctctctttaagacgtttcgtggcactggccaaaattgtgcaagacagactat 33687630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 6869563 - 6869512
Alignment:
Q  204 agattgagttcacaaagaagcctgattgtgttaaatcatcaaaatggttgat 255  Q
    ||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||    
T  6869563 agattgagttcactaagaagcctaattgtgtcaaatcatcacaatggttgat 6869512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 710 - 764
Target Start/End: Complemental strand, 11956813 - 11956759
Alignment:
Q  710 gaagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttcatg 764  Q
    ||||| ||||||||||||||| | ||| | |||||||||||||||||||||||||    
T  11956813 gaagagattatcgggttgagtcatgaccaggtcgctctctttaagacgtttcatg 11956759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 795
Target Start/End: Original strand, 35129636 - 35129696
Alignment:
Q  734 gactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||| |||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  35129636 gactaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaag-cagactat 35129696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 21309027 - 21309099
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| || || || ||||||||||||||||||||||||| ||||  |||||||| ||||  ||||||||    
T  21309027 ggttgagtcactaccatatcgctctctttaagacgtttcatggcactgcccaaaattgtgcaatgcagactat 21309099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 761
Target Start/End: Original strand, 10642693 - 10642744
Alignment:
Q  710 gaagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||| |||| |||||||||| ||||| |||||||| |||||||||||||||    
T  10642693 gaagatattaccgggttgagtcacgacaatgtcgctttctttaagacgtttc 10642744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 761
Target Start/End: Complemental strand, 12183108 - 12183061
Alignment:
Q  714 aaattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||    
T  12183108 aaattatcaggttgagtcacgaccaggtcgctctctttaagacgtttc 12183061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 325
Target Start/End: Original strand, 20493629 - 20493716
Alignment:
Q  238 atcatcaaaatggttgatatttattgataatgctattaataaattttgtgttggtattggtggtccagaaaactatcctagtatgcaa 325  Q
    |||| |||||||||| |||||| ||||||||| ||||   |||  |||| |||||||||||||||| ||||| |||||| || |||||    
T  20493629 atcaacaaaatggttaatatttgttgataatgttattggaaaagcttgtattggtattggtggtcctgaaaattatcctggtgtgcaa 20493716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 700 - 762
Target Start/End: Complemental strand, 5740912 - 5740850
Alignment:
Q  700 atttaccacagaagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttca 762  Q
    |||||||||  |||| |||| |||||||||| | ||||| ||| |||||||||||||||||||    
T  5740912 atttaccaccaaagagattaccgggttgagtcatgactaggtcactctctttaagacgtttca 5740850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Complemental strand, 13605198 - 13605152
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||| |||||||||| ||||||| || |||||||||||||||||||    
T  13605198 aattaccgggttgagtcacgactaggttgctctctttaagacgtttc 13605152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 19478137 - 19478183
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||||    
T  19478137 aattaccgggttgagtcacgaccaggtcgctctctttaagacgtttc 19478183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 715 - 760
Target Start/End: Original strand, 3901901 - 3901946
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgttt 760  Q
    ||||| |||||||||| ||||| | |||||||||||||||||||||    
T  3901901 aattaccgggttgagtcacgaccaggtcgctctctttaagacgttt 3901946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 723 - 792
Target Start/End: Complemental strand, 11570848 - 11570779
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagac 792  Q
    |||||||| || || | |||||||||||||||||||||| ||| ||||  |||||||| ||||| |||||    
T  11570848 ggttgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagac 11570779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 738 - 791
Target Start/End: Original strand, 14508995 - 14509048
Alignment:
Q  738 atgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcaga 791  Q
    ||||||||||||| |||||||||| ||  |||||||||||||| ||||| ||||    
T  14508995 atgtcgctctcttcaagacgtttcgtgtcactgttcaaaattgtgcaagacaga 14509048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 2e-33; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 13072350 - 13072245
Alignment:
Q  220 gaagcctgattgtgttaaatcatcaaaatggttgatatttattgataatgctattaataaattttgtgttggtattggtggtccagaaaactatcctagt 319  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||| |||| | |||| |||||||||||||||||||||||||||||||||| ||    
T  13072350 gaagcctgattgtgttgaatcttcaaaatggttgatatttgttgataatgttattcaaaaatcttgtgttggtattggtggtccagaaaactatcctggt 13072251  T
Q  320 atgcaa 325  Q
    ||||||    
T  13072250 atgcaa 13072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 3094110 - 3094182
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  3094110 ggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactat 3094182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 723 - 794
Target Start/End: Original strand, 40165976 - 40166047
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagacta 794  Q
    |||||||| ||||| |||||||||||||||||||||||| ||| ||||  |||||||| ||||| |||||||    
T  40165976 ggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagacta 40166047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 26927821 - 26927749
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||||| |||||||||||||||||||||| ||| | ||  |||||||| ||||| ||||||||    
T  26927821 ggttgagtcacgactaagtcgctctctttaagacgtttcgtggcattgcccaaaattgtgcaaggcagactat 26927749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 47451324 - 47451252
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||||||| ||||   ||||||| ||||| ||||||||    
T  47451324 ggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgccaaaaattgtgcaagacagactat 47451252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 740 - 795
