View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4610-Insertion-1 (Length: 945)

Name: NF4610-Insertion-1
Description: NF4610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4610-Insertion-1
NF4610-Insertion-1
[»] chr7 (5 HSPs)
chr7 (10-628)||(6002611-6003229)
chr7 (682-919)||(6003283-6003528)
chr7 (727-821)||(2570114-2570208)
chr7 (729-829)||(27993561-27993661)
chr7 (737-829)||(46262144-46262236)
[»] chr8 (6 HSPs)
chr8 (727-907)||(38387872-38388059)
chr8 (730-919)||(46153-46351)
chr8 (728-865)||(1579093-1579231)
chr8 (727-829)||(40531188-40531288)
chr8 (727-829)||(544375-544477)
chr8 (82-153)||(31034300-31034371)
[»] chr4 (5 HSPs)
chr4 (727-907)||(26500215-26500402)
chr4 (727-864)||(1799100-1799237)
chr4 (726-864)||(10388514-10388652)
chr4 (729-814)||(37707395-37707480)
chr4 (727-851)||(40813783-40813908)
[»] chr3 (9 HSPs)
chr3 (729-864)||(45181550-45181685)
chr3 (727-858)||(16285020-16285151)
chr3 (728-919)||(17324084-17324283)
chr3 (727-829)||(2782094-2782196)
chr3 (729-829)||(3968575-3968675)
chr3 (729-829)||(4000130-4000230)
chr3 (735-819)||(18983225-18983309)
chr3 (24-73)||(27645675-27645724)
chr3 (769-822)||(30127258-30127311)
[»] chr1 (5 HSPs)
chr1 (727-896)||(38709907-38710081)
chr1 (774-907)||(4397410-4397550)
chr1 (727-864)||(4391561-4391698)
chr1 (728-823)||(38564857-38564951)
chr1 (729-829)||(13987577-13987677)
[»] chr2 (6 HSPs)
chr2 (741-907)||(4397370-4397543)
chr2 (728-864)||(37128913-37129049)
chr2 (727-896)||(41958187-41958361)
chr2 (727-829)||(42048241-42048343)
chr2 (728-823)||(4162051-4162145)
chr2 (749-819)||(23665439-23665509)
[»] chr5 (9 HSPs)
chr5 (728-864)||(42742326-42742461)
chr5 (741-864)||(39368830-39368953)
chr5 (727-907)||(35847051-35847239)
chr5 (727-864)||(3204238-3204374)
chr5 (735-851)||(2707023-2707139)
chr5 (775-864)||(29685828-29685917)
chr5 (727-814)||(18557491-18557577)
chr5 (818-864)||(25362318-25362364)
chr5 (784-822)||(31721688-31721726)
[»] chr6 (1 HSPs)
chr6 (729-829)||(7546454-7546554)


Alignment Details
Target: chr7 (Bit Score: 492; Significance: 0; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 10 - 628
Target Start/End: Original strand, 6002611 - 6003229
Alignment:
Q  10 tagcggtgctggtactttcgtgggttattcgtgaacttggctccgctgtatatagcaaagctcttttgtttttcatattttctttcctcaatgtctttgt 109  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6002611 tagcggtgctagtactttcgtgggttattcgtgaacttggctccgctgtatatagcaaagctcttttgtttttcatattttctttcctcaatgtctttgt 6002710  T
Q  110 attctttcgtgcacaacaagtatcccttgagtaaccaatagcattgacacaggnnnnnnnnngtgagtctttcatattgtatatccttattaaaggcata 209  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||||||| |||||    
T  6002711 attctttcgtgcacaacaagtatcccttgagtaaccaatagcat-gacacaggaaaaaaaaagtgagtctttcatattgtatatccttattaaaagcata 6002809  T
Q  210 gccatctcgttcaacaagaaggaattcttgcagatcaagatccactcagattctagtatattatccataaagcctac---tactagtagcttccaaaagg 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||   ||||||||||||||||||||    
T  6002810 gccatctcgttcaacaagaaggaattcttgcagatcaagatccactcagattctagtataatatccataaaatctactactactagtagcttccaaaagg 6002909  T
Q  307 acaagatggattcaaataccttgcgactgcaaaataacagaattaatgacctccaatattcgataggaagaccaagaattctaacctaacgttggacatt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  6002910 acaagatggattcaaataccttgcgactgcaaaataacagaattaatgacctccaatattcaataggaagaccaagaattctaacttaacgttggacatt 6003009  T
Q  407 agtatttttaatcaaatgcggattgaagtctagtgtctaagaaaaatgagtgaagaataccttgagaaagactccattattctaccgcaatcacccttat 506  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6003010 agtgtttttaatcaaatgcggattgaagtctagtgtctaagaaaaatgagtgaagaataccttgagaaagactcacttattctaccgcaatcacccttat 6003109  T
