View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4621_low_1 (Length: 506)

Name: NF4621_low_1
Description: NF4621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4621_low_1
NF4621_low_1
[»] chr7 (65 HSPs)
chr7 (7-347)||(22111008-22111348)
chr7 (7-347)||(40583241-40583581)
chr7 (247-347)||(3157532-3157631)
chr7 (247-347)||(18206238-18206337)
chr7 (247-347)||(19932974-19933073)
chr7 (247-347)||(35181288-35181387)
chr7 (247-347)||(42617767-42617867)
chr7 (247-347)||(43107824-43107923)
chr7 (247-347)||(23106549-23106648)
chr7 (247-347)||(7989226-7989326)
chr7 (247-347)||(9818564-9818663)
chr7 (247-347)||(10720489-10720588)
chr7 (247-347)||(41889267-41889366)
chr7 (247-347)||(40560478-40560577)
chr7 (247-347)||(47383502-47383601)
chr7 (247-347)||(48879484-48879583)
chr7 (253-347)||(41815618-41815711)
chr7 (251-340)||(32491030-32491118)
chr7 (247-347)||(41890163-41890261)
chr7 (247-340)||(44600549-44600641)
chr7 (247-347)||(21654040-21654139)
chr7 (424-487)||(22111425-22111488)
chr7 (424-487)||(40583101-40583164)
chr7 (243-329)||(45599019-45599106)
chr7 (424-487)||(34808175-34808238)
chr7 (424-487)||(35181148-35181211)
chr7 (424-487)||(48879344-48879407)
chr7 (247-347)||(35084019-35084119)
chr7 (424-487)||(23106409-23106472)
chr7 (247-347)||(23731656-23731757)
chr7 (424-487)||(42617627-42617690)
chr7 (424-487)||(45598860-45598923)
chr7 (286-347)||(19964151-19964212)
chr7 (424-487)||(43108000-43108064)
chr7 (247-347)||(48937809-48937907)
chr7 (278-341)||(34808321-34808384)
chr7 (274-329)||(36576531-36576585)
chr7 (424-487)||(47383362-47383425)
chr7 (426-487)||(21654218-21654279)
chr7 (429-477)||(18206419-18206467)
chr7 (424-487)||(3157392-3157455)
chr7 (424-487)||(19933150-19933213)
chr7 (424-487)||(19964289-19964352)
chr7 (424-487)||(23731516-23731579)
chr7 (424-487)||(36576374-36576437)
chr7 (424-487)||(40560338-40560401)
chr7 (432-487)||(41815796-41815851)
chr7 (424-487)||(44600402-44600465)
chr7 (424-481)||(41889133-41889190)
chr7 (426-482)||(41890339-41890396)
chr7 (424-482)||(48937984-48938043)
chr7 (424-482)||(48943010-48943069)
chr7 (247-329)||(29235988-29236068)
chr7 (250-327)||(30082467-30082543)
chr7 (424-477)||(32491202-32491255)
chr7 (247-329)||(40593932-40594013)
chr7 (431-472)||(9818450-9818491)
chr7 (431-472)||(10720375-10720416)
chr7 (424-477)||(30082319-30082372)
chr7 (247-347)||(33153135-33153234)
chr7 (247-297)||(18800686-18800735)
chr7 (424-477)||(18800869-18800922)
chr7 (424-469)||(33153013-33153058)
chr7 (424-481)||(35084196-35084253)
chr7 (255-347)||(28608469-28608560)
[»] chr4 (49 HSPs)
chr4 (247-347)||(30777581-30777681)
chr4 (247-347)||(29180339-29180438)
chr4 (247-347)||(30776411-30776510)
chr4 (247-347)||(39969916-39970015)
chr4 (247-347)||(43980592-43980691)
chr4 (247-347)||(3043094-3043193)
chr4 (247-347)||(10591430-10591529)
chr4 (247-347)||(55937630-55937729)
chr4 (249-347)||(9798004-9798101)
chr4 (247-341)||(53677406-53677499)
chr4 (247-340)||(28681760-28681852)
chr4 (247-347)||(29899809-29899908)
chr4 (251-347)||(37788545-37788640)
chr4 (253-336)||(49902132-49902214)
chr4 (247-329)||(38187655-38187736)
chr4 (255-340)||(32012261-32012346)
chr4 (247-347)||(50768539-50768638)
chr4 (247-347)||(47807289-47807387)
chr4 (272-347)||(38940963-38941038)
chr4 (247-337)||(51495253-51495341)
chr4 (424-487)||(32012430-32012493)
chr4 (255-347)||(5222227-5222319)
chr4 (253-340)||(1620130-1620217)
chr4 (424-487)||(3043270-3043333)
chr4 (424-487)||(10591606-10591669)
chr4 (424-487)||(38940823-38940886)
chr4 (424-487)||(49901981-49902044)
chr4 (424-487)||(52713017-52713080)
chr4 (424-487)||(53677582-53677645)
chr4 (425-487)||(9798179-9798241)
chr4 (424-487)||(1619983-1620046)
chr4 (424-487)||(29180515-29180578)
chr4 (424-487)||(30776587-30776650)
chr4 (424-487)||(30777441-30777504)
chr4 (424-487)||(39970092-39970155)
chr4 (424-487)||(43980452-43980515)
chr4 (424-487)||(29899669-29899732)
chr4 (424-487)||(37788405-37788468)
chr4 (424-479)||(47807157-47807212)
chr4 (424-487)||(50768399-50768462)
chr4 (424-479)||(51495111-51495166)
chr4 (429-487)||(55937811-55937869)
chr4 (424-487)||(27750451-27750514)
chr4 (424-487)||(38187829-38187892)
chr4 (276-347)||(52713149-52713220)
chr4 (287-347)||(17236262-17236322)
chr4 (251-334)||(30011884-30011967)
chr4 (247-301)||(47868024-47868077)
chr4 (286-334)||(27750313-27750361)
[»] chr3 (50 HSPs)
chr3 (247-347)||(21654343-21654442)
chr3 (246-347)||(46580633-46580733)
chr3 (249-347)||(34022697-34022794)
chr3 (254-347)||(31126310-31126402)
chr3 (247-347)||(26641035-26641134)
chr3 (247-347)||(32322162-32322261)
chr3 (247-347)||(55400836-55400935)
chr3 (247-347)||(37324006-37324105)
chr3 (247-347)||(53020281-53020380)
chr3 (243-347)||(45347632-45347735)
chr3 (247-339)||(49068157-49068248)
chr3 (247-347)||(46295999-46296099)
chr3 (247-336)||(51426728-51426816)
chr3 (247-327)||(23514559-23514639)
chr3 (424-487)||(1335068-1335131)
chr3 (276-347)||(28793260-28793331)
chr3 (249-336)||(46820143-46820229)
chr3 (247-329)||(13541349-13541430)
chr3 (243-340)||(43576062-43576158)
chr3 (243-347)||(51255284-51255387)
chr3 (424-481)||(46580500-46580557)
chr3 (247-347)||(16739088-16739182)
chr3 (243-347)||(51309511-51309615)
chr3 (424-487)||(13541235-13541298)
chr3 (424-487)||(23513525-23513588)
chr3 (424-487)||(26641211-26641274)
chr3 (424-487)||(55400696-55400759)
chr3 (257-347)||(1335208-1335297)
chr3 (424-478)||(49068018-49068072)
chr3 (424-481)||(31126176-31126233)
chr3 (424-487)||(21654202-21654266)
chr3 (255-347)||(36188937-36189028)
chr3 (424-487)||(53020140-53020204)
chr3 (247-347)||(52252134-52252230)
chr3 (424-472)||(37324183-37324231)
chr3 (424-472)||(52172109-52172157)
chr3 (429-477)||(52252004-52252052)
chr3 (424-487)||(32322338-32322401)
chr3 (424-487)||(45781355-45781418)
chr3 (424-487)||(46296176-46296239)
chr3 (424-487)||(46820007-46820070)
chr3 (433-487)||(16739263-16739317)
chr3 (424-477)||(51255154-51255207)
chr3 (424-487)||(36189105-36189169)
chr3 (293-337)||(45781505-45781549)
chr3 (426-487)||(51426575-51426638)
chr3 (255-337)||(30612286-30612368)
chr3 (424-487)||(28793119-28793183)
chr3 (424-471)||(43575931-43575978)
chr3 (247-334)||(54464815-54464902)
[»] chr8 (50 HSPs)
chr8 (249-347)||(35344467-35344565)
chr8 (243-347)||(44411167-44411270)
chr8 (247-347)||(11044157-11044256)
chr8 (247-347)||(27752686-27752785)
chr8 (247-347)||(35260157-35260256)
chr8 (247-347)||(11992828-11992927)
chr8 (247-347)||(27621230-27621329)
chr8 (247-347)||(37598169-37598268)
chr8 (247-347)||(31132993-31133090)
chr8 (253-347)||(24612445-24612541)
chr8 (247-347)||(3100053-3100152)
chr8 (251-347)||(44052721-44052816)
chr8 (247-347)||(25321548-25321647)
chr8 (243-347)||(35346263-35346365)
chr8 (247-326)||(39187351-39187429)
chr8 (247-347)||(34713628-34713727)
chr8 (247-312)||(32678479-32678544)
chr8 (266-337)||(36538168-36538239)
chr8 (247-347)||(12108255-12108355)
chr8 (424-487)||(24612618-24612681)
chr8 (424-487)||(27621090-27621153)
chr8 (424-487)||(32678647-32678710)
chr8 (424-487)||(35346442-35346505)
chr8 (424-487)||(37598030-37598093)
chr8 (424-487)||(44358629-44358692)
chr8 (424-487)||(44411347-44411410)
chr8 (426-487)||(35260017-35260078)
chr8 (424-487)||(35344326-35344390)
chr8 (424-487)||(44052580-44052644)
chr8 (424-487)||(11044017-11044080)
chr8 (424-487)||(37567569-37567632)
chr8 (424-487)||(39187193-39187256)
chr8 (247-308)||(37566459-37566519)
chr8 (424-487)||(3099912-3099976)
chr8 (424-487)||(11992687-11992751)
chr8 (424-476)||(31133167-31133219)
chr8 (424-487)||(25321724-25321787)
chr8 (424-487)||(27752546-27752609)
chr8 (424-487)||(33851161-33851224)
chr8 (424-487)||(36538018-36538081)
chr8 (424-481)||(12108136-12108192)
chr8 (255-327)||(2238565-2238636)
chr8 (424-482)||(40487803-40487860)
chr8 (255-327)||(24510667-24510738)
chr8 (424-464)||(34713511-34713551)
chr8 (247-347)||(41426439-41426538)
chr8 (304-347)||(37567449-37567492)
chr8 (299-340)||(40486505-40486546)
chr8 (424-461)||(41426325-41426362)
chr8 (303-340)||(44358508-44358545)
[»] scaffold0495 (2 HSPs)
scaffold0495 (247-347)||(4727-4826)
scaffold0495 (424-487)||(4588-4650)
[»] chr6 (24 HSPs)
chr6 (247-347)||(10228009-10228108)
chr6 (247-347)||(5121417-5121516)
chr6 (247-347)||(17721770-17721869)
chr6 (249-347)||(30766543-30766640)
chr6 (251-347)||(30949232-30949327)
chr6 (249-340)||(12278810-12278900)
chr6 (247-340)||(374203-374295)
chr6 (424-487)||(33756213-33756276)
chr6 (424-487)||(374056-374119)
chr6 (424-487)||(12278663-12278726)
chr6 (424-487)||(17598250-17598313)
chr6 (424-487)||(17721946-17722009)
chr6 (424-487)||(30766403-30766466)
chr6 (247-334)||(31887081-31887168)
chr6 (424-487)||(10227869-10227932)
chr6 (424-487)||(30949092-30949155)
chr6 (287-347)||(17598390-17598450)
chr6 (255-347)||(21964054-21964145)
chr6 (424-472)||(31887258-31887306)
chr6 (247-292)||(17599464-17599508)
chr6 (255-336)||(32882660-32882740)
chr6 (304-343)||(33756357-33756396)
chr6 (247-301)||(7274836-7274889)
chr6 (424-470)||(16655172-16655217)
[»] chr2 (50 HSPs)
chr2 (247-347)||(792316-792415)
chr2 (247-347)||(21539854-21539953)
chr2 (247-347)||(14565333-14565432)
chr2 (251-347)||(35832509-35832604)
chr2 (247-347)||(4092108-4092207)
chr2 (247-347)||(10478275-10478374)
chr2 (247-347)||(10979266-10979365)
chr2 (247-343)||(15858649-15858744)
chr2 (247-347)||(43075847-43075945)
chr2 (253-347)||(38549609-38549702)
chr2 (254-347)||(8784492-8784585)
chr2 (247-340)||(38071410-38071502)
chr2 (247-347)||(44803995-44804094)
chr2 (247-340)||(29513980-29514071)
chr2 (247-340)||(43451609-43451701)
chr2 (251-347)||(28492617-28492712)
chr2 (247-347)||(33635433-33635532)
chr2 (254-336)||(5091507-5091588)
chr2 (247-340)||(29514435-29514527)
chr2 (247-327)||(38564677-38564756)
chr2 (247-347)||(28424368-28424469)
chr2 (424-487)||(792492-792555)
chr2 (424-487)||(4033811-4033874)
chr2 (424-487)||(8784352-8784415)
chr2 (424-487)||(21539714-21539777)
chr2 (424-487)||(29514155-29514218)
chr2 (425-487)||(28424231-28424293)
chr2 (424-492)||(15858746-15858814)
chr2 (424-487)||(22162277-22162340)
chr2 (424-487)||(28492477-28492540)
chr2 (424-487)||(35832369-35832432)
chr2 (424-487)||(43075707-43075770)
chr2 (291-347)||(4033678-4033734)
chr2 (424-472)||(5091676-5091724)
chr2 (247-347)||(18833869-18833969)
chr2 (424-487)||(29514611-29514674)
chr2 (424-487)||(38549779-38549842)
chr2 (424-477)||(43451472-43451525)
chr2 (424-487)||(14565509-14565573)
chr2 (247-347)||(15068832-15068932)
chr2 (424-487)||(9294612-9294675)
chr2 (424-487)||(33635293-33635356)
chr2 (424-472)||(4091983-4092031)
chr2 (424-487)||(44803856-44803918)
chr2 (424-472)||(10478150-10478198)
chr2 (249-336)||(13822729-13822818)
chr2 (424-471)||(38071574-38071621)
chr2 (250-347)||(9294752-9294849)
chr2 (424-477)||(13822906-13822959)
chr2 (249-301)||(35517270-35517321)
[»] chr1 (63 HSPs)
chr1 (247-347)||(23873791-23873890)
chr1 (247-339)||(18913308-18913400)
chr1 (247-347)||(43656001-43656100)
chr1 (247-347)||(18852320-18852419)
chr1 (247-347)||(26907055-26907154)
chr1 (247-347)||(35941938-35942037)
chr1 (247-347)||(38942404-38942504)
chr1 (247-347)||(39026209-39026309)
chr1 (243-347)||(40960434-40960537)
chr1 (247-347)||(46949418-46949517)
chr1 (247-347)||(49924516-49924615)
chr1 (247-347)||(35189298-35189398)
chr1 (247-340)||(44875283-44875375)
chr1 (247-347)||(25990845-25990944)
chr1 (247-347)||(26479836-26479936)
chr1 (243-347)||(31970269-31970372)
chr1 (251-347)||(40935581-40935676)
chr1 (250-347)||(28017755-28017849)
chr1 (247-347)||(15285900-15285998)
chr1 (247-347)||(28916480-28916578)
chr1 (247-347)||(9128140-9128239)
chr1 (247-347)||(29488845-29488944)
chr1 (241-335)||(45357833-45357928)
