View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4609_high_3 (Length: 241)
Name: NF4609_high_3
Description: NF4609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4609_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 409429 - 409663
Alignment:
| Q |
1 |
aaaaaccaacgatcttggtcgccgagaaactcggagaagcagggctacaagtgttaagacaattaggacatgtggaatgtgcttatgatctttcaccaga |
100 |
Q |
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| T |
409429 |
aaaaaccaacgatcttggtctccgagaaactaggagaagcagggctacaagtgttaagacaattaggaaatgtggaatgtgcatatgatctttcaccaga |
409528 |
T |
|
| Q |
101 |
agacctatgcaagaagatctcaagctgtgatgctttgattgtgagaagcggtacgaaagttacaaggcaagtgtttgaagcaggaaaaggaaagttgaaa |
200 |
Q |
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| T |
409529 |
agacctatgcaagaagatctcaagctgtgatgctttgattgtgagaagcggtacgaaagttacaaggaaagtgtttgaagcagggaaaggaaagttgaaa |
409628 |
T |
|
| Q |
201 |
gttgttggtagagctggtgttgggattgatgatgt |
235 |
Q |
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|||||||||||||||||||||||||||||| |||| |
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| T |
409629 |
gttgttggtagagctggtgttgggattgataatgt |
409663 |
T |
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