View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4607_1D_low_35 (Length: 215)
Name: NF4607_1D_low_35
Description: NF4607_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4607_1D_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 40999276 - 40999073
Alignment:
| Q |
1 |
tttcttacttcattgatagattaattgagtatttatacaagggtgcacaaaatgaaatataaagatcaaaaaagaaacatcgaattaacctaacaactca |
100 |
Q |
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| T |
40999276 |
tttcttacttcattgatagattaattgagtatttatacaagggtgcacaaaatgaaatacaaagatcaaaaaagaaacatcgaattaacctaacaactca |
40999177 |
T |
|
| Q |
101 |
ataacctaactccttacattattcaatagatatcgatcaagtacgtctcaaccgaaaaaacaaggagaatcataaacttgtaatttcactaaatgatgtc |
200 |
Q |
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||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
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| T |
40999176 |
ataacctaactgcttacattattcaatagataccaatcaagtacgtctcaaccgaaaaaataaggagaatcataaacttgtaatttcactaaatcatgtc |
40999077 |
T |
|
| Q |
201 |
catc |
204 |
Q |
| |
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|||| |
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| T |
40999076 |
catc |
40999073 |
T |
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