View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4608-Insertion-8 (Length: 685)
Name: NF4608-Insertion-8
Description: NF4608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4608-Insertion-8 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 8 - 338
Target Start/End: Complemental strand, 7341310 - 7340980
Alignment:
| Q |
8 |
cataaaaccctagctaactaacttaagcattgatttcattgaaggtacacaccaaccccaacatagttgcaaatttttagaagcgctacgatgggtgatt |
107 |
Q |
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| T |
7341310 |
cataaaaccctagctaactaacttaagcattgatttcattgaaggtacacaccaaccccaacatagttgcaaatttttagaagcgctacgatgggtaatt |
7341211 |
T |
|
| Q |
108 |
ctaccttattcaaatgaatagtctttcaacaaaacacatatatcccaaaatacacctttattttcatacactcattcgacatcttgttttttctctatcg |
207 |
Q |
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| T |
7341210 |
ctaccttattcaaatgaatagtctttcaacaaaacacatatatctcaaaatacacctttattttcatacactcattcgacatcttgttttttctctatcg |
7341111 |
T |
|
| Q |
208 |
acatcttccgatcagatcacgaacctatcacaattatcaatttactccatttgtttctctatctctaatgataaattagatattggatctaattataaga |
307 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |
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| T |
7341110 |
acatcttccgattagatcacgaacctatcacaattatcaatttactccatttgtttctctatctctaatggtaaattagatattagatctaattataaga |
7341011 |
T |
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| Q |
308 |
attattttccattttaaaaaactgagtatgc |
338 |
Q |
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| T |
7341010 |
attattttccattttaaaaaactgagtatgc |
7340980 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 481 - 602
Target Start/End: Complemental strand, 7340860 - 7340739
Alignment:
| Q |
481 |
cactgtttcatcgtaatatatgtgtctgtttgtctgtgtcagtcaaacagccacctttcctataagctcaaaaaacagcttttgatcgacctaatgtttg |
580 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
7340860 |
cactgtttaatcgtaatatatgtgtctgtttgtctgtgtcagtcaaacagccacctttcccataagctcaaaaaacagcttttgatcgacctaatgtttg |
7340761 |
T |
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| Q |
581 |
ttcttttttgcattttccactg |
602 |
Q |
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| T |
7340760 |
ttcttttttgcattttccactg |
7340739 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 685
Target Start/End: Complemental strand, 7340707 - 7340658
Alignment:
| Q |
636 |
aaacaaccctcagaacaggctcctccgacaataacagacgaaccaaatat |
685 |
Q |
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||||||||||||||||| ||||||| |||||||||||||||||||||||| |
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| T |
7340707 |
aaacaaccctcagaacatgctcctctgacaataacagacgaaccaaatat |
7340658 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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