View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4613-Insertion-1 (Length: 1041)

Name: NF4613-Insertion-1
Description: NF4613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4613-Insertion-1
NF4613-Insertion-1
[»] chr7 (45 HSPs)
chr7 (8-819)||(32429469-32430289)
chr7 (366-497)||(37547933-37548064)
chr7 (365-497)||(37556461-37556593)
chr7 (843-917)||(32429378-32429453)
chr7 (951-1040)||(32429252-32429344)
chr7 (564-651)||(1718409-1718496)
chr7 (366-424)||(38758319-38758377)
chr7 (366-496)||(706742-706872)
chr7 (366-496)||(708082-708212)
chr7 (709-800)||(31395258-31395347)
chr7 (211-313)||(14676149-14676250)
chr7 (366-424)||(46246577-46246635)
chr7 (367-424)||(38756655-38756712)
chr7 (566-646)||(43883833-43883914)
chr7 (369-426)||(43902103-43902160)
chr7 (366-487)||(27160304-27160425)
chr7 (367-496)||(28556246-28556375)
chr7 (257-364)||(38137914-38138021)
chr7 (709-799)||(9968872-9968963)
chr7 (365-424)||(12178481-12178540)
chr7 (366-424)||(13420288-13420346)
chr7 (267-364)||(38505335-38505432)
chr7 (365-426)||(41591513-41591574)
chr7 (367-424)||(45277969-45278026)
chr7 (367-420)||(46245122-46245175)
chr7 (261-325)||(12884769-12884832)
chr7 (366-426)||(27161995-27162055)
chr7 (366-426)||(41385809-41385869)
chr7 (367-421)||(5974163-5974218)
chr7 (365-424)||(8230068-8230127)
chr7 (365-424)||(30045786-30045845)
chr7 (365-424)||(31392056-31392115)
chr7 (365-424)||(31393661-31393720)
chr7 (365-424)||(40028455-40028514)
chr7 (367-426)||(41593203-41593262)
chr7 (370-425)||(44816107-44816162)
chr7 (221-279)||(7947644-7947702)
chr7 (367-421)||(20208469-20208523)
chr7 (366-424)||(21715071-21715129)
chr7 (366-424)||(21716621-21716679)
chr7 (440-494)||(33823835-33823889)
chr7 (334-363)||(19791727-19791756)
chr7 (334-363)||(21687493-21687522)
chr7 (365-426)||(41384147-41384208)
chr7 (267-363)||(45940402-45940498)
[»] chr2 (36 HSPs)
chr2 (527-765)||(10206660-10206898)
chr2 (541-772)||(37107895-37108124)
chr2 (367-497)||(9261463-9261591)
chr2 (254-362)||(5322122-5322230)
chr2 (365-424)||(28167332-28167391)
chr2 (366-424)||(28165657-28165715)
chr2 (366-487)||(5694612-5694734)
chr2 (365-426)||(22054332-22054393)
chr2 (561-664)||(18696807-18696910)
chr2 (365-424)||(44906137-44906196)
chr2 (365-496)||(18224775-18224906)
chr2 (367-424)||(40304764-40304821)
chr2 (367-419)||(9262899-9262951)
chr2 (214-363)||(3737228-3737376)
chr2 (367-426)||(22060160-22060219)
chr2 (365-420)||(45499303-45499358)
chr2 (366-424)||(16288976-16289034)
chr2 (366-420)||(40303292-40303346)
chr2 (356-426)||(43516387-43516457)
chr2 (366-424)||(45493034-45493092)
chr2 (366-424)||(45500776-45500834)
chr2 (368-421)||(22060485-22060538)
chr2 (365-426)||(44820930-44820991)
chr2 (324-364)||(16813674-16813714)
chr2 (324-364)||(16852953-16852993)
chr2 (364-424)||(28563373-28563433)
chr2 (307-366)||(41503189-41503249)
chr2 (357-424)||(44904516-44904584)
chr2 (367-426)||(28563955-28564014)
chr2 (370-421)||(31557948-31557999)
chr2 (365-424)||(44097355-44097414)
chr2 (365-414)||(1840155-1840204)
chr2 (367-424)||(1841757-1841814)
chr2 (357-414)||(6844109-6844166)
chr2 (699-799)||(37599617-37599719)
chr2 (563-664)||(40365859-40365960)
[»] chr8 (27 HSPs)
chr8 (554-799)||(40219835-40220080)
chr8 (366-487)||(7272899-7273020)
chr8 (366-496)||(17706164-17706294)
chr8 (365-496)||(36899896-36900028)
chr8 (366-426)||(357976-358036)
chr8 (709-799)||(12867695-12867786)
chr8 (365-424)||(39884614-39884673)
chr8 (366-424)||(39886078-39886136)
chr8 (366-496)||(17707378-17707508)
chr8 (366-496)||(36901107-36901237)
chr8 (365-426)||(45447003-45447064)
chr8 (365-424)||(7274653-7274712)
chr8 (561-664)||(31136061-31136164)
chr8 (709-799)||(41091698-41091789)
chr8 (366-424)||(3158039-3158097)
chr8 (365-422)||(359318-359375)
chr8 (214-290)||(4428818-4428894)
chr8 (229-358)||(3393928-3394056)
chr8 (366-453)||(25562758-25562846)
chr8 (334-364)||(1111126-1111156)
chr8 (615-661)||(9991328-9991374)
chr8 (522-596)||(12867902-12867976)
chr8 (366-424)||(25264339-25264397)
chr8 (262-324)||(28169855-28169916)
chr8 (295-364)||(41866118-41866188)
chr8 (229-290)||(13949804-13949865)
chr8 (368-425)||(21142480-21142537)
[»] chr1 (52 HSPs)
chr1 (365-497)||(11431258-11431390)
chr1 (365-497)||(32847812-32847944)
chr1 (365-497)||(35382986-35383117)
chr1 (367-497)||(32849858-32849988)
chr1 (368-497)||(35381385-35381514)
chr1 (367-497)||(11429226-11429356)
chr1 (365-424)||(12095875-12095934)
chr1 (209-313)||(52073501-52073604)
chr1 (366-424)||(12097942-12098000)
chr1 (564-646)||(46269078-46269160)
chr1 (365-488)||(46605860-46605983)
chr1 (365-426)||(8323439-8323500)
chr1 (365-418)||(10708028-10708081)
chr1 (367-424)||(13222914-13222971)
chr1 (365-426)||(31815770-31815831)
chr1 (563-664)||(33568505-33568606)
chr1 (365-487)||(43883744-43883866)
chr1 (358-426)||(28251922-28251990)
chr1 (218-364)||(28848790-28848936)
chr1 (370-424)||(40767618-40767672)
chr1 (365-426)||(31809987-31810048)
chr1 (365-424)||(43882052-43882112)
chr1 (366-426)||(50315317-50315377)
chr1 (367-426)||(8322521-8322580)
chr1 (359-424)||(13229275-13229341)
chr1 (324-361)||(5970435-5970472)
chr1 (366-419)||(9419825-9419878)
chr1 (367-424)||(33259374-33259431)
chr1 (367-424)||(33279533-33279590)
chr1 (253-294)||(34738285-34738326)
chr1 (708-765)||(38040900-38040957)
chr1 (367-424)||(46604439-46604496)
chr1 (209-290)||(50586972-50587053)
chr1 (368-424)||(16592022-16592078)
chr1 (217-313)||(23412006-23412101)
chr1 (366-422)||(26734425-26734481)
chr1 (257-313)||(27102877-27102932)
chr1 (566-646)||(48242354-48242434)
chr1 (736-799)||(3861636-3861699)
chr1 (674-765)||(5412977-5413068)
chr1 (709-799)||(11648595-11648683)
chr1 (365-424)||(16673258-16673317)
chr1 (365-424)||(24437072-24437131)
chr1 (365-424)||(28360767-28360826)
chr1 (365-424)||(33257879-33257938)
chr1 (365-424)||(33278051-33278110)
chr1 (366-424)||(7655266-7655324)
chr1 (368-426)||(9626469-9626527)
chr1 (328-366)||(33324677-33324715)
chr1 (365-426)||(9627581-9627642)
chr1 (295-364)||(51246565-51246634)
chr1 (365-426)||(52793702-52793763)
[»] chr3 (44 HSPs)
chr3 (365-497)||(3026811-3026942)
chr3 (363-493)||(25529851-25529980)
chr3 (365-497)||(3025821-3025953)
chr3 (366-497)||(39870453-39870584)
chr3 (209-313)||(32858755-32858858)
chr3 (209-364)||(1132926-1133081)
chr3 (367-497)||(39872075-39872205)
chr3 (564-646)||(43858150-43858232)
chr3 (367-426)||(5377807-5377866)
chr3 (366-424)||(3150021-3150079)
chr3 (366-426)||(5387255-5387315)
chr3 (364-424)||(41081799-41081859)
chr3 (571-644)||(47746236-47746309)
chr3 (560-648)||(33334930-33335017)
chr3 (365-421)||(33551586-33551641)
chr3 (366-417)||(27662666-27662717)
chr3 (366-425)||(32558918-32558977)
chr3 (365-420)||(40499258-40499313)
chr3 (365-424)||(48566994-48567053)
chr3 (366-420)||(41083277-41083331)
chr3 (369-426)||(24613612-24613669)
chr3 (367-424)||(31795373-31795430)
chr3 (367-420)||(31796840-31796893)
chr3 (367-424)||(55196574-55196631)
chr3 (300-364)||(2420685-2420749)
chr3 (215-279)||(11500036-11500099)
chr3 (440-496)||(27320627-27320683)
chr3 (365-425)||(32615647-32615707)
chr3 (214-286)||(49855887-49855959)
chr3 (365-424)||(33732963-33733022)
chr3 (370-425)||(33781495-33781550)
chr3 (321-364)||(54877998-54878041)
chr3 (370-424)||(3149265-3149319)
chr3 (209-279)||(3707030-3707100)
chr3 (615-661)||(12949699-12949745)
chr3 (367-424)||(13645481-13645536)
chr3 (605-663)||(18377678-18377736)
chr3 (368-414)||(24612279-24612325)
chr3 (329-363)||(27197307-27197341)
chr3 (736-798)||(36625375-36625437)
chr3 (367-424)||(26537414-26537471)
chr3 (365-426)||(33780655-33780716)
chr3 (367-420)||(48568536-48568589)
chr3 (369-426)||(55198317-55198374)
[»] chr6 (18 HSPs)
chr6 (636-799)||(13842967-13843132)
chr6 (214-364)||(13380470-13380621)
chr6 (714-799)||(20805989-20806076)
chr6 (364-426)||(11065654-11065716)
chr6 (366-426)||(7796748-7796808)
chr6 (209-289)||(33939199-33939279)
chr6 (365-424)||(1258442-1258501)
chr6 (365-414)||(843533-843582)
chr6 (708-799)||(26306715-26306807)
chr6 (367-426)||(842186-842245)
chr6 (365-424)||(1256712-1256771)
chr6 (736-799)||(31439646-31439709)
chr6 (367-421)||(8745432-8745486)
chr6 (300-361)||(26713878-26713940)
chr6 (367-424)||(1443417-1443474)
chr6 (736-777)||(17737646-17737687)
chr6 (365-426)||(19596341-19596402)
chr6 (365-426)||(30321164-30321225)
[»] chr5 (23 HSPs)
chr5 (366-497)||(41281873-41282004)
chr5 (648-799)||(34424481-34424630)
chr5 (365-424)||(33489901-33489960)
chr5 (712-799)||(14804796-14804886)
chr5 (211-313)||(17668195-17668296)
chr5 (218-364)||(19389819-19389964)
chr5 (328-364)||(21916297-21916333)
chr5 (708-799)||(43437237-43437329)
chr5 (365-424)||(16308563-16308622)
chr5 (365-420)||(38624714-38624769)
chr5 (295-364)||(14570041-14570111)
chr5 (368-487)||(35929523-35929642)
chr5 (295-364)||(38568368-38568438)
chr5 (706-799)||(43465514-43465608)
chr5 (260-364)||(9096295-9096399)
chr5 (254-313)||(6491154-6491212)
chr5 (367-426)||(9670959-9671018)
chr5 (366-425)||(9672352-9672411)
chr5 (365-424)||(38626172-38626231)
chr5 (223-287)||(2561043-2561107)
chr5 (686-763)||(22030961-22031038)
chr5 (369-426)||(35931348-35931405)
chr5 (209-270)||(38120271-38120332)
[»] scaffold0394 (1 HSPs)
scaffold0394 (693-799)||(3539-3645)
[»] chr4 (39 HSPs)
chr4 (366-418)||(11148349-11148401)
chr4 (366-424)||(2671540-2671598)
chr4 (365-426)||(4906127-4906188)
chr4 (226-315)||(27485293-27485381)
chr4 (367-426)||(4931998-4932057)
chr4 (365-412)||(20947606-20947653)
chr4 (365-422)||(4933335-4933392)
chr4 (369-471)||(28426836-28426938)
chr4 (365-422)||(29756270-29756327)
chr4 (366-426)||(2672963-2673023)
chr4 (366-426)||(29757608-29757668)
chr4 (214-305)||(31428740-31428831)
chr4 (210-294)||(34236586-34236670)
chr4 (367-422)||(4907465-4907520)
chr4 (365-424)||(18597856-18597915)
chr4 (365-424)||(48713464-48713523)
chr4 (224-287)||(53013546-53013609)
chr4 (366-424)||(19994497-19994555)
chr4 (366-424)||(19996056-19996114)
chr4 (366-424)||(22307670-22307728)
chr4 (370-424)||(22309140-22309194)
chr4 (729-799)||(24275076-24275146)
chr4 (366-424)||(34538125-34538183)
chr4 (223-289)||(54723972-54724038)
chr4 (209-313)||(21081274-21081378)
chr4 (369-426)||(35786680-35786737)
chr4 (265-361)||(35959177-35959273)
chr4 (366-426)||(23703863-23703923)
chr4 (368-424)||(33609346-33609402)
chr4 (365-424)||(34539800-34539858)
chr4 (365-424)||(42977196-42977255)
chr4 (365-424)||(42978921-42978980)
chr4 (365-424)||(44251603-44251662)
chr4 (254-359)||(48417606-48417712)
chr4 (366-424)||(54123547-54123605)
chr4 (366-424)||(55948955-55949013)
chr4 (367-424)||(32082635-32082692)
chr4 (209-274)||(41495710-41495775)
chr4 (260-313)||(54205815-54205867)
[»] scaffold0129 (1 HSPs)
scaffold0129 (366-426)||(4257-4317)
[»] scaffold0280 (1 HSPs)
scaffold0280 (361-424)||(12125-12188)
[»] scaffold1185 (1 HSPs)
scaffold1185 (605-671)||(2103-2169)


Alignment Details
Target: chr7 (Bit Score: 624; Significance: 0; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 624; E-Value: 0
Query Start/End: Original strand, 8 - 819
Target Start/End: Complemental strand, 32430289 - 32429469
Alignment:
Q  8 caaataaatgttttttcttgtaaaataacactagctctaaattttactacacaatttttagcatgttgcactttaaattatattcaaactaacttaaaat 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32430289 caaataaatgttttttcttgtaaaataacactagctctaaattttactacacaatttttagcatgttgcactttaaattatattcaaactaacttaaa-t 32430191  T
Q  108 ttaattcaaagctaattcttaaatctgaatttatcctcattacctagtcattaaggttttgtgtttggaggggaaagaagacgaggggtttgnnnnnnnn 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  32430190 ttaattcaaagctaattcttaaatctgaatttatcctcattacctagtcattaaggttttgtgtttggaggggaaagaagacgaggggtttgaaaaaaaa 32430091  T
Q  208 n---ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttggggga 304  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  32430090 taaaggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggtttatttttcttcgtaatgcaaaatcctcttcaatttgggg-a 32429992  T
Q  305 actcaaaaaatatatcggagagagtttttgagggtttatataaattcttcaaatttaatcaaggcttaaataagtaaaaagtccctgtaagttggcgcgt 404  Q
    ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32429991 actcaaaaaatgtattggagagagtttttgagggtttatatgaattcttcaaatttaattaaggcttaaataagtaaaaagtccctgtaagttggcgcgt 32429892  T
Q  405 ttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacattttggaactcgtccatgccgtcaggttccgtgnnnnnnn 504  Q
    ||||||||||||||||||||||       ||||||||| |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||           
T  32429891 ttttggttttagtccctgtaagtttttttcttgcgaaataacccttgtaattaccaaacgttttggaactcgtccctgccgccaggttccgtgaaaaaaa 32429792  T
Q  505 -tggtttgcaccataatatggtttctaatccttctactcttgtcgaacatgtcaaattaaattctttcttatggttgaggtcaaaacaggtgaattttga 603  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32429791 atggtttgcaccataatatggtttctaatccttctactcttgtcgaacaggtcaaattaaattctttcttatggttgaagtcaaaacaggtgaattttga 32429692  T
Q  604 ttatacttataatgattggtggcaacacc----ctattctttgtatgagtgtccacttgtaatttgtttttgtcttggtggtgctcccttgtggtggc-- 697  Q
    |||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||      
T  32429691 ttatacttataatgattggtggcaacaccttaattattctttgtatgagtgtccacttgtaatttgtttttgtcttggtggtgctcccttgcggtggcta 32429592  T
Q  698 taccttgttagtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaatgtatctctttttagtttgttaaaaa 797  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32429591 taccttgttagtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaatgtatctctttctagtttgttaaaaa 32429492  T
Q  798 aa-gcaatgctcttaattttggt 819  Q
    || ||||||||||||||||||||    
T  32429491 aaggcaatgctcttaattttggt 32429469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 366 - 497
Target Start/End: Original strand, 37547933 - 37548064
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||       ||||||||||| |||||||||||||||||| |    
T  37547933 aggcttaaataagtaaaaggtccttgtaagttggtgcgtttttggttttagtccctgtaagtttttttcttgcgaaacagcccttgtaattaccaaacgt 37548032  T
Q  466 tttggaactcgtccatgccgtcaggttccgtg 497  Q
    |||||||||||||| |||| ||| ||||||||    
T  37548033 tttggaactcgtccctgccatcaagttccgtg 37548064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 365 - 497
Target Start/End: Complemental strand, 37556593 - 37556461
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    ||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||| ||        ||||||||||||||||||||||||||| ||     
T  37556593 aaggcttaaataagtaaaaggtccctgtaaattggtgcgttttttgttttagtccctgcaattttttttcttgcgaaacaacccttgtaattaccacacg 37556494  T
Q  465 ttttggaactcgtccatgccgtcaggttccgtg 497  Q
    ||||||||||| ||| |||||||||||||||||    