Q  507 taggtttcaataaatgaaaatgaaaagnnnnnnnnnnncttaccaataggtgtaagcgatcattttccaagaacgttccaaagagcgtttagctttgtgt 606  Q
    ||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6003110 taggtttcaataaatgaaaatgaaaa--aaaaaaaaaacttaccaataggtgtaagcgatcattttccaagaacgttccaaagagcgtttagctttgtgt 6003207  T
Q  607 gtagggcatcaattgttagaga 628  Q
    ||||||||||||||||||||||    
T  6003208 gtagggcatcaattgttagaga 6003229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 682 - 919
Target Start/End: Original strand, 6003283 - 6003528
Alignment:
Q  682 gatactactacgtcccattgaaacaaggagaaggaaataacttaaaaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtca 781  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  6003283 gatactactacgtcccattgaaacaaggagaaggaagtaacttaaaaggtgtctgctccggtggtttgtgaattgagtgatgcctttttgatttgtgtca 6003382  T
Q  782 ggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtttgtgtctcaggttcttctaggctattgtgatgtc-tctc----agactg-aac 875  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| |||||| ||||||||||  |||    |||||| |||    
T  6003383 ggagtcttatgggccgatcgcttttgattcgaggtcggaagcaaatttgtgtctcaggtccttttaggctgttgtgatgtcgcctccgatagactgaaac 6003482  T
Q  876 ttgagtggtggtcgaagctg-acgtttgaagc-acatcactatcag 919  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||    
T  6003483 ttgagtggtggtcgaagctgaacgtttgaagcaacatcaatatcag 6003528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 727 - 821
Target Start/End: Original strand, 2570114 - 2570208
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcggga 821  Q
    ||||||||||||| ||| | | |||||||||| | ||||||||||| |||||||||||||||  |||||  ||||||||||||||||||||||||    
T  2570114 aaggtgtttgctctggttgctcgtgagttgaggggtgcctttttgacttgtgtcaggagtctggtgggcttatcgcttttgattcgaggtcggga 2570208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 729 - 829
Target Start/End: Complemental strand, 27993661 - 27993561
Alignment:
Q  729 ggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtt 828  Q
    ||||||||||| ||||||| |||||||||| | || |||| ||||||||||| |||||||  ||| |||||| ||||||||||||| |||||||| ||||    
T  27993661 ggtgtttgctctggtggttcgtgagttgaggggtgtctttatgatttgtgtcgggagtctggtggaccgatcacttttgattcgagatcgggagctagtt 27993562  T
Q  829 t 829  Q
    |    
T  27993561 t 27993561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 829
Target Start/End: Complemental strand, 46262236 - 46262144
Alignment:
Q  737 ctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagttt 829  Q
    |||||||| || |||||||||| | ||||||||||||| ||||  |||||||  |||||||||| ||||||||||||| |||||||| |||||    
T  46262236 ctccggtgattcgtgagttgaggggtgcctttttgattggtgttgggagtctggtgggccgatcacttttgattcgagatcgggagctagttt 46262144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 8e-39; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 727 - 907
Target Start/End: Original strand, 38387872 - 38388059
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||||||||| ||||||| |||||||||| | ||||||||||| || |||| |||||||| |||||| ||| |||||||||| ||||| ||||||||    
T  38387872 aaggtgtttgctctggtggttcgtgagttgaggggtgcctttttgacttatgtcgggagtcttgtgggccaatcacttttgattcaaggtcaggagcaag 38387971  T
Q  827 tttgtgtctcaggttcttctaggctattgtgatgtctc-tc----agact-gaacttgagtggtggtcgaagctg-acgtttgaagca 907  Q
    |||||| ||||||| ||| ||||||||||||||||||| ||    ||||| | |||||||||||||||||||||| ||||||||||||    
T  38387972 tttgtgactcaggtccttttaggctattgtgatgtctcatctgatagactaggacttgagtggtggtcgaagctgaacgtttgaagca 38388059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 730 - 919
