View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4615-Insertion-9 (Length: 353)
Name: NF4615-Insertion-9
Description: NF4615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4615-Insertion-9 |
 | |
|
| [»] chr2 (4 HSPs) |
| |
|
| [»] chr1 (4 HSPs) |
| |
|
| [»] chr7 (3 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 53 - 353
Target Start/End: Original strand, 45700118 - 45700417
Alignment:
| Q |
53 |
tctaatttttccgggcgcatacacgcaatagggatgcgggggtgatatgttccgacacgatggtaccattttccggcgcggtggtcaccggagcaaagtc |
152 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| |
|
|
| T |
45700118 |
tctaattttcccgggcgcatacatgcaatagggatgcggtggtgatatgttccgacacgatggtaccattttccggcgcggtggtcaccgaaacaaggtc |
45700217 |
T |
|
| Q |
153 |
acccaatattgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatc |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45700218 |
acccaatattgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatc |
45700317 |
T |
|
| Q |
253 |
tagaatgaaagtgacggtttggagactnnnnnnnnntgcctcctatcaaaaatttaatttcaggaagagatagagaacgaagagagggtgaatattatgt |
352 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45700318 |
tagaatgaaagtgacggtttggagact-aaaaaaaatgtctcctatcaaaaatttaatttcaggaagagatagagaacgaagagagggtgaatattatgt |
45700416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 59 - 353
Target Start/End: Original strand, 4920332 - 4920624
Alignment:
| Q |
59 |
ttttccgggcgcatacacgcaatagggatgcgggggtgatatgttccgacacgatggtaccattttccggcgcggtggtcaccggagcaaagtcacccaa |
158 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| ||||||||||||| || || |||||||| ||| ||| ||||||||||||||||||| ||||||||| |
|
|
| T |
4920332 |
ttttccgggtgcatacacgcaacagggatgcggtggtgatatgttccaacgcggtggtaccacttttcggtgcggtggtcaccggagcaaggtcacccaa |
4920431 |
T |
|
| Q |
159 |
tattgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatctagaat |
258 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||||||| |
|
|
| T |
4920432 |
tattgatttttctttgtggattttgtagaggatatgaaggagagtatgtttatgttggtggtttgtcacatgacattttgtggttgtctagatctagaat |
4920531 |
T |
|
| Q |
259 |
gaaagtgacggtttggagactnnnnnnnnntgcctcctatcaaaaatttaatttcaggaagagatagagaacgaagagagggtgaatattatgta |
353 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4920532 |
gaaagtgacggtttggagact--aagaaaatgcctcctatctaaaatttaattccaggaagagatagagaacgaagagaggatgaatattatgta |
4920624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 165 - 279
Target Start/End: Original strand, 28610662 - 28610777
Alignment:
| Q |
165 |
tttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatct-agaatgaaag |
263 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| |||| | |||||||| |
|
|
| T |
28610662 |
tttttctttgtgggttttgtagagaatatgaaggagaatatgtttatggtggtggtttgtcatgaaacaatttgtggtggtctagatctaataatgaaag |
28610761 |
T |
|
| Q |
264 |
tgacggtttggagact |
279 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
28610762 |
tgacggtttggagact |
28610777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 32469878 - 32469781
Alignment:
| Q |
165 |
tttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatctagaatgaaa |
262 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||| ||| ||||| ||||||| ||||| ||||||| |
|
|
| T |
32469878 |
tttttctttgtgggttttgtagagaatatgaaggagagtatatttatggtggtgttttgtcacgaaacaatttgtgatggtctagatctaaaatgaaa |
32469781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 168; Significance: 5e-90; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 70 - 353
Target Start/End: Complemental strand, 51446421 - 51446141
Alignment:
| Q |
70 |
catacacgcaatagggatgcgggggtgatatgttccgacacgatggtaccattttccggcgcggtggtcaccggagcaaagtcacccaatattgattttt |
169 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||||| | |||||||||||| || |||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
51446421 |
catacacgcaacagggatgcggtggtgatatgttccgacgcagtggtaccatttttcgacgcggtggtcaccggagcaaggtcacccaatattggttttt |
51446322 |
T |
|
| Q |
170 |
atttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatctagaatgaaagtgacgg |
269 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
51446321 |
ctttgtggattttgtagagaatatgaa-gaaagtatgtttatgttggtggtttgtcacatgacattttgtggtggtctagatctagaatgaaagtgacgg |
51446223 |
T |
|
| Q |
270 |
tttggagactnnnnnnnnntgcctcctatcaaaaatttaatttcaggaagagatagagaacgaagagagggtgaatattatgta |
353 |
Q |
| |
|
|||||| ||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
51446222 |
tttggaaact--aaaaaaatgcctcctatctaaaatttaatttcaggaagagatagagaacaaagagaggatgactattatgta |
51446141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 279
Target Start/End: Complemental strand, 14478994 - 14478879
Alignment:
| Q |
165 |
tttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatct-agaatgaaag |
263 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| | |||||||| |
|
|
| T |
14478994 |
tttttctttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcatgaaacaatttgtggtggtctagatctaataatgaaag |
14478895 |
T |
|
| Q |
264 |
tgacggtttggagact |
279 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
14478894 |
tggcggtttggagact |
14478879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 273
Target Start/End: Original strand, 5612433 - 5612582
Alignment:
| Q |
125 |
ccggcgcggtggtcaccggagcaaagtcacccaat-attgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttg |
223 |
Q |
| |
|
|||||||||||||| |||||| ||| ||| || || |||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5612433 |
ccggcgcggtggtcgccggagaaaattcatccgatcattg-tttttctttgtgggttttgtagaaaatatgaaggagagtatgtttatggtggtggtttg |
5612531 |
T |
|
| Q |
224 |
tcacatgacatcttgtggtggtctaaatct-agaatgaaagtgacggtttg |
273 |
Q |
| |
|
|||| ||| ||||||||||||| |||| | ||||||||||| |||||| |
|
|
| T |
5612532 |
tcacgaaacaatttgtggtggtctagatctaacaatgaaagtgagggtttg |
5612582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 26287159 - 26287051
Alignment:
| Q |
119 |
cattttccggcgcggtggtcaccggagcaaagtcacccaat-attgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggt |
217 |
Q |
| |
|
|||||||||||||||||||| |||||| ||| ||| || || |||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26287159 |
cattttccggcgcggtggtcgccggagaaaattcatccgatcattg-tttttctttgtgggttttgtagaaaatatgaaggagagtatgtttatggtggt |
26287061 |
T |
|
| Q |
218 |
ggtttgtcac |
227 |
Q |
| |
|
|||||||||| |
|
|
| T |
26287060 |
ggtttgtcac |
26287051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 156; Significance: 8e-83; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 130 - 353
Target Start/End: Complemental strand, 39982085 - 39981864
Alignment:
| Q |
130 |
gcggtggtcaccggagcaaagtcacccaatattgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacat |
229 |
Q |
| |
|
||||||||||||||||||| |||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39982085 |
gcggtggtcaccggagcaaggtcatcttatattgatttttctttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacat |
39981986 |
T |
|
| Q |
230 |
gacatcttgtggtggtctaaatctagaatgaaagtgacggtttggagactnnnnnnnnntgcctcctatcaaaaatttaatttcaggaagagatagagaa |
329 |
Q |
| |
|
||||| ||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
39981985 |
gacattttgtggtggtctagatttagaatgaaagtgacggtttggagact--aaaaaaatgcctcctatctaaaatttaatttcaggaagagatagagaa |
39981888 |
T |
|
| Q |
330 |
cgaagagagggtgaatattatgta |
353 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
39981887 |
cgaagagagggtgaatattatgta |
39981864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 279
Target Start/End: Complemental strand, 41328947 - 41328832
Alignment:
| Q |
165 |
tttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatct-agaatgaaag |
263 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| | |||||||| |
|
|
| T |
41328947 |
tttttctttgtgggttttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcatgaaacaatttgtggtggtctagatctaataatgaaag |
41328848 |
T |
|
| Q |
264 |
tgacggtttggagact |
279 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
41328847 |
tgacggtttggagact |
41328832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 43460214 - 43460322
Alignment:
| Q |
119 |
cattttccggcgcggtggtcaccggagcaaagtcacccaatattgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtg |
218 |
Q |
| |
|
|||||||| | ||||||||| |||||||||| ||| || || |||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
43460214 |
cattttccagtgcggtggtcgccggagcaaattcatccgatcatgatttttctttgtgggttttgtagagaatataaaggagagtatatttatggtggtg |
43460313 |
T |
|
| Q |
219 |
gtttgtcac |
227 |
Q |
| |
|
|||||||| |
|
|
| T |
43460314 |
ttttgtcac |
43460322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 120 - 279
Target Start/End: Complemental strand, 42871569 - 42871409
Alignment:
| Q |
120 |
attttccggcgcggtggtcaccggagcaaagtcacccaatattgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtgg |
219 |
Q |
| |
|
|||| |||| ||||||||| |||||||||||||| || || | ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42871569 |
atttcccggagcggtggtcgccggagcaaagtcatccgatcatagtttttctttgtgggttttgtagagaatatgaaggagagtatgtttatggtggtgg |
42871470 |
T |
|
| Q |
220 |
tttgtcacatgacatcttgtggtggtctaaatct-agaatgaaagtgacggtttggagact |
279 |
Q |
| |
|
|||||||| | | |||||||||||||||||| | |||| ||||||||||||||||||| |
|
|
| T |
42871469 |
tttgtcacgaaataatttgtggtggtctaaatctaacaatggaagtgacggtttggagact |
42871409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 39581331 - 39581288
Alignment:
| Q |
174 |
gtggattttgtagagaatatgaaggagagtatgtttatggtggt |
217 |
Q |
| |
|
||||||||||||| ||||| |||||||||||| ||||||||||| |
|
|
| T |
39581331 |
gtggattttgtagggaatacgaaggagagtatttttatggtggt |
39581288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 119 - 273
Target Start/End: Complemental strand, 54749852 - 54749697
Alignment:
| Q |
119 |
cattttccggcgcggtggtcaccggagcaaagtcacccaat-attgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggt |
217 |
Q |
| |
|
||||||||||||||||||| |||||| ||| ||| || || |||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
54749852 |
cattttccggcgcggtggttgccggagaaaattcatccgatcattg-tttttctttgtgggttttgtagaaaatatgaaggagagtatgtttatggtggt |
54749754 |
T |
|
| Q |
218 |
ggtttgtcacatgacatcttgtggtggtctaaatct-agaatgaaagtgacggtttg |
273 |
Q |
| |
|
|||||||||| ||| ||||||||||||| |||| | ||||||||||| |||||| |
|
|
| T |
54749753 |
ggtttgtcacgaaacaatttgtggtggtctagatctaacaatgaaagtgagggtttg |
54749697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 165 - 279
Target Start/End: Complemental strand, 49380431 - 49380316
Alignment:
| Q |
165 |
tttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatct-agaatgaaag |
263 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||| | |||||||| |
|
|
| T |
49380431 |
tttttctttgtgggttttgtagagaatatgaaggagagtatgtttatggtagtggtttgtcatgaaacaatttgtggtggtctagatctaataatgaaag |
49380332 |
T |
|
| Q |
264 |
tgacggtttggagact |
279 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
49380331 |
tgacggtttggagact |
49380316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 279
Target Start/End: Complemental strand, 13621502 - 13621387
Alignment:
| Q |
165 |
tttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatct-agaatgaaag |
263 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||| |||| | |||||||| |
|
|
| T |
13621502 |
tttttctttgtgggttttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcatgaaacaatttgtggcggtctggatctaataatgaaag |
13621403 |
T |
|
| Q |
264 |
tgacggtttggagact |
279 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
13621402 |
tgacggtttggagact |
13621387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 535090 - 534990
Alignment:
| Q |
122 |
tttccggcgcggtggtcaccggagcaaagtcacccaatattgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtt |
221 |
Q |
| |
|
||||||| |||||||||| |||||||| |||| ||||| ||| |||| || |||| |||||||| | ||||||||||||| | | ||||||||||||| |
|
|
| T |
535090 |
tttccggtgcggtggtcatcggagcaaggtcatccaatcatgaattttgtt-gtggtttttgtaggggatatgaaggagaggacatatatggtggtggtt |
534992 |
T |
|
| Q |
222 |
tg |
223 |
Q |
| |
|
|| |
|
|
| T |
534991 |
tg |
534990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 165 - 279
Target Start/End: Original strand, 26495695 - 26495810
Alignment:
| Q |
165 |
tttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatct-agaatgaaag |
263 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| | |||||||| |
|
|
| T |
26495695 |
tttttctttgtgggttttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcatgaaacaatttgtggtggtctagatctaataatgaaag |
26495794 |
T |
|
| Q |
264 |
tgacggtttggagact |
279 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
26495795 |
tggcggtttggagact |
26495810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 273
Target Start/End: Complemental strand, 1520569 - 1520414
Alignment:
| Q |
119 |
cattttccggcgcggtggtcaccggagcaaagtcacccaat-attgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggt |
217 |
Q |
| |
|
||||||||||||||| ||| |||||| ||| ||| ||||| | || ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1520569 |
cattttccggcgcggaggtagccggagaaaattcatccaatcaatg-tttttctttgtgggttttgtagaaaatatgaaggagagtatgtttatggtggt |
1520471 |
T |
|
| Q |
218 |
ggtttgtcacatgacatcttgtggtggtctaaatct-agaatgaaagtgacggtttg |
273 |
Q |
| |
|
|||||||||| ||| ||||||||||||| |||| | ||||||||||| |||||| |
|
|
| T |
1520470 |
ggtttgtcacgaaacaatttgtggtggtctagatctaacaatgaaagtgagggtttg |
1520414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 8362870 - 8362809
Alignment:
| Q |
165 |
tttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtca |
226 |
Q |
| |
|
||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8362870 |
tttttctttttgggttttgtagagaatatgaatgagagtatgtttatggtggtggtttgtca |
8362809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 31183416 - 31183471
Alignment:
| Q |
162 |
tgatttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggt |
217 |
Q |
| |
|
|||||||| || ||||||||||||| ||||| |||||||||||| ||||||||||| |
|
|
| T |
31183416 |
tgatttttcttggtggattttgtagggaatacgaaggagagtatttttatggtggt |
31183471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 279
Target Start/End: Complemental strand, 11723516 - 11723401
Alignment:
| Q |
165 |
tttttatttgtggattttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcacatgacatcttgtggtggtctaaatct-agaatgaaag |
263 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || |||| | |||||||| |
|
|
| T |
11723516 |
tttttctttgtgggttttgtagagaatatgaaggagagtatgtttatggtggtggtttgtcatgaaacaatttgtggtggtttagatctaataatgaaag |
11723417 |
T |
|
| Q |
264 |
tgacggtttggagact |
279 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
11723416 |
tggcggtttggagact |
11723401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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