View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4607_1D_low_36 (Length: 211)
Name: NF4607_1D_low_36
Description: NF4607_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4607_1D_low_36 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 40506855 - 40506645
Alignment:
| Q |
1 |
aatggatattcacacacacatttcaatacccacaacttttatatcccatcgtttctcttcaccaacccaaactttatcatcctcttctttccattcctat |
100 |
Q |
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| T |
40506855 |
aatggatattcacacacacatttcaatacccacaacttttatatcccatcgtttctcttcaccaacccaaactttatcatcctcttctttccattcctat |
40506756 |
T |
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| Q |
101 |
ttccccttcaaatttgtagtatgttccaaaagggacgatcaatctcaaacaaacgccgataacaatggtannnnnnnacaattactgtttttattcttca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
40506755 |
ttccccttcaaatttgtagtatgttccaaaagggacgatcaatctcaaacaaacgccgataacaatggtatttttctacaattactgtttttattcttca |
40506656 |
T |
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| Q |
201 |
cttcagccagc |
211 |
Q |
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||||||||||| |
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| T |
40506655 |
cttcagccagc |
40506645 |
T |
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