chr1 (247-347)||(40220153-40220255)
chr1 (247-347)||(15311274-15311373)
chr1 (247-347)||(18036641-18036740)
chr1 (425-487)||(46949278-46949340)
chr1 (251-347)||(6848278-6848372)
chr1 (257-343)||(47997055-47997140)
chr1 (424-481)||(15285767-15285824)
chr1 (424-487)||(23873967-23874030)
chr1 (424-487)||(25990705-25990768)
chr1 (424-487)||(26907229-26907292)
chr1 (424-487)||(28017615-28017678)
chr1 (424-487)||(35941798-35941861)
chr1 (424-487)||(43656177-43656240)
chr1 (424-487)||(44875136-44875199)
chr1 (247-320)||(4529300-4529371)
chr1 (424-487)||(4529144-4529207)
chr1 (424-487)||(9128000-9128063)
chr1 (424-487)||(18036501-18036564)
chr1 (424-487)||(18852180-18852243)
chr1 (424-487)||(28916655-28916718)
chr1 (424-487)||(29488705-29488768)
chr1 (424-487)||(38942581-38942644)
chr1 (424-487)||(40960614-40960677)
chr1 (273-347)||(35884308-35884382)
chr1 (425-487)||(47996911-47996973)
chr1 (424-487)||(31970449-31970512)
chr1 (424-487)||(39026386-39026449)
chr1 (424-487)||(40220014-40220076)
chr1 (430-480)||(15311142-15311192)
chr1 (429-487)||(49924376-49924434)
chr1 (424-477)||(18913486-18913539)
chr1 (247-322)||(36037359-36037433)
chr1 (424-487)||(40935753-40935816)
chr1 (424-481)||(26479702-26479759)
chr1 (7-64)||(28734081-28734138)
chr1 (424-487)||(6848446-6848510)
chr1 (424-487)||(35189157-35189221)
chr1 (433-487)||(45358025-45358079)
chr1 (424-487)||(36383885-36383948)
chr1 (247-301)||(24728587-24728640)
[»] chr5 (38 HSPs)
chr5 (247-347)||(8145974-8146073)
chr5 (247-347)||(31316762-31316861)
chr5 (247-347)||(25962409-25962508)
chr5 (247-341)||(35462680-35462773)
chr5 (247-347)||(8541525-8541624)
chr5 (247-347)||(12638988-12639086)
chr5 (247-347)||(30086507-30086608)
chr5 (247-347)||(16286044-16286143)
chr5 (253-347)||(20914958-20915051)
chr5 (243-341)||(31690577-31690674)
chr5 (247-347)||(13146828-13146927)
chr5 (247-347)||(24432361-24432460)
chr5 (424-487)||(8146150-8146213)
chr5 (424-487)||(8541701-8541764)
chr5 (247-336)||(42365145-42365233)
chr5 (271-347)||(37066207-37066283)
chr5 (424-487)||(12638848-12638911)
chr5 (424-487)||(31316938-31317001)
chr5 (424-487)||(31690757-31690820)
chr5 (426-487)||(35462857-35462918)
chr5 (424-487)||(13146688-13146751)
chr5 (424-487)||(30086685-30086748)
chr5 (426-472)||(17825337-17825383)
chr5 (429-487)||(25962594-25962652)
chr5 (424-487)||(20914818-20914881)
chr5 (247-334)||(36413897-36413983)
chr5 (424-482)||(37066360-37066418)
chr5 (424-477)||(16286220-16286273)
chr5 (424-472)||(42365009-42365057)
chr5 (424-487)||(8143893-8143956)
chr5 (424-482)||(24432537-24432595)
chr5 (424-487)||(24439531-24439594)
chr5 (247-347)||(24439671-24439770)
chr5 (247-298)||(2002096-2002146)
chr5 (243-304)||(11261842-11261901)
chr5 (247-301)||(43589923-43589976)
chr5 (424-477)||(2002270-2002323)
chr5 (249-301)||(25841011-25841062)
[»] scaffold0300 (1 HSPs)
scaffold0300 (247-301)||(534-587)


Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 7 - 347
Target Start/End: Original strand, 22111008 - 22111348
Alignment:
Q  7 agaagaaaaacaaaaacatgctgaagaagattggagtgttgtggaggaagaatcatcattaagtagattttaattgtatgttgtttcattgtactcttta 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22111008 agaagaaaaacaaaaacatgctgaagaagattggagtgttgtggaggaagaatcatcattaagtagattttaattgtatgttgtttcattgtactcttta 22111107  T
Q  107 tttttattggatgatgttattattcttaggtattactagtgtctggtaccaactttcttgaatcaagctgttcaaccgttataggaccctactgtatttt 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22111108 tttttattggatgttgttattattcttaggtattactagtgtctggtaccaactttcttgaatcaagctgttcaaccgttataggaccctactgtatttt 22111207  T
Q  207 gtttctacaagtagatcctgttttattgtcatcaaatccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacactt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22111208 gtttctacaagtagatcctgttttattgtcatcaaatccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacactt 22111307  T
Q  307 agtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  22111308 agtgatttgaggtataattttttgtgttctccttggaataa 22111348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 7 - 347
Target Start/End: Complemental strand, 40583581 - 40583241
Alignment:
Q  7 agaagaaaaacaaaaacatgctgaagaagattggagtgttgtggaggaagaatcatcattaagtagattttaattgtatgttgtttcattgtactcttta 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40583581 agaagaaaaacaaaaacatgctgaagaagattggagtgttgtggaggaagaatcatcattaagtagattttaattgtatgttgtttcattgtactcttta 40583482  T
Q  107 tttttattggatgatgttattattcttaggtattactagtgtctggtaccaactttcttgaatcaagctgttcaaccgttataggaccctactgtatttt 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40583481 tttttattggatgttgttattattcttaggtattactagtgtctggtaccaactttcttgaatcaagctgttcaaccgttataggaccctactgtatttt 40583382  T
Q  207 gtttctacaagtagatcctgttttattgtcatcaaatccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacactt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40583381 gtttctacaagtagatcctgttttattgtcatcaaatccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacactt 40583282  T
Q  307 agtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  40583281 agtgatttgaggtataattttttgtgttctccttggaataa 40583241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 3157631 - 3157532
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  3157631 tccgtcctaatttataagcaaaa-aacactaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctctttgaaata 3157533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 18206238 - 18206337
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  18206238 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaata 18206336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 19932974 - 19933073
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  19932974 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaata 19933072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 35181387 - 35181288
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||    
T  35181387 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttactgatttgaggtataattttttgtgttctccttggaata 35181289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 42617867 - 42617767
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||    
T  42617867 tccgtcctaatttataagcaaaaaaacactaattcacacttattaaaaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaata 42617768  T
Q  347 a 347  Q
    |    
T  42617767 a 42617767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 43107824 - 43107923
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  43107824 tccgtcctaatttataagcaaaa-aacactaattcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 43107922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 23106648 - 23106549
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  23106648 tccgtcttaatttataagcaaaa-aatactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttaaaata 23106550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 7989226 - 7989326
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||| |||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  7989226 tccgttctattttataagtaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 7989325  T
Q  347 a 347  Q
    |    
T  7989326 a 7989326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 9818663 - 9818564
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  9818663 tccgtcgtaatttataagtcaaa-aacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctccttggaata 9818565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 10720588 - 10720489
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  10720588 tccgtcgtaatttataagtcaaa-aacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctccttggaata 10720490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 41889366 - 41889267
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  41889366 tccgttctaatttataagcaaaa-aacattaattcacacttattaagaaaactaacacttagtgatttgatgtataattttttgtattctccttgaaata 41889268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 40560577 - 40560478
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  40560577 tccgtcctaatttataagcaaaa-aacattaatttacacttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctccttgaaata 40560479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 47383601 - 47383502
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| |||||    
T  47383601 tccgtcctaatttataagcaaaa-aacacaaattcacacatattaagaaaactaacacttaatgatttgagatataattttttgtgttctccttaaaata 47383503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 48879583 - 48879484
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| ||||    
T  48879583 tccgttctaatttataagcaaaa-aacactaatttacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattctccttggaata 48879485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 347
Target Start/End: Original strand, 41815618 - 41815711
Alignment:
Q  253 ctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  41815618 ctaatttataagcaaaa-aataataattgacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 41815711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 32491030 - 32491118
Alignment:
Q  251 tcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  32491030 tcctaatttataagcaaaa-aacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttctcctt 32491118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 41890163 - 41890261
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| ||||  ||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||    
T  41890163 tccgtcctaatttataagaaaaa--acactaattcaaacttattaagaaaactaacatttaatgatttggggtataattttttgtgttctccttgaaata 41890260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 247 - 340
Target Start/End: Complemental strand, 44600641 - 44600549
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  44600641 tccgttctaatttataagcaaaa-aatactaattcacatttattaagaaaactaacacttagcgatttgaggtataattttttgtgttctcctt 44600549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 21654040 - 21654139
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||||||| ||||||||||| ||||    
T  21654040 tccgttctaatttataagcaaaa-aacactaattcacacttattaagaaaactaatacttagtgacttgagatatcattttttgtgttctccttggaata 21654138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 22111425 - 22111488
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22111425 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 22111488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 40583164 - 40583101
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40583164 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 40583101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 45599106 - 45599019
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 329  Q
    ||||||||||||||||||||| ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45599106 tccttccgtcctaatttataaacaaaaaaaacagtaattcgcacttattaagaaaactaacacttagtgatttgaggtataatttttt 45599019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 34808238 - 34808175
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  34808238 gcaatttgcatttaattttacgttgaaaaagatgatttgtttgaaaaaacataataataacata 34808175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 35181211 - 35181148
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  35181211 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcata 35181148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 48879407 - 48879344
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  48879407 gcaatttgcatttaattttacattgaaaaagatgatttttttgaaaaaacataataataacata 48879344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 35084019 - 35084119
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||| ||||||||||||||| ||||| |||||||||||| |||||||||||| ||  ||| ||||||| |||| |||||| |||||| |||||||||    
