View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4619_high_5 (Length: 215)
Name: NF4619_high_5
Description: NF4619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4619_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 1479378 - 1479558
Alignment:
| Q |
19 |
tctttggcagtagttgtgcattttagttttaggagaagattttgttttcttttcctctatagtgcactcaattccggttgatatttggtagttgttatgt |
118 |
Q |
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| T |
1479378 |
tctttggcagtagttgtgcattttagttttaggagaagattttgttttcttttcctctatagtgcactcaattccggttgatatttggtagttgttatgt |
1479477 |
T |
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| Q |
119 |
ttattagcatgttcctttgtcctccttgtatttcttgttatatgaatattctctatcaataaaaattttggattaaaaaat |
199 |
Q |
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| T |
1479478 |
ttattagcatgttcctttgtcctccttgtatttcttgttatatgaatattctctatcaataaattttttggattaaaaaat |
1479558 |
T |
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