T  37556493 ttttggaactcatccctgccgtcaggttccgtg 37556461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 843 - 917
Target Start/End: Complemental strand, 32429453 - 32429378
Alignment:
Q  843 gaatctagataaaaatcaataaggtaatgctcttaattctagtaa-aaaatagaatctcgtaataaggtaatgcta 917  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32429453 gaatctagataaaaatcaataaggtaatgctcttaattctagtaaaaaaatagaatctcgtaataaggtaatgcta 32429378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 951 - 1040
Target Start/End: Complemental strand, 32429344 - 32429252
Alignment:
Q  951 cgaccaattcaaaacattaccttgttagtgaggatcgcgattaattgccttatt-gtgtacatc-agatatc-aggtttcatatgactcatta 1040  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||| ||||||| | ||||||||||||||||||    
T  32429344 cgaccaattcaaaacattaccttgtcagcgaggatcgcgattaattgccttattggtgaacatcaagatatcaaagtttcatatgactcatta 32429252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 1718409 - 1718496
Alignment:
Q  564 attctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatgagtgt 651  Q
    ||||||| |||||||||||||| |||||||||  |||||||||| ||||| ||||||||||| |||||||||||| ||||||| ||||    
T  1718409 attcttttttatggttgaggtctaaacaggtggcttttgattattcttatcatgattggtggaaacaccctattcattgtatgggtgt 1718496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 38758377 - 38758319
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  38758377 aggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggttttagtccctgta 38758319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 366 - 496
Target Start/End: Original strand, 706742 - 706872
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    ||||||||||| |||||| |||||||||| || ||| ||||||||||||||||||||||||        ||   ||||||||||||||||| | |||| |    
T  706742 aggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccctgtaagtttttttgttctaaaacaacccttgtaatttcgaaacct 706841  T
Q  466 tttggaactcgtccatgccgtcaggttccgt 496  Q
    ||||||| || ||| ||||||||||||||||    
T  706842 tttggaaatcatccctgccgtcaggttccgt 706872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 366 - 496
Target Start/End: Complemental strand, 708212 - 708082
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    ||||||||||| |||||| |||||||||| || ||| ||||||||||||||||| ||||||        ||   ||||||||||||||||| | |||| |    
T  708212 aggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccatgtaagtttttttgttctaaaacaacccttgtaatttcgaaacct 708113  T
Q  466 tttggaactcgtccatgccgtcaggttccgt 496  Q
    ||||||| |||||| ||||||||||||||||    
T  708112 tttggaaatcgtccctgccgtcaggttccgt 708082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 709 - 800
Target Start/End: Complemental strand, 31395347 - 31395258
Alignment:
Q  709 tgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaatgtatctctttttagtttgttaaaaaaag 800  Q
    |||||||||||||| ||| ||||||  |||||| ||||||||||||| |||||  ||||||||  ||| || ||||||||||||||||||||    
T  31395347 tgtaaatactcttgtgtggtttgccttttgcacgccttgtgcggggtaaatcacagttgttaa--tatatcattttagtttgttaaaaaaag 31395258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 313
Target Start/End: Original strand, 14676149 - 14676250
Alignment:
Q  211 aatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaa 310  Q
    ||||||||||| ||||||||| ||||  ||||| ||| |||  ||||||||||||||||||||  |||| | |||||||| || ||||| ||||||||||    
T  14676149 aatgagcaagtggaagaaatatatgagattgagtggggaaggctttggaggttcatttttctttataatactaaatcctcctc-atttgtgggaactcaa 14676247  T
Q  311 aaa 313  Q
    |||    
T  14676248 aaa 14676250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 46246635 - 46246577
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||||||    
T  46246635 aggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 46246577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 38756655 - 38756712
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||   |||| ||||||||||||| ||||||||||||||||||||||||||    
T  38756655 ggcttaaatattaaaaaggtccctgtaagttagcgcgtttttggttttagtccctgta 38756712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 566 - 646
Target Start/End: Complemental strand, 43883914 - 43883833
Alignment:
Q  566 tctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatga-ttggtggcaacaccctattctttgtatg 646  Q
    ||||| |||||||||||||| |||||||||  ||||| |||| ||||| |||| |||||| ||||||||||||| |||||||    
T  43883914 tcttttttatggttgaggtctaaacaggtggcttttgcttattcttatcatgatttggtgccaacaccctattcattgtatg 43883833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 43902160 - 43902103
Alignment:
Q  369 cttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||||||||||||| ||| ||||||| ||||| ||||||||| |||||||    
T  43902160 cttaaataagtaaaaagtccctataaattggcgcattttttgttttagtctctgtaag 43902103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 487
Target Start/End: Original strand, 27160304 - 27160425
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    |||||||||||||||||| |||| |||||||| | | | |||||||||| |||||||||||        |||| | ||||||| |||| ||||||||| |    
T  27160304 aggcttaaataagtaaaaggtccttgtaagttcgtgagattttggttttcgtccctgtaagtttttttgttgcaagacaacccctgtatttaccaaacgt 27160403  T
Q  466 tttggaactcgtccatgccgtc 487  Q
    ||||  | ||||||||||||||    
T  27160404 tttgacattcgtccatgccgtc 27160425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 496
Target Start/End: Original strand, 28556246 - 28556375
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacatt 466  Q
    |||||||||| |||||| ||  |||||| || ||| |||||||||||||||| |||||||        ||   ||||||||||||||||| | |||| ||    
T  28556246 ggcttaaatatgtaaaaggtatctgtaatttagcgtgtttttggttttagtctctgtaagtttttttgttctaaaacaacccttgtaatttcgaaacctt 28556345  T
Q  467 ttggaactcgtccatgccgtcaggttccgt 496  Q
    |||||| || ||| ||||||||||||||||    
T  28556346 ttggaaatcatccctgccgtcaggttccgt 28556375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 257 - 364
Target Start/End: Original strand, 38137914 - 38138021
Alignment:
Q  257 ggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatatatcgga-gagagtttttgagggtttatataaattcttca 355  Q
    |||||||||||||||||| |||| |||||||||| || |||||||||| |||||||  | ||| ||| ||| || || || ||| ||||| |||||||||    
T  38137914 ggaggttcatttttcttcataatacaaaatcctcctc-atttgggggagctcaaaatttgtattggaggagggtattggaaggtctatatgaattcttca 38138012  T
Q  356 aatttaatc 364  Q
    |||||||||    
T  38138013 aatttaatc 38138021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 709 - 799
Target Start/End: Original strand, 9968872 - 9968963
Alignment:
Q  709 tgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttg-ttaatgtatctctttttagtttgttaaaaaaa 799  Q
    |||||||||| |||| |||||  ||  |||||||||||||||||||||  ||||||||| ||||| ||| || |||||| ||||||||||||    
T  9968872 tgtaaatacttttggctgattcaccttttgcacaccttgtgcggggtgtttcattgttgattaatatatatcattttagcttgttaaaaaaa 9968963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 12178481 - 12178540
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||| |||||| |||||| ||| |||||||||||| |||||||||    
T  12178481 aaggcttaaatatgtaaaaggtccctctaagttcgcgtgtttttggttttcgtccctgta 12178540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 13420346 - 13420288
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  | ||||||||||| ||| ||||||||||||||||||||||    
T  13420346 aggcttaaatatgtaaatggcccctgtaagtttgcgtgtttttggttttagtccctgta 13420288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 38505432 - 38505335
Alignment:
Q  267 ttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatatatcggag-agagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    |||||||| |||| ||||| |||| ||| ||||||||||||  |||| | ||| |||| || ||||| |||||||||||| ||||||||||||||||||    
T  38505432 ttttcttcataatacaaaaccctcctca-tttgggggaactataaaattgtattggaggagggttttggagggtttatatgaattcttcaaatttaatc 38505335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 41591513 - 41591574
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||| |||||||||| || |||| ||||| ||||| |||||||||||    
T  41591513 aaggcttaaatatgtaaaaggtccctgtaatttcgcgcattttttgttttcgtccctgtaag 41591574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 45278026 - 45277969
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  45278026 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 45277969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 420
Target Start/End: Original strand, 46245122 - 46245175
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccc 420  Q
    |||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||    
T  46245122 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccc 46245175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 261 - 325
Target Start/End: Complemental strand, 12884832 - 12884769
Alignment:
Q  261 gttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatatatcggaga 325  Q
    ||||| |||||||| |||| |||||||| ||| |||||||||||||||||||||| |||| ||||    
T  12884832 gttcagttttcttcataatacaaaatcccctt-aatttgggggaactcaaaaaatctatcagaga 12884769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 27162055 - 27161995
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||| |||||| ||||||||||||| ||| | |||||||||| |||| ||||||    
T  27162055 aggcttaaatatgtaaaaggtccctgtaagttcgcgagattttggttttcgtccttgtaag 27161995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 41385869 - 41385809
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||| |||||  ||||||||||||| |||| ||||| ||||| |||||||||||    
T  41385869 aggcttaaatatgtaaatggtccctgtaagttcgcgcattttttgttttggtccctgtaag 41385809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 421
Target Start/End: Original strand, 5974163 - 5974218
Alignment:
Q  367 ggcttaaataagtaaaaag-tccctgtaagttggcgcgtttttggttttagtccct 421  Q
    ||||||||||||||||||| ||| |||||||| | | |||||||||||||||||||    
T  5974163 ggcttaaataagtaaaaagatccatgtaagttagtgtgtttttggttttagtccct 5974218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 8230068 - 8230127
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| |||| | |||||||||||| |||||||||    
T  8230068 aaggcttaaatatgtaaatcgtccctgtaatttggtgtgtttttggttttcgtccctgta 8230127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 30045786 - 30045845
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||||||| || ||||| ||||||| |||||||||| |||| ||||| ||||    
T  30045786 aaggcttaaataagtagaaggtccccgtaagttagcgcgttttttgtttaagtccatgta 30045845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 31392056 - 31392115
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| ||| || |||||||||||| |||||||||    
T  31392056 aaggcttaaatatgtaaatcgtccctgtaatttgacgtgtttttggttttcgtccctgta 31392115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 31393720 - 31393661
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| |||||| |||||||||||| |||| ||||    
T  31393720 aaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgta 31393661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 40028455 - 40028514
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||| ||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  40028455 aaggtttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 40028514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 41593262 - 41593203
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||| |||||  ||||||||||||| | || ||||||||||| |||||||||||    
T  41593262 ggcttaaatatgtaaatggtccctgtaagttcgtgcatttttggttttggtccctgtaag 41593203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 425
Target Start/End: Complemental strand, 44816162 - 44816107
Alignment:
Q  370 ttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaa 425  Q
    ||||||||| |||| |||||| |||| | |||||||||| ||||||||||||||||    
T  44816162 ttaaataagaaaaaggtccctataagatcgcgcgttttttgttttagtccctgtaa 44816107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 7947644 - 7947702
Alignment:
Q  221 tagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaat 279  Q
    |||||||||||||| |   ||||||||||||||||| | ||||||||||||||| ||||    
T  7947644 tagaagaaatagataacaatgagagggaaagattttaggggttcatttttcttcataat 7947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 367 - 421
Target Start/End: Complemental strand, 20208523 - 20208469
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccct 421  Q
    |||||||||| ||||||  |||||||||||||| | ||||||| |||||||||||    
T  20208523 ggcttaaatatgtaaaagatccctgtaagttggtgtgtttttgcttttagtccct 20208469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 21715071 - 21715129
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  |||||||||| |||||| ||||||| |||| |||||||||    
T  21715071 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttgattttcgtccctgta 21715129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 21716679 - 21716621
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  || ||||||| |||||| |||||||||||| |||||||||    
T  21716679 aggcttaaatatgtaaatcgttcctgtaatttggcgtgtttttggttttcgtccctgta 21716621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 33823835 - 33823889
Alignment:
Q  440 aaacaacccttgtaattaccaaacattttggaactcgtccatgccgtcaggttcc 494  Q
    ||||||||||||||||| | |||| |||||||| || ||| ||||||||||||||    
T  33823835 aaacaacccttgtaatttcgaaaccttttggaaatcatccttgccgtcaggttcc 33823889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 334 - 363
Target Start/End: Original strand, 19791727 - 19791756
Alignment:
Q  334 gagggtttatataaattcttcaaatttaat 363  Q
    ||||||||||||||||||||||||||||||    
T  19791727 gagggtttatataaattcttcaaatttaat 19791756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 334 - 363
Target Start/End: Original strand, 21687493 - 21687522
Alignment:
Q  334 gagggtttatataaattcttcaaatttaat 363  Q
    ||||||||||||||||||||||||||||||    
T  21687493 gagggtttatataaattcttcaaatttaat 21687522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 41384147 - 41384208
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||  |||| |||||||| |||| ||||| ||||| |||||||||||    
T  41384147 aaggcttaaatatgtaaatggtccttgtaagttcgcgcattttttgttttggtccctgtaag 41384208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 363
Target Start/End: Complemental strand, 45940498 - 45940402
Alignment:
Q  267 ttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatatatcggag-agagtttttgagggtttatataaattcttcaaatttaat 363  Q
    |||||||| |||| ||||| |||| ||| ||||| |||||| ||||| | ||| |||| |||||||| ||||||| |||  |||||||||||||||||    
T  45940498 ttttcttcataatacaaaaccctcctca-tttggaggaactaaaaaattgtattggagtagagttttggagggttaataagaattcttcaaatttaat 45940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 5e-65; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 527 - 765
Target Start/End: Complemental strand, 10206898 - 10206660