T  35084019 tccgtcccaatttataagcaaaaaaacacaaattcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttcttcttgaaata 35084118  T
Q  347 a 347  Q
    |    
T  35084119 a 35084119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 23106472 - 23106409
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  23106472 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 23106409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 23731757 - 23731656
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaacta--acacttagtgatttgaggtataattttttatgttctccttgaaa 344  Q
    |||||||||||||||||  |||| ||| |||||||||| |||||||||||||||  |||||||||||||||| |||| ||||||| ||||||||||| ||    
T  23731757 tccgtcctaatttataaaaaaaa-aacgctaattcacatttattaagaaaactataacacttagtgatttgatgtatgattttttgtgttctccttggaa 23731659  T
Q  345 taa 347  Q
    |||    
T  23731658 taa 23731656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 42617690 - 42617627
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  42617690 gcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaaacataataatatcata 42617627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 45598923 - 45598860
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  45598923 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 45598860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 19964151 - 19964212
Alignment:
Q  286 ttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  19964151 ttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataa 19964212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 43108000 - 43108064
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttg-aaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  43108000 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataataacata 43108064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 48937809 - 48937907
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||| |||||||||| ||||| ||||| |||||| |||||||||||||||  |||||||||| || ||||||||||||||| ||||||||||| ||||    
T  48937809 tccgtcttaatttataaacaaaa-aacacaaattcatacttattaagaaaacatacacttagtggtt-gaggtataattttttgtgttctccttggaata 48937906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 34808384 - 34808321
Alignment:
Q  278 attcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttg 341  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  34808384 attcacacttagtaagaaaactaatacttagtgatttgaggtataattttttgtgttcttcttg 34808321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 36576585 - 36576531
Alignment:
Q  274 actaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 329  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36576585 actaattcacacttat-aagaaaactaacacttagtgatttgaggtataatttttt 36576531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 47383425 - 47383362
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  47383425 gcaatttacatttaattttacattggaaaagatgatttgtttgaaaaaacataataatatcata 47383362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 426 - 487
Target Start/End: Original strand, 21654218 - 21654279
Alignment:
Q  426 aatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||    
T  21654218 aatttgcatttaattttacattggaaaaggtgatttgtttgaaaaaacataataatagcata 21654279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 18206419 - 18206467
Alignment:
Q  429 ttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18206419 ttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataa 18206467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 3157455 - 3157392
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||| ||||||||||| ||||    
T  3157455 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaatacataataatagcata 3157392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 19933150 - 19933213
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  19933150 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 19933213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 19964289 - 19964352
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  19964289 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 19964352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 23731579 - 23731516
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  23731579 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 23731516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 36576437 - 36576374
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||    
T  36576437 gcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcata 36576374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 40560401 - 40560338
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  40560401 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 40560338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 432 - 487
Target Start/End: Original strand, 41815796 - 41815851
Alignment:
Q  432 catttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  41815796 catttaattttacattggaaaatatgatttatttgaaaaaacataataatagcata 41815851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 44600465 - 44600402
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| ||||||||||||||||| || |||| ||||||| |||||||||||||||||||||||||    
T  44600465 gcaacttgcatttaattttacactggaaaagatgatttatttgaaaaaacataataataacata 44600402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 41889190 - 41889133
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataat 481  Q
    ||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||    
T  41889190 gcaatttgctttgaattttacattggaaaagatgatttgtttgaaaaaacataataat 41889133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 426 - 482
Target Start/End: Original strand, 41890339 - 41890396
Alignment:
Q  426 aatttgcatttaattttacattgaaaaatatgatttgtttg-aaaaaacataataata 482  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  41890339 aatttgcatttaattttacattaaaaaagatgatttgtttgaaaaaaacataataata 41890396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 48937984 - 48938043
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttg-aaaaaacataataata 482  Q
    |||||||| |||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  48937984 gcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaaacataataata 48938043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 48943010 - 48943069
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttg-aaaaaacataataata 482  Q
    |||||||| |||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  48943010 gcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaaacataataata 48943069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 29235988 - 29236068
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 329  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||||| | | || ||||  ||||||||||||||||||    
T  29235988 tccgtcctaatttataagcaaaa-aacacaaattcacactcattaagaaaa-tgaaacatagtagtttgaggtataatttttt 29236068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 30082543 - 30082467
Alignment:
Q  250 gtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttt 327  Q
    |||| |||||||| |||||| ||||| |||||||||||||||||||||| || || ||||  ||||||||||||||||    
T  30082543 gtcccaatttataggcaaaa-aacacaaattcacacttattaagaaaacaaaaacatagtagtttgaggtataatttt 30082467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 32491202 - 32491255
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    |||| |||||||||||||||||||  |||| |||||||||||||||||||||||    
T  32491202 gcaacttgcatttaattttacattcgaaaagatgatttgtttgaaaaaacataa 32491255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 40594013 - 40593932
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 329  Q
    ||||||||||||||||||||||| || || |||||||| ||||||||||||  || || | ||| |||||| |||||||||||    
T  40594013 tccgtcctaatttataagcaaaa-aatacaaattcacatttattaagaaaaaaaaaacatggtggtttgagatataatttttt 40593932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 431 - 472
Target Start/End: Complemental strand, 9818491 - 9818450
Alignment:
Q  431 gcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  9818491 gcatttaattttacattggaaaagatgatttgtttgaaaaaa 9818450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 431 - 472
Target Start/End: Complemental strand, 10720416 - 10720375
Alignment:
Q  431 gcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  10720416 gcatttaattttacattggaaaagatgatttgtttgaaaaaa 10720375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 477
Target Start/End: Complemental strand, 30082372 - 30082319
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    ||||||||||||||||||||| ||| |||| ||||||| ||||||| |||||||    
T  30082372 gcaatttgcatttaattttactttggaaaagatgatttttttgaaataacataa 30082319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 33153234 - 33153135
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||| |||||||||| |||| || |  |||||||||||||||| ||||| || || || |  ||||| |||||||||||| |||||| |||||||||    
T  33153234 tccgtcccaatttataagtaaaa-aatataaattcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgttcttcttgaaata 33153136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 18800686 - 18800735
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaa 297  Q
    ||||||| ||||||||||||||| || || |||||||||||||||||||||    
T  18800686 tccgtcccaatttataagcaaaa-aatacaaattcacacttattaagaaaa 18800735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 18800869 - 18800922
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    ||||||| ||||||||||||| |||||||| |||||||  |||||| |||||||    
T  18800869 gcaatttacatttaattttactttgaaaaagatgattttcttgaaataacataa 18800922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 33153058 - 33153013
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaa 469  Q
    ||||||||||||||||||||| |||||||| || |||| |||||||    
T  33153058 gcaatttgcatttaattttactttgaaaaagataatttttttgaaa 33153013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 35084196 - 35084253
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataat 481  Q
    ||||||||||||||||||||| ||| |||  ||||||| | |||| ||||||||||||    
T  35084196 gcaatttgcatttaattttactttggaaaggatgatttttatgaagaaacataataat 35084253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 28608560 - 28608469
Alignment:
Q  255 aatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||||| |||| || || |||||||| || |||||||||| || || ||||  || || ||||||||||||||| ||| ||||||||||    
T  28608560 aatttataagaaaaa-aatacaaattcacattttttaagaaaacaaaaacatagtagttagaagtataattttttatggtcttcttgaaataa 28608469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 30777681 - 30777581
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  30777681 tccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacaattagtgatttgaggtataattttttgtgttctccttgaaata 30777582  T
Q  347 a 347  Q
    |    
T  30777581 a 30777581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 29180339 - 29180438
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  29180339 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 29180437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 30776411 - 30776510
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  30776411 tccgtcctaatttataagcaaaaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 30776509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 39969916 - 39970015
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  39969916 tccgtcctaatttataagcaaaa-aacagtaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 39970014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 43980691 - 43980592
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  43980691 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacatttagtgatttgaggtataaatttttgtgttctccttgaaata 43980593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 3043094 - 3043193
