View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4613-Insertion-8 (Length: 422)
Name: NF4613-Insertion-8
Description: NF4613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4613-Insertion-8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 8 - 422
Target Start/End: Complemental strand, 36575018 - 36574604
Alignment:
| Q |
8 |
agattgacaatgctagagctgctatccggtggagtaccgattaccttctcaaagccgccaccacgactccagacacgttatacgtccaagtgagtggccg |
107 |
Q |
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| T |
36575018 |
agattgacaatgctagagctgctatccggtggagtaccgattaccttctcaaagccgccaccacgactccagacacgttatacgtccaagtgagtggccg |
36574919 |
T |
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| Q |
108 |
ctctgagaatgttttgggtgcgcgatcacacattttattagttaaaaaattgtttctaaatatcctaaatatttgcaggttggagagccgaacatggatc |
207 |
Q |
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| T |
36574918 |
ctctgagaatgttttgggtgcgcgatcacacattttattagttaaaaaattgtttctaaatatcctaaatatttgcaggttggagagccgaacatggatc |
36574819 |
T |
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| Q |
208 |
acaggtgttgggaaaggccggaggacatggacactccacgcaatgtgtataaggtctcggctcaaaatccaggttctgatgtcgcggctgagacggctgc |
307 |
Q |
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| T |
36574818 |
acaggtgttgggaaaggccggaggacatggacactccacgcaatgtgtataaggtctcggctcaaaatccaggttctgatgtcgcggctgagacggctgc |
36574719 |
T |
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| Q |
308 |
tgcattggcagcgtcttcattagtattcagagatacagatccatcatattcctccaaattgcttcaagcagccatccaagtatgttcctcttctaaaaca |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36574718 |
tgcattggcagcgtcttcattagtattcagagatacagatccatcatattcctccaaattgcttcaagcagccatccaagtatgttcctcttctaaaaca |
36574619 |
T |
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| Q |
408 |
caatttttcctagtt |
422 |
Q |
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| T |
36574618 |
caatttttcctagtt |
36574604 |
T |
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