Target Start/End: Complemental strand, 46351 - 46153
Alignment:
Q  730 gtgtttgctccggtggttt-gtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtt 828  Q
    |||| ||||||||||| || |||||||||| | ||||||||||| ||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  46351 gtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattccaggtcgggagcaagtt 46252  T
Q  829 tgtgtctcaggttcttctaggctattgtgatgtct-ctc----agact-gaacttgagtggtggtcgaagctg-acgtttgaagc-acatcactatcag 919  Q
    | || ||||||| ||| |||| | ||||||||||| |||    ||||| ||||||||||||||||| ||| || ||||||||||| | |||||||||||    
T  46251 tctgactcaggtccttttaggttgttgtgatgtctcctccgatagactggaacttgagtggtggtcaaagttgaacgtttgaagcaaaatcactatcag 46153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 728 - 865
Target Start/End: Original strand, 1579093 - 1579231
Alignment:
Q  728 aggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagt 827  Q
    |||||| ||||| ||||||| |||||||||| ||||||| ||| | ||||||  |||||||| |||||||||| |||||||||| | |||||||||||||    
T  1579093 aggtgtctgctctggtggttcgtgagttgagggatgcctcttttacttgtgttgggagtcttgtgggccgatcacttttgattcaaagtcgggagcaagt 1579192  T
Q  828 -ttgtgtctcaggttcttctaggctattgtgatgtctct 865  Q
     ||||| ||||||| |||||||| | |||||||||||||    
T  1579193 cttgtgactcaggtccttctaggttgttgtgatgtctct 1579231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 727 - 829
Target Start/End: Original strand, 40531188 - 40531288
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| ||||| ||||| |  ||||||||| | |||| |||||||||||||||  ||||| ||||||||||| ||||||||||||| |||||||| ||    
T  40531188 aaggtgtctgctctggtgggtcttgagttgaggggtgccgttttgatttgtgtca--agtctgatgggccgatcacttttgattcgagatcgggagctag 40531285  T
Q  827 ttt 829  Q
    |||    
T  40531286 ttt 40531288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 727 - 829
Target Start/End: Complemental strand, 544477 - 544375
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| ||||| ||||| |||||||||||  |||||| |||||||||||||| |||||||  |||| ||||| |||| |||||||| |||| ||| ||    
T  544477 aaggtgtctgctctggtggattgtgagttgacggatgccgttttgatttgtgtcgggagtctggtgggtcgatcactttagattcgagatcggaagctag 544378  T
Q  827 ttt 829  Q
    |||    
T  544377 ttt 544375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 31034300 - 31034371
Alignment:
Q  82 tcatattttctttcctcaatgtctttgtattctttcgtgcacaacaagtatcccttgagtaaccaatagcat 153  Q
    ||||||||||||||||   || ||||||||||||| |||||| |||  |||||||||||| | |||||||||    
T  31034300 tcatattttctttccttggtgcctttgtattcttttgtgcacgacagttatcccttgagtgatcaatagcat 31034371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 5e-37; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 727 - 907
Target Start/End: Complemental strand, 26500402 - 26500215
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| |||||  |||||| |||||||||| | ||||||||||| ||||||| | |||||| |||| |||||||||||||||||||||||||||||||    
T  26500402 aaggtgtatgctctagtggttcgtgagttgaggggtgcctttttgacttgtgtcggaagtcttgtgggtcgatcgcttttgattcgaggtcgggagcaag 26500303  T
Q  827 tttgtgtctcaggttcttctaggctattgtgatgtct-ctcaga-----ctgaacttgagtggtggtcgaagctg-acgtttgaagca 907  Q
    |||||| |||| || ||| |||||| ||||||||||| ||| ||     | |||||||||||||||||||||||| ||||||||||||    
T  26500302 tttgtgactcaagtccttttaggctgttgtgatgtctcctccgatagaccggaacttgagtggtggtcgaagctgaacgtttgaagca 26500215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 727 - 864
Target Start/End: Original strand, 1799100 - 1799237
