View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4608-Insertion-12 (Length: 178)

Name: NF4608-Insertion-12
Description: NF4608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4608-Insertion-12
NF4608-Insertion-12
[»] chr7 (8 HSPs)
chr7 (98-178)||(42513061-42513141)
chr7 (95-178)||(30452768-30452851)
chr7 (99-178)||(30456377-30456456)
chr7 (109-178)||(11206542-11206611)
chr7 (99-172)||(49017204-49017277)
chr7 (99-173)||(41712368-41712442)
chr7 (99-140)||(6103012-6103053)
chr7 (65-96)||(30456427-30456458)
[»] chr6 (8 HSPs)
chr6 (95-178)||(13886612-13886695)
chr6 (96-178)||(7422718-7422800)
chr6 (99-178)||(4834790-4834869)
chr6 (95-178)||(7415710-7415793)
chr6 (99-178)||(7426657-7426736)
chr6 (98-178)||(33242919-33242999)
chr6 (63-96)||(7426707-7426740)
chr6 (99-132)||(16389217-16389250)
[»] chr3 (8 HSPs)
chr3 (99-178)||(36326561-36326640)
chr3 (99-178)||(14029398-14029477)
chr3 (95-143)||(19798292-19798340)
chr3 (97-143)||(19798049-19798095)
chr3 (97-143)||(18319506-18319552)
chr3 (113-155)||(32414847-32414889)
chr3 (98-133)||(1830905-1830940)
chr3 (99-130)||(30911613-30911644)
[»] chr1 (5 HSPs)
chr1 (98-178)||(23405474-23405554)
chr1 (106-178)||(9893814-9893886)
chr1 (98-175)||(18583885-18583962)
chr1 (98-175)||(21075940-21076017)
chr1 (101-133)||(13087793-13087825)
[»] chr8 (2 HSPs)
chr8 (95-178)||(44762038-44762121)
chr8 (99-178)||(44765345-44765424)
[»] chr5 (5 HSPs)
chr5 (99-178)||(41709571-41709650)
chr5 (99-178)||(8123599-8123678)
chr5 (96-178)||(10321866-10321948)
chr5 (99-140)||(24108807-24108848)
chr5 (108-178)||(671533-671603)
[»] chr4 (6 HSPs)
chr4 (99-157)||(27387712-27387770)
chr4 (96-178)||(55322331-55322413)
chr4 (95-178)||(36050734-36050817)
chr4 (99-178)||(36053993-36054072)
chr4 (101-140)||(12638119-12638158)
chr4 (99-132)||(10129632-10129665)
[»] chr2 (1 HSPs)
chr2 (98-178)||(31211884-31211964)


Alignment Details
Target: chr7 (Bit Score: 73; Significance: 1e-33; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 42513061 - 42513141
Alignment:
Q  98 atgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42513061 atgatacgacccaattcgagtagggatcacactccagaaattagagggagaaactagagaaaagagaaagaaaattcatta 42513141  T

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Target: chr7; HSP #2
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 30452851 - 30452768
Alignment:
Q  95 caaatgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  30452851 caaatgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcatta 30452768  T

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Target: chr7; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 30456456 - 30456377
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  30456456 tgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcatta 30456377  T

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Target: chr7; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 11206611 - 11206542
Alignment:
Q  109 caattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  11206611 caattcgagtagagatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcatta 11206542  T

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Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 49017277 - 49017204
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaat 172  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||| ||||||||||||| || |||||||||||    
T  49017277 tgatacgacctaattcgaatagggatcacactccataaattagagagagaaactagagataaaagaaagaaaat 49017204  T

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Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 41712442 - 41712368
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaatt-agagggagaaactagagaaaagagaaagaaaatt 173  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||| || |||||||||| || |||||| |||||    
T  41712442 tgatacgacccaattcgagtaaggatcacactccaaaaattaagagaga-aaactagagacaaaagaaaggaaatt 41712368  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 6103053 - 6103012
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaatta 140  Q
    |||||| |||||||||||||||| ||||||||||| ||||||    
T  6103053 tgatacaacccaattcgagtaggaatcacactccataaatta 6103012  T

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Target: chr7; HSP #8
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 96
Target Start/End: Complemental strand, 30456458 - 30456427
Alignment:
Q  65 tctgatactacccaattcgagtagggatcaca 96  Q
    |||||||| |||||||||||||||||||||||    
T  30456458 tctgatacgacccaattcgagtagggatcaca 30456427  T

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Target: chr6 (Bit Score: 68; Significance: 1e-30; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 13886695 - 13886612
Alignment:
Q  95 caaatgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  13886695 caaatgatacgacccaatttgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcatta 13886612  T

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Target: chr6; HSP #2
Raw Score: 67; E-Value: 5e-30
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 7422800 - 7422718
Alignment:
Q  96 aaatgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  7422800 aaatgatacgacccaattcgagtagggatcacactcaagaaattagagagagaaactagagaaaagagaaagaaaattcatta 7422718  T