Alignment:
Q  527 tctaatccttctactcttgtcgaacatgtcaaattaaattctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggc 626  Q
    ||||||||||||  |||||| ||||| |||||||||||||||||||||||||||| || |||| ||||||||||||  |||| |||| |||||||||| |    
T  10206898 tctaatccttctgttcttgttgaacaagtcaaattaaattctttcttatggttgaagttaaaataggtgaattttggctatagttatcatgattggtgac 10206799  T
Q  627 aacaccctattctttgtatgagtgtccacttgtaatttgtttttgtcttggtggtgctcccttgtggtggctaccttgttagtgtaaatactcttgggtg 726  Q
    ||||||  |||||||||||| ||||||||||||||||||||| ||  ||||||||| | |||||| ||||| |||||| |  ||||||||| ||||||||    
T  10206798 aacacctcattctttgtatgggtgtccacttgtaatttgtttatggtttggtggtggttccttgttgtggccaccttgatcttgtaaatacacttgggtg 10206699  T
Q  727 atttgccccttgcacaccttgtgcggggtgaatcattgt 765  Q
     ||||||||||||||| ||||||||||||||||||||||    
T  10206698 gtttgccccttgcacatcttgtgcggggtgaatcattgt 10206660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 541 - 772
Target Start/End: Complemental strand, 37108124 - 37107895
Alignment:
Q  541 tcttgtcgaacatgtcaaattaaattctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctt 640  Q
    |||||||||||| |||||||||||||||||||||||||| |  ||||||||||||| |||| | |||| || | || |||||| | |||| ||  |||||    
T  37108124 tcttgtcgaacaggtcaaattaaattctttcttatggtttaaatcaaaacaggtgacttttcactatagtttttataattggt-gaaacatccgcttctt 37108026  T
Q  641 tgtatgagtgtccacttgtaatttgtttttgtcttggtggtgctcccttgtggtggctaccttgttagtgtaaatactcttgggtgatttgccccttgca 740  Q
    || |||||||||||||||||||||| ||| |  ||||||||||| ||||||  || | |||||| |  ||||||||||||| |||| |||  ||||||||    
T  37108025 tgcatgagtgtccacttgtaatttg-tttagctttggtggtgcttccttgttttgcccaccttgatcttgtaaatactcttaggtggtttcgcccttgca 37107927  T
Q  741 caccttgtgcggggtgaatcattgttgttaat 772  Q
    |||||||| |||  ||||||||||||||||||    
T  37107926 caccttgtacggaatgaatcattgttgttaat 37107895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 367 - 497
Target Start/End: Original strand, 9261463 - 9261591
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacatt 466  Q
    ||||||||||||||||| |||  |||||||| |||||| ||||||||||||| |||||          |||| |||||| |||||||||||||| |||||    
T  9261463 ggcttaaataagtaaaaggtcaatgtaagtttgcgcgtgtttggttttagtctctgta--tctttttgttgcaaaacaatccttgtaattaccagacatt 9261560  T
Q  467 ttggaactcgtccatgccgtcaggttccgtg 497  Q
    ||| || |||||| |||||||||||||||||    
T  9261561 ttgaaagtcgtccctgccgtcaggttccgtg 9261591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 254 - 362
Target Start/End: Complemental strand, 5322230 - 5322122
Alignment:
Q  254 tttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatatatcgg-agagagtttttgagggtttatataaattct 352  Q
    ||||| ||||||||||||||| |||| |||||||||| || ||||||||||||||||||| | ||| || | || ||||| |||||||||||| |||| |    
T  5322230 tttgggggttcatttttcttcataatacaaaatcctcctc-atttgggggaactcaaaaactgtattggaaaagggttttggagggtttatatgaattat 5322132  T
Q  353 tcaaatttaa 362  Q
    ||||||||||    
T  5322131 tcaaatttaa 5322122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 28167391 - 28167332
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  28167391 aaggtttaaataagtaaaaggtccctgtaagttagcgcgtttttggttttagtccttgta 28167332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 28165657 - 28165715
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||    
T  28165657 aggcttaaatatgtaaaaggtccatgtaagttagcgcgtttttggttttagtccctgta 28165715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 366 - 487
Target Start/End: Original strand, 5694612 - 5694734
Alignment:
Q  366 aggcttaaataagtaaaaag-tccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    |||||||||||||||||||| || |||||| ||||||| ||||| ||||||||||||||||         |||||| |||| || |||| ||||||||||    
T  5694612 aggcttaaataagtaaaaaggtctctgtaaattggcgcattttttgttttagtccctgtaaatttttttgttgcgagacaaaccctgtatttaccaaaca 5694711  T
Q  465 ttttggaactcgtccatgccgtc 487  Q
    ||||| | || ||||||||||||    
T  5694712 ttttgtatctagtccatgccgtc 5694734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 22054332 - 22054393
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||||||    
T  22054332 aaggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgtaag 22054393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 561 - 664
Target Start/End: Complemental strand, 18696910 - 18696807
Alignment:
Q  561 taaattctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatgagtgtccacttgta 660  Q
    |||| ||||| |||||| |||  |||||||| |||| ||||  ||| |||||| ||||||||||| || ||||  ||||||||||| |||||||||||||    
T  18696910 taaactcttttttatggctgaaatcaaaacatgtgacttttatttacacttatcatgattggtggaaaaacccgcttctttgtatgggtgtccacttgta 18696811  T
Q  661 attt 664  Q
    ||||    
T  18696810 attt 18696807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 44906196 - 44906137
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||| ||||    
T  44906196 aaggcttaaataagtaaaaggtccctataagttagcgcgtttttggttttaatccttgta 44906137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 365 - 496
Target Start/End: Complemental strand, 18224906 - 18224775
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    |||||||||||| |||||| |||||||||| || | | ||||||||||||||||||||||||        ||   ||||||||| ||||||| | ||||     
T  18224906 aaggcttaaatatgtaaaaggtccctgtaatttagtgtgtttttggttttagtccctgtaagtttttttgttctaaaacaacccatgtaatttcaaaacc 18224807  T
Q  465 ttttggaactcgtccatgccgtcaggttccgt 496  Q
    |||||||| || ||| ||| ||||||||||||    
T  18224806 ttttggaaatcatccctgctgtcaggttccgt 18224775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 40304821 - 40304764
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||||||    
T  40304821 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 40304764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 419
Target Start/End: Complemental strand, 9262951 - 9262899
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtcc 419  Q
    ||||||||||||||||| || |||||||||| |||||| ||||||||||||||    
T  9262951 ggcttaaataagtaaaaggttcctgtaagttcgcgcgtatttggttttagtcc 9262899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 3737376 - 3737228
Alignment:
Q  214 gagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaa 313  Q
    ||||| || ||||||||||||||| |||||||| ||| |  |||| |||| |||||||||| |||| ||||||| || |||  || |  |||||||||||    
T  3737376 gagcatgtggaagaaatagatgatattgagaggaaaaaaaattgggggttaatttttcttcataatacaaaatcatcctca--tttgaagaactcaaaaa 3737279  T
Q  314 atata-tcggagagagtttttgagggtttatataaattcttcaaatttaat 363  Q
     | || | | | |||||||| ||| ||||| ||||||||||||||||||||    
T  3737278 ttgtattagaaaagagttttagagtgtttacataaattcttcaaatttaat 3737228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 22060219 - 22060160
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||| |||||| |||| |||||||| |||| ||||||||||| |||||||||||    
T  22060219 ggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggttttcgtccctgtaag 22060160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 420
Target Start/End: Original strand, 45499303 - 45499358
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccc 420  Q
    |||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||    
T  45499303 aaggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccc 45499358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 16289034 - 16288976
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| ||||||  ||||||||||||| ||||||||| |||||||| ||||||    
T  16289034 aggcttaaatatgtaaaagatccctgtaagttgacgcgttttttgttttagttcctgta 16288976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 420
Target Start/End: Original strand, 40303292 - 40303346
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccc 420  Q
    ||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||    
T  40303292 aggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccc 40303346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 356 - 426
Target Start/End: Original strand, 43516387 - 43516457
Alignment:
Q  356 aatttaatcaaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||| ||| |||||||||||| |||||| |||||||||| || |||| ||||| ||||| |||||||||||    
T  43516387 aattaaataaaggcttaaatatgtaaaaggtccctgtaatttcgcgcattttttgttttcgtccctgtaag 43516457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 45493092 - 45493034
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||| |||||||||| || ||| |||||||||||| |||||||||    
T  45493092 aggcttaaatatgtaaaaggtccctgtaaattcgcgtgtttttggttttcgtccctgta 45493034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 45500834 - 45500776
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||| |||||||||| || ||| |||||||||||| |||||||||    
T  45500834 aggcttaaatatgtaaaaggtccctgtaaattcgcgtgtttttggttttcgtccctgta 45500776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 22060538 - 22060485
Alignment:
Q  368 gcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccct 421  Q
    ||||||||| |||||| ||||||||||||| ||| |||||||||||| ||||||    
T  22060538 gcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtccct 22060485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 44820991 - 44820930
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||| |||||||||| || |||| ||||| ||||| |||||||||||    
T  44820991 aaggcttaaatatgtaaaaggtccctgtaaattcgcgcattttttgttttcgtccctgtaag 44820930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 16813674 - 16813714
Alignment:
Q  324 gagagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  16813674 gagagttttggagggtttatataaattctttaaatttaatc 16813714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 16852953 - 16852993
Alignment:
Q  324 gagagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  16852953 gagagttttggagggtttatataaattctttaaatttaatc 16852993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 364 - 424
Target Start/End: Original strand, 28563373 - 28563433
Alignment:
Q  364 caaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||| |||||  |||||||||| |||||| |||||||||||| |||| ||||    
T  28563373 caaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgta 28563433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 307 - 366
Target Start/End: Original strand, 41503189 - 41503249
Alignment:
Q  307 tcaaaaaatatatcgga-gagagtttttgagggtttatataaattcttcaaatttaatcaa 366  Q
    ||||||| ||||||||| |||||||||  | |||||||||||| |||||||||||||||||    
T  41503189 tcaaaaattatatcggatgagagttttaaaaggtttatataaactcttcaaatttaatcaa 41503249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 424
Target Start/End: Original strand, 44904516 - 44904584
Alignment:
Q  357 atttaatcaaggcttaaa-taagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||| ||||||||||| || |||||| |||  |||||||| |||| |||||||||||||||||||||    
T  44904516 atttaaacaaggcttaaaatatgtaaaaggtctttgtaagttagcgcatttttggttttagtccctgta 44904584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 28564014 - 28563955
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||| ||||||||||| |||| |||||||| ||| | |||||||||| |||||||||||    
T  28564014 ggctttaataagtaaaaggtccttgtaagttcgcgagattttggttttcgtccctgtaag 28563955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 31557948 - 31557999
Alignment:
Q  370 ttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccct 421  Q
    ||||||| |||||| ||||| |||||||| |||| |||||||||||||||||    
T  31557948 ttaaatatgtaaaaggtccccgtaagttgacgcgcttttggttttagtccct 31557999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 44097414 - 44097355
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||  ||||| ||| ||||||||| ||| |||||||||||| |||||||||    
T  44097414 aaggcttaaatatataaaaggtctctgtaagttcgcgtgtttttggttttcgtccctgta 44097355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 414
Target Start/End: Original strand, 1840155 - 1840204
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggtttt 414  Q
    |||||||||||| |||||  |||||||||| |||||| ||||||||||||    
T  1840155 aaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttt 1840204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 1841814 - 1841757
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||| |||||  ||||||| || |||||| |||||||||||| |||||||||    
T  1841814 ggcttaaatatgtaaatcgtccctgaaatttggcgtgtttttggtttttgtccctgta 1841757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 414
Target Start/End: Complemental strand, 6844166 - 6844109
Alignment:
Q  357 atttaatcaaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggtttt 414  Q
    |||| ||| ||||||||||| |||||| |||| |||||||| ||| ||||||||||||    
T  6844166 attttatctaggcttaaatatgtaaaaggtccttgtaagttcgcgtgtttttggtttt 6844109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 699 - 799
Target Start/End: Original strand, 37599617 - 37599719
Alignment:
Q  699 accttgttagtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaat---gtatctctttttagtttgttaaa 795  Q
    ||||||||  |||||||||||||| |||  |||||  |||||||| ||||||||||| || || ||||||||||    |||||| |||||||||||| ||    
T  37599617 accttgtttttgtaaatactcttgagtgggttgccttttgcacacgttgtgcggggtaaacca-tgttgttaatatattatctcattttagtttgttcaa 37599715  T
Q  796 aaaa 799  Q
    ||||    
T  37599716 aaaa 37599719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 563 - 664
Target Start/End: Complemental strand, 40365960 - 40365859
Alignment:
Q  563 aattctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatgagtgtccacttgtaat 662  Q
    ||||||||||||||||| ||||| |||||| || ||||||  |||  |||  ||||||||||| |||| ||||| | ||||||| || | | ||||||||    
T  40365960 aattctttcttatggttaaggtccaaacagatggattttgtctatttttaccatgattggtggaaacaacctatcccttgtatgtgtcttctcttgtaat 40365861  T
Q  663 tt 664  Q
    ||    
T  40365860 tt 40365859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 1e-47; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 554 - 799
Target Start/End: Original strand, 40219835 - 40220080
Alignment:
Q  554 gtcaaattaaattctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatgagtgtcc 653  Q
    ||||||||||||| |||||||||||| | ||||||||| ||||||||||  |||| |||| |||||||||||||| | || |||||||||||| ||||||    
T  40219835 gtcaaattaaattatttcttatggttaaagtcaaaacatgtgaattttggctatagttatcatgattggtggcaaaatcccattctttgtatgggtgtcc 40219934  T
Q  654 acttgtaatttgtttttgtcttggtggtgctcccttgtggtggctaccttgttagtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggg 753  Q
    ||||||||||||||| | | ||||||||| | |||||| |  || |||||| |  | |||||||||||| ||| |||||||||||||||||||||||||     
T  40219935 acttgtaatttgtttctattttggtggtggttccttgttgaagccaccttgatcttctaaatactcttgagtggtttgccccttgcacaccttgtgcgga 40220034  T
Q  754 gtgaatcattgttgttaatgtatctctttttagtttgttaaaaaaa 799  Q
