View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4615-Insertion-3 (Length: 987)

Name: NF4615-Insertion-3
Description: NF4615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4615-Insertion-3
NF4615-Insertion-3
[»] chr6 (28 HSPs)
chr6 (7-316)||(30936975-30937283)
chr6 (880-987)||(13727399-13727507)
chr6 (880-987)||(21479492-21479600)
chr6 (880-985)||(20711720-20711826)
chr6 (880-987)||(27788688-27788796)
chr6 (888-987)||(33774115-33774215)
chr6 (880-977)||(21280554-21280651)
chr6 (880-987)||(19737692-19737800)
chr6 (880-987)||(24710999-24711107)
chr6 (888-987)||(28075781-28075881)
chr6 (880-977)||(1155849-1155946)
chr6 (187-423)||(31005652-31005905)
chr6 (888-987)||(17353952-17354052)
chr6 (880-961)||(34397882-34397963)
chr6 (880-960)||(27314178-27314259)
chr6 (880-987)||(30832524-30832632)
chr6 (892-984)||(235236-235330)
chr6 (652-740)||(31006040-31006130)
chr6 (888-959)||(6159465-6159536)
chr6 (324-423)||(30937403-30937502)
chr6 (891-977)||(21183686-21183772)
chr6 (888-977)||(2477592-2477681)
chr6 (554-639)||(30937688-30937778)
chr6 (888-977)||(20611799-20611888)
chr6 (888-959)||(30121789-30121860)
chr6 (670-735)||(30937843-30937909)
chr6 (903-953)||(4036981-4037031)
chr6 (512-556)||(30937618-30937662)
[»] chr4 (54 HSPs)
chr4 (880-987)||(54780777-54780885)
chr4 (880-987)||(32915385-32915493)
chr4 (880-987)||(34768573-34768681)
chr4 (880-987)||(38209590-38209698)
chr4 (880-987)||(43455530-43455638)
chr4 (888-987)||(34027579-34027679)
chr4 (880-976)||(37514671-37514767)
chr4 (880-977)||(35779325-35779421)
chr4 (888-977)||(37777230-37777319)
chr4 (888-987)||(2790748-2790848)
chr4 (880-987)||(10978900-10979008)
chr4 (880-984)||(32128588-32128692)
chr4 (888-987)||(47128987-47129087)
chr4 (880-984)||(48209244-48209348)
chr4 (881-977)||(5128842-5128938)
chr4 (880-987)||(19498504-19498610)
chr4 (880-987)||(1105532-1105640)
chr4 (888-957)||(10428204-10428273)
chr4 (892-977)||(54083253-54083338)
chr4 (880-956)||(17679432-17679508)
chr4 (889-987)||(13460207-13460306)
chr4 (894-987)||(40089516-40089609)
chr4 (880-987)||(16845021-16845130)
chr4 (880-946)||(51691914-51691980)
chr4 (900-977)||(4167910-4167987)
chr4 (880-960)||(51964736-51964819)
chr4 (888-964)||(39655261-39655337)
chr4 (888-970)||(16882402-16882484)
chr4 (880-961)||(16922328-16922409)
chr4 (888-977)||(36118465-36118554)
chr4 (888-977)||(52468297-52468386)
chr4 (888-976)||(36178684-36178772)
chr4 (880-944)||(9578663-9578728)
chr4 (888-977)||(27112041-27112130)
chr4 (888-977)||(35465118-35465206)
chr4 (891-953)||(2135331-2135393)
chr4 (893-977)||(40217243-40217327)
chr4 (894-977)||(24396945-24397028)
chr4 (888-959)||(39329399-39329470)
chr4 (888-977)||(37744916-37745006)
chr4 (888-973)||(10042007-10042092)
chr4 (892-987)||(24969437-24969523)
chr4 (880-929)||(55255316-55255365)
chr4 (896-959)||(36362886-36362949)
chr4 (894-959)||(29425187-29425252)
chr4 (892-987)||(38352276-38352362)
chr4 (883-934)||(23508512-23508564)
chr4 (888-959)||(45656204-45656275)
chr4 (894-950)||(11906904-11906960)
chr4 (889-977)||(15735106-15735189)
chr4 (929-987)||(23509846-23509905)
chr4 (888-923)||(24614018-24614053)
chr4 (909-950)||(11911158-11911199)
chr4 (888-921)||(30507129-30507162)
[»] chr8 (33 HSPs)
chr8 (880-987)||(45475812-45475920)
chr8 (880-985)||(5860744-5860849)
chr8 (880-987)||(23606629-23606737)
chr8 (880-987)||(23798261-23798369)
chr8 (880-987)||(30883324-30883432)
chr8 (880-987)||(2952221-2952329)
chr8 (880-987)||(13534687-13534794)
chr8 (880-987)||(13624227-13624334)
chr8 (880-977)||(37430158-37430255)
chr8 (892-987)||(10917386-10917482)
chr8 (888-984)||(41879180-41879276)
chr8 (892-987)||(42600777-42600873)
chr8 (888-977)||(8102918-8103007)
chr8 (880-973)||(3048517-3048610)
chr8 (888-977)||(7944530-7944619)
chr8 (880-979)||(34789862-34789961)
chr8 (888-973)||(5973115-5973200)
chr8 (888-977)||(11290190-11290279)
chr8 (902-977)||(5942702-5942777)
chr8 (888-977)||(5721565-5721654)
chr8 (888-977)||(39332413-39332502)
chr8 (888-959)||(30674411-30674482)
chr8 (888-977)||(41677181-41677271)
chr8 (888-977)||(15078764-15078853)
chr8 (888-977)||(15167423-15167512)
chr8 (888-979)||(8646210-8646300)
chr8 (888-959)||(23941099-23941170)
chr8 (888-977)||(25561503-25561590)
chr8 (888-958)||(14509991-14510059)
chr8 (888-926)||(34868185-34868223)
chr8 (888-925)||(9108551-9108588)
chr8 (910-946)||(5757117-5757153)
chr8 (888-977)||(34048713-34048804)
[»] chr5 (41 HSPs)
chr5 (880-987)||(27079006-27079114)
chr5 (880-987)||(28822339-28822447)
chr5 (880-987)||(34756363-34756471)
chr5 (880-979)||(36187876-36187975)
chr5 (888-987)||(9364286-9364386)
chr5 (880-987)||(19523194-19523302)
chr5 (880-984)||(38869360-38869464)
chr5 (888-986)||(16799332-16799431)
chr5 (880-987)||(30854324-30854432)
chr5 (880-987)||(2274885-2274993)
chr5 (880-987)||(15480086-15480194)
chr5 (888-987)||(16198799-16198899)
chr5 (880-961)||(7338021-7338102)
chr5 (880-977)||(31194609-31194705)
chr5 (880-987)||(16592071-16592179)
chr5 (880-979)||(22986555-22986654)
chr5 (880-977)||(23284059-23284156)
chr5 (893-977)||(27924088-27924172)
chr5 (888-987)||(40389541-40389641)
chr5 (888-977)||(7670930-7671020)
chr5 (880-977)||(31881431-31881527)
chr5 (888-977)||(36868881-36868970)
chr5 (888-977)||(2530902-2530991)
chr5 (888-977)||(34425909-34425998)
chr5 (888-977)||(2024647-2024736)
chr5 (888-977)||(14318390-14318479)
chr5 (888-977)||(26718954-26719043)
chr5 (888-977)||(26988698-26988787)
chr5 (888-977)||(33037786-33037875)
chr5 (888-977)||(2412094-2412183)
chr5 (888-955)||(22648741-22648808)
chr5 (888-959)||(24395763-24395834)
chr5 (888-974)||(10543682-10543768)
chr5 (888-977)||(1366531-1366620)
chr5 (888-979)||(40794332-40794423)
chr5 (888-977)||(10407467-10407556)
chr5 (902-959)||(15639667-15639724)
chr5 (902-959)||(41911636-41911693)
chr5 (888-926)||(606211-606249)
chr5 (888-977)||(11242323-11242412)
chr5 (888-951)||(17344988-17345051)
[»] chr3 (34 HSPs)
chr3 (880-987)||(47467682-47467790)
chr3 (880-987)||(54619203-54619311)
chr3 (880-977)||(42098810-42098907)
chr3 (888-987)||(3953904-3954004)
chr3 (888-987)||(21582769-21582869)
chr3 (888-987)||(34290644-34290744)
chr3 (888-987)||(44708475-44708575)
chr3 (880-987)||(53149314-53149422)
chr3 (888-984)||(53506892-53506988)
chr3 (888-986)||(8073346-8073444)
chr3 (880-977)||(38681093-38681190)
chr3 (888-984)||(27078577-27078673)
chr3 (888-984)||(27084374-27084470)
chr3 (880-987)||(43207238-43207345)
chr3 (888-987)||(54407166-54407265)
chr3 (880-958)||(36716025-36716103)
chr3 (888-977)||(37168376-37168465)
chr3 (880-974)||(9878687-9878781)
chr3 (892-977)||(50939245-50939330)
chr3 (880-977)||(18372488-18372589)
chr3 (882-977)||(36605974-36606069)
chr3 (880-986)||(50258623-50258731)
chr3 (888-959)||(8420353-8420424)
chr3 (888-959)||(32319163-32319234)
chr3 (888-979)||(28689369-28689460)
chr3 (888-981)||(49393095-49393187)
chr3 (888-977)||(54574835-54574924)
chr3 (888-959)||(26279569-26279640)
chr3 (891-944)||(23641329-23641382)
chr3 (915-987)||(29620423-29620496)
chr3 (888-955)||(42453435-42453502)
chr3 (888-973)||(25855435-25855519)
chr3 (892-986)||(48157138-48157223)
chr3 (891-959)||(789963-790031)
[»] chr1 (40 HSPs)
chr1 (880-987)||(5316686-5316794)
chr1 (880-987)||(14146306-14146414)
chr1 (880-987)||(23185433-23185541)
chr1 (880-973)||(6771812-6771905)
chr1 (880-987)||(3406424-3406532)
chr1 (880-987)||(3440288-3440396)
chr1 (880-987)||(4971617-4971725)
chr1 (880-987)||(5027555-5027663)
chr1 (888-987)||(9173030-9173130)
chr1 (888-987)||(9181012-9181112)
chr1 (888-987)||(27559643-27559743)
chr1 (880-987)||(44655747-44655855)
chr1 (881-987)||(1366878-1366985)
chr1 (880-977)||(16140072-16140169)
chr1 (880-977)||(50881447-50881544)
chr1 (892-987)||(19955723-19955819)
chr1 (888-977)||(17168973-17169062)
chr1 (880-961)||(21740936-21741017)
chr1 (892-976)||(40501801-40501885)
chr1 (880-987)||(41697136-41697244)
chr1 (888-977)||(51607446-51607536)
chr1 (880-963)||(6889642-6889725)
chr1 (880-963)||(6891488-6891571)
chr1 (888-959)||(38547043-38547114)
chr1 (892-984)||(13913491-13913585)
chr1 (880-959)||(22865460-22865538)
chr1 (889-981)||(38853535-38853627)
chr1 (888-977)||(39134729-39134819)
chr1 (892-987)||(44895658-44895748)
chr1 (888-977)||(45758511-45758600)
chr1 (902-977)||(5533329-5533404)
chr1 (894-979)||(26803963-26804045)
chr1 (888-979)||(33170774-33170865)
chr1 (888-959)||(35392305-35392375)
chr1 (888-977)||(6221695-6221783)
chr1 (880-929)||(27906728-27906777)
chr1 (888-977)||(50146313-50146402)
chr1 (888-977)||(43235775-43235866)
chr1 (888-942)||(17322630-17322684)
chr1 (903-977)||(10925976-10926050)
[»] chr7 (34 HSPs)
chr7 (880-987)||(8171538-8171646)
chr7 (880-987)||(10955479-10955587)
chr7 (880-984)||(18776765-18776869)
chr7 (880-987)||(12596286-12596394)
chr7 (892-987)||(20091292-20091388)
chr7 (880-987)||(29077215-29077323)
chr7 (880-961)||(26254015-26254096)
chr7 (888-987)||(24525692-24525792)
chr7 (888-984)||(10329417-10329513)
chr7 (880-960)||(33162338-33162418)
chr7 (880-987)||(38414875-38414983)
chr7 (892-987)||(48983855-48983951)
chr7 (880-977)||(19692100-19692197)
chr7 (888-987)||(47984976-47985077)
chr7 (893-977)||(9021812-9021896)
chr7 (888-977)||(8239693-8239782)
chr7 (892-987)||(23551081-23551178)
chr7 (888-977)||(2611269-2611358)
chr7 (888-977)||(23859079-23859168)
chr7 (880-977)||(28749716-28749812)
chr7 (888-959)||(6765688-6765759)
chr7 (888-977)||(7398457-7398546)
chr7 (888-977)||(12981332-12981421)
chr7 (888-977)||(36891584-36891673)
chr7 (888-977)||(36902931-36903020)
chr7 (888-951)||(23744828-23744891)
chr7 (889-959)||(21763595-21763665)
chr7 (888-977)||(20153207-20153296)
chr7 (892-959)||(18201161-18201228)
chr7 (888-937)||(27237430-27237479)
chr7 (888-959)||(12419502-12419573)
chr7 (937-987)||(25010428-25010479)
chr7 (895-977)||(23020498-23020579)
chr7 (903-959)||(38971277-38971333)
[»] chr2 (32 HSPs)
chr2 (880-987)||(3155211-3155319)
chr2 (880-987)||(3953000-3953108)
chr2 (880-987)||(4505888-4505996)
chr2 (880-987)||(6965001-6965109)
chr2 (888-977)||(24410442-24410531)
chr2 (880-977)||(29939862-29939959)
chr2 (880-987)||(10762565-10762673)
chr2 (880-977)||(7162789-7162886)
chr2 (888-987)||(9046023-9046124)
chr2 (880-987)||(26716122-26716231)
chr2 (888-984)||(8907087-8907183)
chr2 (880-987)||(12337448-12337556)
chr2 (892-977)||(27506752-27506837)
chr2 (880-961)||(34693996-34694077)
chr2 (880-961)||(34716408-34716489)
chr2 (880-956)||(40636164-40636240)
chr2 (888-977)||(16097013-16097102)
chr2 (888-977)||(24035553-24035642)
chr2 (880-956)||(5952717-5952791)
chr2 (888-977)||(38400803-38400892)
chr2 (888-959)||(13800552-13800624)
chr2 (888-959)||(28425718-28425789)
chr2 (888-974)||(12134048-12134134)
chr2 (888-977)||(21665708-21665797)
chr2 (888-958)||(7742141-7742212)
chr2 (891-959)||(16227379-16227447)
chr2 (888-959)||(42029168-42029239)
chr2 (908-982)||(22727530-22727604)
chr2 (913-977)||(37182675-37182739)
chr2 (888-974)||(11912765-11912851)
chr2 (888-958)||(10252437-10252510)
chr2 (892-926)||(8327674-8327708)
[»] scaffold0039 (1 HSPs)
scaffold0039 (888-987)||(106533-106633)
[»] scaffold0070 (1 HSPs)
scaffold0070 (880-987)||(1338-1446)
[»] scaffold1590 (1 HSPs)
scaffold1590 (888-976)||(266-354)
[»] scaffold0012 (1 HSPs)
scaffold0012 (888-977)||(206497-206586)
[»] scaffold0182 (1 HSPs)
scaffold0182 (891-970)||(24004-24083)
[»] scaffold0018 (1 HSPs)
scaffold0018 (888-977)||(173518-173607)
[»] scaffold0097 (1 HSPs)
scaffold0097 (888-977)||(38931-39020)
[»] scaffold1320 (1 HSPs)
scaffold1320 (888-977)||(1360-1449)
[»] scaffold0022 (2 HSPs)
scaffold0022 (888-959)||(40109-40182)
scaffold0022 (888-959)||(138169-138242)
[»] scaffold0007 (1 HSPs)
scaffold0007 (888-977)||(230867-230956)
[»] scaffold0003 (1 HSPs)
scaffold0003 (906-959)||(351360-351413)
[»] scaffold0001 (2 HSPs)
scaffold0001 (880-937)||(183106-183163)
scaffold0001 (933-985)||(181916-181969)
[»] scaffold0227 (2 HSPs)
scaffold0227 (888-925)||(16123-16160)
scaffold0227 (915-979)||(16031-16095)


Alignment Details
Target: chr6 (Bit Score: 166; Significance: 2e-88; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 7 - 316
Target Start/End: Original strand, 30936975 - 30937283
Alignment:
Q  7 agtatcatctcaatcaaatgcattattacccaaattataattttagtatttgtctgtatactcactaaactatgtcaaaacccttccaaccctgttcgca 106  Q
    |||||||||||||||||||||||||| ||||||| ||||| | || ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||    
T  30936975 agtatcatctcaatcaaatgcattataacccaaactataagtctaatatttgtctatatactcactaaactatgtcaaaacgcttccaaccctgtttgca 30937074  T
Q  107 ttacccatcatccttgtaacatcttgtcatgccgatcaatagctccaacttatcaacactttgtcctcattctaattgtccaatgctagagatcaatttt 206  Q
    ||| ||| ||||||||||||||  ||| ||||| ||| ||||||||||  ||||  |||| ||||||||||||||| |||||||||||||||||||||||    
T  30937075 ttatccaccatccttgtaacatgatgttatgcctatcgatagctccaaaatatcggcactatgtcctcattctaatggtccaatgctagagatcaatttt 30937174  T
Q  207 gtggttaccctgtttgtggcctagaatgctctgaaaacaaaatcataattaatcatctaagtgacacatattatgtgacaaatataaactatgataatta 306  Q
    ||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||| || | || || | ||||||||||||||||| ||||||| ||||||    
T  30937175 gtggttaccctatttttggcctagaatgctctgaaaagaaaagcataattaatcttccatgtaac-cgtattatgtgacaaatatgaactatgctaatta 30937273  T
Q  307 ctcaatcacc 316  Q
     || ||||||    
T  30937274 ttccatcacc 30937283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 13727399 - 13727507
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  13727399 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 13727498  T