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Target: chr6; HSP #3
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 4834869 - 4834790
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  4834869 tgatacgacccaatttgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcatta 4834790  T

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Target: chr6; HSP #4
Raw Score: 60; E-Value: 7e-26
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 7415793 - 7415710
Alignment:
Q  95 caaatgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    |||||||||||| |||| | ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  7415793 caaatgatacgatccaacttgagtagggatcacactccagaaattagagagagaaactagagaaaagagaaagaaaattcatta 7415710  T

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Target: chr6; HSP #5
Raw Score: 60; E-Value: 7e-26
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 7426736 - 7426657
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||  |||||| |||||||||||||||||||||||||||    
T  7426736 tgatacgacccaattcgagtagggatcacactccagaaattagaaagagaaattagagaaaagagaaagaaaattcatta 7426657  T

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Target: chr6; HSP #6
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 33242999 - 33242919
Alignment:
Q  98 atgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||| ||||||||||| | || |||||  ||||||||||    
T  33242999 atgatacgacccaattcgagtagagatcacactccagaaattagagagagaaactagaaataaaagaaaagaaattcatta 33242919  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 7426740 - 7426707
Alignment:
Q  63 tctctgatactacccaattcgagtagggatcaca 96  Q
    |||||||||| |||||||||||||||||||||||    
T  7426740 tctctgatacgacccaattcgagtagggatcaca 7426707  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 16389217 - 16389250
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactcc 132  Q
    ||||||||||||||||||||||| ||||||||||    
T  16389217 tgatacgacccaattcgagtagggatcacactcc 16389250  T

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Target: chr3 (Bit Score: 68; Significance: 1e-30; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 36326640 - 36326561
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  36326640 tgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcatta 36326561  T

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Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 14029477 - 14029398
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||| ||||||||||||||| ||||||||||| || |||||| ||||||||||||| || |||||| ||||||||||    
T  14029477 tgatacggcccaattcgagtagggatcacactccagaatttagagtgagaaactagagataaaagaaaggaaattcatta 14029398  T

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Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 19798292 - 19798340
Alignment:
Q  95 caaatgatacgacccaattcgagtaggtatcacactccaaaaattagag 143  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  19798292 caaatgatacgacccaattcgagtagggatcagactccagaaattagag 19798340  T

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Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 19798049 - 19798095
Alignment:
Q  97 aatgatacgacccaattcgagtaggtatcacactccaaaaattagag 143  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  19798049 aatgatacgacccgattcgagtagggatcacactccagaaattagag 19798095  T

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Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 18319552 - 18319506
Alignment:
Q  97 aatgatacgacccaattcgagtaggtatcacactccaaaaattagag 143  Q
    ||||||||||||| ||||||||||| ||||||||| | |||||||||    
T  18319552 aatgatacgacccgattcgagtagggatcacactctagaaattagag 18319506  T

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Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 32414889 - 32414847
Alignment:
Q  113 tcgagtaggtatcacactccaaaaattagagggagaaactaga 155  Q
    ||||||||| |||||||||||||| |||||| |||||||||||    
T  32414889 tcgagtagggatcacactccaaaatttagagagagaaactaga 32414847  T

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Target: chr3; HSP #7
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 1830940 - 1830905
Alignment:
Q  98 atgatacgacccaattcgagtaggtatcacactcca 133  Q
    ||||||||||||||||| |||||| |||||||||||    
T  1830940 atgatacgacccaattcaagtagggatcacactcca 1830905  T

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Target: chr3; HSP #8
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 30911613 - 30911644
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacact 130  Q
    ||||||||||||||||||||||| ||||||||    
T  30911613 tgatacgacccaattcgagtagggatcacact 30911644  T

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Target: chr1 (Bit Score: 65; Significance: 8e-29; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 8e-29
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 23405474 - 23405554
Alignment:
Q  98 atgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  23405474 atgatacgacccaattcaagtagggatcacactccagaatttagagggagaaactagagaaaagagaaagaaaattcatta 23405554  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 9893886 - 9893814
Alignment:
Q  106 acccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    |||||||| |||||||||||||||| || || |||| |  ||||||||||||  | |||||||||||||||||    
T  9893886 acccaatttgagtaggtatcacactgcataatttagtgaaagaaactagagatgaaagaaagaaaattcatta 9893814  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 18583885 - 18583962
Alignment:
Q  98 atgatacgacccaattcgagtaggtatcacactccaaaaatt-agagggagaaactagagaaaagagaaagaaaattca 175  Q
    |||||||||||||||||||||||  || |||||||| ||||| |||| || |||||||||| || |||||| |||||||    
T  18583885 atgatacgacccaattcgagtagagattacactccagaaattaagagaga-aaactagagataaaagaaaggaaattca 18583962  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 21075940 - 21076017
Alignment:
Q  98 atgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattca 175  Q
    ||||||||| | |||||||||||| || |||||||| || |||| | ||||||||| ||| || |||||| |||||||    
T  21075940 atgatacgatcaaattcgagtagggatgacactccagaatttagcgagagaaactacagataaaagaaaggaaattca 21076017  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 13087825 - 13087793
Alignment:
Q  101 atacgacccaattcgagtaggtatcacactcca 133  Q
    |||||||||||||||| ||||||||||||||||    
T  13087825 atacgacccaattcgaataggtatcacactcca 13087793  T