Target Start/End: Complemental strand, 39588449 - 39588394
Alignment:
Q  740 gtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||    
T  39588449 gtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaagacagactat 39588394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 38734264 - 38734310
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  38734264 aattatcgggttgagtcacgaccaggtcgctctctttaagacgtttc 38734310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 723 - 760
Target Start/End: Complemental strand, 4633025 - 4632988
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgttt 760  Q
    |||||||| |||||||||||||||||||||||||||||    
T  4633025 ggttgagtcacgactatgtcgctctctttaagacgttt 4632988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 12259992 - 12260064
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||  ||||| |||||||||||||||||||||||| ||  ||||  |||||||| ||||| ||||||||    
T  12259992 ggttgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaagacagactat 12260064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 23192916 - 23192844
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  ||||||||  |||| ||||||||    
T  23192916 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactat 23192844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 711 - 779
Target Start/End: Complemental strand, 27461812 - 27461744
Alignment:
Q  711 aagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaatt 779  Q
    |||||||||||||||||||| ||||| |||||| ||||||||| | ||||| ||  |||||| ||||||    
T  27461812 aagaaattatcgggttgagtcacgaccatgtcgttctctttaataagtttcgtgatactgtttaaaatt 27461744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 791
Target Start/End: Complemental strand, 47455485 - 47455417
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcaga 791  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| | ||| |||||||| ||||| ||||    
T  47455485 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgtccaaaattgtgcaagacaga 47455417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 711 - 761
Target Start/End: Original strand, 10106088 - 10106138
Alignment:
Q  711 aagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||| || |||||||||| ||||| | ||||||||||||||||||||||    
T  10106088 aagaaaataccgggttgagtcacgaccaggtcgctctctttaagacgtttc 10106138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 14582088 - 14582134
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||||||||||||||||||  | |||||||||||||||| |||||    
T  14582088 aattatcgggttgagttacgatcaggtcgctctctttaagaagtttc 14582134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 741 - 795
Target Start/End: Complemental strand, 19799094 - 19799040
Alignment:
Q  741 tcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||||||||||||||||||| ||| ||| | |||||||| ||||| ||||||||    
T  19799094 tcgctctctttaagacgtttcgtggcactatccaaaattgtgcaagacagactat 19799040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 723 - 785
Target Start/End: Original strand, 25855167 - 25855229
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaa 785  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||    
T  25855167 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaa 25855229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Complemental strand, 39747271 - 39747225
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||||||||||||| ||||| | || |||||||||||||||||||    
T  39747271 aattatcgggttgagtcacgaccaggttgctctctttaagacgtttc 39747225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 760
Target Start/End: Original strand, 13890798 - 13890847
Alignment:
Q  711 aagaaattatcgggttgagttacgactatgtcgctctctttaagacgttt 760  Q
    |||||| || |||||||||| ||||| | |||||||||||||||||||||    
T  13890798 aagaaaataccgggttgagtcacgaccaggtcgctctctttaagacgttt 13890847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 34118462 - 34118534
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  34118462 ggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactat 34118534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 787
Target Start/End: Complemental strand, 4544338 - 4544285
Alignment:
Q  734 gactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagt 787  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  4544338 gactaggtcgctctctttaagacgtttcatggcactgctcaaaattgtgcaagt 4544285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 1807468 - 1807540
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||||| |||||||||||||||||||||| ||  ||||  |||||||| ||||| ||||||||    
T  1807468 ggttgagtcacgactaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactat 1807540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 4238414 - 4238342
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||| ||||||||||| ||||  |||||||| ||||| ||||||||    
T  4238414 ggttgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactat 4238342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 4243153 - 4243081
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||| ||||||||||| ||||  |||||||| ||||| ||||||||    
T  4243153 ggttgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactat 4243081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 19166630 - 19166702
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| |||||||||||||||||||||||| ||| ||||  |||||||| ||| | ||||||||    
T  19166630 ggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactat 19166702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 28559753 - 28559681
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| |||||||||||| ||||||||||| ||| ||||| |||||||| ||||| || |||||    
T  28559753 ggttgagtcacgacaatgtcgctctctataagacgtttcgtggcactgtccaaaattgtgcaaggcaaactat 28559681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 31449965 - 31449893
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  31449965 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 31449893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 725 - 795