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  3043094 tccgtcctaatttataagtaaaa-aacactaattcacacttattaagaaaactaacacttagtgagttgaggtataattttttgtgtactccttgaaata 3043192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 10591430 - 10591529
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  10591430 tccgtcctaatttataagcaaaa-aacagtaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctccttggaata 10591528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 55937630 - 55937729
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  55937630 tccgtcctaatttataagtaaaa-aacactaattcatacttattaagaaaactaacacttagtgatttgaggtataagtttttgtgttctccttgaaata 55937728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 249 - 347
Target Start/End: Original strand, 9798004 - 9798101
Alignment:
Q  249 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  9798004 cgtcctaatttataagcaaaa-aacactaattcacatttattaagaaaactaacatttagtgatttgaggtataattttttgcgttctccttgaaataa 9798101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 53677406 - 53677499
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttg 341  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  53677406 tccgtcctaatttataagtaaaa-aacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 53677499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 340
Target Start/End: Complemental strand, 28681852 - 28681760
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  28681852 tccgtcctaatttataagcaaaa-aatactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcctt 28681760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 29899908 - 29899809
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  29899908 tccgtcctaatttataagtaaaa-aacactaattcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctccttggaata 29899810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 37788640 - 37788545
Alignment:
Q  251 tcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  37788640 tcctaatttataagcaaaa-aatattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 37788545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 49902214 - 49902132
Alignment:
Q  253 ctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttct 336  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49902214 ctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttatgttct 49902132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 38187655 - 38187736
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 329  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38187655 tccgtcctaatttataagctaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 38187736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 255 - 340
Target Start/End: Original strand, 32012261 - 32012346
Alignment:
Q  255 aatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  32012261 aatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcctt 32012346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 50768638 - 50768539
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| |||| |||||| ||||    
T  50768638 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaatacttagtgattcgagatataattttttgtgttttccttggaata 50768540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 47807387 - 47807289
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||| ||| ||||    
T  47807387 tccgtcctaatttataagcaaaa--acactaattcacacttattaagaaaattaatccttagtgatttgaggtataattttttgtgttctctttggaata 47807290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 38941038 - 38940963
Alignment:
Q  272 acactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  38941038 acactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataa 38940963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 337
Target Start/End: Complemental strand, 51495341 - 51495253
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctc 337  Q
    |||||||||||||||||| ||||  ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  51495341 tccgtcctaatttataagaaaaa--acactaattcacagttattaagaaaattaacacttaatgatttgaggtataattttttgtgttctc 51495253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 32012430 - 32012493
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  32012430 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcata 32012493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 5222227 - 5222319
Alignment:
Q  255 aatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||| || |  ||||||||||||||||||||||||| || |||| ||||||| ||||||||||| |||||| ||||||||||    
T  5222227 aatttataagcaaaaaaatataaattcacacttattaagaaaactaatacatagtaatttgagttataattttttgtgttcttcttgaaataa 5222319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 340
Target Start/End: Complemental strand, 1620217 - 1620130
Alignment:
Q  253 ctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||  ||| ||||||||||||||| ||| ||||||| ||||||||||    
T  1620217 ctaatttataaacaaaaaaacactaattcacacttattaaggaagttaatacttagtgatttgagatatcattttttgtgttctcctt 1620130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 3043270 - 3043333
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  3043270 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 3043333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 10591606 - 10591669
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  10591606 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 10591669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 38940886 - 38940823
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  38940886 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 38940823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 49902044 - 49901981
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  49902044 gcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacataataataacata 49901981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 52713080 - 52713017
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  52713080 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 52713017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 53677582 - 53677645
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  53677582 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 53677645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 425 - 487
Target Start/End: Original strand, 9798179 - 9798241
Alignment:
Q  425 caatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  9798179 caatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 9798241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 1620046 - 1619983
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  1620046 gcaaattgcatttaattttacattgaaaaagatgatttgtttgaaaaaatataataatagcata 1619983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 29180515 - 29180578
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||    
T  29180515 gcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacataataataacata 29180578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 30776587 - 30776650
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||    
T  30776587 gcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacataataataacata 30776650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 30777504 - 30777441
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||    
T  30777504 gcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacataataataacata 30777441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 39970092 - 39970155
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||| ||||    
T  39970092 gcaatttgcatttaattttacattggaaaagatgatttggttgaaaaaacataataatagcata 39970155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 43980515 - 43980452
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||| ||||    
T  43980515 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaatataataatagcata 43980452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 29899732 - 29899669
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  29899732 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 29899669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 37788468 - 37788405
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  37788468 gcaagttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 37788405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 479
Target Start/End: Complemental strand, 47807212 - 47807157
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataata 479  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  47807212 gcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaacataata 47807157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 50768462 - 50768399
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  50768462 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 50768399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 479
Target Start/End: Complemental strand, 51495166 - 51495111
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataata 479  Q
    ||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  51495166 gcaatttgcatttaattttacattggaaaagatgatttgtttaaaaaaacataata 51495111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 429 - 487
Target Start/End: Original strand, 55937811 - 55937869
Alignment:
Q  429 ttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  55937811 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatatcata 55937869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 27750451 - 27750514
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||| ||||||| |||| ||||    
T  27750451 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaataacataaaaatagcata 27750514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 38187829 - 38187892
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||| ||||| ||||| ||||    
T  38187829 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaatacatactaatagcata 38187892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 52713220 - 52713149
Alignment:
Q  276 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||| | |||||||||||||||| |||||||||||||| |||||||||||| |||| | |||| |||||    
T  52713220 taattcatatttattaagaaaactaatacttagtgatttgaagtataattttttgtgtttttcttggaataa 52713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 17236262 - 17236322
Alignment:
Q  287 tattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||| || || |  |||||||||||||||||| |||||| ||||||||||    
T  17236262 tattaagaaaactaaaacataatagtttgaggtataattttttgtgttcttcttgaaataa 17236322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 30011884 - 30011967
Alignment:
Q  251 tcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgtt 334  Q
    |||||||| |||||||||| || || | ||||||||||||||||||  ||| |  | || ||||||||||||||||||| ||||    
T  30011884 tcctaattcataagcaaaaaaatacaatttcacacttattaagaaagttaaaatattgtaatttgaggtataattttttgtgtt 30011967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 47868077 - 47868024
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaa 301  Q
    |||||||||| |||||||||||| ||||  ||| |||||||||||||||||||||    
T  47868077 tccgtcctaaattataagcaaaaaaacaaaaat-cacacttattaagaaaactaa 47868024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 27750313 - 27750361
Alignment:
Q  286 ttattaagaaaactaacacttagtgatttgaggtataattttttatgtt 334  Q
    |||||||||||| ||||| ||||||||||||| ||| ||||||| ||||    
T  27750313 ttattaagaaaattaacatttagtgatttgagatatgattttttgtgtt 27750361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 21654442 - 21654343
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21654442 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaata 21654344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 246 - 347