    |||||||| | || ||||| |||| |  ||| ||||||| ||||||    
T  40220035 gtgaatcaatattattaatatatcccacttttgtttgttcaaaaaa 40220080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 366 - 487
Target Start/End: Original strand, 7272899 - 7273020
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||        |||||| |||| || |||| ||||||||| |    
T  7272899 aggcttaaataagtaaaaggtctctgtaagttggcgcatttttggttttagtccctgtaagtttttttgttgcgagacaaaccctgtatttaccaaacgt 7272998  T
Q  466 tttggaactcgtccatgccgtc 487  Q
    |||||| || |||| |||||||    
T  7272999 tttggatctagtccctgccgtc 7273020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 366 - 496
Target Start/End: Original strand, 17706164 - 17706294
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    ||||||||||| |||||| |||||||||| || ||| ||||||||||||||||| ||||||        ||   ||||||||||||||||| | |||| |    
T  17706164 aggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccttgtaagtttttttgttctaaaacaacccttgtaatttcgaaacct 17706263  T
Q  466 tttggaactcgtccatgccgtcaggttccgt 496  Q
    ||||||| || ||| ||||||||||||||||    
T  17706264 tttggaaatcatccctgccgtcaggttccgt 17706294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 365 - 496
Target Start/End: Original strand, 36899896 - 36900028
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag-nnnnnnncttgcgaaacaacccttgtaattaccaaac 463  Q
    |||||||||||| |||||| |||||||||| || ||| ||||||||||||||||||||||||        |||   ||||||||||||||||| | ||||    
T  36899896 aaggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccctgtaagttttttttcttctaaaacaacccttgtaatttcgaaac 36899995  T
Q  464 attttggaactcgtccatgccgtcaggttccgt 496  Q
     |||||||| || ||| ||||||||| ||||||    
T  36899996 cttttggaaatcatccttgccgtcagattccgt 36900028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 357976 - 358036
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||||||    
T  357976 aggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgtaag 358036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 709 - 799
Target Start/End: Complemental strand, 12867786 - 12867695
Alignment:
Q  709 tgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaat-gtatctctttttagtttgttaaaaaaa 799  Q
    ||||||||||||||  || ||| ||| |||||||||||||| ||||  ||||||||||||| ||  |||||| |||||||||||||||||||    
T  12867786 tgtaaatactcttgattggttttccctttgcacaccttgtgtggggaaaatcattgttgtttataatatctcattttagtttgttaaaaaaa 12867695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 39884614 - 39884673
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  ||||||||||||| ||| ||||||||||||||||||||||    
T  39884614 aaggcttaaatatgtaaatggtccctgtaagttcgcgtgtttttggttttagtccctgta 39884673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 39886136 - 39886078
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  ||||||||||||| ||| ||||||||||||||||||||||    
T  39886136 aggcttaaatatgtaaatggtccctgtaagttcgcgtgtttttggttttagtccctgta 39886078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 366 - 496
Target Start/End: Complemental strand, 17707508 - 17707378
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    ||||||||||| |||||  |||| ||||| || ||| ||||||||||||||||||||||||        ||   ||||||||||| ||||| | |||  |    
T  17707508 aggcttaaatatgtaaatggtccatgtaatttagcgtgtttttggttttagtccctgtaagtttttttgttctaaaacaacccttttaatttcgaaatct 17707409  T
Q  466 tttggaactcgtccatgccgtcaggttccgt 496  Q
    ||||||| |||||| ||||||||||||||||    
T  17707408 tttggaaatcgtccctgccgtcaggttccgt 17707378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 366 - 496
Target Start/End: Complemental strand, 36901237 - 36901107
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    ||||||||||| |||||| |||||||||| || ||| ||||||| |||||||| |||||||        ||   ||||||||||||||||| | |||| |    
T  36901237 aggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttgtttttagtctctgtaagttttttttttctaaaacaacccttgtaatttcgaaacct 36901138  T
Q  466 tttggaactcgtccatgccgtcaggttccgt 496  Q
    ||||||| || ||| || |||||||||||||    
T  36901137 tttggaaatcatccctgacgtcaggttccgt 36901107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 45447003 - 45447064
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||||| |||| ||||||||||||  || |||||||||||||||| ||||||||    
T  45447003 aaggcttaaataagaaaaatgtccctgtaagtccgcacgtttttggttttagttcctgtaag 45447064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 7274712 - 7274653
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||||| |||| ||||||||||||| |||| ||||| |||||||| ||||||    
T  7274712 aaggcttaaataagaaaaaggtccctgtaagttcgcgcattttttgttttagttcctgta 7274653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 664
Target Start/End: Complemental strand, 31136164 - 31136061
Alignment:
Q  561 taaattctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatgagtgtccacttgta 660  Q
    |||| ||||| |||||| |||  ||||||||||||| ||||  ||| | |||| ||||||||||| || ||||  ||||||||||| |||||| ||||||    
T  31136164 taaactcttttttatggctgaaatcaaaacaggtgacttttagttacagttatcatgattggtggaaaaacccgcttctttgtatgggtgtccgcttgta 31136065  T
Q  661 attt 664  Q
    ||||    
T  31136064 attt 31136061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 709 - 799
Target Start/End: Original strand, 41091698 - 41091789
Alignment:
Q  709 tgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcatt-gttgttaatgtatctctttttagtttgttaaaaaaa 799  Q
    ||||||||||||||| || ||  ||  |||||||||||||||||||||| ||||| ||  ||||| ||| || |||||||||||||||||||    
T  41091698 tgtaaatactcttggttgtttcaccttttgcacaccttgtgcggggtgattcattggtaattaatatatatcattttagtttgttaaaaaaa 41091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 3158097 - 3158039
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  ||||||||||||| ||| |||||||||||| |||||||||    
T  3158097 aggcttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtccctgta 3158039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 422
Target Start/End: Complemental strand, 359375 - 359318
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctg 422  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||| ||||| |||||||    
T  359375 aaggcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctg 359318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 4428818 - 4428894
Alignment:
Q  214 gagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctc 290  Q
    ||||||||  |||||||||||||  |||||||| ||||| ||||| | ||| ||||||||| |||| ||||||||||    
T  4428818 gagcaagtgaaagaaatagatgacattgagaggaaaagactttggggcttcttttttcttcataatacaaaatcctc 4428894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 3393928 - 3394056
Alignment:
Q  229 atagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatatatcgga-gaga 327  Q
    ||||||||  ||||| | |||||| ||||| | ||||||||||||  |||| |||||||||| |||  ||  | ||||||||||| ||||| ||| ||||    
T  3393928 atagatgacattgagggagaaagactttggggattcatttttctttataatacaaaatcctcctca--tttagagaactcaaaaattatattggaggaga 3394025  T
Q  328 gtttttgagggtttatataaattcttcaaat 358  Q
    |||||| | |||||| || ||||||||||||    
T  3394026 gtttttcaaggtttacatcaattcttcaaat 3394056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 453
Target Start/End: Complemental strand, 25562846 - 25562758
Alignment:
Q  366 aggcttaaataagtaaaaag-tccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgta 453  Q
    ||||||||||||| |||||| || ||||||||| || |||||||| ||||||||||| ||||        |||||||||||||||||||    
T  25562846 aggcttaaataaggaaaaaggtcactgtaagttcgcacgtttttgattttagtccctctaagtttttttgttgcgaaacaacccttgta 25562758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 334 - 364
Target Start/End: Complemental strand, 1111156 - 1111126
Alignment:
Q  334 gagggtttatataaattcttcaaatttaatc 364  Q
    |||||||||||||||||||||||||||||||    
T  1111156 gagggtttatataaattcttcaaatttaatc 1111126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 661
Target Start/End: Original strand, 9991328 - 9991374
Alignment:
Q  615 atgattggtggcaacaccctattctttgtatgagtgtccacttgtaa 661  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||||||    
T  9991328 atgattggtggaaacacccgcttctttgtatgggtgtccacttgtaa 9991374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 522 - 596
Target Start/End: Complemental strand, 12867976 - 12867902
Alignment:
Q  522 tggtttctaatccttctactcttgtcgaacatgtcaaattaaattctttcttatggttgaggtcaaaacaggtga 596  Q
    |||||||||||||||||| |||  | ||  | || |||||||||||||||||||||||||   ||||||||||||    
T  12867976 tggtttctaatccttctattctcattgacaaggttaaattaaattctttcttatggttgaaagcaaaacaggtga 12867902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 25264339 - 25264397
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  |||||||||| |||||| |||||||||||| |||| ||||    
T  25264339 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgta 25264397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 28169855 - 28169916
Alignment:
Q  262 ttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatatatcggag 324  Q
    ||||||||||||| |||| |||||||||  | |||||||||||||||||||||| ||| ||||    
T  28169855 ttcatttttcttcataatacaaaatccttct-aatttgggggaactcaaaaaatgtattggag 28169916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 41866188 - 41866118
Alignment:
Q  295 atttgggggaactcaaaaaatatatcggag-agagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    |||||||| |||| ||||| | ||| |||| || |||||  ||||||||||||||||||||||||||||||    
T  41866188 atttggggaaactaaaaaattgtattggaggagggttttgaagggtttatataaattcttcaaatttaatc 41866118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 13949865 - 13949804
Alignment:
Q  229 atagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctc 290  Q
    ||||||||  ||||||||| |||| ||||||| ||||||||||||| |||| ||||| ||||    
T  13949865 atagatgacattgagaggggaagactttggagtttcatttttcttcctaatacaaaaccctc 13949804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 368 - 425
Target Start/End: Original strand, 21142480 - 21142537
Alignment:
Q  368 gcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaa 425  Q
    ||||||||| |||||| ||||||||||||| |||| ||||| ||||| |||| |||||    
T  21142480 gcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccttgtaa 21142537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 2e-46; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 365 - 497
Target Start/End: Complemental strand, 11431390 - 11431258
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||       ||||||||||| |||||||||||||||||||    
T  11431390 aaggcttaaataagtaaaaggtccctgtaagttggcgcgtttttcgttttagtccctgtaagtttttttcttgcgaaacagcccttgtaattaccaaaca 11431291  T
Q  465 ttttggaactcgtccatgccgtcaggttccgtg 497  Q
    ||||||||||||||| |||||||||||||||||    
T  11431290 ttttggaactcgtccctgccgtcaggttccgtg 11431258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 365 - 497
Target Start/End: Original strand, 32847812 - 32847944
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||||||||||||||||     
T  32847812 aaggcttaaataagtaaaaggtccctgtaagttggcgcgtttttggttttagtccctgtaagtttttttcttgcgaaacagcccttgtaattaccaaacg 32847911  T
Q  465 ttttggaactcgtccatgccgtcaggttccgtg 497  Q
    ||||||||||||||| |||||||| ||||||||    
T  32847912 ttttggaactcgtccctgccgtcaagttccgtg 32847944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 365 - 497
Target Start/End: Complemental strand, 35383117 - 35382986
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||       |||||||||||| |||||||||| ||| ||     
T  35383117 aaggcttaaataagtaaaaggtcccgataagttggcgcgtttttggttttagtccctgtaagtttttttcttgcgaaacaa-ccttgtaatttccagacg 35383019  T
Q  465 ttttggaactcgtccatgccgtcaggttccgtg 497  Q
    |||||||||||||||||||||||||||||||||    
T  35383018 ttttggaactcgtccatgccgtcaggttccgtg 35382986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 367 - 497
Target Start/End: Complemental strand, 32849988 - 32849858
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacatt 466  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||        ||||||||||||||||||||||||||| || ||    
T  32849988 ggcttaaataagtaaaaggtccctgtaaattggcgcgttttttgttttagtccctgcaattttttttcttgcgaaacaacccttgtaattaccacacgtt 32849889  T
Q  467 ttggaactcgtccatgccgtcaggttccgtg 497  Q
    ||||||||| ||| |||||||||||||||||    
T  32849888 ttggaactcatccctgccgtcaggttccgtg 32849858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 368 - 497
Target Start/End: Original strand, 35381385 - 35381514
Alignment:
Q  368 gcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacattt 467  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||| || |||       ||||||||||| |||| |||||||| |||| |||    
T  35381385 gcttaaataagtaaaaggtacctgtaagttggcgcgtttttggttttagtccatgcaagttttttccttgcgaaacagccctcgtaattacaaaacgttt 35381484  T
Q  468 tggaactcgtccatgccgtcaggttccgtg 497  Q
    |||||||||||| |||| ||| ||||||||    
T  35381485 tggaactcgtccttgccatcaagttccgtg 35381514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 367 - 497
Target Start/End: Original strand, 11429226 - 11429356
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacatt 466  Q
    ||||||||||||||||| ||| |||||| ||||||||||||| ||||||||||||| ||        ||||||||||||||||| ||||||||| || ||    
T  11429226 ggcttaaataagtaaaaggtctctgtaaattggcgcgttttttgttttagtccctgcaaatttttttcttgcgaaacaacccttataattaccatacgtt 11429325  T
Q  467 ttggaactcgtccatgccgtcaggttccgtg 497  Q
    ||||||||| ||| | |||||||||||||||    
T  11429326 ttggaactcatcccttccgtcaggttccgtg 11429356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 12095875 - 12095934
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  12095875 aaggcttaaataagtaaaaggtccctgtaagttcgtgcgtttttggttttagtccctgta 12095934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 52073604 - 52073501
Alignment:
Q  209 ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactc 308  Q
    |||| |||||||| ||||||||||||||  ||||||||| |||  ||||| | ||||||||||||| |||| ||||| |||| || ||||||||||||||    
T  52073604 ggaaggagcaagtggaagaaatagatgacattgagaggggaaggctttggggtttcatttttcttcataattcaaaaccctcctc-atttgggggaactc 52073506  T
Q  309 aaaaa 313  Q
    |||||    
T  52073505 aaaaa 52073501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 12098000 - 12097942
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||    
T  12098000 aggcttaaataagtaaaaggtccccgtaagttcgcgcatttttggttttagtccctgta 12097942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 564 - 646
Target Start/End: Complemental strand, 46269160 - 46269078
Alignment:
Q  564 attctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatg 646  Q
    ||||||| ||||||||||| || |||||||||  ||||| |||| ||||| ||||||||||| |||||||||||| |||||||    
T  46269160 attcttttttatggttgagatctaaacaggtggcttttgcttattcttatcatgattggtggaaacaccctattcattgtatg 46269078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 365 - 488