Q  979 acccccacc 987  Q
    |||||||||    
T  13727499 acccccacc 13727507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 21479600 - 21479492
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  21479600 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 21479501  T
Q  979 acccccacc 987  Q
    |||||||||    
T  21479500 acccccacc 21479492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 880 - 985
Target Start/End: Original strand, 20711720 - 20711826
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||    
T  20711720 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 20711819  T
Q  979 accccca 985  Q
    |||||||    
T  20711820 accccca 20711826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 27788688 - 27788796
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||    
T  27788688 aaagagcaattttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 27788787  T
Q  979 acccccacc 987  Q
    |||||||||    
T  27788788 acccccacc 27788796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 33774215 - 33774115
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||||    
T  33774215 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccac 33774116  T
Q  987 c 987  Q
    |    
T  33774115 c 33774115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 880 - 977
Target Start/End: Complemental strand, 21280651 - 21280554
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||    
T  21280651 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 21280554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 19737692 - 19737800
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||| ||    
T  19737692 aaagagcaatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagga 19737791  T
Q  979 acccccacc 987  Q
    |||||||||    
T  19737792 acccccacc 19737800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 24710999 - 24711107
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| ||| |||||||||| ||    
T  24710999 aaagagtgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgagga 24711098  T
Q  979 acccccacc 987  Q
    |||||||||    
T  24711099 acccccacc 24711107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 28075881 - 28075781
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  28075881 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 28075782  T
Q  987 c 987  Q
    |    
T  28075781 c 28075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 880 - 977
Target Start/End: Original strand, 1155849 - 1155946
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||| ||| |||||||||||    
T  1155849 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgag 1155946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 187 - 423
Target Start/End: Original strand, 31005652 - 31005905
Alignment:
Q  187 caatgctagagatcaattttgtggttaccctgtttgtggcctagaatgctctgaaaacaaaatcataattaatcatctaagtgacacatattatgtgaca 286  Q
    |||| |||| |||||||| |||||||| |||| || |||||| ||||||||| || |||||  |||||| | || || ||||||||||||||||||||||    
T  31005652 caatcctagtgatcaattatgtggttatcctgattttggccttgaatgctctcaagacaaagccataatcactcttccaagtgacacatattatgtgaca 31005751  T
Q  287 aatataaactatgataattactcaatcaccctag-----------------gataaaaaatgtcctagagcaagaaaaaatgttacactttcaaacctta 369  Q
    |||||| ||||||||| ||| ||||| ||||| |                 ||| |||||||||||||||||||||||||||||||||||||||| |||     
T  31005752 aatatagactatgatacttattcaattacccttgttgacatagatatattagatcaaaaatgtcctagagcaagaaaaaatgttacactttcaaatcttc 31005851  T
Q  370 ctttgtcttttcgcaaattttattcgaatgttagtttctacttcaattgtagtt 423  Q
    | ||||||||| ||  |||  ||| |||| |||||||||| |||||||||||||    
T  31005852 cattgtcttttagctcattagatttgaatcttagtttctatttcaattgtagtt 31005905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 17354052 - 17353952
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||  |||||||||| ||||||||||    
T  17354052 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccac 17353953  T
Q  987 c 987  Q
    |    
T  17353952 c 17353952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 880 - 961
Target Start/End: Complemental strand, 34397963 - 34397882
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 961  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  34397963 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatga 34397882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 880 - 960
Target Start/End: Original strand, 27314178 - 27314259
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatg 960  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||    
T  27314178 aaagagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 30832524 - 30832632
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| |||||||||| || ||||||||| ||| |||| ||||| ||    
T  30832524 aaagcgcgatgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgagga 30832623  T
Q  979 acccccacc 987  Q
    |||||||||    
T  30832624 acccccacc 30832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 892 - 984
Target Start/End: Original strand, 235236 - 235330
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgcc--gtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaaccccc 984  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||| | |||||||||||| ||||||||| ||| ||||||||||||| ||||    
T  235236 tctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccc 235330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 652 - 740
Target Start/End: Original strand, 31006040 - 31006130
Alignment:
Q  652 gtgattgt-aagagtgatgagttaaataatgttgttggtggtttgattaatggaattggttcaactatg-aaaaagggtttgtgctgaatt 740  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| |||||| |||||||| ||||| |||||||||||||||| ||||    
T  31006040 gtgattgtgaagagtgatgagttaaatgatgttgttggtggtttgataaatggatttggttcagctatgaaaaaagggtttgtgcttaatt 31006130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 6159536 - 6159465
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||| ||||    
T  6159536 atgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaat 6159465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 324 - 423
Target Start/End: Original strand, 30937403 - 30937502
Alignment:
Q  324 aaaaaatgtcctagagcaagaaaaaatgttacactttcaaaccttactttgtcttttcgcaaattttattcgaatgttagtttctacttcaattgtagtt 423  Q
    |||||||||| | || ||||||||||||||||||||||||||||| |||| |||||| |||||||| ||   ||| ||||| ||||||||||||||||||    
T  30937403 aaaaaatgtctttgaacaagaaaaaatgttacactttcaaaccttcctttatcttttagcaaatttgatctaaatcttagtatctacttcaattgtagtt 30937502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 891 - 977
Target Start/End: Original strand, 21183686 - 21183772
Alignment:
Q  891 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||| |||||||||||||||||||||| ||  |||||||||| ||||||||||||| ||||||| | ||| |||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgag 21183772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 2477592 - 2477681
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| ||| |||||||| | ||| |||||||||||    
T  2477592 atgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgag 2477681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 554 - 639
Target Start/End: Original strand, 30937688 - 30937778
Alignment:
Q  554 atacttacacttcatttttagaacctatagtaatgatgaaaaatcgaagcc-----ctatgtctttgtggctgatgatgaagcagaaattg 639  Q
    ||||||||  |||||||||||||||||||||||| ||||||||| ||||||      ||||| ||||||||||||||||||||||||||||    
T  30937688 atacttacctttcatttttagaacctatagtaattatgaaaaattgaagccttatgttatgtgtttgtggctgatgatgaagcagaaattg 30937778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 20611888 - 20611799
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||| ||| |||||||||| ||||||||||||||| ||||||||| ||  ||| |||||||||||||| | ||| |||||||||||    
T  20611888 atgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgag 20611799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 30121860 - 30121789
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||| |||||| ||||||||||| |||||||||||||| | |||||||||| |||| ||||||||||||||    
T  30121860 atgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaat 30121789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 670 - 735
Target Start/End: Original strand, 30937843 - 30937909
Alignment:
Q  670 agttaaataatgttgttggtggtttgattaatggaattggttcaactatg-aaaaagggtttgtgct 735  Q
    |||||||| ||||||||||||||||||||| | || |||||||||||||| ||||||||||||||||    
T  30937843 agttaaatgatgttgttggtggtttgattattcgatttggttcaactatgaaaaaagggtttgtgct 30937909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 903 - 953
Target Start/End: Complemental strand, 4037031 - 4036981
Alignment:
Q  903 tttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggt 953  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggt 4036981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 512 - 556
Target Start/End: Original strand, 30937618 - 30937662
Alignment:
Q  512 aagtcatcaaccttctagtgaggtgattacatctatatctatata 556  Q
    ||||||| || |||||| |||||||||||||||||||||||||||    
T  30937618 aagtcattaaacttctaatgaggtgattacatctatatctatata 30937662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 2e-42; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 54780885 - 54780777
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||    
T  54780885 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 54780786  T
Q  979 acccccacc 987  Q
    |||||||||    
T  54780785 acccccacc 54780777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 32915493 - 32915385
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||| ||    
T  32915493 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgagga 32915394  T
Q  979 acccccacc 987  Q
    |||||||||    
T  32915393 acccccacc 32915385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 34768573 - 34768681
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||    
T  34768573 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgagga 34768672  T
Q  979 acccccacc 987  Q
    |||||||||    
T  34768673 acccccacc 34768681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 38209590 - 38209698
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  38209590 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 38209689  T
Q  979 acccccacc 987  Q
    |||||||||    
T  38209690 acccccacc 38209698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 43455530 - 43455638
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||    
T  43455530 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 43455629  T
Q  979 acccccacc 987  Q
    |||||||||    
T  43455630 acccccacc 43455638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 34027679 - 34027579
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  34027679 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccac 34027580  T
Q  987 c 987  Q
    |    
T  34027579 c 34027579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 976
Target Start/End: Complemental strand, 37514767 - 37514671
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga 976  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||||||||||    
T  37514767 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 880 - 977
Target Start/End: Original strand, 35779325 - 35779421
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35779325 aaagagcaatgttctatt-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgag 35779421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 37777230 - 37777319
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  37777230 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 37777319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 2790748 - 2790848
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  2790748 atgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 2790847  T
Q  987 c 987  Q
    |    
T  2790848 c 2790848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 10979008 - 10978900
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| ||| |||||||||| ||    
T  10979008 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgagga 10978909  T
Q  979 acccccacc 987  Q
    |||||||||    
T  10978908 acccccacc 10978900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 984
Target Start/End: Complemental strand, 32128692 - 32128588
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  32128692 aaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaa 32128593  T
Q  980 ccccc 984  Q
     ||||    
T  32128592 acccc 32128588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 47129087 - 47128987
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||| ||||||||||    
T  47129087 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccac 47128988  T
Q  987 c 987  Q
    |    
T  47128987 c 47128987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 984
Target Start/End: Complemental strand, 48209348 - 48209244
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||| |||||||||||||    
T  48209348 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaa 48209249  T
Q  980 ccccc 984  Q
     ||||    
T  48209248 acccc 48209244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 881 - 977
Target Start/End: Original strand, 5128842 - 5128938
Alignment:
Q  881 aagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||| |||||||||||    
T  5128842 aagagcgatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgag 5128938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 19498610 - 19498504
