View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4615-Insertion-6 (Length: 483)
Name: NF4615-Insertion-6
Description: NF4615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4615-Insertion-6 |
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Alignment Details
Target: chr8 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 7 - 481
Target Start/End: Complemental strand, 7346628 - 7346155
Alignment:
| Q |
7 |
attaggtgcatgctgcatgcatgtaagcttgatgttcaacaaactaatccgtctatgcacaattaataacatgcaattaagctatattgtccaactaaag |
106 |
Q |
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| T |
7346628 |
attaggtgcatgctgcatgcatgtaagcctgacgttcaacaaactaatccgtctatgcacaattaataacatgcaattaagctatgatgtccaactaaag |
7346529 |
T |
|
| Q |
107 |
tctctttgaaggtttttacttggatgacaatgctaaatcattagtcagtatcaagagaatggagcatcgaatatcttacaaatcttgaaagattcatgca |
206 |
Q |
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| T |
7346528 |
tctctttgaaggtttttacttggatgacaatgctaaatcattagtcagtatcaagagcatggagcatcgaatatcttacaaatcttgaaggattcatgca |
7346429 |
T |
|
| Q |
207 |
atagccacaagttattattagatgtaaaatagttagttgcaataatcagttaaattagactaaattacacaagataaatttagtctttgacgagcgctcc |
306 |
Q |
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| T |
7346428 |
atagccacaagttattattagatgtaaaatagttagttgcaataatcagttaaattagactaaattacacaagataaatttagtctttgatgagcgctcc |
7346329 |
T |
|
| Q |
307 |
ttagactaaattattaagtgatatgttggtcacttaggtattttaaagactaagccggggaaagcgaacactcatatggactccgtctaaccataaatca |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
7346328 |
ttagactaaattattaagtgatatgttggtcacttaggtattttaaagactaagccggggaaagcgaatactcatatggactccgtctaaccataaatca |
7346229 |
T |
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| Q |
407 |
atacaaaaataagtatttaaaccattcgcaaccgacttccttaagttatcatcaaacaacctatccatctcctca |
481 |
Q |
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|| ||||||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| |
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| T |
7346228 |
atccaaaaataagtatctaaaccattcgcaacc-aattccttaagttatcatcaaaccacctatccatcacctca |
7346155 |
T |
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