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| ||||||||||||| |||||||||| | ||||||||||| |||||| ||||||||| | | || | |||||||||||| ||||| ||||||||    
T  1799100 aaggtgtctgctccggtggttcgtgagttgaggggtgcctttttgacttgtgtaaggagtcttgttgaccaaacgcttttgattctaggtcaggagcaag 1799199  T
Q  827 tttgtgtctcaggttcttctaggctattgtgatgtctc 864  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  1799200 tttgtgtctcaggtccttttaggctattgtgatgtctc 1799237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 726 - 864
Target Start/End: Original strand, 10388514 - 10388652
Alignment:
Q  726 aaaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaa 825  Q
    |||||||| |||||  ||| || |||||||||| |||| |||||||| ||| |||  ||||||| |||||||||| ||||||||||||||||||||||||    
T  10388514 aaaggtgtctgctctagtgcttcgtgagttgagggatgtctttttgacttgcgtcgagagtcttgtgggccgatcacttttgattcgaggtcgggagcaa 10388613  T
Q  826 gtttgtgtctcaggttcttctaggctattgtgatgtctc 864  Q
    |||| || ||||||| ||| |||||| ||||||||||||    
T  10388614 gtttatgactcaggtccttttaggctgttgtgatgtctc 10388652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 729 - 814
Target Start/End: Complemental strand, 37707480 - 37707395
Alignment:
Q  729 ggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgag 814  Q
    ||||| ||||| ||||||| |||||||||| | |||||||||| | |||||| |||||||  |||||||||| |||||||||||||    
T  37707480 ggtgtctgctctggtggttcgtgagttgaggggtgcctttttgctatgtgtcgggagtctggtgggccgatcacttttgattcgag 37707395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 727 - 851
Target Start/End: Complemental strand, 40813908 - 40813783
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggag-caa 825  Q
    ||||||| |||||  |||||| |||| ||||  | ||||||| ||||||| ||| |||||||  |||||||||| ||||||||||||| ||||||| |||    
T  40813908 aaggtgtctgctctagtggttcgtgaattgaagggtgcctttatgatttgcgtcgggagtctggtgggccgatcacttttgattcgagatcgggagccaa 40813809  T
Q  826 gtttgtgtctcaggttcttctaggct 851  Q
     ||| || ||||||||||| ||||||    
T  40813808 ttttttgactcaggttcttttaggct 40813783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 1e-34; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 729 - 864
Target Start/End: Original strand, 45181550 - 45181685
Alignment:
Q  729 ggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtt 828  Q
    ||||| ||||| ||||||| |||||||||| | ||||||||||| || |||| |||||||| |||||| |||||||||||||||||||||| ||||||||    
T  45181550 ggtgtctgctctggtggttcgtgagttgaggggtgcctttttgacttttgtcgggagtcttgtgggccaatcgcttttgattcgaggtcggaagcaagtt 45181649  T
Q  829 tgtgtctcaggttcttctaggctattgtgatgtctc 864  Q
    |||| ||||||| ||| |||||| ||||||||||||    
T  45181650 tgtgactcaggtccttttaggctgttgtgatgtctc 45181685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 727 - 858
Target Start/End: Original strand, 16285020 - 16285151
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| |||||  |||||| |||||||||| | ||||||||||| | ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  16285020 aaggtgtctgctcttgtggttcgtgagttgaggggtgcctttttgactagtgtctggagtcttgtgggccgatcgcttttgattcgaggtcgggagcaag 16285119  T
Q  827 tttgtgtctcaggttcttctaggctattgtga 858  Q
    |||| | ||||||| ||| |||||| ||||||    
T  16285120 tttgcgactcaggtccttttaggctgttgtga 16285151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 728 - 919
Target Start/End: Complemental strand, 17324283 - 17324084
Alignment:
Q  728 aggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagt 827  Q
    |||||| | ||||||||||| |||||||||| | ||||||||| | || ||||  ||||||| |||||||||| ||||||||||||||||||||||||||    
T  17324283 aggtgtctactccggtggttcgtgagttgaggggtgccttttttacttatgtcgtgagtcttgtgggccgatctcttttgattcgaggtcgggagcaagt 17324184  T