Target Start/End: Complemental strand, 46605983 - 46605860
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    |||||||||||||| |||| ||||||| ||||  |||||||||| |||||||||||||||||        ||||||||||||||||||| || |  |||     
T  46605983 aaggcttaaataagaaaaaggtccctgaaagtccgcgcgttttttgttttagtccctgtaagtttttttgttgcgaaacaacccttgtattttcttaact 46605884  T
Q  465 ttttggaactcgtccatgccgtca 488  Q
    ||||| || |||||| ||||||||    
T  46605883 ttttgaaattcgtccctgccgtca 46605860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 8323500 - 8323439
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||||||    
T  8323500 aaggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgtaag 8323439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 10708028 - 10708081
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtc 418  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  10708028 aaggcttaaatatgtaaaaagtccctgtaagttcgcgtgtttttggttttagtc 10708081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 13222914 - 13222971
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||||||||| ||||    
T  13222914 ggcttaaataagtaaaaggtccctgtaagttagcacgtttttggttttagtccgtgta 13222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 31815831 - 31815770
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||||||    
T  31815831 aaggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgtaag 31815770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 563 - 664
Target Start/End: Complemental strand, 33568606 - 33568505
Alignment:
Q  563 aattctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatgagtgtccacttgtaat 662  Q
    ||||||||| ||||||| ||||| || |||||||||||||  ||| ||||| ||||||||||| ||||||  || | |||||||||||| | ||||||||    
T  33568606 aattctttcctatggttaaggtccaagcaggtgaattttgtctattcttatcatgattggtggaaacacctcatcccttgtatgagtgttctcttgtaat 33568507  T
Q  663 tt 664  Q
    ||    
T  33568506 tt 33568505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 365 - 487
Target Start/End: Complemental strand, 43883866 - 43883744
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    ||||||||||||||||||| |||| |||||||||| || ||||| ||||||||||||||||         |||||| |||| || |||| |||| ||||     
T  43883866 aaggcttaaataagtaaaaggtccatgtaagttggtgcattttttgttttagtccctgtaaatttttttgttgcgagacaaaccctgtatttactaaacg 43883767  T
Q  465 ttttggaactcgtccatgccgtc 487  Q
    ||||||| || ||||||||||||    
T  43883766 ttttggatctagtccatgccgtc 43883744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 358 - 426
Target Start/End: Original strand, 28251922 - 28251990
Alignment:
Q  358 tttaatcaaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||||||||||| | |||| |||||||||| || |||| ||||||||||| |||||||||||    
T  28251922 tttaatcaaggcttaaatatgcaaaaggtccctgtaatttagcgcatttttggttttcgtccctgtaag 28251990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 28848936 - 28848790
Alignment:
Q  218 aagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatat 317  Q
    |||| |||||||||||||   |||||| || |||  ||||| | ||||||||||||| |||  ||||| |||| ||| |||||||||||||||||| | |    
T  28848936 aagtggaagaaatagatggcattgagacgggaaggctttggggtttcatttttcttcataacacaaaaccctcctca-tttgggggaactcaaaaattgt 28848838  T
Q  318 atcggag-agagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    || |||| || ||||| || |||||| || ||||||||||||||||||    
T  28848837 attggaggagggttttggatggtttacatgaattcttcaaatttaatc 28848790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 370 - 424
Target Start/End: Original strand, 40767618 - 40767672
Alignment:
Q  370 ttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||| |||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  40767618 ttaaatatgtaaaaggtctctgtaagtttgcgcgtttttggttttagtccctgta 40767672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 31809987 - 31810048
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||| ||||| |||||||||||    
T  31809987 aaggcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctgtaag 31810048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 43882052 - 43882112
Alignment:
Q  365 aaggcttaaataagtaaaaagtccct-gtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||||| |||||| |||| ||||||| |||| |||||||||||||||||||||    
T  43882052 aaggcttaaataagaaaaaaggcccttgtaagttcgcgcttttttggttttagtccctgta 43882112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 50315317 - 50315377
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||| |||||| ||||||||||||| ||| |||||||||||| ||| |||||||    
T  50315317 aggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtctctgtaag 50315377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 8322521 - 8322580
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||| |||||| ||||||||||||| |||| ||||| ||||| |||||||||||    
T  8322521 ggcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctgtaag 8322580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 359 - 424
Target Start/End: Complemental strand, 13229341 - 13229275
Alignment:
Q  359 ttaatcaaggcttaaataagtaaaaagtccctgtaagttggcgcg-tttttggttttagtccctgta 424  Q
    ||||| |||||||||||| | |||| ||||||||||||| ||||| |||||||||||| ||||||||    
T  13229341 ttaattaaggcttaaatatgcaaaaggtccctgtaagttagcgcgttttttggttttaatccctgta 13229275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 361
Target Start/End: Complemental strand, 5970472 - 5970435
Alignment:
Q  324 gagagtttttgagggtttatataaattcttcaaattta 361  Q
    |||||||||||||||||||||| |||||||||||||||    
T  5970472 gagagtttttgagggtttatatgaattcttcaaattta 5970435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 9419878 - 9419825
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtcc 419  Q
    ||||||||||| |||||| |||| |||||||||||| ||||||| |||||||||    
T  9419878 aggcttaaatatgtaaaaggtccttgtaagttggcgtgtttttgcttttagtcc 9419825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 33259431 - 33259374
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  33259431 ggcttaaatatgtaaattgtccctgtaatttggcgtgtttttggttttcgtccctgta 33259374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 33279590 - 33279533
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  33279590 ggcttaaatatgtaaattgtccctgtaatttggcgtgtttttggttttcgtccctgta 33279533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 34738285 - 34738326
Alignment:
Q  253 ttttggaggttcatttttcttcgtaatgcaaaatcctcttca 294  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  34738285 ttttggaggttcatttttcttcataatacaaaatcctcttca 34738326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 708 - 765
Target Start/End: Complemental strand, 38040957 - 38040900
Alignment:
Q  708 gtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgt 765  Q
    ||||||||||| |||| || |||||| |||||||| |||||||||||||||| |||||    
T  38040957 gtgtaaatacttttggttggtttgcctcttgcacatcttgtgcggggtgaattattgt 38040900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 46604439 - 46604496
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||| |||||| ||||||||||||| ||| |||||||||||| |||| ||||    
T  46604439 ggcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtccttgta 46604496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 50586972 - 50587053
Alignment:
Q  209 ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctc 290  Q
    |||| |||||||| ||||||||||| ||  ||||||||||  | ||| || ||||||||||||||| |||| ||||||||||    
T  50586972 ggaaggagcaagtggaagaaatagaggacattgagagggagggctttggggggttcatttttcttcataatacaaaatcctc 50587053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 16592022 - 16592078
Alignment:
Q  368 gcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  16592022 gcttaaatatgtaaattgtccctgtaatttggcgtgtttttggttttcgtccctgta 16592078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 23412101 - 23412006
Alignment:
Q  217 caagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaa 313  Q
    ||||| ||||||||||||||  || |||||  ||||  || ||||||||||||||||| |||| |||||||||| || |||||| |||||| |||||    
T  23412101 caagtggaagaaatagatgacattaagaggagaagacctttgaggttcatttttcttcataattcaaaatcctcctc-atttggaggaactaaaaaa 23412006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 366 - 422
Target Start/End: Original strand, 26734425 - 26734481
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctg 422  Q
    ||||||||||| |||||| |||| |||||||| |||| ||||||||||| |||||||    
T  26734425 aggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggttttcgtccctg 26734481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 257 - 313
Target Start/End: Complemental strand, 27102932 - 27102877
Alignment:
Q  257 ggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaa 313  Q
    |||||||||||||||||| |||| |||||| |||||| |||||||| ||||||||||    
T  27102932 ggaggttcatttttcttcataatacaaaatgctcttc-atttggggaaactcaaaaa 27102877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 566 - 646
Target Start/End: Original strand, 48242354 - 48242434
Alignment:
Q  566 tctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatg 646  Q
    ||||| |||||||||||||| |||||  ||  ||||| || | ||||| |||||||||| ||||||||||||| |||||||    
T  48242354 tcttttttatggttgaggtctaaacatatggcttttgctttttcttatcatgattggtgccaacaccctattcattgtatg 48242434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 799
Target Start/End: Original strand, 3861636 - 3861699
Alignment:
Q  736 ttgcacaccttgtgcggggtgaatcattgttgttaatgtatctctttttagtttgttaaaaaaa 799  Q
    |||||| ||||||||||||| |||||  ||||||||| ||| ||||||| ||||||| ||||||    
T  3861636 ttgcacgccttgtgcggggtaaatcaccgttgttaatatatatcttttttgtttgttcaaaaaa 3861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 674 - 765
Target Start/End: Complemental strand, 5413068 - 5412977
Alignment:
Q  674 ttggtggtgctcccttgtggtggctaccttgttagtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgt 765  Q
    ||||||||| | |||||| ||||| || ||| |  |||||||||| || |||| ||||||  || ||||||||||||||||| |||||||||    
T  5413068 ttggtggtgtttccttgttgtggccactttgatcttgtaaatacttttcggtggtttgccaattacacaccttgtgcggggtaaatcattgt 5412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 799
Target Start/End: Complemental strand, 11648683 - 11648595
Alignment:
Q  709 tgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaatgtatctctttttagtttgttaaaaaaa 799  Q
    |||||||||||||  ||||||||    |||||||||||||||||||| |||||  ||||||||  ||| || |||||||||||| ||||||    
T  11648683 tgtaaatactcttatgtgatttgtgttttgcacaccttgtgcggggtaaatcacagttgttaa--tatatcattttagtttgttcaaaaaa 11648595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 16673317 - 16673258
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| || ||| |||||||||||| |||||||||    
T  16673317 aaggcttaaatatgtaaatcgtccctgtaattttgcgtgtttttggttttcgtccctgta 16673258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 24437072 - 24437131
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||| ||||||||||||| ||| |||||| ||||| ||| |||||    
T  24437072 aaggcttaaatatgtaaaaggtccctgtaagttcgcgtgttttttgttttcgtcactgta 24437131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 28360767 - 28360826
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| || ||| |||| |||||||||||||  ||||||||||||||| ||||    
T  28360767 aaggcttaaatatgttaaaggtccttgtaagttggcgcacttttggttttagtccttgta 28360826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 33257879 - 33257938
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| |||||| |||||||||||| |||| ||||    
T  33257879 aaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttttgtccttgta 33257938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 33278051 - 33278110
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| |||||| |||||||||||| |||| ||||    
T  33278051 aaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttttgtccttgta 33278110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 7655324 - 7655266
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  || ||||||| |||||| |||||||||||| |||||||||    
T  7655324 aggcttaaatatgtaaatcgttcctgtaatttggcgtgtttttggttttcgtccctgta 7655266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 9626469 - 9626527
Alignment:
Q  368 gcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||| |||||| ||||||||||||| |||  ||||| ||||| |||||||||||    
T  9626469 gcttaaatatgtaaaaggtccctgtaagttcgcgtattttttgttttcgtccctgtaag 9626527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 328 - 366
Target Start/End: Original strand, 33324677 - 33324715
Alignment:
Q  328 gtttttgagggtttatataaattcttcaaatttaatcaa 366  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  33324677 gttttagagggtttatatgaattcttcaaatttaatcaa 33324715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 9627642 - 9627581
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||| ||| ||||||||| |||| ||||| ||||| || ||||||||    
T  9627642 aaggcttaaatatgtaaaaggtctctgtaagttcgcgcattttttgttttcgttcctgtaag 9627581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 51246634 - 51246565
Alignment:
Q  295 atttgggggaactcaaaaaatatatcggagagagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    ||||||||||||||||||| | ||| ||||   | |||||||||||||||| |||| |||||||| ||||    
T  51246634 atttgggggaactcaaaaattgtattggaggagggttttgagggtttatatgaatttttcaaattcaatc 51246565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 52793702 - 52793763
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| || ||| ||||||||||||| || | ||||| ||||| |||||||||||    
T  52793702 aaggcttaaatatgttaaaggtccctgtaagttcgctcattttttgttttcgtccctgtaag 52793763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 2e-36; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 365 - 497
Target Start/End: Complemental strand, 3026942 - 3026811
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||       ||||||||| |||| |||||||||||||||     
T  3026942 aaggcttaaataagtaaaaggtccctgtaagttggcacgtttttggttttagtccctgtaag-ttttttcttgcgaaataaccgttgtaattaccaaacg 3026844  T
Q  465 ttttggaactcgtccatgccgtcaggttccgtg 497  Q
    ||||||||||||||| ||| |||||||||||||    
T  3026843 ttttggaactcgtccctgctgtcaggttccgtg 3026811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 363 - 493
Target Start/End: Complemental strand, 25529980 - 25529851
Alignment:
Q  363 tcaaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaa 462  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||| |||    
T  25529980 tcaaggcttaaataagtaaaaggtccttgtaagttggcgcgtttttggttttagtccctataag-ttttttcttgcgaaacaacccttgtaattactaaa 25529882  T
Q  463 cattttggaactcgtccatgccgtcaggttc 493  Q
      ||||||||||| ||| |||||||| ||||    
T  25529881 tgttttggaactcatccctgccgtcaagttc 25529851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 365 - 497