Target Start/End: Complemental strand, 15875765 - 15875695
Alignment:
Q  725 ttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||||||| | ||||||||||||| |||||||| ||| ||||  |||||||| ||||| ||||||||    
T  15875765 ttgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactat 15875695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 31030517 - 31030563
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  31030517 aattatcgggttgagtcacgaccaggtcgctctctttaagacgtttc 31030563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 17025931 - 17026003
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  ||| |||| ||||| ||||||||    
T  17025931 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactat 17026003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 17556423 - 17556495
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  ||| |||| ||||| ||||||||    
T  17556423 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactat 17556495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 791
Target Start/End: Complemental strand, 17953972 - 17953904
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcaga 791  Q
    |||||||| ||||| |||||||| ||||||||||||||| ||| ||||  |||||||| ||||| ||||    
T  17953972 ggttgagtaacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaagacaga 17953904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 33416543 - 33416615
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||| ||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  33416543 ggttgagtcacgaccaggtcggtctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 33416615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 36683575 - 36683647
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| | ||||| |||||||||||||||||||||| ||| ||||  |||||||| | ||| ||||||||    
T  36683575 ggttgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaggcagactat 36683647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 40125984 - 40125912
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| |  ||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  40125984 ggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 40125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 44926022 - 44925950
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||| ||||||| ||| ||||  |||||||| ||||| ||||||||    
T  44926022 ggttgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcccaaaattgtgcaaggcagactat 44925950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 786
Target Start/End: Complemental strand, 40130785 - 40130722
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaag 786  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| |||||    
T  40130785 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag 40130722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 19430003 - 19430049
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||||    
T  19430003 aattaccgggttgagtcacgaccaggtcgctctctttaagacgtttc 19430049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 19435505 - 19435551
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||||    
T  19435505 aattaccgggttgagtcacgaccaggtcgctctctttaagacgtttc 19435551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 19566152 - 19566198
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||||    
T  19566152 aattaccgggttgagtcacgaccaggtcgctctctttaagacgtttc 19566198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 19571654 - 19571700
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||||    
T  19571654 aattaccgggttgagtcacgaccaggtcgctctctttaagacgtttc 19571700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Complemental strand, 33616833 - 33616787
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||||||| |||||| ||||| | ||||||||||||||||||||||    
T  33616833 aattatcggattgagtcacgaccaggtcgctctctttaagacgtttc 33616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 795
Target Start/End: Original strand, 19949826 - 19949886
Alignment:
Q  734 gactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||| |||||||||||||||| ||||| ||| ||||  |||||||||||||| ||||||||    
T  19949826 gactacgtcgctctctttaagaagtttcgtggcactgcccaaaattgagcaag-cagactat 19949886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 7451754 - 7451826
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||    
T  7451754 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactat 7451826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 12103021 - 12103093
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||||||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  12103021 ggttgagttacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 12103093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 36937610 - 36937538
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  36937610 ggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactat 36937538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 36942364 - 36942292
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  36942364 ggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactat 36942292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 3665928 - 3666000
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||||| ||||||||||| |||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  3665928 ggttgagtcacgactaggtcgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 3666000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 26667268 - 26667340
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  26667268 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 26667340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 26938865 - 26938937
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  26938865 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 26938937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 29168072 - 29168000