Target Start/End: Complemental strand, 46580733 - 46580633
Alignment:
Q  246 ttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaat 345  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  46580733 ttccgttctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaat 46580635  T
Q  346 aa 347  Q
    ||    
T  46580634 aa 46580633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 249 - 347
Target Start/End: Complemental strand, 34022794 - 34022697
Alignment:
Q  249 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  34022794 cgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctccttgaaataa 34022697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 31126402 - 31126310
Alignment:
Q  254 taatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31126402 taatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataa 31126310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 26641035 - 26641134
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  26641035 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaata 26641133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 32322162 - 32322261
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  32322162 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaata 32322260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 55400935 - 55400836
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  55400935 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctctttggaata 55400837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 37324006 - 37324105
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||    
T  37324006 tccgttctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttatctttgaaata 37324104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 53020380 - 53020281
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||| ||||    
T  53020380 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacatttagtgatttgagttataattttttgtgttcttcttggaata 53020282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 45347632 - 45347735
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttga 342  Q
    |||| ||||||||||||||||| |||| |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||     
T  45347632 tcctaccgtcctaatttataagtaaaa-aacactaattcatatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttgg 45347730  T
Q  343 aataa 347  Q
    |||||    
T  45347731 aataa 45347735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 49068248 - 49068157
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcct 339  Q
    ||||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  49068248 tccgtcctaatttataagcaaaa-aatattaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 49068157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 46295999 - 46296099
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataa-ttttttatgttctccttgaaat 345  Q
    |||||||||||||||||| |||| || |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||| |||    
T  46295999 tccgtcctaatttataagtaaaa-aatactaattcacacttattaagaaaactaacggttagtgatttgaggtataatttttttgtgttctccttggaat 46296097  T
Q  346 aa 347  Q
    ||    
T  46296098 aa 46296099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 51426816 - 51426728
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttct 336  Q
    ||||||||||||||||||||||| |||||||||| || |||||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  51426816 tccgtcctaatttataagcaaaa-aacactaatttacgcttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttct 51426728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 247 - 327
Target Start/End: Complemental strand, 23514639 - 23514559
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttt 327  Q
    |||||| |||||||||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  23514639 tccgtcttaatttataagcaaaaaaacattaattcacatttattaagaaaactaacacttattgatttgaggtataatttt 23514559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 1335131 - 1335068
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1335131 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataataacata 1335068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 28793331 - 28793260
Alignment:
Q  276 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  28793331 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttatccttggaataa 28793260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 46820229 - 46820143
Alignment:
Q  249 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttct 336  Q
    |||||||||||||||| |||| | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  46820229 cgtcctaatttataagtaaaa-accactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttct 46820143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 13541430 - 13541349
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 329  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  13541430 tccgttctaatttataaccaaaa-aacactaattcacacttattaagaaaattaacacttagtaatttgaggtataatttttt 13541349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 243 - 340
Target Start/End: Complemental strand, 43576158 - 43576062
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||| || ||||||||||  |||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  43576158 tccttccatcataatttataactaaaa-aacactaattcatacttattaagaaaattaacacttagtgatttgaggtatgattttttgtgttctcctt 43576062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 243 - 347
Target Start/End: Complemental strand, 51255387 - 51255284
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttga 342  Q
    ||||||||||||||||||||||||||| || | ||||||| | ||||||||||||||||||| |||| || ||| |||||||||||| ||||||||| ||    
T  51255387 tccttccgtcctaatttataagcaaaa-aatattaattcatatttattaagaaaactaacacgtagtaatatgaagtataattttttgtgttctcctaga 51255289  T
Q  343 aataa 347  Q
    |||||    
T  51255288 aataa 51255284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 46580557 - 46580500
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataat 481  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46580557 gcaatttgcatttaattttacattgtaaaatatgatttgtttgaaaaaacataataat 46580500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 16739088 - 16739182
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||     | |||||||||||||||| || ||||||||||| ||||    
T  16739088 tccgtcctaatttataagccaaa-aacactaattcacacttattaagaaaactaaca-----ttatttgaggtataatttgttgtgttctccttggaata 16739181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 347
Target Start/End: Complemental strand, 51309615 - 51309511
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttga 342  Q
    ||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||  || || ||||  |||||||||||||||||| |||||| ||||     
T  51309615 tccttccgtcccaatttataagcaaaaaaacacaaattcacatttattaagaaaataaaaacatagtagtttgaggtataattttttgtgttcttcttgg 51309516  T
Q  343 aataa 347  Q
    |||||    
T  51309515 aataa 51309511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 13541298 - 13541235
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  13541298 gcaatttgcatttaattttacattggaaaagatgatttgttcgaaaaaacataataataacata 13541235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 23513588 - 23513525
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23513588 gcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataatagcata 23513525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 26641211 - 26641274
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  26641211 gcaatttgcatttaattttaccttgaaaaagatgatttgtttgaaaaaacataataatagcata 26641274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 55400759 - 55400696
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  55400759 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 55400696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 1335297 - 1335208
Alignment:
Q  257 tttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||| |||| |||| |||||||||||||||||||||||||| |||||||| |||||| ||| ||||||| ||||||||||| |||||    
T  1335297 tttataagaaaaa-aacattaattcacacttattaagaaaactaatacttagtgttttgagatattattttttgtgttctccttggaataa 1335208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 424 - 478
Target Start/End: Complemental strand, 49068072 - 49068018
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataat 478  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49068072 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataat 49068018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 31126233 - 31126176
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataat 481  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  31126233 gcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacataataat 31126176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 21654266 - 21654202
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaa-aaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  21654266 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataataacata 21654202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 36188937 - 36189028
Alignment:
Q  255 aatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||| ||||| |||||||||||||||||||| |||| ||  ||| |||||||||||| |||||| | |||||||||||||||    
T  36188937 aatttataagcaaaa-aacacaaattcacacttattaagaaatctaaaacacagtaatttgaggtatagttttttgtattctccttgaaataa 36189028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 53020204 - 53020140
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaa-aaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  53020204 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaaacataataatagcata 53020140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 52252230 - 52252134
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| |||| || | ||||||| |||||   ||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||    
T  52252230 tccgtcctaatttataagtaaaa-aatattaattcatactta---agaaaactaacacttagtgatttgaagtataattttttgtgttcttcttggaata 52252135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 424 - 472
Target Start/End: Original strand, 37324183 - 37324231
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  37324183 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 37324231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 424 - 472
Target Start/End: Original strand, 52172109 - 52172157
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  52172109 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaa 52172157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 429 - 477
Target Start/End: Complemental strand, 52252052 - 52252004
Alignment:
Q  429 ttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  52252052 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 52252004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 32322338 - 32322401
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| ||| ||||||||||||||||||||| || |||||||||||||||||||| |||| ||||    
T  32322338 gcaacttgtatttaattttacattgaaaaagataatttgtttgaaaaaacataaaaatagcata 32322401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 45781418 - 45781355
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| ||| |||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  45781418 gcaacttgaatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 45781355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 46296176 - 46296239
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||| | |||| ||||||||||||||||||||||| |||| ||||    
T  46296176 gcaacttgcatttaattttacatcggaaaagatgatttgtttgaaaaaacataaaaatagcata 46296239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 46820070 - 46820007
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||| ||||||||||| |||| ||||    