Target Start/End: Original strand, 3025821 - 3025953
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaaca 464  Q
    ||||||||||||||||||| || ||||||||||||||| ||||| |||||||||| ||||||       ||||| ||||| ||||||||||||| ||||     
T  3025821 aaggcttaaataagtaaaaggttcctgtaagttggcgcattttttgttttagtccatgtaagtttttttcttgcaaaacagcccttgtaattacaaaacg 3025920  T
Q  465 ttttggaactcgtccatgccgtcaggttccgtg 497  Q
    ||||||||||||| | |||||||| ||||||||    
T  3025921 ttttggaactcgttcttgccgtcaagttccgtg 3025953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 366 - 497
Target Start/End: Original strand, 39870453 - 39870584
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    |||||||||||||||||| || | ||||||||| ||||||||| |||||||| | ||||||       ||||||||||| ||||||||||||| |||| |    
T  39870453 aggcttaaataagtaaaaggttcttgtaagttgacgcgttttttgttttagttcttgtaagtttttttcttgcgaaacagcccttgtaattacgaaacgt 39870552  T
Q  466 tttggaactcgtccatgccgtcaggttccgtg 497  Q
    |||||||||||||| ||||||||  |||||||    
T  39870553 tttggaactcgtccttgccgtcaaattccgtg 39870584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 32858755 - 32858858
Alignment:
Q  209 ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactc 308  Q
    ||||||||||||| ||||||||||||||  |||||||||||||  ||||| ||||||||||||||| ||||  ||||||||| || ||||||||||||||    
T  32858755 ggaatgagcaagtggaagaaatagatgacattgagagggaaaggctttgggggttcatttttcttcataatataaaatcctcctc-atttgggggaactc 32858853  T
Q  309 aaaaa 313  Q
    |||||    
T  32858854 aaaaa 32858858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 209 - 364
Target Start/End: Complemental strand, 1133081 - 1132926
Alignment:
Q  209 ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactc 308  Q
    ||||||||||||| || |||||||||||  ||||||||| ||| |||||| |||||||||| |||| |||| |||||  ||| || |||| |||||||||    
T  1133081 ggaatgagcaagtggacgaaatagatgacattgagaggggaaggttttgggggttcattttacttcataatacaaaactctcctc-attttggggaactc 1132983  T
Q  309 aaaaaatatatcgga-gagagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    ||||| | ||| ||| ||| ||||| ||||||||| || ||||||| ||||||||||    
T  1132982 aaaaattgtattggaggagggttttggagggtttacatgaattctttaaatttaatc 1132926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 367 - 497
Target Start/End: Complemental strand, 39872205 - 39872075
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacatt 466  Q
    ||||||||||||||||| |||| ||||||||| ||| |||||||||| ||| | ||||||       ||||||||| | ||||||||||||||| || ||    
T  39872205 ggcttaaataagtaaaaggtccttgtaagttgacgcatttttggtttaagttcgtgtaagtttttttcttgcgaaatagcccttgtaattaccatacgtt 39872106  T
Q  467 ttggaactcgtccatgccgtcaggttccgtg 497  Q
    |||||||| || | ||| |||||||||||||    
T  39872105 ttggaacttgttcctgctgtcaggttccgtg 39872075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 564 - 646
Target Start/End: Complemental strand, 43858232 - 43858150
Alignment:
Q  564 attctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatg 646  Q
    ||||||| |||||||||||||| |||||||||  ||||| |||| ||||| ||||||||||| |||||||||||| |||||||    
T  43858232 attcttttttatggttgaggtctaaacaggtggcttttgcttattcttatcatgattggtggaaacaccctattcattgtatg 43858150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 5377807 - 5377866
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||||||||    
T  5377807 ggcttaaataagtaaaaggtccctgtaaattggcgcattttttgttttagtccctgtaag 5377866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 3150079 - 3150021
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||| |||||||||||||  |||||||||||||||||||||||||    
T  3150079 aggcttaaatatgtaaaaggtccctgtaagttaacgcgtttttggttttagtccctgta 3150021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 5387315 - 5387255
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||||| ||| |||||||||| |||| || |||||||||||||||||||||||    
T  5387315 aggcttaaataagtgaaaggtccctgtaaattggtgcatttttggttttagtccctgtaag 5387255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 364 - 424
Target Start/End: Original strand, 41081799 - 41081859
Alignment:
Q  364 caaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||||||    
T  41081799 caaggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 41081859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 571 - 644
Target Start/End: Complemental strand, 47746309 - 47746236
Alignment:
Q  571 cttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgta 644  Q
    ||||||||||||||| ||||| |||| ||||| |||| | || || ||||||||| ||||||||||||||||||    
T  47746309 cttatggttgaggtctaaacacgtgacttttgcttattcctacaacgattggtggaaacaccctattctttgta 47746236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 648
Target Start/End: Complemental strand, 33335017 - 33334930
Alignment:
Q  560 ttaaattctttcttatggttgaggtcaaaacaggtgaattttgattatacttataatgattggtggcaacaccctattctttgtatgag 648  Q
    ||||||| |||||||||| |||  ||||| |||| |||||||||||||| |||| | ||||||||| |||| || ||||||||||||||    
T  33335017 ttaaattatttcttatggctgaa-tcaaagcaggcgaattttgattatagttatcacgattggtggaaacatcccattctttgtatgag 33334930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 421
Target Start/End: Original strand, 33551586 - 33551641
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccct 421  Q
    |||||||||||| |||||| | |||||||||||||||||||||| ||||||||||||    
T  33551586 aaggcttaaatatgtaaaagg-ccctgtaagttggcgcgttttttgttttagtccct 33551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 366 - 417
Target Start/End: Complemental strand, 27662717 - 27662666
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagt 417  Q
    |||||||||||||||||| ||||| ||||||| |||||||||| ||||||||    
T  27662717 aggcttaaataagtaaaaggtcccggtaagttagcgcgttttttgttttagt 27662666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 32558918 - 32558977
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaa 425  Q
    ||||||||||| |||||| ||||||||||||| ||| |||||| ||||| ||||||||||    
T  32558918 aggcttaaatatgtaaaaggtccctgtaagttcgcgtgttttttgttttcgtccctgtaa 32558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 420
Target Start/End: Complemental strand, 40499313 - 40499258
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccc 420  Q
    |||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||    
T  40499313 aaggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccc 40499258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 48566994 - 48567053
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||| ||||||||||||| ||| |||||||||||| ||| |||||    
T  48566994 aaggcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtcactgta 48567053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 420
Target Start/End: Complemental strand, 41083331 - 41083277
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccc 420  Q
    ||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||    
T  41083331 aggcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtccc 41083277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 24613669 - 24613612
Alignment:
Q  369 cttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||| |||||| ||||||||||||| |||| ||||| ||||| |||||||||||    
T  24613669 cttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctgtaag 24613612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 31795373 - 31795430
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||| |||||| ||||||||||||| ||| |||||||||||| | |||||||    
T  31795373 ggcttaaatacgtaaaaggtccctgtaagttcgcgtgtttttggttttcggccctgta 31795430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 31796893 - 31796840
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccc 420  Q
    |||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||    
T  31796893 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccc 31796840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 55196574 - 55196631
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||| |||| |||||||| |||| |||||||||||||||| ||||    
T  55196574 ggcttaaataagaaaaaggtccttgtaagttcgcgcatttttggttttagtccatgta 55196631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 2420685 - 2420749
Alignment:
Q  300 ggggaactcaaaaaatatatcggagagagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    |||||||||||||| | ||| || ||||||||| |||||||||||| |||| |||||||| ||||    
T  2420685 ggggaactcaaaaattgtattggggagagttttggagggtttatatgaatttttcaaattcaatc 2420749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 11500036 - 11500099
Alignment:
Q  215 agcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaat 279  Q
    ||||| ||||||||||||||||| |||| |||| |||||||||| |||| |||||||||| ||||    
T  11500036 agcaaatagaagaaatagatgatattgaaaggggaagattttgggggtt-atttttcttcataat 11500099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 27320683 - 27320627
Alignment:
Q  440 aaacaacccttgtaattaccaaacattttggaactcgtccatgccgtcaggttccgt 496  Q
    |||||||||||||| ||||  ||| |||||||| |||||| ||||||||||||||||    
T  27320683 aaacaacccttgtatttacgtaaccttttggaaatcgtccttgccgtcaggttccgt 27320627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 365 - 425
Target Start/End: Complemental strand, 32615707 - 32615647
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaa 425  Q
    |||| ||||||| |||||| ||||||||||||| ||| |||||| ||||| ||||||||||    
T  32615707 aaggtttaaatatgtaaaaggtccctgtaagttcgcgtgttttttgtttttgtccctgtaa 32615647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 49855959 - 49855887
Alignment:
Q  214 gagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaat 286  Q
    ||||||||  |||||||||||||  ||||||| | ||| |||||| ||||||||||||||| |||| ||||||    
T  49855959 gagcaagtgaaagaaatagatgacattgagagaggaaggttttgggggttcatttttcttcataatacaaaat 49855887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 33732963 - 33733022
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| |||||| |||||||||||| || ||||||    
T  33732963 aaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgttcctgta 33733022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 425
Target Start/End: Complemental strand, 33781550 - 33781495
Alignment:
Q  370 ttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaa 425  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||| |||| |||||    
T  33781550 ttaaatatgtaaaaggtccctgtaagttcgcgcgttttttgttttcgtccttgtaa 33781495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 54878041 - 54877998
Alignment:
Q  321 ggagagagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    |||||| |||||  ||||||||||||||||||||||||||||||    
T  54878041 ggagagggttttgaagggtttatataaattcttcaaatttaatc 54877998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 424
Target Start/End: Original strand, 3149265 - 3149319
Alignment:
Q  370 ttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||||| ||||||||||||| ||  ||||| ||||||||||| ||||    
T  3149265 ttaaataagtaaaaggtccctgtaagttagccagttttgggttttagtccatgta 3149319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 3707030 - 3707100
Alignment:
Q  209 ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaat 279  Q
    |||| |||||||| ||||||||||||||  ||||||||  |||  ||||| ||||||||||||||| ||||    
T  3707030 ggaaggagcaagtggaagaaatagatgacattgagaggagaaggctttgggggttcatttttcttcataat 3707100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 661
Target Start/End: Complemental strand, 12949745 - 12949699
Alignment:
Q  615 atgattggtggcaacaccctattctttgtatgagtgtccacttgtaa 661  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||||||    
T  12949745 atgattggtggaaacacccgcttctttgtatgggtgtccacttgtaa 12949699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 13645536 - 13645481
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||  ||||||||| |||| ||| |||| |||||||||||||||||||||    
T  13645536 ggcttaaataa--aaaaagtccatgtacgtttgcgcatttttggttttagtccctgta 13645481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 663
Target Start/End: Complemental strand, 18377736 - 18377678
Alignment:
Q  605 tatacttataatgattggtggcaacaccctattctttgtatgagtgtccacttgtaatt 663  Q
    |||| |||| ||||||||||| |||| ||| | ||||| ||||||||||||||||||||    
T  18377736 tatagttatcatgattggtggaaacatcctctcctttgcatgagtgtccacttgtaatt 18377678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 368 - 414
Target Start/End: Original strand, 24612279 - 24612325
Alignment:
Q  368 gcttaaataagtaaaaagtccctgtaagttggcgcgtttttggtttt 414  Q
    ||||||||| |||||| ||||||||||||| |||| |||||||||||    
T  24612279 gcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggtttt 24612325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 27197307 - 27197341
Alignment:
Q  329 tttttgagggtttatataaattcttcaaatttaat 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  27197307 tttttgagggtttatatgaattcttcaaatttaat 27197341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 736 - 798
Target Start/End: Complemental strand, 36625437 - 36625375
Alignment:
Q  736 ttgcacaccttgtgcggggtgaatcattgttgttaatgtatctctttttagtttgttaaaaaa 798  Q
    |||||||||||||||||  ||| |||||| || |||| ||| || ||||||||||||||||||    
T  36625437 ttgcacaccttgtgcggaatgattcattggtggtaatatatatcattttagtttgttaaaaaa 36625375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 26537414 - 26537471
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||||||| |||| | |||| | || |||||||||||||||| ||||||    
T  26537414 ggcttaaataagtaaaaggtccatataagctagcacgtttttggttttagttcctgta 26537471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 33780655 - 33780716
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||| | |||||| ||||||||||||| |||  ||||| ||||| |||||||||||    
T  33780655 aaggcttaaaaatgtaaaatgtccctgtaagttcgcgtattttttgttttcgtccctgtaag 33780716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 48568589 - 48568536
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccc 420  Q
    |||||||||| |||||| ||| ||||||||| ||| |||||||||||| |||||    
T  48568589 ggcttaaatatgtaaaaggtctctgtaagttcgcgtgtttttggttttcgtccc 48568536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 55198374 - 55198317
Alignment:
Q  369 cttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||||||| |||| ||||| ||||||| ||||| |||||| | ||||||||    
T  55198374 cttaaataagtaaaaggtccttgtaaattggcgcattttttgttttaattcctgtaag 55198317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 3e-35; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 636 - 799
Target Start/End: Complemental strand, 13843132 - 13842967
Alignment:
Q  636 ttctttgtatgagtgtccacttgtaatttgtttttgtcttggtggtgctcccttgtggtggctaccttgttagtgtaaatactcttgggtgatttgcccc 735  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||| ||||||  |||| ||||   |  |||||||||||||||||| ||||| ||    