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  29168072 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 29168000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 725 - 795
Target Start/End: Complemental strand, 41587257 - 41587187
Alignment:
Q  725 ttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||| ||||| | || ||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||    
T  41587257 ttgagtcacgaccaggttgctctctttaagacgtttcgtgacactgttcaaaattgtgcaagacagactat 41587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 708 - 761
Target Start/End: Original strand, 14374117 - 14374170
Alignment:
Q  708 cagaagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||||||| || |||||||||| ||||| | ||||||||||||||||||||||    
T  14374117 cagaagaaaataccgggttgagtcacgaccaggtcgctctctttaagacgtttc 14374170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 556691 - 556763
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||  ||| ||||  |||||||| ||||| ||||||||    
T  556691 ggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactat 556763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 561463 - 561535
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||  ||| ||||  |||||||| ||||| ||||||||    
T  561463 ggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactat 561535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 12045238 - 12045166
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | ||||| |||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  12045238 ggttgagtcacgaccaggtcgccctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 12045166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 36428705 - 36428777
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||   |||||||  |||||||| ||||| ||||||||    
T  36428705 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggaactgcccaaaattgtgcaaggcagactat 36428777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 39523045 - 39523117
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| || |  |||||||| ||||| ||||||||    
T  39523045 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcaagacagactat 39523117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 42001430 - 42001502
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| | ||| ||||||||    
T  42001430 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactat 42001502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 762
Target Start/End: Complemental strand, 1430082 - 1430043
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttca 762  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  1430082 ggttgagttacgactatgtcgttttctttaagacgtttca 1430043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 724 - 795
Target Start/End: Complemental strand, 32461647 - 32461576
Alignment:
Q  724 gttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||||| ||||| | |||||||||||||||||||||  ||| ||||  |||||||| ||||| ||||||||    
T  32461647 gttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagacagactat 32461576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 795
Target Start/End: Complemental strand, 35679957 - 35679902
Alignment:
Q  740 gtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||||||||||||||||| ||| |||||  ||||||| ||||| ||||||||    
T  35679957 gtcgctctctttaagacgtttcgtggcactgtcaaaaattgtgcaaggcagactat 35679902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 711 - 761
Target Start/End: Original strand, 7805056 - 7805106
Alignment:
Q  711 aagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||| ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  7805056 aagaaaatatcgggttgagtcacgaccaggtccctctctttaagacgtttc 7805106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 3033638 - 3033710
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  3033638 ggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactat 3033710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 3672580 - 3672652
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  3672580 ggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactat 3672652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 3692612 - 3692684
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  3692612 ggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactat 3692684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 724 - 795
Target Start/End: Complemental strand, 3657338 - 3657267
Alignment:
Q  724 gttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||||| |||| ||  ||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  3657338 gttgagtcacgattagatcgctctctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactat 3657267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 3418989 - 3419061
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  3418989 ggttgagtcacgaccaagtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 3419061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 7571317 - 7571245
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  7571317 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 7571245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 12112740 - 12112668
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||| | ||||||| |||||||||||||||||||||| ||| ||||| |||| ||| ||||| ||||||||    
T  12112740 ggttgaatcacgactaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaagacagactat 12112668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 18467219 - 18467291
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  18467219 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 18467291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 23666222 - 23666150
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  23666222 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 23666150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 24038470 - 24038398
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  24038470 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 24038398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 39775827 - 39775755
