View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4611_high_20 (Length: 304)
Name: NF4611_high_20
Description: NF4611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4611_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 2572310 - 2572015
Alignment:
| Q |
1 |
aaatactccataaaagattgagaatttgaaacaataaattatgagggatcatgcttgaaagaaagagaaaacattaatattgcacttcgtggaatccata |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
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| T |
2572310 |
aaatactccataaaagattgagaatttgaaacaataaattatgagggatcatgcttgaaagaaagagaaaagattaataatgcacttcgtggaatccata |
2572211 |
T |
|
| Q |
101 |
atgatgacgggttttgtaagaaggtccacttgtgacatgcttgcggtatttttaatcatggtgtaatgcaacgttaagcgtgacaacttatcattgtgtt |
200 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
2572210 |
atgatgaagggttttgtaagaaggtccacttgtgacatgcttgaagtatttttaatcatggtgtaatgcaacgttaagtgtgacaacttatcattgtgtt |
2572111 |
T |
|
| Q |
201 |
ggaagtaatcaatattttcactaaagaaacagcaagttacttataaacaaaaaagagtttcaccttgtttataatgaaagcttcttctcctttgct |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2572110 |
ggaagtaatcaatattttcactaaagaaacagcaagttacttataaacaaaaaagagtttcaccttgtttataatgaaagcttcttctcctttgct |
2572015 |
T |
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