T  46820070 gcaacttgcatttaattttacattggaaaagatgatttgtttaaaaaaacataaaaatagcata 46820007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 433 - 487
Target Start/End: Original strand, 16739263 - 16739317
Alignment:
Q  433 atttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||| ||||    
T  16739263 atttaattttacattggaaaagatgatttgtttgaaaaaatataataatagcata 16739317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 477
Target Start/End: Complemental strand, 51255207 - 51255154
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    |||| ||||||||||||||| |||| |||| |||||||||||||||||||||||    
T  51255207 gcaacttgcatttaattttagattggaaaagatgatttgtttgaaaaaacataa 51255154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 36189105 - 36189169
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtt-tgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||| ||| |||| | ||||| || |||||||||||||||||||||||    
T  36189105 gcaatttgcatttaattttactttggaaaagaagattttttgtgaaaaaacataataataacata 36189169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 45781549 - 45781505
Alignment:
Q  293 gaaaactaacacttagtgatttgaggtataattttttatgttctc 337  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  45781549 gaaaactaacacttagtgatttgatgtataattttttgtgttctc 45781505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 487
Target Start/End: Complemental strand, 51426638 - 51426575
Alignment:
Q  426 aatttgcatttaattttacattgaaaaatatgatttgtttgaa--aaaacataataataacata 487  Q
    ||||||||||||||||||||||  |||| ||||||||||||||  ||||||||| |||||||||    
T  51426638 aatttgcatttaattttacattagaaaagatgatttgtttgaaaaaaaacataagaataacata 51426575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 30612368 - 30612286
Alignment:
Q  255 aatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctc 337  Q
    |||||||||  |||| || || |||||||||||||||||||||| || |  |||| |||| || |||||||||||||||||||    
T  30612368 aatttataaaaaaaaaaatacaaattcacacttattaagaaaacaaaaatatagtaatttaagatataattttttatgttctc 30612286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 28793183 - 28793119
Alignment:
Q  424 gcaatttgcatttaatttt-acattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||| |||||  |||| ||||||||||||||||||||||| |||| ||||    
T  28793183 gcaacttgcatttaatttttacattagaaaagatgatttgtttgaaaaaacataaaaatagcata 28793119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 471
Target Start/End: Complemental strand, 43575978 - 43575931
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaa 471  Q
    |||| |||||||||||||||||||  |||| |||||||||||||||||    
T  43575978 gcaacttgcatttaattttacattagaaaagatgatttgtttgaaaaa 43575931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 54464815 - 54464902
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgtt 334  Q
    |||||||||| |||||||||||| || |  || ||||| |||||||||||||||| || ||   |||||| |||||||||||| ||||    
T  54464815 tccgtcctaaattataagcaaaaaaaaaaaaaatcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgtt 54464902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 249 - 347
Target Start/End: Complemental strand, 35344565 - 35344467
Alignment:
Q  249 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35344565 cgtcctaatttataagcaaaaaaactctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataa 35344467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 44411167 - 44411270
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttga 342  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  44411167 tccttccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctccttga 44411265  T
Q  343 aataa 347  Q
    |||||    
T  44411266 aataa 44411270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 11044256 - 11044157
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11044256 tccgttctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 11044158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 27752785 - 27752686
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  27752785 tccgtcctgatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 27752687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 35260256 - 35260157
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  35260256 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtatcattttttgtgttctccttggaata 35260158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 11992927 - 11992828
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11992927 tccgtcctaatttataagtaaaa-aacactaattcacactaattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 11992829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 27621329 - 27621230
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||    
T  27621329 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctacttggaata 27621231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 37598268 - 37598169
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  37598268 tccgtcctaatttataagcaaaa-aacactaattcacggttattaagaaaactaacacttactgatttgaggtataattttttgtgttctccttgaaata 37598170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 31132993 - 31133090
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  31132993 tccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 31133089  T

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Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 253 - 347
Target Start/End: Original strand, 24612445 - 24612541
Alignment:
Q  253 ctaatttataagcaaaataa--cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24612445 ctaatttataagcaaaaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttatgttctccttggaataa 24612541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 3100152 - 3100053
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||||    
T  3100152 tccgtcttaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcgttggaata 3100054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 44052816 - 44052721
Alignment:
Q  251 tcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  44052816 tcctaatttataagcaaaa-aatactaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctccttggaataa 44052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 25321548 - 25321647
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| || |||||||||||||||||||| | ||||||||||| ||||    
T  25321548 tccgtcctaatttataagcaaaa-aacactaattcacacttatttagaaaactaacatttggtgatttgaggtataattttctgtgttctccttggaata 25321646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 35346263 - 35346365
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttga 342  Q
    |||||||||||||||||||||| ||||  || |||||||||| |||||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||    
T  35346263 tccttccgtcctaatttataagaaaaa--actctaattcacatttattaagaaaattaatatttagtgatttgaggtataattttttgtgttctccttga 35346360  T
Q  343 aataa 347  Q
    |||||    
T  35346361 aataa 35346365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 247 - 326
Target Start/End: Complemental strand, 39187429 - 39187351
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattt 326  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39187429 tccgtcataatttataagcaaaa-aacactaattcacgcttattaagaaaactaacacttagtgatttgaggtataattt 39187351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 34713727 - 34713628
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||| ||||||| |||| || ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| | |||||||||    
T  34713727 tccgtcctaagttataagtaaaa-aatactaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgtttttcttgaaata 34713629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 32678479 - 32678544
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgat 312  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  32678479 tccgtcctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgat 32678544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 36538239 - 36538168
Alignment:
Q  266 aaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctc 337  Q
    |||| |||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  36538239 aaaaaaacactaattcacatttattaagaaaactaacatttagtgatttgaggaataattttttatgttctc 36538168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 12108355 - 12108255
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| |||||||||||| |||| || | |||||| ||||||||||||||||||||| ||||| |||||| |||||||||||| |||| || ||||||||    
T  12108355 tccgttctaatttataagaaaaaaaatattaattctcacttattaagaaaactaacatttagtaatttgaagtataattttttgtgttatctttgaaata 12108256  T
Q  347 a 347  Q
    |    
T  12108255 a 12108255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 24612618 - 24612681
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  24612618 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcata 24612681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 27621153 - 27621090
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  27621153 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 27621090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 32678647 - 32678710
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  32678647 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacata 32678710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 35346442 - 35346505
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  35346442 gcaatttgcattcaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcata 35346505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 37598093 - 37598030
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  37598093 gcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacataataacaacata 37598030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 44358629 - 44358692
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  44358629 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacgtaataataacata 44358692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 44411347 - 44411410
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  44411347 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaatataataatagcata 44411410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 426 - 487
Target Start/End: Complemental strand, 35260078 - 35260017
Alignment:
Q  426 aatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  35260078 aatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 35260017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 35344390 - 35344326
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaata-tgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  35344390 gcaatttgcatttaattttacattgaaaaaaaatgatttgtttgaaaaaacataataatagcata 35344326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 44052644 - 44052580
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaa-aaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  44052644 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataataacata 44052580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 11044080 - 11044017
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  11044080 gcaacttgcatttaattttacattggaaaatatgatttatttgaaaaaacataataatagcata 11044017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 37567569 - 37567632
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| ||||    
T  37567569 gcaatttgcatttaattttacattggaaaagatgatttgtctgaaaaaacataataatagcata 37567632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 39187256 - 39187193
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||| ||||    
T  39187256 gcaatttgcatttaattttacattggaaatgatgatttgtttgaaaaaacataataatagcata 39187193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 37566459 - 37566519
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttag 308  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  37566459 tccgtcctaatttataagcaaaa-aacactaattcacacttattaaaaaaactaatacttag 37566519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 3099976 - 3099912