Q  828 ttgtgtctcaggttcttctaggctattgtgatgtct-ctc----agact-gaacttgagtggtggtcgaagctg-acgtttgaagc-acatcactatcag 919  Q
    || || || |||| ||| || ||||||||||||||| |||    | ||| ||||| |||||||||||||||||| ||||||||||| | |||||||||||    
T  17324183 ttctgacttaggtccttttaagctattgtgatgtctcctccgatatactggaactagagtggtggtcgaagctgaacgtttgaagcaaaatcactatcag 17324084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 727 - 829
Target Start/End: Complemental strand, 2782196 - 2782094
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| ||||| |||||||||||||||||| | ||||||  |||||||||||  ||||||  |||| ||||| |||||||||  || |||||||| ||    
T  2782196 aaggtgtctgctctggtggtttgtgagttgaggggtgccttaatgatttgtgtcgagagtctggtgggacgatcacttttgattttagatcgggagccag 2782097  T
Q  827 ttt 829  Q
    |||    
T  2782096 ttt 2782094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 729 - 829
Target Start/End: Complemental strand, 3968675 - 3968575
Alignment:
Q  729 ggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtt 828  Q
    ||||| ||||| ||||||| |||||||||| | ||||||  ||||||||||| |||||||  ||| || |||||||||| |||||| || ||||| ||||    
T  3968675 ggtgtctgctctggtggttcgtgagttgaggggtgccttgatgatttgtgtcgggagtctggtggaccaatcgcttttgcttcgagatcaggagctagtt 3968576  T
Q  829 t 829  Q
    |    
T  3968575 t 3968575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 729 - 829
Target Start/End: Original strand, 4000130 - 4000230
Alignment:
Q  729 ggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtt 828  Q
    ||||| ||||| ||||||| |||||||||| | ||||||  ||||||||||| |||||||  ||| || |||||||||| |||||| || ||||| ||||    
T  4000130 ggtgtctgctctggtggttcgtgagttgaggggtgccttgatgatttgtgtcgggagtctggtggaccaatcgcttttgcttcgagatcaggagctagtt 4000229  T
Q  829 t 829  Q
    |    
T  4000230 t 4000230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 735 - 819
Target Start/End: Original strand, 18983225 - 18983309
Alignment:
Q  735 tgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgg 819  Q
    ||||| ||||| |||||||||||||| |||||| ||||| ||||||  |||||| |||| ||||||  || ||||||||| ||||    
T  18983225 tgctctggtgggttgtgagttgagtggtgccttattgatctgtgtcgagagtctgatggaccgatcaattatgattcgagatcgg 18983309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 27645724 - 27645675
Alignment:
Q  24 ctttcgtgggttattcgtgaacttggctccgctgtatatagcaaagctct 73  Q
    ||||||||||||||| ||||| |||||| ||||  |||||||||||||||    
T  27645724 ctttcgtgggttatttgtgaatttggcttcgctacatatagcaaagctct 27645675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 769 - 822
Target Start/End: Original strand, 30127258 - 30127311
Alignment:
Q  769 ttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggag 822  Q
    ||||||||| || |||||||  || ||||||||||||||||||||| |||||||    
T  30127258 ttgatttgtttcgggagtctggtgagccgatcgcttttgattcgagatcgggag 30127311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 3e-32; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 727 - 896
Target Start/End: Original strand, 38709907 - 38710081
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    |||||||||| || ||||||| |||||||||| | ||||||||||  |||| || |||||||| ||||| ||||||||||||||||||||||||||||||    
T  38709907 aaggtgtttgttctggtggttcgtgagttgaggggtgcctttttgccttgtttcgggagtctt-tgggctgatcgcttttgattcgaggtcgggagcaag 38710005  T
Q  827 tttgtgtctcaggttcttctaggctattgtgatgtct-ctcaga-----ctgaacttgagtggtggtcgaagctga 896  Q
    |||||| ||||||| ||| |||| | ||||||||||| ||| ||     | |||||||||||||||||||||||||    
T  38710006 tttgtgactcaggtccttttaggatgttgtgatgtctcctccgatagaccggaacttgagtggtggtcgaagctga 38710081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 774 - 907