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||||| |||||||||||||||| ||| |||||||||| ||    
T  19498610 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgt--atatgcggtacagccaaaggtgaaaatgactactgtatacatgagga 19498513  T
Q  979 acccccacc 987  Q
    |||||||||    
T  19498512 acccccacc 19498504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 1105640 - 1105532
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag-a 978  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||||||||| |||  |||||||||| |    
T  1105640 aaagagtgatgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagca 1105541  T
Q  979 acccccacc 987  Q
    |||||||||    
T  1105540 acccccacc 1105532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 888 - 957
Target Start/End: Original strand, 10428204 - 10428273
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaa 957  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10428204 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaa 10428273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 892 - 977
Target Start/End: Original strand, 54083253 - 54083338
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||| |||||||||||    
T  54083253 tctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgag 54083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 880 - 956
Target Start/End: Complemental strand, 17679508 - 17679432
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaa 956  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17679508 aaagagcaatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 889 - 987
Target Start/End: Complemental strand, 13460306 - 13460207
Alignment:
Q  889 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||| |||||||| | |||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 894 - 987
Target Start/End: Complemental strand, 40089609 - 40089516
Alignment:
Q  894 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||    
T  40089609 tatttatattttt-aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 40089516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 16845130 - 16845021
Alignment:
Q  880 aaagagcgatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-g 977  Q
    ||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||||||  |||||||||| ||||||||||| ||| |||||||||| |    
T  16845130 aaagagcaatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgagg 16845031  T
Q  978 aacccccacc 987  Q
    ||||||||||    
T  16845030 aacccccacc 16845021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 880 - 946
Target Start/End: Original strand, 51691914 - 51691980
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 946  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  51691914 aaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 51691980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 900 - 977
Target Start/End: Original strand, 4167910 - 4167987
Alignment:
Q  900 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgag 4167987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 880 - 960
Target Start/End: Complemental strand, 51964819 - 51964736
Alignment:
Q  880 aaagagcgatgttctatttatatttttt---aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatg 960  Q
    ||||||| ||||||||||||||||||||   |||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  51964819 aaagagcaatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 888 - 964
Target Start/End: Original strand, 39655261 - 39655337
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgatta 964  Q
    |||||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| ||||    
T  39655261 atgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatcatta 39655337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 888 - 970
Target Start/End: Original strand, 16882402 - 16882484
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtat 970  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||| ||| ||||    
T  16882402 atgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 880 - 961
Target Start/End: Original strand, 16922328 - 16922409
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 961  Q
    ||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||| |||  |||||||||||||||||    
T  16922328 aaagagcaatgttctatttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaatga 16922409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 36118465 - 36118554
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||||||  ||||||| | ||| |||||||||||    
T  36118465 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgag 36118554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 52468386 - 52468297
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||   |||| |||||||||||||| | ||| |||| ||||||    
T  52468386 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgag 52468297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 888 - 976
Target Start/End: Complemental strand, 36178772 - 36178684
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga 976  Q
    |||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||| | |||  |||||||||    
T  36178772 atgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 880 - 944
Target Start/End: Original strand, 9578663 - 9578728
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggt-gccgtatatatgcggtaca 944  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  9578663 aaagagcaatgttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 27112130 - 27112041
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| ||| |||||||| | ||| |||||||||||    
T  27112130 atgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgag 27112041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 35465206 - 35465118
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||| ||||||||||||||| |||||||||| ||||||| |||||||||||||||||| ||| |||||||| | ||| |||||||||||    
T  35465206 atgttatatttatattttttacaagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgag 35465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 891 - 953
Target Start/End: Original strand, 2135331 - 2135393
Alignment:
Q  891 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggt 953  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  2135331 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggt 2135393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 893 - 977
Target Start/End: Complemental strand, 40217327 - 40217243
Alignment:
Q  893 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||| |||| |||||| ||||||| ||||   ||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgag 40217243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 894 - 977
Target Start/End: Complemental strand, 24397028 - 24396945
Alignment:
Q  894 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||| | ||||| ||||||||||||| | ||  |||||||||||    
T  24397028 tatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgag 24396945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 959
Target Start/End: Original strand, 39329399 - 39329470
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||||| |||| ||||||||||||||||||||||||||  ||||||||| | ||||||||||| |||||||    
T  39329399 atgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaat 39329470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 37744916 - 37745006
Alignment:
Q  888 atgttctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||| |||||||||||||| |||||| || ||||||||| |||| |||||||||||||| | ||| |||||| ||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgag 37745006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 888 - 973
Target Start/End: Original strand, 10042007 - 10042092
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtataca 973  Q
    |||||||||||| |||||| |||| |||||||||||||||||||| |||| | |||||| ||| |||||||| | ||| |||||||    
T  10042007 atgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtataca 10042092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 892 - 987
Target Start/End: Complemental strand, 24969523 - 24969437
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  24969523 tctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 24969437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 880 - 929
Target Start/End: Complemental strand, 55255365 - 55255316
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccg 929  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  55255365 aaagagcaatgttccatttatattttttaaaagataaatacaaggtgccg 55255316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 896 - 959
Target Start/End: Original strand, 36362886 - 36362949
Alignment:
Q  896 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||| |||||||||||||||||||||| |||||||||||||||  |||||||||| ||| ||||    
T  36362886 tttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaat 36362949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 894 - 959
Target Start/End: Original strand, 29425187 - 29425252
Alignment:
Q  894 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||| ||||||||||| ||||||| |||||||||||||||||| |||||   ||||||||||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgcagtacatttaaaggtgaaaat 29425252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 892 - 987
Target Start/End: Original strand, 38352276 - 38352362
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||| ||| || ||||||| |||||||||||    
T  38352276 tctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacc 38352362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 883 - 934
Target Start/End: Original strand, 23508512 - 23508564
Alignment:
Q  883 gagcgatgttctatttata-ttttttaaaagataaatacaaggtgccgtatat 934  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  23508512 gagcaatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 45656275 - 45656204
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||| |||||| |||||||||||||||||| ||||||| | |||||||||| || | ||||| ||||||||    
T  45656275 atgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaat 45656204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 894 - 950
Target Start/End: Original strand, 11906904 - 11906960
Alignment:
Q  894 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaa 950  Q
    |||||| ||||||  ||||||||||||||||| ||||||||||| |||||| |||||    
T  11906904 tatttaaatttttataaagataaatacaaggtaccgtatatatgtggtacatccaaa 11906960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 889 - 977
Target Start/End: Complemental strand, 15735189 - 15735106
Alignment:
Q  889 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||| |||||||||||||||||||||||  | |||||||||     ||||| |||  ||||||| ||||| |||||||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatatat-----acaccaaaaaatgaaaatcattaccgtatacatgag 15735106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 929 - 987
Target Start/End: Original strand, 23509846 - 23509905
Alignment:
Q  929 gtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||| | |||||||||||| ||| ||| |||||| |||||||||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacc 23509905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 888 - 923
Target Start/End: Complemental strand, 24614053 - 24614018
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaag 923  Q
    |||||||||||| |||||||||||||||||||||||    
T  24614053 atgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 909 - 950
Target Start/End: Original strand, 11911158 - 11911199
Alignment:
Q  909 aaagataaatacaaggtgccgtatatatgcggtacacccaaa 950  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  11911158 aaagataaatacaaggtaccgtatatatgtggtacatccaaa 11911199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 888 - 921
Target Start/End: Original strand, 30507129 - 30507162
Alignment:
Q  888 atgttctatttatattttttaaaagataaataca 921  Q
    |||||||||||| |||||||||||||||||||||    
T  30507129 atgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 5e-40; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 45475920 - 45475812
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  45475920 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagga 45475821  T
Q  979 acccccacc 987  Q
    |||||||||    
T  45475820 acccccacc 45475812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 880 - 985
Target Start/End: Original strand, 5860744 - 5860849
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||    
T  5860744 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaa 5860843  T
Q  980 ccccca 985  Q
     |||||    
T  5860844 acccca 5860849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 23606629 - 23606737
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||    
T  23606629 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgagga 23606728  T
Q  979 acccccacc 987  Q
    |||||||||    
T  23606729 acccccacc 23606737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 23798261 - 23798369
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||| ||    
T  23798261 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgagga 23798360  T
Q  979 acccccacc 987  Q
    |||||||||    
T  23798361 acccccacc 23798369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 30883432 - 30883324
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  30883432 aaagagcaatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 30883333  T
Q  979 acccccacc 987  Q
    |||||||||    
T  30883332 acccccacc 30883324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 2952221 - 2952329
