View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4620_high_3 (Length: 237)
Name: NF4620_high_3
Description: NF4620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4620_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19474978 - 19475200
Alignment:
| Q |
1 |
agccctaaccaacaaaaacacatgtttagatggtcttgattctgcttctggtacatataaaccaattcttgtggattctattatcaacacttacaaacat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19474978 |
agccctaaccaacaaaaacacatgtttagatggtcttgattctgcttctggtacatataaaccaattcttgtggattctattatcaacacttacaaacat |
19475077 |
T |
|
| Q |
101 |
gtaagtaactctctttctatgctttctaatcatgcacctgagccttcaaatcaaaagggtcacaacaaaaatttggtttctccaaaatggttatcaaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19475078 |
gtaagtaactctctttctatgctttctaatcatgcacctgagccttcaaatcaaaagggtcacaacaaaaatttggtttctccaaaatggttatcaaaaa |
19475177 |
T |
|
| Q |
201 |
ggttagatattgatgaatatgat |
223 |
Q |
| |
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|||||||| |||||||||||||| |
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| T |
19475178 |
ggttagattttgatgaatatgat |
19475200 |
T |
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