Target Start/End: Complemental strand, 4397550 - 4397410
Alignment:
Q  774 ttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtttgtgtctcaggttcttctaggctattgtgatgtct-ctcaga--- 869  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||| ||| |||||| ||||||||||| ||| ||       
T  4397550 ttgtgtcgggagtcttatgtgccgatcgcttttgattcgagttcgggagtaagtttgtgactcaggtccttttaggctgttgtgatgtctcctccgatag 4397451  T
Q  870 --ctgaacttgagtggtggtcgaagctg-acgtttgaagca 907  Q
      | || ||||||||||||||||||||| ||||||||||||    
T  4397450 accggatcttgagtggtggtcgaagctgaacgtttgaagca 4397410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 727 - 864
Target Start/End: Original strand, 4391561 - 4391698
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| || || ||||||| |||||||||| | ||| ||||||  ||||||| |||||||| |||||| ||||||||||||||| |||||||||||||    
T  4391561 aaggtgtctgttctggtggttcgtgagttgaggggtgcatttttgccttgtgtcgggagtcttgtgggccaatcgcttttgattcggggtcgggagcaag 4391660  T
Q  827 -tttgtgtctcaggttcttctaggctattgtgatgtctc 864  Q
     |||||| |||||| |||| |||||| ||||||||||||    
T  4391661 ttttgtgactcagg-tcttttaggctgttgtgatgtctc 4391698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 728 - 823
Target Start/End: Original strand, 38564857 - 38564951
Alignment:
Q  728 aggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagc 823  Q
    |||||||||||| | ||| | |||||||||| | |||||||| ||||||||| ||||||||  |||||||||||||||||||||||| ||||||||    
T  38564857 aggtgtttgctcagatgggtcgtgagttgaggggtgcctttt-gatttgtgttaggagtctcgtgggccgatcgcttttgattcgagatcgggagc 38564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 729 - 829
Target Start/End: Original strand, 13987577 - 13987677
Alignment:
Q  729 ggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtt 828  Q
    ||||| ||||| ||||||| |||||||||| | ||||||  ||||||||||| ||| |||  |||||| |||||||||| |||||| |||||||| ||||    
T  13987577 ggtgtctgctctggtggttcgtgagttgaggggtgccttgatgatttgtgtcgggaatctggtgggccaatcgcttttgcttcgagatcgggagctagtt 13987676  T
Q  829 t 829  Q
    |    
T  13987677 t 13987677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 5e-31; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 741 - 907
Target Start/End: Complemental strand, 4397543 - 4397370
Alignment:
Q  741 ggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtttgtgtctcaggt 840  Q
    ||||||| |||||||||| | |||| |||||| || | || |||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  4397543 ggtggttcgtgagttgaggggtgccattttgacttctctcgggagtcttgtgggctgatcgcttttgattcgaggtcgggagcaagtttgtgactcaggt 4397444  T
Q  841 tcttctaggctattgtgatgtct-ctcaga-----ctgaacttgagtggtggtcgaagctg-acgtttgaagca 907  Q
     ||| |||| | ||||||||||| ||| ||     | |||||||||||||||||||||||| ||||||||||||    
T  4397443 ccttttaggttgttgtgatgtctcctccgaaagaccggaacttgagtggtggtcgaagctgtacgtttgaagca 4397370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 728 - 864
Target Start/End: Complemental strand, 37129049 - 37128913
Alignment:
Q  728 aggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagt 827  Q
    |||||| ||||| ||||||| |||||||||  | ||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  37129049 aggtgtctgctctggtggttcgtgagttgataggtgcctttttgacttgtgttaggagtcttgtgggccgatcgcttttgattcgaggtccggaacaagt 37128950  T
Q  828 ttgtgtctcaggttcttctaggctattgtgatgtctc 864  Q
    ||||| |||| || |||  ||| | ||||||||||||    
T  37128949 ttgtgactcaagtcctttcaggatgttgtgatgtctc 37128913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 727 - 896
Target Start/End: Original strand, 41958187 - 41958361
