View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4611-Insertion-4 (Length: 59)
Name: NF4611-Insertion-4
Description: NF4611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4611-Insertion-4 |
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| [»] chr7 (1 HSPs) |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 52; Significance: 1e-21; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-21
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 36419013 - 36418962
Alignment:
| Q |
8 |
taatgttctaatatccaagcttcaaataaaatgaattagaatgatagtcaag |
59 |
Q |
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| T |
36419013 |
taatgttctaatatccaagcttcaaataaaatgaattagaatgatagtcaag |
36418962 |
T |
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Target: chr4 (Bit Score: 52; Significance: 1e-21; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-21
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 234593 - 234644
Alignment:
| Q |
8 |
taatgttctaatatccaagcttcaaataaaatgaattagaatgatagtcaag |
59 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
234593 |
taatgttctaatatccaagcttcaaataaaatgaattagaatgatagtcaag |
234644 |
T |
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