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| ||| |||||||||| ||    
T  2952221 aaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 2952320  T
Q  979 acccccacc 987  Q
    |||||||||    
T  2952321 acccccacc 2952329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 13534687 - 13534794
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  13534687 aaagagcaatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 13534785  T
Q  979 acccccacc 987  Q
    |||||||||    
T  13534786 acccccacc 13534794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 13624227 - 13624334
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  13624227 aaagagcaatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 13624325  T
Q  979 acccccacc 987  Q
    |||||||||    
T  13624326 acccccacc 13624334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 880 - 977
Target Start/End: Original strand, 37430158 - 37430255
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||| ||| |||||||||||    
T  37430158 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgag 37430255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 892 - 987
Target Start/End: Complemental strand, 10917482 - 10917386
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||  ||||||||| |||||||||||    
T  10917482 tctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacc 10917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 888 - 984
Target Start/End: Complemental strand, 41879276 - 41879180
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaaccccc 984  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| | ||||||||||| ||||    
T  41879276 atgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccc 41879180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 892 - 987
Target Start/End: Complemental strand, 42600873 - 42600777
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  42600873 tctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 42600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 8103007 - 8102918
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  8103007 atgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgag 8102918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 880 - 973
Target Start/End: Original strand, 3048517 - 3048610
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtataca 973  Q
    ||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||| ||| |||||||    
T  3048517 aaagagcaatatactatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtataca 3048610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 7944530 - 7944619
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| | ||| |||||||||||    
T  7944530 atgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 7944619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 880 - 979
Target Start/End: Original strand, 34789862 - 34789961
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||| |||||||||||||| || | |||||||||||||||||| || ||||||||||  |||||||||||||||||||| | ||| |||||||||||||    
T  34789862 aaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagaa 34789961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 888 - 973
Target Start/End: Original strand, 5973115 - 5973200
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtataca 973  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||  ||||||||| || ||||||| ||||| |||||||    
T  5973115 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtataca 5973200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 11290279 - 11290190
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||| |||||| |||||||||||||||||||||||||| ||||||||||  |||||| ||||||||||||| | ||| |||||||||||    
T  11290279 atgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgag 11290190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 902 - 977
Target Start/End: Complemental strand, 5942777 - 5942702
Alignment:
Q  902 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| | ||| |||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgag 5942702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 5721654 - 5721565
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||| | ||| |||||| ||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgag 5721565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 39332413 - 39332502
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||  ||||| ||||||||||||||||||| | |||||| |||||||| |||||||||||||| | ||| |||||||||||    
T  39332413 atgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgag 39332502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 888 - 959
Target Start/End: Original strand, 30674411 - 30674482
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| || |||||||||||||||| |||||| |||||||||||| ||||| |||||||||||||    
T  30674411 atgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaat 30674482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 41677181 - 41677271
Alignment:
Q  888 atgttctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||| |||||||||||||||||| || |||||||||||| |||| | |||||||||||| | ||| |||||||||||    
T  41677181 atgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 15078853 - 15078764
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| | ||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||| | ||  |||||||||||    
T  15078853 atgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgag 15078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 15167423 - 15167512
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||||||||||||||| || |||  ||||||||||| |||||||||| |||||||| | ||  |||||||||||    
T  15167423 atgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgag 15167512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 979
Target Start/End: Complemental strand, 8646300 - 8646210
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||||  ||||| |||| |||||||| | ||| |||||||| ||||    
T  8646300 atgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc-atacacgcaaatgtgaaaatcactaccgtatacataagaa 8646210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 959
Target Start/End: Original strand, 23941099 - 23941170
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||| |||||| |||||||||||||||||||||||||| | |||||| ||| ||||||||||| |||||||    
T  23941099 atgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaat 23941170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 25561503 - 25561590
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| || ||||||| |||||||||||||||||||||||||||| || ||||||| |||||||| | | | |||||||||||    
T  25561503 atgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgag 25561590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 888 - 958
Target Start/End: Original strand, 14509991 - 14510059
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaa 958  Q
    |||||| ||||| ||||||||||||| ||||| |||||| ||||||||  ||||||||||||| |||||||    
T  14509991 atgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaa 14510059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 888 - 926
Target Start/End: Original strand, 34868185 - 34868223
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtg 926  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  34868185 atgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 888 - 925
Target Start/End: Complemental strand, 9108588 - 9108551
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggt 925  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9108588 atgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 910 - 946
Target Start/End: Complemental strand, 5757153 - 5757117
Alignment:
Q  910 aagataaatacaaggtgccgtatatatgcggtacacc 946  Q
    ||||||||||||||||||||||||||||||| |||||    
T  5757153 aagataaatacaaggtgccgtatatatgcggaacacc 5757117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 34048713 - 34048804
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgc--ggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |  ||||||||||||||||||| ||| |||||||||    | ||||||||||| ||||||| | ||| |||||||||||    
T  34048713 atgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgag 34048804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 5e-40; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 27079114 - 27079006
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||    
T  27079114 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgagga 27079015  T
Q  979 acccccacc 987  Q
    |||||||||    
T  27079014 acccccacc 27079006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 28822339 - 28822447
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||    
T  28822339 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatga 28822438  T
Q  979 acccccacc 987  Q
    |||||||||    
T  28822439 acccccacc 28822447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 34756363 - 34756471
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  34756363 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 34756462  T
Q  979 acccccacc 987  Q
    |||||||||    
T  34756463 acccccacc 34756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 880 - 979
Target Start/End: Original strand, 36187876 - 36187975
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  36187876 aaagagcgatgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaa 36187975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 9364386 - 9364286
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  9364386 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 9364287  T
Q  987 c 987  Q
    |    
T  9364286 c 9364286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 19523302 - 19523194
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||||| ||    
T  19523302 aaagagcggtgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagga 19523203  T
Q  979 acccccacc 987  Q
    |||||||||    
T  19523202 acccccacc 19523194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 984
Target Start/End: Original strand, 38869360 - 38869464
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  38869360 aaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaa 38869459  T
Q  980 ccccc 984  Q
     ||||    
T  38869460 acccc 38869464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 888 - 986
Target Start/End: Original strand, 16799332 - 16799431
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  16799332 atgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccac 16799431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 30854432 - 30854324
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||  |||||||||| ||    
T  30854432 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgagga 30854333  T
Q  979 acccccacc 987  Q
    |||||||||    
T  30854332 acccccacc 30854324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 2274993 - 2274885
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||||||||| ||| ||||||| || ||    
T  2274993 aaagagcgatgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgagga 2274894  T
Q  979 acccccacc 987  Q
    |||||||||    
T  2274893 acccccacc 2274885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 15480086 - 15480194
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| ||| |||| ||||| ||    
T  15480086 aaagaccgatgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgagga 15480185  T
Q  979 acccccacc 987  Q
    |||||||||    
T  15480186 acccccacc 15480194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 16198799 - 16198899
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  16198799 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 16198898  T
Q  987 c 987  Q
    |    
T  16198899 c 16198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 880 - 961
Target Start/End: Complemental strand, 7338102 - 7338021
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 961  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 880 - 977
Target Start/End: Original strand, 31194609 - 31194705
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| | ||| |||||||||||    
T  31194609 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgag 31194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 16592071 - 16592179
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||| ||| ||||| |||| ||    
T  16592071 aaagagcaatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgagga 16592170  T
Q  979 acccccacc 987  Q
    |||||||||    
T  16592171 acccccacc 16592179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 880 - 979
Target Start/End: Original strand, 22986555 - 22986654
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||||| |||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  22986555 aaagagcaatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaa 22986654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 880 - 977
Target Start/End: Original strand, 23284059 - 23284156
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| |||||||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  23284059 aaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgag 23284156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 893 - 977
Target Start/End: Complemental strand, 27924172 - 27924088
Alignment:
Q  893 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgag 27924088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 40389541 - 40389641
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||| ||||  |||| ||||||||||    
T  40389541 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaacccccac 40389640  T