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||||||||||| | |||||| | |||||||||||||||||| ||||||    
T  41958187 aaggtgtctgctctggtggtttgtgagttgaagggtgcctttttgacttgtgtcaggagtcttgt-ggccgaccacttttgattcgaggtcggaagcaag 41958285  T
Q  827 tttgtgtctcaggttcttctaggctattgtgatgtct-ctc----agactg-aacttgagtggtggtcgaagctga 896  Q
    |||||| ||||||| ||| ||| || |||| | |||| |||    |||| | ||||||||||||||||||||||||    
T  41958286 tttgtgactcaggtccttttagtctgttgtaacgtctcctctgatagaccgaaacttgagtggtggtcgaagctga 41958361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 727 - 829
Target Start/End: Complemental strand, 42048343 - 42048241
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| ||||| ||||||| |||||||||| | |||||| ||||||| |||| ||||||  |||||| |||| |||||||||||||  ||||||| ||    
T  42048343 aaggtgtctgctctggtggttcgtgagttgagaggtgccttgttgatttctgtcgggagtccgatgggctgatcacttttgattcgagaccgggagccag 42048244  T
Q  827 ttt 829  Q
    |||    
T  42048243 ttt 42048241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 728 - 823
Target Start/End: Complemental strand, 4162145 - 4162051
Alignment:
Q  728 aggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagc 823  Q
    |||||| ||||| ||||||| | |||||||| | |||||  | |||||||||  |||||||  |||||||||| ||||||||||||| ||||||||    
T  4162145 aggtgtatgctctggtggttcgagagttgaggggtgcctagt-gatttgtgttgggagtctggtgggccgatcacttttgattcgagatcgggagc 4162051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 749 - 819
Target Start/End: Complemental strand, 23665509 - 23665439
Alignment:
Q  749 gtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgg 819  Q
    |||||||||| | |||| |||| |||||| || |||||||  |||||||||| ||||||||||||| ||||    
T  23665509 gtgagttgaggggtgccatttttatttgtatcgggagtctagtgggccgatcacttttgattcgagatcgg 23665439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 2e-30; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 728 - 864
Target Start/End: Complemental strand, 42742461 - 42742326
Alignment:
Q  728 aggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagt 827  Q
    |||||| ||||| ||||||| ||| |||| | | ||||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  42742461 aggtgtctgctctggtggttcgtgggttgtggggtgcctttttgacttgtgtcgggagtcttgtgggc-gatcgcttttgattcgaggtcgggagcaagt 42742363  T
Q  828 ttgtgtctcaggttcttctaggctattgtgatgtctc 864  Q
    ||||| |||| || ||| |||||| ||||||||||||    
T  42742362 ttgtgactcatgtccttttaggctgttgtgatgtctc 42742326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 741 - 864
Target Start/End: Original strand, 39368830 - 39368953
Alignment:
Q  741 ggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtttgtgtctcaggt 840  Q
    ||||||| |||||||||| | || |||||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||    
T  39368830 ggtggttcgtgagttgagaggtgtctttttgacttgtgtcgggagtcttgtgggccgaccgcttttgattcgaggtcgggagcaagtttttgactcaggt 39368929  T
Q  841 tcttctaggctattgtgatgtctc 864  Q
    |||| |||| | ||||| ||||||    
T  39368930 tcttttaggttgttgtgttgtctc 39368953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 727 - 907
Target Start/End: Original strand, 35847051 - 35847239
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgccttttt-gatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaa 825  Q
    ||||||| ||||| |||||||||||||||||  | ||||||||| || ||||||| ||||| || ||||||||||| ||||||||||||||||||||||     
T  35847051 aaggtgtctgctctggtggtttgtgagttgatgggtgccttttttgacttgtgtcgggagttttgtgggccgatcgattttgattcgaggtcgggagcac 35847150  T
Q  826 gtttgtgtctcaggttcttctaggctattgtgatgtct-ctcaga-----ctgaacttgagtggtggtcgaagctg-acgtttgaagca 907  Q