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaa-aaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||    
T  3099976 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcata 3099912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 11992751 - 11992687
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaa-aaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||    
T  11992751 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcata 11992687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 424 - 476
Target Start/End: Original strand, 31133167 - 31133219
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacata 476  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  31133167 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 31133219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 25321724 - 25321787
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  25321724 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 25321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 27752609 - 27752546
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  27752609 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 27752546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 33851161 - 33851224
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  33851161 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 33851224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 36538081 - 36538018
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  36538081 gcaaattgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 36538018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 12108192 - 12108136
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataat 481  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||    
T  12108192 gcaatttgcattgaattttacattgaaaaa-atgatttgtttgaaaaaatataataat 12108136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 2238565 - 2238636
Alignment:
Q  255 aatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttt 327  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| || || ||||  ||||||||||||||||    
T  2238565 aatttataagcaaaa-aacacaaattcacacttattaagaaaacaaaaacatagtagtttgaggtataatttt 2238636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 40487803 - 40487860
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataata 482  Q
    |||| ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||    
T  40487803 gcaacttgcattgaattttacattggaaaagatgatttgtttg-aaaaacataataata 40487860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 24510667 - 24510738
Alignment:
Q  255 aatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttt 327  Q
    ||||||||||||||| ||||  |||||||||||||||| ||||| || || ||||  ||||||||||||||||    
T  24510667 aatttataagcaaaa-aacataaattcacacttattaataaaacaaaaacatagtagtttgaggtataatttt 24510738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 34713551 - 34713511
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtt 464  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  34713551 gcaatttgcatttaattttacattggaaaagatgatttgtt 34713511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 41426538 - 41426439
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||| ||||||||||||||| ||||  |||||||| ||||| | ||||| || || ||||  ||| |||||||||||||| |||||| |||| ||||    
T  41426538 tccgtcccaatttataagcaaaa-aacaaaaattcacatttattgaaaaaacaaaaacatagtagtttaaggtataattttttgtgttcttcttggaata 41426440  T

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Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 37567449 - 37567492
Alignment:
Q  304 cttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||    
T  37567449 cttagtgatttgaggtataattttttgtgttctctttggaataa 37567492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 340
Target Start/End: Original strand, 40486505 - 40486546
Alignment:
Q  299 taacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||| ||||||||||||||||||||| | ||||||||    
T  40486505 taacacttaatgatttgaggtataattttttgtattctcctt 40486546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 41426362 - 41426325
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgattt 461  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  41426362 gcaatttgcatttaattttactttgaaaaagatgattt 41426325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 44358508 - 44358545
Alignment:
Q  303 acttagtgatttgaggtataattttttatgttctcctt 340  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  44358508 acttagtgattttaggtataattttttgtgttctcctt 44358545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 4826 - 4727
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  4826 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctccttgaaata 4728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 4650 - 4588
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||| |||| |||  |||||||||||| ||||||||||||||| ||||    
T  4650 gcaatttgcatttaattttatattggaaag-atgatttgtttggaaaaacataataatagcata 4588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 10228108 - 10228009
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  10228108 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctccttgaaata 10228010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 5121417 - 5121516
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||    
T  5121417 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttaatgatttgaggtatagttttttgtgttctccttaaaata 5121515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 17721770 - 17721869
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  17721770 tccgtcctaatttataagcaaaa-aacattaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctccttggaata 17721868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 249 - 347
Target Start/End: Complemental strand, 30766640 - 30766543
Alignment:
Q  249 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  30766640 cgtcctaatttataagcaaaa-aatactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaataa 30766543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 30949327 - 30949232
Alignment:
Q  251 tcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  30949327 tcctaatttataagcaaaa-aatactaattcacacttattaacaaaactaacatttattgatttgaggtataattttttgtgttctccttgaaataa 30949232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 249 - 340
Target Start/End: Complemental strand, 12278900 - 12278810
Alignment:
Q  249 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12278900 cgtcttaatttataagcaaaa-aacatcaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 12278810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 247 - 340
Target Start/End: Complemental strand, 374295 - 374203
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  374295 tccgtcctaatttataagcaaaa-aacactaattcacatttattaaaaaaactaatacttagttatttgaggtataattttttgtgttctcctt 374203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 33756276 - 33756213
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  33756276 gcaatttgcatttaattttacattgaaaaaaatgatttgtttgaaaaaacataataatagcata 33756213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 374119 - 374056
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  374119 gcaatttgcatttaattttacatcggaaaatatgatttgtttgaaaaaacataataatagcata 374056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 12278726 - 12278663
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  12278726 gcaatttgcatttaattttacatttgaaaaaatgatttgtttgaaaaaacataataataacata 12278663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 17598313 - 17598250
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  17598313 gcaatttgcatttaattttacattggaaaagaagatttgtttgaaaaaacataataataacata 17598250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 17721946 - 17722009
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  17721946 gcaatttgcatttaattttacattggaaaatatgatttctttgaaaaaacataataatagcata 17722009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 30766466 - 30766403
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||    
T  30766466 gcaatttgcatttaattttacattgaaaaaaataatttctttgaaaaaacataataataacata 30766403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 31887081 - 31887168
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgtt 334  Q
    ||||| ||||||||||||||||| |||| ||||| ||||||||||| |||||||||||| ||||||||||  ||| ||||||| ||||    
T  31887081 tccgttctaatttataagcaaaaaaacattaatttacacttattaataaaactaacactcagtgatttgatatatgattttttgtgtt 31887168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 10227932 - 10227869
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||| |||| |||| |||||||||||| ||||||||||||||| ||||    
T  10227932 gcaatttgcatttaattttatattggaaaagatgatttgtttggaaaaacataataatagcata 10227869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 30949155 - 30949092
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  30949155 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 30949092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 17598450 - 17598390
Alignment:
Q  287 tattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||| |||||    
T  17598450 tattaagaaaattaacacttaatgatttgaggtataattttttgtgttctctttggaataa 17598390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 21964145 - 21964054
Alignment:
Q  255 aatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||| ||  | |||||||||||| ||| |||||||| || |||| ||| ||| ||||||||||| |||||||||| ||||||    
T  21964145 aatttataagcaaaaaaatcc-aattcacacttactaataaaactaaaacatagtaattagagatataattttttgtgttctccttaaaataa 21964054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 472
Target Start/End: Original strand, 31887258 - 31887306
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  31887258 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 31887306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 17599508 - 17599464
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaa 292  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||    
T  17599508 tccgtcctaatttataagcaaaa-aacattaattcacacttattaa 17599464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 32882660 - 32882740
Alignment:
Q  255 aatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttct 336  Q
    ||||||||||||||| ||  | |||||||||||||||||||||| || || | ||  |||||||||||||||||| ||||||    
T  32882660 aatttataagcaaaa-aattcaaattcacacttattaagaaaacaaaaacattgtagtttgaggtataattttttgtgttct 32882740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 33756396 - 33756357
Alignment:
Q  304 cttagtgatttgaggtataattttttatgttctccttgaa 343  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  33756396 cttagtgatttgaggtattattttttttgttctccttgaa 33756357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 7274836 - 7274889
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaa 301  Q
    |||||||||| |||||||||||| ||||  ||| |||||||||||||||||||||    
T  7274836 tccgtcctaaattataagcaaaaaaacaaaaat-cacacttattaagaaaactaa 7274889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 470
Target Start/End: Complemental strand, 16655217 - 16655172
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaa 470  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||    
T  16655217 gcaatttgcatttaatttctcattgaaaaatatgattt-tttgaaaa 16655172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 3e-40; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 792316 - 792415
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  792316 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 792414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 21539953 - 21539854