Q  987 c 987  Q
    |    
T  40389641 c 40389641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 7671020 - 7670930
Alignment:
Q  888 atgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| | |||||||||||||||||||||||| ||| |||||||||||    
T  7671020 atgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgag 7670930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 880 - 977
Target Start/End: Original strand, 31881431 - 31881527
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| || ||||||| | ||| |||||||||||    
T  31881431 aaagagcaatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgag 31881527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 36868881 - 36868970
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| | ||| |||||||||||    
T  36868881 atgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgag 36868970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 2530902 - 2530991
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||  ||||||||||||||||||||| ||| ||||||||| ||||||| |||||||||||||| | ||| |||||||||||    
T  2530902 atgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgag 2530991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 34425998 - 34425909
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||| | |||||| |||| | ||||| ||||| |||||||||||    
T  34425998 atgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgag 34425909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 2024647 - 2024736
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||| | |||  ||||||||||    
T  2024647 atgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgag 2024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 14318390 - 14318479
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||| | |||| |||||  ||||||| | ||| |||||||||||    
T  14318390 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgag 14318479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 26718954 - 26719043
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| | |||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||| | ||| | |||||||||    
T  26718954 atgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 26988698 - 26988787
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| | |||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||| | ||| | |||||||||    
T  26988698 atgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 33037875 - 33037786
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||| |||||| ||||||||||||||||||||||| |  ||||||||||  |||||||||||||||||||  ||||| |||||||||||    
T  33037875 atgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgag 33037786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 2412183 - 2412094
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||||||| |||||||||| ||| |||||||||||| | || ||||| |||||||| | ||| |||||||||||    
T  2412183 atgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgag 2412094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 955
Target Start/End: Original strand, 22648741 - 22648808
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtga 955  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||||| || ||| ||||||||||    
T  22648741 atgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtga 22648808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 24395834 - 24395763
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||| |  |||| ||||||||||||||    
T  24395834 atgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaat 24395763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 888 - 974
Target Start/End: Complemental strand, 10543768 - 10543682
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacat 974  Q
    |||||| | ||| ||||||||||||||||||| ||||||  ||||||||||| |||| |||||||||||||| | ||| ||||||||    
T  10543768 atgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 1366531 - 1366620
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||| |||||||||||||| ||  ||||||||||| |||||| ||| |||||||| | ||| ||||| |||||    
T  1366531 atgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgag 1366620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 888 - 979
Target Start/End: Original strand, 40794332 - 40794423
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||| |||||| ||||||||||||| |||||||| | |||||| ||||  | |||||| |||||||||||| | ||| |||||||||||||    
T  40794332 atgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaa 40794423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 10407556 - 10407467
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||||||||||||| |||||||| |||| |||||  ||||| | ||| |||||||| | ||| |||| ||||||    
T  10407556 atgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgag 10407467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 902 - 959
Target Start/End: Complemental strand, 15639724 - 15639667
Alignment:
Q  902 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||| |||||||||||||||||| |||||||||||| |||| |||||| |||||||    
T  15639724 tttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaat 15639667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 902 - 959
Target Start/End: Original strand, 41911636 - 41911693
Alignment:
Q  902 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||| || |||||    
T  41911636 ttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaat 41911693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 888 - 926
Target Start/End: Complemental strand, 606249 - 606211
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtg 926  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  606249 atgttctatttaaattttttaaaagataaatacaaggtg 606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 11242323 - 11242412
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||  |||||||||||||||||||||  ||  ||||||||| | |||| |||||| || |||| | ||| |||||||||||    
T  11242323 atgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgag 11242412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 888 - 951
Target Start/End: Complemental strand, 17345051 - 17344988
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaag 951  Q
    |||||||||||| |||||||| |  ||||||||||| || | | ||||||||||||||||||||    
T  17345051 atgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaag 17344988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 5e-40; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 47467790 - 47467682
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||||| ||    
T  47467790 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgagga 47467691  T
Q  979 acccccacc 987  Q
    |||||||||    
T  47467690 acccccacc 47467682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 54619203 - 54619311
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  54619203 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 54619302  T
Q  979 acccccacc 987  Q
    |||||||||    
T  54619303 acccccacc 54619311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 880 - 977
Target Start/End: Complemental strand, 42098907 - 42098810
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||| ||| |||||||||||    
T  42098907 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgag 42098810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 3953904 - 3954004
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || |||||||||| ||||||||||    
T  3953904 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccac 3954003  T
Q  987 c 987  Q
    |    
T  3954004 c 3954004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 21582869 - 21582769
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||||||||    
T  21582869 atgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccac 21582770  T
Q  987 c 987  Q
    |    
T  21582769 c 21582769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 34290644 - 34290744
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||||||    
T  34290644 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccac 34290743  T
Q  987 c 987  Q
    |    
T  34290744 c 34290744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 44708575 - 44708475
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  44708575 atgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 44708476  T
Q  987 c 987  Q
    |    
T  44708475 c 44708475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 53149314 - 53149422
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || | ||||||| ||| |||||||||| ||    
T  53149314 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgagga 53149413  T
Q  979 acccccacc 987  Q
    |||||||||    
T  53149414 acccccacc 53149422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 984
Target Start/End: Original strand, 53506892 - 53506988
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaaccccc 984  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  53506892 atgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccc 53506988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 888 - 986
Target Start/End: Original strand, 8073346 - 8073444
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaacccccac 986  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||||||| | ||||||    
T  8073346 atgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaaccccac 8073444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 880 - 977
Target Start/End: Original strand, 38681093 - 38681190
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||| |||||||||||    
T  38681093 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgag 38681190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 888 - 984
Target Start/End: Original strand, 27078577 - 27078673
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaaccccc 984  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||| ||||    
T  27078577 atgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27078673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 888 - 984
Target Start/End: Original strand, 27084374 - 27084470
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaaccccc 984  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||| ||||    
T  27084374 atgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27084470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 43207238 - 43207345
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||| |||||||||| ||    
T  43207238 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgagga 43207336  T
Q  979 acccccacc 987  Q
    |||||||||    
T  43207337 acccccacc 43207345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 54407166 - 54407265
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaacccccacc 987  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| ||||||||   ||||||||||    
T  54407166 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatagtaacccccacc 54407265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 880 - 958
Target Start/End: Original strand, 36716025 - 36716103
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaa 958  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36716025 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaa 36716103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 37168465 - 37168376
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||||    
T  37168465 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgag 37168376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 880 - 974
Target Start/End: Original strand, 9878687 - 9878781
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacat 974  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||  ||||||||    
T  9878687 aaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacat 9878781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 892 - 977
Target Start/End: Original strand, 50939245 - 50939330
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||||| ||| |||||||||||    
T  50939245 tctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgag 50939330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 880 - 977
Target Start/End: Complemental strand, 18372589 - 18372488
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatat----gcggtacacccaaaggtgaaaatgattacggtatacatg 975  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    ||||||||| || |||||||||||| ||| |||||||||    
T  18372589 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatg 18372490  T
Q  976 ag 977  Q
    ||    
T  18372489 ag 18372488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 882 - 977
Target Start/End: Complemental strand, 36606069 - 36605974
Alignment:
Q  882 agagcgatgttctatttatattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||| | ||| |||||||||||    
T  36606069 agagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgag 36605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 880 - 986
Target Start/End: Original strand, 50258623 - 50258731
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc-aaaggtgaaaatgattacggtatacatga-g 977  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||  | ||||||||||| ||  |||| ||||| |    
T  50258623 aaagagcgatgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgagg 50258722  T
Q  978 aacccccac 986  Q
    |||||||||    
T  50258723 aacccccac 50258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 8420424 - 8420353
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  8420424 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaat 8420353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 888 - 959