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Target: chr8 (Bit Score: 64; Significance: 3e-28; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 44762121 - 44762038
Alignment:
Q  95 caaatgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||| |||||||||||| |||||||||||    
T  44762121 caaatgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactatagaaaagagaaaaaaaattcatta 44762038  T

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Target: chr8; HSP #2
Raw Score: 60; E-Value: 7e-26
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 44765424 - 44765345
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||||| || |||||||| || |||||||||||||||| ||||||||||||||||||||||||    
T  44765424 tgatacgacccaattcgagtagggattacactccagaatttagagggagaaactatagaaaagagaaagaaaattcatta 44765345  T

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Target: chr5 (Bit Score: 60; Significance: 7e-26; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 7e-26
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 41709650 - 41709571
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||||  ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||    
T  41709650 tgatacgacccaattcgagtagagatcacactccagaatttagagggagaaactatagaaaagagaaagaaaattcatta 41709571  T

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Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 8123678 - 8123599
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||| | |||||||| || |||||||||||||||| || ||||||||||||||||||||||||    
T  8123678 tgatacgacccaattcgagtatggatcacacttcagaaattagagggagaaattaaagaaaagagaaagaaaattcatta 8123599  T

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Target: chr5; HSP #3
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 10321866 - 10321948
Alignment:
Q  96 aaatgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    |||||||||||||||||| ||||||| ||||||||||| || |||||| || || ||||||| ||||||||| ||||||||||    
T  10321866 aaatgatacgacccaatttgagtagggatcacactccataatttagagagataagctagagataagagaaaggaaattcatta 10321948  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 24108848 - 24108807
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaatta 140  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  24108848 tgatacgacccaattcgagtagggatcacactccagaaatta 24108807  T

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Target: chr5; HSP #5
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 671603 - 671533
Alignment:
Q  108 ccaattcgagtaggtatcacactccaaaaattagagggagaaa-ctagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||| || |||||||| || |||||| || |||||| ||||||| || |||||||||||||||||    
T  671603 ccaattcgagttgggatcacacttcagaaatta-agagagaaagctagagataaaagaaagaaaattcatta 671533  T

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Target: chr4 (Bit Score: 47; Significance: 4e-18; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 27387770 - 27387712
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagaga 157  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  27387770 tgatacgacccaattcgagtagggatcacactccagaatttagagggagaaactagaga 27387712  T

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Target: chr4; HSP #2
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 55322331 - 55322413
Alignment:
Q  96 aaatgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||| | |||| ||||||| || |||||| ||||||||||    
T  55322331 aaatgatacgacccaattcgagtagggatcacactccagaatttagaagtagaagctagagataaaagaaaggaaattcatta 55322413  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 36050817 - 36050734
Alignment:
Q  95 caaatgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| | |   |||||||||| || |||||  ||||||||||    
T  36050817 caaatgatacgacccaattcgagtagggatcacactccaaaaattaaaagagaaaactagagataaaagaaaagaaattcatta 36050734  T

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Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 36054072 - 36053993
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactccaaaaattagagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||||||||||||||||| |||||||||||||||||| | |   |||||||||| || |||||  ||||||||||    
T  36054072 tgatacgacccaattcgagtagggatcacactccaaaaattaaaagagaaaactagagataaaagaaaagaaattcatta 36053993  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 140
Target Start/End: Complemental strand, 12638158 - 12638119
Alignment:
Q  101 atacgacccaattcgagtaggtatcacactccaaaaatta 140  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  12638158 atacgacccaattcgagtaggtatcgcactccagaaatta 12638119  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 10129632 - 10129665
Alignment:
Q  99 tgatacgacccaattcgagtaggtatcacactcc 132  Q
    ||||||||||||||||||||||| ||||||||||    
T  10129632 tgatacgacccaattcgagtagggatcacactcc 10129665  T

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Target: chr2 (Bit Score: 42; Significance: 0.000000000000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 31211964 - 31211884
Alignment:
Q  98 atgatacgacccaattcgagtaggtatcacactccaaaaatt-agagggagaaactagagaaaagagaaagaaaattcatta 178  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| |||| || |||||||||| || |||||||||||||||||    
T  31211964 atgatacgatccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaagaaaattcatta 31211884  T

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