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  39775827 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 39775755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 723 - 792
Target Start/End: Original strand, 29350234 - 29350303
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagac 792  Q
    |||||||| ||||| |||||||| ||||||||||||||| ||| ||||  |||||||| ||||| |||||    
T  29350234 ggttgagtcacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagac 29350303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 8069674 - 8069745
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| |||| || |||||| ||||| ||||||||    
T  8069674 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactg-tccaaattgtgcaagacagactat 8069745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 727 - 795
Target Start/End: Original strand, 8883168 - 8883236
Alignment:
Q  727 gagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  8883168 gagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 8883236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 49971523 - 49971451
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||| ||||||||||||||||| ||| ||| | |||||||| ||||| ||||||||    
T  49971523 ggttgagtcacgaccaggtcgatctctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactat 49971451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 795
Target Start/End: Complemental strand, 12965955 - 12965900
Alignment:
Q  740 gtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||||||||||||||||||| |||| ||||  |||||||| ||||| ||||||||    
T  12965955 gtcgctctctttaagacgttttatggcactgcccaaaattgtgcaagacagactat 12965900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 20810361 - 20810407
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||||||||||||| ||||| | |||| |||||||||||||||||    
T  20810361 aattatcgggttgagtcacgaccaggtcgttctctttaagacgtttc 20810407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 715 - 761
Target Start/End: Complemental strand, 33089449 - 33089403
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||||    
T  33089449 aattaccgggttgagtcacgaccaggtcgctctctttaagacgtttc 33089403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 745 - 795
Target Start/End: Original strand, 46964031 - 46964081
Alignment:
Q  745 tctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||||||||||||||||||| |||||| ||||||| ||||  ||||||||    
T  46964031 tctctttaagacgtttcatggcactgtttaaaattgtgcaatgcagactat 46964081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 795
Target Start/End: Complemental strand, 48435915 - 48435855
Alignment:
Q  734 gactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||| |||||||||||||||||||||| ||  |||||||||||| | ||||| ||||||||    
T  48435915 gactaggtcgctctctttaagacgtttcgtgacactgttcaaaatagtgcaag-cagactat 48435855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 9180823 - 9180751
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||    
T  9180823 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactat 9180751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 1935092 - 1935020
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  1935092 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 1935020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 9189902 - 9189830
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | || ||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||    
T  9189902 ggttgagtcacgaccaggttgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactat 9189830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 10160823 - 10160751
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  10160823 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 10160751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 19892565 - 19892493
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||| |||||||| ||||  ||||||||    
T  19892565 ggttgagtcacgaccaggtcgctctctttaagacgtttcctggcactgtccaaaattgtgcaacacagactat 19892493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 31326735 - 31326807
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||||||  ||||  |||||||| ||||| ||||||||    
T  31326735 ggttgagtcacgaccaggtcgctctctttaagacgtttcatgccactgcccaaaattgtgcaaggcagactat 31326807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 724 - 795
Target Start/End: Original strand, 30658260 - 30658331
Alignment:
Q  724 gttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||||| ||||| | |||||||||||||||||||||| ||| |||  ||||||||| ||||| ||||||||    
T  30658260 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactat 30658331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 725 - 795
Target Start/End: Original strand, 18344429 - 18344499
Alignment:
Q  725 ttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  18344429 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 18344499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 7737950 - 7737878
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| |||||||||||||||||| ||||  ||| ||||  |||||||| ||||| ||||||||    
T  7737950 ggttgagtcacgaccatgtcgctctctttaagaagttttgtggcactgcccaaaattgtgcaagacagactat 7737878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 28603294 - 28603366
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||| ||||||| ||  ||||| |||||||| ||||| ||||||||    
T  28603294 ggttgagtcacgaccaggtcgctctctttaaaacgtttcgtgacactgtccaaaattgtgcaagacagactat 28603366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 29677377 - 29677449
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||  |||||||||||||||||||||||| ||| ||||  |||||||| ||||  ||||||||    
T  29677377 ggttgagtcacgatcatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaagcagactat 29677449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 30650925 - 30650997