Target Start/End: Original strand, 32319163 - 32319234
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  32319163 atgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaat 32319234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 888 - 979
Target Start/End: Original strand, 28689369 - 28689460
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||| || | |||||||||||||| | | | |||||||||||||    
T  28689369 atgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaa 28689460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 981
Target Start/End: Complemental strand, 49393187 - 49393095
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaacc 981  Q
    ||||||| |||| |||||||||||||||||||||||| | ||||||||||  |||||||||||||| ||||| | ||| |||||||||||||||    
T  49393187 atgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgagaacc 49393095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 54574835 - 54574924
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||| |||| ||||||||||||| |||||||||||||||||||||||| || ||||| | |||  ||||||||||    
T  54574835 atgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgag 54574924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 26279640 - 26279569
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||  ||||||||||| |||||||    
T  26279640 atgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaat 26279569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 891 - 944
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  891 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 944  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 915 - 987
Target Start/End: Original strand, 29620423 - 29620496
Alignment:
Q  915 aaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||| ||| |||||||||| |||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacc 29620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 955
Target Start/End: Complemental strand, 42453502 - 42453435
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtga 955  Q
    |||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| ||||||||    
T  42453502 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 42453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 888 - 973
Target Start/End: Complemental strand, 25855519 - 25855435
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtataca 973  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||||  || ||||||||| ||||||| | ||| |||||||    
T  25855519 atgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtataca 25855435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 892 - 986
Target Start/End: Complemental strand, 48157223 - 48157138
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  48157223 tctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccac 48157138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 891 - 959
Target Start/End: Complemental strand, 790031 - 789963
Alignment:
Q  891 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||||||| ||||||||||  |||||||||||||| | ||||||||  |||||||||||||| |||||    
T  790031 ttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaat 789963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 5e-40; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 5316794 - 5316686
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  5316794 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 5316695  T
Q  979 acccccacc 987  Q
    |||||||||    
T  5316694 acccccacc 5316686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 14146414 - 14146306
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||| ||    
T  14146414 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 14146315  T
Q  979 acccccacc 987  Q
    |||||||||    
T  14146314 acccccacc 14146306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 23185541 - 23185433
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  23185541 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagga 23185442  T
Q  979 acccccacc 987  Q
    |||||||||    
T  23185441 acccccacc 23185433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 880 - 973
Target Start/End: Complemental strand, 6771905 - 6771812
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtataca 973  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  6771905 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtataca 6771812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 3406532 - 3406424
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |  |||||||||||| ||| |||||||||| ||    
T  3406532 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagga 3406433  T
Q  979 acccccacc 987  Q
    |||||||||    
T  3406432 acccccacc 3406424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 3440288 - 3440396
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |  |||||||||||| ||| |||||||||| ||    
T  3440288 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagga 3440387  T
Q  979 acccccacc 987  Q
    |||||||||    
T  3440388 acccccacc 3440396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 4971617 - 4971725
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||| ||| |||||||||| ||    
T  4971617 aaagagcaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgagga 4971716  T
Q  979 acccccacc 987  Q
    |||||||||    
T  4971717 acccccacc 4971725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 5027663 - 5027555
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  |||| |||| ||    
T  5027663 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgagga 5027564  T
Q  979 acccccacc 987  Q
    |||||||||    
T  5027563 acccccacc 5027555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 9173030 - 9173130
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||    
T  9173030 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccac 9173129  T
Q  987 c 987  Q
    |    
T  9173130 c 9173130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 9181012 - 9181112
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||    
T  9181012 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccac 9181111  T
Q  987 c 987  Q
    |    
T  9181112 c 9181112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 27559743 - 27559643
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  27559743 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 27559644  T
Q  987 c 987  Q
    |    
T  27559643 c 27559643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 44655855 - 44655747
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||| |||||||||| ||    
T  44655855 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 44655756  T
Q  979 acccccacc 987  Q
    |||||||||    
T  44655755 acccccacc 44655747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 881 - 987
Target Start/End: Original strand, 1366878 - 1366985
Alignment:
Q  881 aagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaa 979  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| || |||    
T  1366878 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaa 1366977  T
Q  980 cccccacc 987  Q
    ||||||||    
T  1366978 cccccacc 1366985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 880 - 977
Target Start/End: Complemental strand, 16140169 - 16140072
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||||| ||| |||||||||||    
T  16140169 aaagagtgatgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgag 16140072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 880 - 977
Target Start/End: Complemental strand, 50881544 - 50881447
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | |||||||||||| ||| |||||||||||    
T  50881544 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgag 50881447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 892 - 987
Target Start/End: Complemental strand, 19955819 - 19955723
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  19955819 tctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacc 19955723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 17169062 - 17168973
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  17169062 atgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgag 17168973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 880 - 961
Target Start/End: Original strand, 21740936 - 21741017
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 961  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  21740936 aaagagcaatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatga 21741017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 892 - 976
Target Start/End: Original strand, 40501801 - 40501885
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga 976  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  40501801 tctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatga 40501885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 41697136 - 41697244
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||| ||| | |||||||||| ||| |||||||||| ||    
T  41697136 aaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgagga 41697235  T
Q  979 acccccacc 987  Q
    |||||||||    
T  41697236 acccccacc 41697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 51607446 - 51607536
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtg-ccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||    
T  51607446 atgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgag 51607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 880 - 963
Target Start/End: Complemental strand, 6889725 - 6889642
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgatt 963  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||| ||||||||||||||    
T  6889725 aaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgatt 6889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 880 - 963
Target Start/End: Complemental strand, 6891571 - 6891488
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgatt 963  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||| ||||||||||||||    
T  6891571 aaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgatt 6891488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 888 - 959
Target Start/End: Original strand, 38547043 - 38547114
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  38547043 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaat 38547114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 892 - 984
Target Start/End: Original strand, 13913491 - 13913585
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaaccccc 984  Q
    |||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||| ||| |||||||||| ||| ||||||||||||| ||||    
T  13913491 tctatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccc 13913585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 880 - 959
Target Start/End: Original strand, 22865460 - 22865538
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||    
T  22865460 aaagagcaatgttctatttatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 889 - 981
Target Start/End: Complemental strand, 38853627 - 38853535
Alignment:
Q  889 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaacc 981  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||||||  ||| | |||||||||||||| | ||| |||||||||||||||    
T  38853627 tgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgagaacc 38853535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 39134729 - 39134819
Alignment:
Q  888 atgttctatttatattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| ||| | ||| |||||||||||    
T  39134729 atgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 892 - 987
Target Start/End: Complemental strand, 44895748 - 44895658
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||| |||||| ||  |      ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  44895748 tctatttatattttttaaaagataaatataaggtggcgggt------ggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacc 44895658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 45758600 - 45758511
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||||||||||||| |||||||  |||||||||   |||| |||||||||||||| | ||| |||||||||||    
T  45758600 atgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgag 45758511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 902 - 977
Target Start/End: Complemental strand, 5533404 - 5533329
Alignment:
Q  902 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||| |||||||||||||||||||  |||||  ||||||||||||| | ||| |||||||||||    
T  5533404 ttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 894 - 979
Target Start/End: Complemental strand, 26804045 - 26803963
Alignment:
Q  894 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    |||||| ||||||||||||||||||||||| || |||||||||||| |||||   ||||||||||| | ||| |||||||||||||    
T  26804045 tatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 979
Target Start/End: Complemental strand, 33170865 - 33170774
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||| |||||| |||||||||||  ||||||||| |||  |||||||||||||||||| || ||||||||| | ||| |||||||||||||    
T  33170865 atgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaa 33170774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 35392375 - 35392305
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||| |||||| |||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  35392375 atgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaat 35392305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 6221783 - 6221695