    ||||||| ||| ||| ||| ||||||  |||||||||| ||| ||     | | |||||||||||||||||||||| ||||||||||||    
T  35847151 gtttgtgactcgggtccttttaggctgctgtgatgtctcctccgatagaccgggacttgagtggtggtcgaagctgaacgtttgaagca 35847239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 727 - 864
Target Start/End: Original strand, 3204238 - 3204374
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaag 826  Q
    ||||||| ||||| ||||| | |||||||||| | ||||||||| | ||||||||| |||||| ||| || |||| ||||||||||||||||||||||||    
T  3204238 aaggtgtatgctctggtggctcgtgagttgaggggtgcctttttaacttgtgtcag-agtcttgtggaccaatcgtttttgattcgaggtcgggagcaag 3204336  T
Q  827 tttgtgtctcaggttcttctaggctattgtgatgtctc 864  Q
    |||||| || || ||||| |||||| ||||||||||||    
T  3204337 tttgtgacttagattcttttaggctgttgtgatgtctc 3204374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 735 - 851
Target Start/End: Original strand, 2707023 - 2707139
Alignment:
Q  735 tgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtttgtgtc 834  Q
    ||||||||||||| |||||||||| | ||| ||  ||| ||||||| |||||||  ||  |||||| |||||||||||||||||||||| |||||||| |    
T  2707023 tgctccggtggttcgtgagttgaggggtgctttaatgacttgtgtcgggagtctagtgaaccgatcacttttgattcgaggtcgggagctagtttgtgac 2707122  T
Q  835 tcaggttcttctaggct 851  Q
    ||| || ||| ||||||    
T  2707123 tcatgtccttttaggct 2707139  T

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Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 775 - 864
Target Start/End: Original strand, 29685828 - 29685917
Alignment:
Q  775 tgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtttgtgtctcaggttcttctaggctattgtgatgtctc 864  Q
    |||||| ||||||| ||||| ||||| |||||||||||| ||||||||| |||||||| ||||| | ||| |||||| |||||| |||||    
T  29685828 tgtgtcgggagtctaatgggtcgatcacttttgattcgaagtcgggagctagtttgtgactcagatccttttaggcttttgtgaagtctc 29685917  T

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Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 727 - 814
Target Start/End: Original strand, 18557491 - 18557577
Alignment:
Q  727 aaggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgag 814  Q
    ||||||| | ||| ||||| | |||||||||| | |||| |||||||||||||| |||||| |||||||||||| |||||||||||||    
T  18557491 aaggtgtctactctggtgggtcgtgagttgaggggtgccgttttgatttgtgtcgggagtc-tatgggccgatcacttttgattcgag 18557577  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 818 - 864
Target Start/End: Original strand, 25362318 - 25362364
Alignment:
Q  818 gggagcaagtttgtgtctcaggttcttctaggctattgtgatgtctc 864  Q
    ||||||||||||||| ||||||| ||| |||||| ||||||||||||    
T  25362318 gggagcaagtttgtgactcaggtccttttaggctgttgtgatgtctc 25362364  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 784 - 822
Target Start/End: Original strand, 31721688 - 31721726
Alignment:
Q  784 agtcttatgggccgatcgcttttgattcgaggtcgggag 822  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  31721688 agtctaatgggccgatcgcttttgattcgagatcgggag 31721726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 729 - 829
Target Start/End: Complemental strand, 7546554 - 7546454
Alignment:
Q  729 ggtgtttgctccggtggtttgtgagttgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattcgaggtcgggagcaagtt 828  Q
    ||||| ||||| ||||||| |||||||||| | ||||||||| ||| ||||   ||||||  ||| |||||| ||||||||||||| |||| ||| ||||    
T  7546554 ggtgtctgctctggtggttcgtgagttgaggggtgccttttttattggtgttgagagtctggtggaccgatcacttttgattcgagatcggaagctagtt 7546455  T
Q  829 t 829  Q
    |    
T  7546454 t 7546454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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