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| |  ||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  30650925 ggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 30650997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 725 - 795
Target Start/End: Complemental strand, 40847692 - 40847622
Alignment:
Q  725 ttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||| ||||| |||||| ||||||||||||||||  ||| |||||||||| ||| ||||| || |||||    
T  40847692 ttgagtcacgaccatgtcgttctctttaagacgttttgtggcactgttcaaagttgtgcaaggcaaactat 40847622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 723 - 770
Target Start/End: Complemental strand, 13065867 - 13065820
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactg 770  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  13065867 ggttgagtcacgactatgtcgctctctttaagacgtttcatggcactg 13065820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 5271518 - 5271446
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  5271518 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 5271446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 13522091 - 13522019
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  13522091 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 13522019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 31273517 - 31273589
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  31273517 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 31273589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 51696998 - 51697070
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | ||||||||| |||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  51696998 ggttgagtcacgaccaggtcgctctccttaagacgtttcatggcactgcccaaaattgtgcaaggcagactat 51697070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 710 - 761
Target Start/End: Complemental strand, 10318891 - 10318840
Alignment:
Q  710 gaagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||||||| |||||||||| ||||| ||||||||||||||||||| ||||    
T  10318891 gaagaaattaccgggttgagtcacgaccatgtcgctctctttaagacatttc 10318840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 5928318 - 5928246
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||| ||||  ||| |||| ||||||||| ||||| ||||||||    
T  5928318 ggttgagtcacgaccaggtcgctctctttaagatgtttagtggcactgctcaaaattgtgcaaggcagactat 5928246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 31269030 - 31269102
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||   ||||||| ||||| ||||||||    
T  31269030 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaaggcagactat 31269102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 791
Target Start/End: Complemental strand, 33463455 - 33463387
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcaga 791  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||| |||| ||| ||||| ||||    
T  33463455 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaaggcaga 33463387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 37259976 - 37259904
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||| ||||||||||||||| ||| |||  ||||||||| ||||| ||||||||    
T  37259976 ggttgagtcacgaccaggtcgctttctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactat 37259904  T

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Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 37264663 - 37264591
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||  ||||| ||||||||    
T  37264663 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattatgcaaggcagactat 37264591  T

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Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 42758854 - 42758782
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||| ||||| ||| ||||  |||||||| ||||| ||||||||    
T  42758854 ggttgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactat 42758782  T

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Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 51697913 - 51697985
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| |  ||||||| ||||||||||||||||  |||| ||||||||| ||||| ||||||||    
T  51697913 ggttgagtcacgaccagatcgctctttttaagacgtttcatgacactgctcaaaattgtgcaaggcagactat 51697985  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 55251716 - 55251787
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||| ||||||||||||| ||| ||||| |||||||| ||||| ||||||||    
T  55251716 ggttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgtccaaaattgtgcaagacagactat 55251787  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 703 - 762
Target Start/End: Original strand, 31099254 - 31099313
Alignment:
Q  703 taccacagaagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttca 762  Q
    |||||| ||||| |||||||||||| || ||||| | ||||||||||| |||||||||||    
T  31099254 taccaccgaagagattatcgggttgggtcacgaccaagtcgctctcttcaagacgtttca 31099313  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 761
Target Start/End: Original strand, 34644533 - 34644592
Alignment:
Q  702 ttaccacagaagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||||| ||||| |||| |||||||||| ||||  |||||||| |||||||||||||||    
T  34644533 ttaccaccgaagatattaccgggttgagtcacgatcatgtcgctttctttaagacgtttc 34644592  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 795
Target Start/End: Original strand, 20513114 - 20513174
Alignment:
Q  734 gactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||| |||||||||||||||| ||||| ||| |||| ||||||||| ||||| ||||||||    
T  20513114 gactaggtcgctctctttaagatgtttcgtggcactgctcaaaattgtgcaag-cagactat 20513174  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 761
Target Start/End: Original strand, 36354166 - 36354211
Alignment:
Q  716 attatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||||||| ||||| ||||| | ||||||||||||||||||||||    
T  36354166 attatcgggatgagtcacgaccaggtcgctctctttaagacgtttc 36354211  T

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Target: scaffold0352 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 7100 - 7172