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||| |||||||| | ||| |||||||| ||||  ||||| |||||    
T  6221783 atgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgag 6221695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 880 - 929
Target Start/End: Original strand, 27906728 - 27906777
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccg 929  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  27906728 aaagagcaatgttccatttatattttttaaaagataaatacaaggtgccg 27906777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 50146402 - 50146313
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| | ||||| |||||||||| ||||||||||| |||||| | || |||||||||| ||||| |||||  ||||||||||    
T  50146402 atgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgag 50146313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 43235775 - 43235866
Alignment:
Q  888 atgttctatttatatttttta--aaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||   ||||||||||||||| || ||||||||||  |||||||||||||||||||| | ||  |||||||||||    
T  43235775 atgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgag 43235866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 888 - 942
Target Start/End: Original strand, 17322630 - 17322684
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggta 942  Q
    |||||||||||||||||||| |||||||||||||| ||  |||||||||||||||    
T  17322630 atgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcggta 17322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 903 - 977
Target Start/End: Original strand, 10925976 - 10926050
Alignment:
Q  903 tttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||| |||||||||| |||||||||||||| | | || |||||| ||||||| | ||| |||||||||||    
T  10925976 tttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgag 10926050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 8171538 - 8171646
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||| ||    
T  8171538 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 8171637  T
Q  979 acccccacc 987  Q
    |||||||||    
T  8171638 acccccacc 8171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 10955587 - 10955479
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| ||| |||||||||| ||    
T  10955587 aaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagga 10955488  T
Q  979 acccccacc 987  Q
    |||||||||    
T  10955487 acccccacc 10955479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 984
Target Start/End: Original strand, 18776765 - 18776869
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||| |||||||||||||    
T  18776765 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaa 18776864  T
Q  980 ccccc 984  Q
     ||||    
T  18776865 acccc 18776869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 12596286 - 12596394
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||| ||||| ||    
T  12596286 aaagagcgatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgagga 12596385  T
Q  979 acccccacc 987  Q
    |||||||||    
T  12596386 acccccacc 12596394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 892 - 987
Target Start/End: Original strand, 20091292 - 20091388
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  20091292 tctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 20091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 29077323 - 29077215
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||| |||||||||| ||    
T  29077323 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgagga 29077224  T
Q  979 acccccacc 987  Q
    |||||||||    
T  29077223 acccccacc 29077215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 880 - 961
Target Start/End: Complemental strand, 26254096 - 26254015
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 961  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26254096 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaatga 26254015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 24525692 - 24525792
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||||    
T  24525692 atgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccac 24525791  T
Q  987 c 987  Q
    |    
T  24525792 c 24525792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 888 - 984
Target Start/End: Original strand, 10329417 - 10329513
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaaccccc 984  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| || | |||||||||||||||||| ||| ||||||||||||| ||||    
T  10329417 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccc 10329513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 880 - 960
Target Start/End: Original strand, 33162338 - 33162418
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatg 960  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 38414875 - 38414983
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| | ||||||||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||| |||||||||| ||    
T  38414875 aaagagcaacgttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgagga 38414974  T
Q  979 acccccacc 987  Q
    |||||||||    
T  38414975 acccccacc 38414983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 892 - 987
Target Start/End: Original strand, 48983855 - 48983951
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | ||| |||||||||| |||||||||||    
T  48983855 tctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacc 48983951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 880 - 977
Target Start/End: Complemental strand, 19692197 - 19692100
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |   |||||||||||    
T  19692197 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgag 19692100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 888 - 987
Target Start/End: Original strand, 47984976 - 47985077
Alignment:
Q  888 atgttctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaaccccca 985  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||    
T  47984976 atgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaaccccca 47985075  T
Q  986 cc 987  Q
    ||    
T  47985076 cc 47985077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 893 - 977
Target Start/End: Original strand, 9021812 - 9021896
Alignment:
Q  893 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  9021812 ctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgag 9021896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 8239782 - 8239693
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||| |||||||||||| |||||||||||||| ||||| |||||    
T  8239782 atgttctatttatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgag 8239693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 892 - 987
Target Start/End: Original strand, 23551081 - 23551178
Alignment:
Q  892 tctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||    
T  23551081 tctatttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 23551178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 2611269 - 2611358
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||| |  || |||||||||||    
T  2611269 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgag 2611358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 23859168 - 23859079
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||| ||||||| | ||| |||||||||||    
T  23859168 atgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgag 23859079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 880 - 977
Target Start/End: Complemental strand, 28749812 - 28749716
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | |||||||| | ||| |||||||||||    
T  28749812 aaagagcaatattctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgag 28749716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 888 - 959
Target Start/End: Original strand, 6765688 - 6765759
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| ||||||||||||||    
T  6765688 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaat 6765759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 7398546 - 7398457
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||| | |||||| |||||||||||| | |||  ||||||||||    
T  7398546 atgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgag 7398457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 12981421 - 12981332
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||  |||||||||||||||||||||||| || |||||| ||||||||| ||||||||||||| | ||| ||||| |||||    
T  12981421 atgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgag 12981332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 36891673 - 36891584
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||||||||||||| ||| ||||||| |||  |||||||| ||||||| |||||||||||||| | ||| |||||||||||    
T  36891673 atgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgag 36891584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 36902931 - 36903020
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||||| ||||||||||||| || ||||||||||  ||||||| |||||||||||| | ||| |||||||||||    
T  36902931 atgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgag 36903020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 888 - 951
Target Start/End: Complemental strand, 23744891 - 23744828
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaag 951  Q
    |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  23744891 atgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaag 23744828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 889 - 959
Target Start/End: Original strand, 21763595 - 21763665
Alignment:
Q  889 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||||||||| |||||||||||||||||||||| ||  |||||||||||| |||||| ||| ||||||||    
T  21763595 tgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaat 21763665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 20153296 - 20153207
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||| |||||| |||||||||||||||||||||| |||  ||||||||||| || |||||||| ||||||| | | | |||||||||||    
T  20153296 atgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgag 20153207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 892 - 959
Target Start/End: Complemental strand, 18201228 - 18201161
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||| ||||||||||| ||||||||||| |||| |||||||| |||||||| || |||||||||    
T  18201228 tctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaat 18201161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 888 - 937
Target Start/End: Original strand, 27237430 - 27237479
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 937  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  27237430 atgttctatttaaattttttaaaagataaatacaaggtgttgtatatatg 27237479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 888 - 959
Target Start/End: Original strand, 12419502 - 12419573
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| |||||||||||||||||||||| || || ||||| || | |||| |||||| |||||||    
T  12419502 atgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaat 12419573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 937 - 987
Target Start/End: Complemental strand, 25010479 - 25010428
Alignment:
Q  937 gcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccacc 987  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  25010479 gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 25010428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 895 - 977
Target Start/End: Original strand, 23020498 - 23020579
Alignment:
Q  895 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||| ||||||||||||||||||| ||||||  ||||||||||   |||| ||||||||||||| | ||| |||||||||||    
T  23020498 atttagattttttaaaagataaatataaggtgttgtatatatgc-acacactcaaaggtgaaaatcactaccgtatacatgag 23020579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 903 - 959
Target Start/End: Complemental strand, 38971333 - 38971277
Alignment:
Q  903 tttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||||||||||||||| ||||||||||   |||||| ||| ||||||||    
T  38971333 tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaat 38971277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 1e-37; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 3155319 - 3155211
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||| ||    
T  3155319 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagga 3155220  T
Q  979 acccccacc 987  Q
    |||||||||    
T  3155219 acccccacc 3155211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 3953108 - 3953000
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||| ||    
T  3953108 aaagaccgatgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgagga 3953009  T
Q  979 acccccacc 987  Q
    |||||||||    
T  3953008 acccccacc 3953000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 4505996 - 4505888
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||| ||    
T  4505996 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 4505897  T
Q  979 acccccacc 987  Q
    |||||||||    
T  4505896 acccccacc 4505888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 6965109 - 6965001
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||    
T  6965109 aaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 6965010  T
Q  979 acccccacc 987  Q
    |||||||||    
T  6965009 acccccacc 6965001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 24410531 - 24410442
