View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4615_high_2 (Length: 377)
Name: NF4615_high_2
Description: NF4615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4615_high_2 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 18 - 377
Target Start/End: Complemental strand, 11697853 - 11697494
Alignment:
| Q |
18 |
tgaattgagacaggaaaataccacccttaatttctaaaggaaccttaagaacaaaataatcataaacataatgaaattcaccagtaatctttacatgaac |
117 |
Q |
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| T |
11697853 |
tgaattgagacaggaaaataccacccttaatttctaaaggaaccttaagaacaaaataatcataaacataatgaaattcaccagtaatctttacatgaac |
11697754 |
T |
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| Q |
118 |
aacttccatttttaaaatggtggaaacgaagacgatctcttacagtaatttccctttcatagatcatggaaatgtatttagtgtaagtatgacagtcact |
217 |
Q |
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| T |
11697753 |
aacttccatttttaaaatggtggaaacgaagacgatctcttacagtaatttccctttcatagatcatggaaatatatttagtgtaagtatgacagtcact |
11697654 |
T |
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| Q |
218 |
acacatcctaagatttcttgttattattaaaggagaaccctcagatgtatgtatgagtccaaaagcaattgctaacttctgactatgaaatttcaatctc |
317 |
Q |
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| T |
11697653 |
acacatcctaagatttcttgttattcttaaaggagaaccctcagatgtatgtatgagtccaaaagcaattgctaacttctgactatgaaatttcaatctc |
11697554 |
T |
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| Q |
318 |
tctttcttttcttcatcgtctacatcgagcaaaacttgtgatgtatctggtatgtaccct |
377 |
Q |
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| T |
11697553 |
tctttcttttcttcatcgtctacatcgagcaaaacttgtgatgtatctggtatgtaccct |
11697494 |
T |
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