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  7100 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 7172  T

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Target: scaffold0182 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 9986 - 9914
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  9986 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 9914  T

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Target: chr7 (Bit Score: 37; Significance: 0.00000000003; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 4579504 - 4579576
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  4579504 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactat 4579576  T

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Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 9651066 - 9650994
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  9651066 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 9650994  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 724 - 795
Target Start/End: Original strand, 23866065 - 23866136
Alignment:
Q  724 gttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| ||||| ||||||||    
T  23866065 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactat 23866136  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 725 - 795
Target Start/End: Original strand, 8268291 - 8268361
Alignment:
Q  725 ttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||| ||||| | |||||||||||||||||||||  ||| ||||| |||||||| ||||| ||||||||    
T  8268291 ttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactat 8268361  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 722 - 795
Target Start/End: Original strand, 8076045 - 8076118
Alignment:
Q  722 gggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    ||||||||| ||||| | |||||||||||||||||||||| ||| ||||   ||||||| ||||| ||||||||    
T  8076045 gggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaagacagactat 8076118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 715 - 760
Target Start/End: Original strand, 24528343 - 24528388
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgttt 760  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||    
T  24528343 aattatcgggttgagtcacgaccaggtcgctctctttaagacgttt 24528388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 4930229 - 4930301
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||||  |||||||| | |||||| |||||    
T  4930229 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagtcatactat 4930301  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 26341195 - 26341267
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | ||||||||||||||||| |||| ||| ||||  |||||||| ||||| ||||||||    
T  26341195 ggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactat 26341267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 27238238 - 27238310
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | |||||||||||||||||||||  ||| |||| ||||||||| | ||| ||||||||    
T  27238238 ggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgctcaaaattgtgtaaggcagactat 27238310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 725 - 795
Target Start/End: Complemental strand, 23247030 - 23246960
Alignment:
Q  725 ttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||| ||||| | |||||||||||||||| ||||| ||| ||||  |||||||| ||||| ||||||||    
T  23247030 ttgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactat 23246960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 738 - 795
Target Start/End: Original strand, 3284738 - 3284795
Alignment:
Q  738 atgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||||||||||||| ||||| ||  |||||||||| ||| ||||| ||||||||    
T  3284738 atgtcgctctctttaagatgtttcgtgctactgttcaaacttgtgcaagacagactat 3284795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 714 - 761
Target Start/End: Complemental strand, 34076 - 34029
Alignment:
Q  714 aaattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  34076 aaattatcgggttgagtcacgaccaggtcgctctctttaagacgtttc 34029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 761
Target Start/End: Original strand, 1550 - 1600
Alignment:
Q  711 aagaaattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||||||||||||| ||| ||||| | ||||||||||||||||||||||    
T  1550 aagaaattatcgggttaagtcacgaccaggtcgctctctttaagacgtttc 1600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 715 - 761
Target Start/End: Original strand, 7035 - 7081
Alignment:
Q  715 aattatcgggttgagttacgactatgtcgctctctttaagacgtttc 761  Q
    |||||||||||||||||||||| | |||| |||||||||||||||||    
T  7035 aattatcgggttgagttacgaccaggtcgttctctttaagacgtttc 7081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 367 - 439
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| |||||||||||||| | ||||||||||||||||| | ||| |||| ||| ||||| || |||||    
T  367 ggttgagtcacgactatgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactat 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 35630 - 35702
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||| ||||||||| ||| |||||||||||||||||||| ||  ||||  |||||||| ||||| ||||||||    
T  35630 ggttaagttacgaccatgccgctctctttaagacgtttcgtgacactggccaaaattgtgcaaggcagactat 35702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 165128 - 165056
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| |||||||||||||| | ||||||||||||||||| | ||| |||| ||| ||||| || |||||    
T  165128 ggttgagtcacgactatgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactat 165056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 4070 - 4142
Alignment:
Q  723 ggttgagttacgactatgtcgctctctttaagacgtttcatggaactgttcaaaattgagcaagtcagactat 795  Q
    |||||||| ||||| | ||||||||||||||||| |||| ||| ||||  |||||||| ||||| ||||||||    
T  4070 ggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactat 4142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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