View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4607_1D_low_30 (Length: 230)
Name: NF4607_1D_low_30
Description: NF4607_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4607_1D_low_30 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 4410601 - 4410821
Alignment:
| Q |
1 |
atcatcaaatgttgctaacttaacgaatctcgcttatagttcctcgaattgtagcaatgagctttcactaagtcttgcaacatctccaacttcaggtcaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
4410601 |
atcatcaaatgttgctaacttaacgaatctcgcttatagttcctcgaattgtagcaatgagctttcactaagtcttgcaacatctccaacttcagttcaa |
4410700 |
T |
|
| Q |
101 |
tgctcagagattagttgttcagacttaactcatagcatgaatggaacaagatcaggtttggaacaagcctcatgtagtagtatggaactttctatgagtt |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4410701 |
tgctcagagattagttgttctgacttaactcatagcatgaatggaacaagatcaggtttggaacaagcctcatgtagtagtatggaactttctatgagtt |
4410800 |
T |
|
| Q |
201 |
tagggaatgataaacatgtca |
221 |
Q |
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||||||||||||||||||||| |
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| T |
4410801 |
tagggaatgataaacatgtca |
4410821 |
T |
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