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  24410531 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 24410442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 880 - 977
Target Start/End: Original strand, 29939862 - 29939959
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  29939862 aaagagcaatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 29939959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 10762565 - 10762673
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||    
T  10762565 aaagagcaatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgagga 10762664  T
Q  979 acccccacc 987  Q
    |||||||||    
T  10762665 acccccacc 10762673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 880 - 977
Target Start/End: Complemental strand, 7162886 - 7162789
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||| ||| ||||| |||||    
T  7162886 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgag 7162789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 9046124 - 9046023
Alignment:
Q  888 atgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaaccccca 985  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  9046124 atgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccca 9046025  T
Q  986 cc 987  Q
    ||    
T  9046024 cc 9046023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 26716231 - 26716122
Alignment:
Q  880 aaagagcgatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-g 977  Q
    ||||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| |    
T  26716231 aaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 26716132  T
Q  978 aacccccacc 987  Q
    ||||||||||    
T  26716131 aacccccacc 26716122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 888 - 984
Target Start/End: Original strand, 8907087 - 8907183
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaaccccc 984  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||| ||||    
T  8907087 atgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccc 8907183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 880 - 987
Target Start/End: Original strand, 12337448 - 12337556
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||||||| ||| |||||||||| ||    
T  12337448 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgagga 12337547  T
Q  979 acccccacc 987  Q
    |||||||||    
T  12337548 acccccacc 12337556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 892 - 977
Target Start/End: Original strand, 27506752 - 27506837
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||    
T  27506752 tctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgag 27506837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 880 - 961
Target Start/End: Complemental strand, 34694077 - 34693996
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 961  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  34694077 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatga 34693996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 880 - 961
Target Start/End: Complemental strand, 34716489 - 34716408
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 961  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  34716489 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatga 34716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 880 - 956
Target Start/End: Complemental strand, 40636240 - 40636164
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaa 956  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  40636240 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 16097102 - 16097013
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | |||  ||||||||||    
T  16097102 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgag 16097013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 24035553 - 24035642
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| | ||| | |||||||||    
T  24035553 atgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgag 24035642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 880 - 956
Target Start/End: Original strand, 5952717 - 5952791
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaa 956  Q
    ||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5952717 aaagagcaatgttatatttat--tttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 38400892 - 38400803
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||  ||||||||||||| | ||| |||||||||||    
T  38400892 atgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgag 38400803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 888 - 959
Target Start/End: Original strand, 13800552 - 13800624
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc-aaaggtgaaaat 959  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  13800552 atgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaat 13800624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 888 - 959
Target Start/End: Original strand, 28425718 - 28425789
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| |  ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  28425718 atgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaat 28425789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 888 - 974
Target Start/End: Original strand, 12134048 - 12134134
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacat 974  Q
    |||||||||||| |   ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| | ||| ||||||||    
T  12134048 atgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacat 12134134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 21665708 - 21665797
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||||||||||||||||| |||| |||||||||| | |||| | ||| |||||||| | ||| |||||||||||    
T  21665708 atgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgag 21665797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 888 - 958
Target Start/End: Original strand, 7742141 - 7742212
Alignment:
Q  888 atgttctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaa 958  Q
    |||||||||||||||||| ||||||||||||||||| ||| | |||||||||| |||| |||||||||||||    
T  7742141 atgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaa 7742212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 891 - 959
Target Start/End: Original strand, 16227379 - 16227447
Alignment:
Q  891 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| | |||||| | || |||||||    
T  16227379 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaat 16227447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 42029239 - 42029168
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    |||||||||||| ||||||||||||||||||| |||||| | |||| |||  ||||||| ||||||||||||    
T  42029239 atgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaat 42029168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 908 - 982
Target Start/End: Original strand, 22727530 - 22727604
Alignment:
Q  908 aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaaccc 982  Q
    ||||||||||||| | ||| ||||||||||||||||||||||| |||||||| | |||  ||||||||| |||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatgataaccc 22727604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 913 - 977
Target Start/End: Complemental strand, 37182739 - 37182675
Alignment:
Q  913 ataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||||| |||||||||||  |||||||||| |||||||| | ||| |||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgag 37182675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 888 - 974
Target Start/End: Original strand, 11912765 - 11912851
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacat 974  Q
    |||||||||||| ||||   |||| |||||||||| |||||||||||||||  |||| |||||| ||||||| | ||| ||||||||    
T  11912765 atgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacat 11912851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 888 - 958
Target Start/End: Complemental strand, 10252510 - 10252437
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgt---atatatgcggtacacccaaaggtgaaaa 958  Q
    |||||| ||||| |||||||||||||||||||||||||| |||   |||||| |   |||||||||||||||||    
T  10252510 atgttcaatttaaattttttaaaagataaatacaaggtgtcgtcgtatatatactacacacccaaaggtgaaaa 10252437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 892 - 926
Target Start/End: Complemental strand, 8327708 - 8327674
Alignment:
Q  892 tctatttatattttttaaaagataaatacaaggtg 926  Q
    |||||||||||||||||||||||||||| ||||||    
T  8327708 tctatttatattttttaaaagataaatataaggtg 8327674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 888 - 987
Target Start/End: Complemental strand, 106633 - 106533
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaacccccac 986  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  106633 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 106534  T
Q  987 c 987  Q
    |    
T  106533 c 106533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 73; Significance: 8e-33; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 880 - 987
Target Start/End: Complemental strand, 1446 - 1338
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga-ga 978  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||| ||| |||||||||| ||    
T  1446 aaagagcactgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 1347  T
Q  979 acccccacc 987  Q
    |||||||||    
T  1346 acccccacc 1338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 65; Significance: 5e-28; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 888 - 976
Target Start/End: Original strand, 266 - 354
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatga 976  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||| ||||||||||    
T  266 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatga 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 206497 - 206586
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| | ||| |||||||||||    
T  206497 atgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgag 206586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 891 - 970
Target Start/End: Original strand, 24004 - 24083
Alignment:
Q  891 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtat 970  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||    
T  24004 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtat 24083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 173518 - 173607
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| | ||| |||||| ||||    
T  173518 atgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgag 173607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 39020 - 38931
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||| | ||| ||||| |||||    
T  39020 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgag 38931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 888 - 977
Target Start/End: Complemental strand, 1449 - 1360
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| | ||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||| | ||  |||||||||||    
T  1449 atgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgag 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 40182 - 40109
Alignment:
Q  888 atgttctattta--tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  40182 atgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaat 40109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 888 - 959
Target Start/End: Complemental strand, 138242 - 138169
Alignment:
Q  888 atgttctattta--tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  138242 atgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaat 138169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 888 - 977
Target Start/End: Original strand, 230867 - 230956
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgag 977  Q
    |||||||||||| |||| |||||||||||||  ||||||  ||||||||||| || |||||||||||||||| | |||  ||||||||||    
T  230867 atgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgag 230956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 906 - 959
Target Start/End: Original strand, 351360 - 351413
Alignment:
Q  906 ttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 959  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaat 351413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 880 - 937
Target Start/End: Complemental strand, 183163 - 183106
Alignment:
Q  880 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 937  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  183163 aaagagagatgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 933 - 985
Target Start/End: Complemental strand, 181969 - 181916
Alignment:
Q  933 atatgcggtacacccaaaggtgaaaatgattacggtatacatga-gaaccccca 985  Q
    |||||||||||| ||| |||||||||||| ||| |||||||||| |||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaccccca 181916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 888 - 925
Target Start/End: Complemental strand, 16160 - 16123
Alignment:
Q  888 atgttctatttatattttttaaaagataaatacaaggt 925  Q
    |||||||||||| |||||||||||||||||||||||||    
T  16160 atgttctatttaaattttttaaaagataaatacaaggt 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 915 - 979
Target Start/End: Complemental strand, 16095 - 16031
Alignment:
Q  915 aaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgattacggtatacatgagaa 979  Q
    ||||||||| || ||||| ||||||||||| |||||| ||||||| | ||| |||||||||||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaa 16031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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