View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4619_high_4 (Length: 233)
Name: NF4619_high_4
Description: NF4619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4619_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 214
Target Start/End: Complemental strand, 35874048 - 35873862
Alignment:
| Q |
29 |
ctttcccaatatcaattaataatgccacatctgttaagttggttattcattaacatattctgctgcaacttggcttgttcnnnnnnnnn-cattctgctg |
127 |
Q |
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| T |
35874048 |
ctttcccaatatcaattaataatgccacatctgttaagttggttattcattaacatattctgctgcaacttggcttgttcaaaaaaaaaacattctgctg |
35873949 |
T |
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| Q |
128 |
cgactttctgataccttaatactcctatttaagatttattcctcctccctataaactgcatagattaaatttcttaatctataaaat |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35873948 |
cgactttctgataccttaatactcctatttaagatttattcctcctccctataaactgcatagattaaatttcttaatctataaaat |
35873862 |
T |
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