T  13843132 ttctttgtatgagtgtccacttgtaatttgttttgct-ttggtggtgctaccttgttttggccacctgaatcttgtaaatactcttgggtggtttgctcc 13843034  T
Q  736 ttgcacaccttgtgcggggtgaatcattgttgttaa---tgtatctctttttagtttgttaaaaaaa 799  Q
    || |||||||||||||| ||||||||||||||||||   | |||||| |||||||||||||||||||    
T  13843033 ttacacaccttgtgcggagtgaatcattgttgttaatattatatctcattttagtttgttaaaaaaa 13842967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 214 - 364
Target Start/End: Original strand, 13380470 - 13380621
Alignment:
Q  214 gagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaa 313  Q
    |||||||| ||||| |||||||||||| |||||| |||  |||||  |||||||||||||| ||||  |||||| || ||| || |||||||||||||||    
T  13380470 gagcaagtggaagagatagatgatgttaagaggggaaggctttgggagttcatttttcttcataatataaaatcatcctcatttggggggaactcaaaaa 13380569  T
Q  314 atatatcgg-agagagtttttgagggtttatataaattcttcaaatttaatc 364  Q
     | ||| || |||| ||||| ||| ||||| |||||||||||||||||||||    
T  13380570 ttgtattggaagagggttttggagcgtttacataaattcttcaaatttaatc 13380621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 714 - 799
Target Start/End: Original strand, 20805989 - 20806076
Alignment:
Q  714 atactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaa---tgtatctctttttagtttgttaaaaaaa 799  Q
    ||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||   | || ||| |||||||||||||||||||    
T  20805989 atacttttgggtggtttgccccttgcacatcttgtgc-gggtgaatcattgttgttaatattatacctcattttagtttgttaaaaaaa 20806076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 426
Target Start/End: Complemental strand, 11065716 - 11065654
Alignment:
Q  364 caaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||||| |||||| |||| |||||||| |||| ||||||||||| |||||||||||    
T  11065716 caaggcttaaatatgtaaaaggtccttgtaagttcgcgcatttttggttttcgtccctgtaag 11065654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 7796748 - 7796808
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||| |||||| ||||| ||||||| |||| ||||||||||| |||||||||||    
T  7796748 aggcttaaatatgtaaaaggtcccagtaagttcgcgcatttttggtttttgtccctgtaag 7796808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 33939279 - 33939199
Alignment:
Q  209 ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcct 289  Q
    |||| ||||| || ||||||||| ||||| |||||||  ||||| ||||| | ||||||||||||| ||||||||||||||    
T  33939279 ggaaagagcaggtggaagaaatatatgatattgagagaaaaagactttggggattcatttttcttcataatgcaaaatcct 33939199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 1258501 - 1258442
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  1258501 aaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 1258442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 843582 - 843533
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggtttt 414  Q
    |||||||||||| |||||| ||||||||||||| |||| |||||||||||    
T  843582 aaggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggtttt 843533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 708 - 799
Target Start/End: Complemental strand, 26306807 - 26306715
Alignment:
Q  708 gtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaat-gtatctctttttagtttgttaaaaaaa 799  Q
    ||||||||||| |||||||  || ||| |||||||||||||||| |||||  ||||| |||| ||  ||| || |||||||||||||||||||    
T  26306807 gtgtaaatacttttgggtgggtttccctttgcacaccttgtgcgaggtgatccattgatgtttataatatatcattttagtttgttaaaaaaa 26306715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 842186 - 842245
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||| ||| || ||||||||||||| |||| ||||| ||||| |||||||||||    
T  842186 ggcttaaatatgtataaggtccctgtaagttcgcgcattttttgttttcgtccctgtaag 842245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 1256712 - 1256771
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||| ||||| |||||| |||||||||||| |||||||||    
T  1256712 aaggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgta 1256771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 799
Target Start/End: Original strand, 31439646 - 31439709
Alignment:
Q  736 ttgcacaccttgtgcggggtgaatcattgttgttaatgtatctctttttagtttgttaaaaaaa 799  Q
    ||||| ||||||||| |||||| |||| ||||||||| ||| |  |||||||||||||||||||    
T  31439646 ttgcataccttgtgcagggtgattcatcgttgttaatatatattattttagtttgttaaaaaaa 31439709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 367 - 421
Target Start/End: Original strand, 8745432 - 8745486
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccct 421  Q
    |||||||||| |||||  |||||||||| |||||| |||||||||||| ||||||    
T  8745432 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccct 8745486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 26713878 - 26713940
Alignment:
Q  300 ggggaactcaaaaaatatatcggag-agagtttttgagggtttatataaattcttcaaattta 361  Q
    |||||||||||||| | ||| |||| || ||||| |||||||||||| |||||||||||||||    
T  26713878 ggggaactcaaaaattgtattggaggagggttttggagggtttatatgaattcttcaaattta 26713940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 1443417 - 1443474
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||| || ||| |||||||||||||  || |||||||||||| |||||||||    
T  1443417 ggcttaaatatgtgaaaggtccctgtaagttcacgtgtttttggttttcgtccctgta 1443474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 736 - 777
Target Start/End: Complemental strand, 17737687 - 17737646
Alignment:
Q  736 ttgcacaccttgtgcggggtgaatcattgttgttaatgtatc 777  Q
    |||||| ||||||||||||||||||| ||||||| |||||||    
T  17737687 ttgcacgccttgtgcggggtgaatcactgttgtttatgtatc 17737646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 19596341 - 19596402
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||  |||||| |||||| |||| ||||||||||| |||| ||||||    
T  19596341 aaggcttaaatatgtaaattgtccctataagttcgcgcatttttggttttggtccttgtaag 19596402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 30321225 - 30321164
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||| ||||||| |||||| ||| ||||||||| | || ||||||||||| |||||||||||    
T  30321225 aaggtttaaatatgtaaaaggtctctgtaagttcgtgcatttttggttttcgtccctgtaag 30321164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 8e-27; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 366 - 497
Target Start/End: Original strand, 41281873 - 41282004
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacat 465  Q
    |||||||||||||||||| ||||||||||||||  | |||||| ||||||||    ||||        |||||||||||||||||||||||||||||| |    
T  41281873 aggcttaaataagtaaaaggtccctgtaagttgatgtgttttttgttttagttatggtaaatttttttcttgcgaaacaacccttgtaattaccaaacgt 41281972  T
Q  466 tttggaactcgtccatgccgtcaggttccgtg 497  Q
    |||||||||||||| |||||||||||||||||    
T  41281973 tttggaactcgtccctgccgtcaggttccgtg 41282004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 648 - 799
Target Start/End: Original strand, 34424481 - 34424630
Alignment:
Q  648 gtgtccacttgtaatttgtttttgtcttggtggtgctcccttgtggtggctaccttgttagtgtaaatactcttgggtgatttgccccttgcacaccttg 747  Q
    |||||||||||||||||||| || | | |||||||||  ||||| ||||| |||||  | ||||||||||| ||||||| |||||| ||||  |||||||    
T  34424481 gtgtccacttgtaatttgttgttttttaggtggtgctttcttgttgtggccaccttaattgtgtaaatacttttgggtggtttgcctcttg--caccttg 34424578  T
Q  748 tgcggggtgaatcattgttgttaatgtatctctttttagtttgttaaaaaaa 799  Q
    |||||| ||||||||||| ||| || |||||| ||||| |||||||||||||    
T  34424579 tgcgggatgaatcattgtggtttatatatctcattttaatttgttaaaaaaa 34424630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 33489960 - 33489901
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  33489960 aaggcttaaataagtaaaatgtccctgtaagttagcgcgtttttcgttttagtccctgta 33489901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 712 - 799
Target Start/End: Original strand, 14804796 - 14804886
Alignment:
Q  712 aaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgtta---atgtatctctttttagtttgttaaaaaaa 799  Q
    |||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||    | |||||| |||||||||||| ||||||    
T  14804796 aaatgctcttgggtggtttgccccttagacaccttgtgcggggtgaatcattgttgttatttttatatctcattttagtttgttcaaaaaa 14804886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 17668296 - 17668195
Alignment:
Q  211 aatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaa 310  Q
    ||||||||||| ||||||||| ||||  ||||| ||| |||  ||||||||||||||||||||  |||| | |||||||| || ||||| ||||||||||    
T  17668296 aatgagcaagtggaagaaatatatgagattgagtggggaaggctttggaggttcatttttctttataatactaaatcctcctc-atttgtgggaactcaa 17668198  T
Q  311 aaa 313  Q
    |||    
T  17668197 aaa 17668195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 19389964 - 19389819
Alignment:
Q  218 aagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatat 317  Q
    |||| ||||||||| ||||| ||||||    ||| |||||| ||||||||| ||||| |||| |||||||||| ||| ||  |||||||| ||||| | |    
T  19389964 aagtggaagaaataaatgatattgagaaaagaaggttttgggggttcatttatcttcataatacaaaatcctcctcattt--ggggaactaaaaaattgt 19389867  T
Q  318 atcggag-agagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    || |||| ||  |||| ||||||||| || ||||||||||||||||||    
T  19389866 attggaggaggattttggagggtttacatgaattcttcaaatttaatc 19389819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 21916333 - 21916297
Alignment:
Q  328 gtttttgagggtttatataaattcttcaaatttaatc 364  Q
    |||||||||||||||||||||||||||||||||||||    
T  21916333 gtttttgagggtttatataaattcttcaaatttaatc 21916297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 708 - 799
Target Start/End: Complemental strand, 43437329 - 43437237
Alignment:
Q  708 gtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaat-gtatctctttttagtttgttaaaaaaa 799  Q
    ||||||||||| |||||||  || ||| ||||||||||||||||||||||  ||||||| || ||  ||| || |||||||||||||||||||    
T  43437329 gtgtaaatacttttgggtgggtttccctttgcacaccttgtgcggggtgatccattgttatttataatatatcattttagtttgttaaaaaaa 43437237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 16308563 - 16308622
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  ||||||||||||| ||| |||||||||||| |||||||||    
T  16308563 aaggcttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtccctgta 16308622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 420
Target Start/End: Original strand, 38624714 - 38624769
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccc 420  Q
    |||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||    
T  38624714 aaggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccc 38624769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 14570111 - 14570041
Alignment:
Q  295 atttgggggaactcaaaaaatatatcggag-agagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    ||||||| ||||| ||||| ||||| |||| || ||||| |||||||||||| ||||||||||||||||||    
T  14570111 atttgggagaactaaaaaattatattggagtagggttttggagggtttatatgaattcttcaaatttaatc 14570041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 487
Target Start/End: Original strand, 35929523 - 35929642
Alignment:
Q  368 gcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacattt 467  Q
    |||||||||||||||| |||| |||||||| | | | |||||||||| |||||||||||        |||||| ||||||| |||| ||||||||| |||    
T  35929523 gcttaaataagtaaaaggtccttgtaagttcgtgagattttggttttcgtccctgtaagtttttttgttgcgagacaacccctgtatttaccaaacgttt 35929622  T
Q  468 tggaactcgtccatgccgtc 487  Q
    ||  | |||||| |||||||    
T  35929623 tgacattcgtccctgccgtc 35929642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 38568438 - 38568368
Alignment:
Q  295 atttgggggaactcaaaaaatatatcggag-agagtttttgagggtttatataaattcttcaaatttaatc 364  Q
    ||||||||||||| ||||| ||||| |||| || ||||| | |||||||||| ||||||||||||||||||    
T  38568438 atttgggggaactaaaaaattatattggaggagggttttggggggtttatatgaattcttcaaatttaatc 38568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 706 - 799
Target Start/End: Original strand, 43465514 - 43465608
Alignment:
Q  706 tagtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaat-gtatctctttttagtttgttaaaaaaa 799  Q
    |||||||||||||||||||||  |  ||| ||||||||||||||||||||||  || ||||||| ||  ||| || |||||||||||| ||||||    
T  43465514 tagtgtaaatactcttgggtggctatccctttgcacaccttgtgcggggtgatccactgttgtttataatatatcattttagtttgttcaaaaaa 43465608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 364
Target Start/End: Original strand, 9096295 - 9096399
Alignment:
Q  260 ggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatatatcggag-agagtttttgagggtttatataaattcttcaaat 358  Q
    |||||| |||||||| |||| ||||||| || | ||||||||||||||||| || | ||| |||| ||  |||| |||||||||||| ||||||||||||    
T  9096295 ggttcacttttcttcataatacaaaatcttcct-aatttgggggaactcaacaattgtattggaggaggattttggagggtttatatgaattcttcaaat 9096393  T
Q  359 ttaatc 364  Q
    | ||||    
T  9096394 tcaatc 9096399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 6491154 - 6491212
Alignment:
Q  254 tttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaa 313  Q
    ||||| ||||||||||||||| |||| ||||||| || || |||||||||||||||||||    
T  6491154 tttgggggttcatttttcttcataatacaaaatcttcctc-atttgggggaactcaaaaa 6491212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 9670959 - 9671018
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||| ||| ||||||||||||| |||||| |||| ||||| ||||| |||||||||||    
T  9670959 ggcttacatacgtaaaaagtccctctaagttcgcgctttttttgttttcgtccctgtaag 9671018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 9672411 - 9672352
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaa 425  Q
    |||||||||||  ||||| ||||||||||||| |||| ||||| ||||| ||||||||||    
T  9672411 aggcttaaatatataaaaggtccctgtaagttcgcgcattttttgttttcgtccctgtaa 9672352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 38626231 - 38626172
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||| ||||||||||||| ||  |||||||||||| |||| ||||    
T  38626231 aaggcttaaatatgtaaaaggtccctgtaagttcgcatgtttttggttttcgtccatgta 38626172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 2561043 - 2561107
Alignment:
Q  223 gaagaaatagatgatgttgag-agggaaagattttggaggttcatttttcttcgtaatgcaaaatc 287  Q
    ||||||||||||||  ||||| ||||||||  |||||||||||| ||||||||||||| |||||||    
T  2561043 gaagaaatagatgacattgagaagggaaag-ctttggaggttcacttttcttcgtaatacaaaatc 2561107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 763
Target Start/End: Complemental strand, 22031038 - 22030961
Alignment:
Q  686 ccttgtggtggctaccttgttagtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcatt 763  Q
    |||||| ||||| |||||| |  |||||||||| || |||| ||||||  ||||||| |||||||||||| |||||||    
T  22031038 ccttgttgtggccaccttgatcttgtaaatactattcggtggtttgccttttgcacatcttgtgcggggtaaatcatt 22030961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 35931405 - 35931348
Alignment:
Q  369 cttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||| |||||| ||||||||||||| ||| | |||||||||| |||| ||||||    
T  35931405 cttaaataggtaaaaggtccctgtaagttcgcgagattttggttttcgtccttgtaag 35931348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 38120332 - 38120271
Alignment:
Q  209 ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcattttt 270  Q
    |||||||| |||| ||| ||||||| ||  |||||||||||||| |||||||||| ||||||    
T  38120332 ggaatgagtaagtggaacaaatagaagacattgagagggaaagactttggaggttaattttt 38120271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 693 - 799
Target Start/End: Original strand, 3539 - 3645
Alignment:
Q  693 gtggctaccttgttagtgtaaatactcttgggtgatttgccccttgcacaccttgtgcggggtgaatcattgttgttaatgtatctctttttagtttgtt 792  Q
    ||||| |||||| | ||||||||||| |||| || |||| | ||||| ||||||||||||||||||||||||| ||| || ||| || ||||||||||||    
T  3539 gtggccaccttgattgtgtaaatacttttggttggtttggctcttgcgcaccttgtgcggggtgaatcattgtggtttatatatatcattttagtttgtt 3638  T
Q  793 aaaaaaa 799  Q
     ||||||    
T  3639 caaaaaa 3645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 4e-16; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 11148349 - 11148401
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtc 418  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  11148349 aggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggttttagtc 11148401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 2671540 - 2671598
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||    
T  2671540 aggcttaaataagaaaaaggtccctgtaagttcgcgcatttttggttttagtccctgta 2671598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 4906127 - 4906188
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||||||    
T  4906127 aaggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgtaag 4906188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 315
Target Start/End: Complemental strand, 27485381 - 27485293
Alignment:
Q  226 gaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaat 315  Q
    ||||| |||||| |||| ||||||||| ||||| ||||||||||||||| |||| |||||||||| || ||||| |||||||| ||||||    
T  27485381 gaaatggatgatattgaaagggaaagactttgggggttcatttttcttcataatacaaaatcctcctc-atttgagggaactcgaaaaat 27485293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 4931998 - 4932057
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||||||    
T  4931998 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgtaag 4932057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 20947653 - 20947606
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggtt 412  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  20947653 aaggcttaaataagtaaaaagtccctctaagttggcgcatttttggtt 20947606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 365 - 422
Target Start/End: Complemental strand, 4933392 - 4933335
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctg 422  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||    
T  4933392 aaggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctg 4933335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 369 - 471
Target Start/End: Original strand, 28426836 - 28426938
Alignment:
Q  369 cttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaagnnnnnnncttgcgaaacaacccttgtaattaccaaacatttt 468  Q
    ||||||||||||||| |||| ||||||||||||| ||||| |||||||||| |||||         ||||||||||| || |||| ||| ||||||||||    
T  28426836 cttaaataagtaaaaggtccatgtaagttggcgcattttttgttttagtccttgtaaatttttttgttgcgaaacaaaccctgtatttatcaaacatttt 28426935  T
Q  469 gga 471  Q
    |||    
T  28426936 gga 28426938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 29756270 - 29756327
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctg 422  Q
    |||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||    
T  29756270 aaggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctg 29756327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 2673023 - 2672963
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||||||||||  ||  ||||||||||||| |||||||||||||||| ||||||    
T  2673023 aggcttaaataagtaaaagatctatgtaagttggcgcatttttggttttagtccttgtaag 2672963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 29757668 - 29757608
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||| |||||| |||||||||||||  ||| ||||||||||| |||||||||||    
T  29757668 aggcttaaatatgtaaaaggtccctgtaagttcacgcatttttggttttcgtccctgtaag 29757608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 305
Target Start/End: Original strand, 31428740 - 31428831
Alignment:
Q  214 gagcaagtagaagaaatagatgatgttgaga-gggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaa 305  Q
    |||||| ||||| ||||||||||| |||||| ||||||| ||||||  ||| |||||| |||||||| ||||| ||||||| |||||||||||    
T  31428740 gagcaaatagaaaaaatagatgatattgagaggggaaagcttttgggagtttatttttattcgtaatacaaaaccctcttc-atttgggggaa 31428831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 34236670 - 34236586
Alignment:
Q  210 gaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcctcttca 294  Q
    |||||||||||| || |||||| ||||| |||||| |  |||| ||||||||||||||||||||| || | |||||| |||||||    
T  34236670 gaatgagcaagtggacgaaataaatgatattgagatgagaagactttggaggttcatttttcttcatagtacaaaattctcttca 34236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 367 - 422
Target Start/End: Complemental strand, 4907520 - 4907465
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctg 422  Q
    |||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||    
T  4907520 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctg 4907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 18597915 - 18597856
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  18597915 aaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 18597856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 48713523 - 48713464
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  48713523 aaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 48713464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 53013546 - 53013609
Alignment:
Q  224 aagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatc 287  Q
    |||||||||||||  ||||||| |||| | ||||||||||||||||||||| |||| |||||||    
T  53013546 aagaaatagatgacattgagagagaaaaactttggaggttcatttttcttcataatacaaaatc 53013609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 19994497 - 19994555
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  19994497 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 19994555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 19996114 - 19996056
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  19996114 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttggtccctgta 19996056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 22307670 - 22307728
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| | |||| ||||||||||||| ||  ||||||||||||||||||||||    
T  22307670 aggcttaaatatgcaaaaggtccctgtaagttcgcatgtttttggttttagtccctgta 22307728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 22309194 - 22309140
Alignment:
Q  370 ttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||| |||||  ||||||||||||| ||| ||||||||||||||||||||||    
T  22309194 ttaaatatgtaaatggtccctgtaagttcgcgtgtttttggttttagtccctgta 22309140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 729 - 799
Target Start/End: Original strand, 24275076 - 24275146
Alignment:
Q  729 ttgccccttgcacaccttgtgcggggtgaatcattgttgttaatgtatctctttttagtttgttaaaaaaa 799  Q
    ||||||||||||| |||||||| |||| |||||  ||||||||| ||| || |||| ||||||||||||||    
T  24275076 ttgccccttgcacgccttgtgcagggtaaatcaccgttgttaatatatatcatttttgtttgttaaaaaaa 24275146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 34538125 - 34538183
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||| ||||| ||||||| || |||||||||||||||||| ||||    
T  34538125 aggcttaaatatgtaaaaggtcccggtaagttagcacgtttttggttttagtccttgta 34538183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 54724038 - 54723972
Alignment:
Q  223 gaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttcgtaatgcaaaatcct 289  Q
    ||||||||||||||  ||||||||  || |||||||||||| |||||||||| |||| |||||||||    
T  54724038 gaagaaatagatgacattgagaggagaacattttggaggtttatttttcttcataatacaaaatcct 54723972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 21081274 - 21081378
Alignment:
Q  209 ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttgga-ggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaact 307  Q
    |||| |||||||| ||||||||||||||  ||||||||| ||  ||||||| ||||||||||||||| |||  ||||| |||| || |||||||| ||||    
T  21081274 ggaaggagcaagtggaagaaatagatgacattgagaggggaatgttttggagggttcatttttcttcataaaacaaaaccctcctc-atttggggtaact 21081372  T
Q  308 caaaaa 313  Q
     |||||    
T  21081373 taaaaa 21081378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 35786737 - 35786680
Alignment:
Q  369 cttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    |||||||| |||||| ||||||||||||| |||| ||||||||||| |||| ||||||    
T  35786737 cttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccttgtaag 35786680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 35959177 - 35959273
Alignment:
Q  265 atttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaaatatatcggag-agagtttttgagggtttatataaattcttcaaattta 361  Q
    |||||||||| |||| ||||| |||| ||| |||||||||||| ||||  | ||| |||| || ||||| | ||||||||||||||||||||||||||    
T  35959177 atttttcttcataatacaaaaccctcctca-tttgggggaactaaaaagttgtattggaggagcgttttggggggtttatataaattcttcaaattta 35959273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 23703923 - 23703863
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||| |||||| |||||| |||||| |||| |||||||||||  ||||||||||    
T  23703923 aggcttaaatatgtaaaaggtccctctaagttcgcgcatttttggttttcatccctgtaag 23703863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 33609402 - 33609346
Alignment:
Q  368 gcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||| |||||| ||||||||||||| ||| |||||||||||| |||| ||||    
T  33609402 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccttgta 33609346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 34539858 - 34539800
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||||||||||  |||| |||||||| ||||||||||||||||| || |||||    
T  34539858 aaggcttaaataagtaaag-gtccatgtaagttagcgcgtttttggttttaatctctgta 34539800  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 42977196 - 42977255
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||| ||||| |||||| |||||||||||| |||||||||    
T  42977196 aaggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgta 42977255  T

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Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 42978980 - 42978921
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||| ||||| |||||| |||||||||||| |||||||||    
T  42978980 aaggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgta 42978921  T

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Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 44251603 - 44251662
Alignment:
Q  365 aaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||||| |||||  |||||||||| |||||| |||||||||||| |||| ||||    
T  44251603 aaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgta 44251662  T

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Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 359
Target Start/End: Complemental strand, 48417712 - 48417606
Alignment:
Q  254 tttggaggttcatttttcttcgtaatgcaa-aatcctcttcaatttgggggaactcaaaaaatatatcgga-gagagtttttgagggtttatataaattc 351  Q
    ||||| ||||| ||||||||| |||| ||| |||| |||| |||||||||||||||||||| | ||| ||| |||  |||| |||||| ||||| |||||    
T  48417712 tttgggggttcgtttttcttcataatacaagaatcttctt-aatttgggggaactcaaaaattgtattggaggaggattttggagggtctatatgaattc 48417614  T
Q  352 ttcaaatt 359  Q
    ||||||||    
T  48417613 ttcaaatt 48417606  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 54123605 - 54123547
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  |||||||||| |||||  |||||||||||| |||||||||    
T  54123605 aggcttaaatatgtaaatcgtccctgtaatttggcatgtttttggttttcgtccctgta 54123547  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 55949013 - 55948955
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    ||||||||||| |||||  |||| ||||| |||||| |||||||||||| |||||||||    
T  55949013 aggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgta 55948955  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 32082692 - 32082635
Alignment:
Q  367 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||||||||| |||||  |||| ||||| |||||| |||||||||||| |||||||||    
T  32082692 ggcttaaatatgtaaatcgtccgtgtaatttggcgtgtttttggttttcgtccctgta 32082635  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 41495775 - 41495710
Alignment:
Q  209 ggaatgagcaagtagaagaaatagatgatgttgagagggaaagattttggaggttcatttttcttc 274  Q
    |||| ||| |||| ||||||||||||||  || ||||||||||| ||| | |||||||||||||||    
T  41495775 ggaaagagaaagtggaagaaatagatgacattaagagggaaagacttttggggttcatttttcttc 41495710  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 54205815 - 54205867
Alignment:
Q  260 ggttcatttttcttcgtaatgcaaaatcctcttcaatttgggggaactcaaaaa 313  Q
    ||||||||||||||| |||  |||||||||| || |||||||||||||||||||    
T  54205815 ggttcatttttcttcataaaacaaaatcctcctc-atttgggggaactcaaaaa 54205867  T

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Target: scaffold0129 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 4317 - 4257
Alignment:
Q  366 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgtaag 426  Q
    ||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||||||    
T  4317 aggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgtaag 4257  T

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Target: scaffold0280 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 424
Target Start/End: Original strand, 12125 - 12188
Alignment:
Q  361 aatcaaggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 424  Q
    |||| ||||||||||| |||||| || || ||||||| ||| |||||||||||| |||||||||    
T  12125 aatctaggcttaaatatgtaaaaggttccggtaagttcgcgtgtttttggttttcgtccctgta 12188  T

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Target: scaffold1185 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 671
Target Start/End: Original strand, 2103 - 2169
Alignment:
Q  605 tatacttataatgattggtggcaacaccctattctttgtatgagtgtccacttgtaatttgtttttg 671  Q
    ||||||||| |||| |||||| |||| ||| | |||||||||||| ||||| |||||||| ||||||    
T  2103 tatacttatcatgaatggtggaaacatcctctcctttgtatgagtatccacgtgtaatttttttttg 2169  T

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