View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4621-Insertion-4 (Length: 271)
Name: NF4621-Insertion-4
Description: NF4621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4621-Insertion-4 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 271
Target Start/End: Complemental strand, 32043673 - 32043415
Alignment:
| Q |
8 |
ccaaattctactgacttagtcccacatcaaaaaaccagtggtagaggaccctgtttttaaatttatattggttaataatgatagtgagtagtatattgtg |
107 |
Q |
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| T |
32043673 |
ccaaattctactgacttagtcccacataaaaaaaccagtggtagaggaccctgtttttaaatttatattggttaataatgatagtgagtagtatattgtg |
32043574 |
T |
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| Q |
108 |
tattttcatgcaaataacataacataacataaggtgacgcaagaaaaaataaggaagaaagtgacatgtaagagagcagatgtatatatttaatgccgtt |
207 |
Q |
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| T |
32043573 |
tattttcatgcaaataacataacataa-----ggtgacacaagaaaaaataaggaagaaagtgacatgtaagagagcagatgtatatatttaatgccgtt |
32043479 |
T |
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| Q |
208 |
tgcatcagccaccagcagtgggtggctgtgtcatggtatcagtgggagataagtactatactgc |
271 |
Q |
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| T |
32043478 |
tgcatcagccaccagcagtgggtggctgtgtcatggtatcagtgggagataagtactatactgc |
32043415 |
T |
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