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  21539953 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 21539855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 14565333 - 14565432
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  14565333 tccgtcctaatttataagcaaaa-aacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 14565431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 35832604 - 35832509
Alignment:
Q  251 tcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  35832604 tcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 35832509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 4092207 - 4092108
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  4092207 tccgttctaatttataagcaaaa-aacactacttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 4092109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 10478374 - 10478275
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  10478374 tccgtcctaatttataagcaaaa-aacattaattcacacttattaagaaaactaacacttagtgagttgagatataattttttgtgttctccttgaaata 10478276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 10979365 - 10979266
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  10979365 tccgtcctaatttataagcaaaa-aacactaattcacactcattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttggaata 10979267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 15858649 - 15858744
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaa 343  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  15858649 tccgtcctaatttataagcaaaa-aacactaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctccttgaa 15858744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 43075945 - 43075847
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43075945 tccgtcctaatttataagcaaaa-aatactaattcacacttattaagaaaactaacacttagtgatttgaggtgtaa-tttttatgttctccttgaaata 43075848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 253 - 347
Target Start/End: Original strand, 38549609 - 38549702
Alignment:
Q  253 ctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  38549609 ctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattctccttggaataa 38549702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 8784585 - 8784492
Alignment:
Q  254 taatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  8784585 taatttataagcaaaaaaacattaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttgaaataa 8784492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 38071410 - 38071502
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  38071410 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctcctt 38071502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 44804094 - 44803995
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  44804094 tccgtcctaatttataagcaaac-aacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaata 44803996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 29513980 - 29514071
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  29513980 tccgtcctaatttataagcaaaa-aacagtaattcacacttattaagaaaa-taacacttagtaatttgaggtataattttttgtgttctcctt 29514071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 247 - 340
Target Start/End: Complemental strand, 43451701 - 43451609
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  43451701 tccgtcctaatttataagcaaaa-aatactaattcatacttattaagaaaactaacatttagtgatttgaggtatgattttttgtgttctcctt 43451609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 28492712 - 28492617
Alignment:
Q  251 tcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||    
T  28492712 tcctaatttataagcaaaa-agcactaaatcacacttattaagaaaactaacacttaatgatttgagatataattttttgtgttctccttggaataa 28492617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 33635532 - 33635433
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| |||| | |||| ||||    
T  33635532 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaatatttagtgatttgagatataattttttgtgtttttcttggaata 33635434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 5091507 - 5091588
Alignment:
Q  254 taatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttct 336  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5091507 taatttataagcaaaa-aatactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttct 5091588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 29514435 - 29514527
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||| |||| |||||    
T  29514435 tccgtcctaatttataagcaaaa-aacagtaattcatacttattaaaaaaactaacacttagtaatttgaggtataattttttgtgttatcctt 29514527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 38564677 - 38564756
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttt 327  Q
    ||||||||||||||||| ||||| |||  |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38564677 tccgtcctaatttataaacaaaa-aacgataattcacacttattaagaaaactaacatttagtgatttgaggtataatttt 38564756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 28424469 - 28424368
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgag--gtataattttttatgttctccttgaaa 344  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||  ||| ||  |||| ||||||||||| ||    
T  28424469 tccgtcctaatttataagcaaaa-aacactaattgatacttattaagaaaactaacacttagtgatttgagatgtaaaaaattttgtgttctccttggaa 28424371  T
Q  345 taa 347  Q
    |||    
T  28424370 taa 28424368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 792492 - 792555
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  792492 gcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaacataataataacata 792555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 4033811 - 4033874
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  4033811 gcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataatagcata 4033874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 8784415 - 8784352
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  8784415 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaataacataataatagcata 8784352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 21539777 - 21539714
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  21539777 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacata 21539714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 29514155 - 29514218
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  29514155 gcaatttgcatttaattttacattaaaaaagatgatttgtttgaaaaaacataataatagcata 29514218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 425 - 487
Target Start/End: Complemental strand, 28424293 - 28424231
Alignment:
Q  425 caatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  28424293 caatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 28424231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 424 - 492
Target Start/End: Original strand, 15858746 - 15858814
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacatataatt 492  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||| ||||    
T  15858746 gcaatttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaatt 15858814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 22162340 - 22162277
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||| ||||    
T  22162340 gcaatttgcatttaattttacattggaaaagattatttgtttgaaaaaacataataatagcata 22162277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 28492540 - 28492477
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||| ||||    
T  28492540 gcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaatataataatagcata 28492477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 35832432 - 35832369
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||    
T  35832432 gcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacataataatagcata 35832369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 43075770 - 43075707
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| ||||    
T  43075770 gcaatttgcatttaattttacattggaatagatgatttgtttgaaaaaacataataatagcata 43075707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 4033678 - 4033734
Alignment:
Q  291 aagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  4033678 aagaaaactaacacttaatgatttgaggtataattttttgtgttctccttaaaataa 4033734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 424 - 472
Target Start/End: Original strand, 5091676 - 5091724
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5091676 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaa 5091724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 18833869 - 18833969
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| || || | |||||||||||||||||| |||| |  | || ||||||||||||||||||| |||| | |||| ||||    
T  18833869 tccgtcctaatttataagcaaaaaaatacaatttcacacttattaagaaagctaaaatattgtaatttgaggtataattttttgtgttattcttggaata 18833968  T
Q  347 a 347  Q
    |    
T  18833969 a 18833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 29514611 - 29514674
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||    
T  29514611 gcaatttacatttaattttacattgggaaagatgatttgtttgaaaaaacataataatagcata 29514674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 38549779 - 38549842
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||    
T  38549779 gcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcata 38549842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 477
Target Start/End: Complemental strand, 43451525 - 43451472
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  43451525 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaataacataa 43451472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 14565509 - 14565573
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttg-aaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||||||| ||||    
T  14565509 gcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaaacataataatagcata 14565573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 15068932 - 15068832
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||| ||||||||||||||| ||||  || ||||||||||||||||||| || ||  |||  |||||||||| ||||||| |||||| |||| ||||    
T  15068932 tccgtcccaatttataagcaaaaaaacataaaatcacacttattaagaaaacaaaaacagagtagtttgaggtatgattttttgtgttcttcttggaata 15068833  T
Q  347 a 347  Q
    |    
T  15068832 a 15068832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 9294675 - 9294612
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||| |||||||| ||||||| | ||||| |||||||||| ||||||    
T  9294675 gcaatttgcatttaattttactttgaaaaagatgatttttatgaaataacataataagaacata 9294612  T

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Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 33635356 - 33635293
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||  |||| ||||||||||||||||||||||| |||| ||||    
T  33635356 gcaacttgcatttaattttacattagaaaagatgatttgtttgaaaaaacataaaaatagcata 33635293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 472
Target Start/End: Complemental strand, 4092031 - 4091983
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||    
T  4092031 gcaacttgcatttaattttacattgaaaaagatgatttatttgaaaaaa 4091983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 44803918 - 44803856
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||| |||||||||||||||| |||| ||||||| ||| |||||| ||||||||||||||    
T  44803918 gcaatttgtatttaattttacattggaaaagatgatttattt-aaaaaatataataataacata 44803856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 472
Target Start/End: Complemental strand, 10478198 - 10478150
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    |||| |||||||||||||||||||| |||| || |||||||||||||||    
T  10478198 gcaacttgcatttaattttacattggaaaagatcatttgtttgaaaaaa 10478150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 13822729 - 13822818
Alignment:
Q  249 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacac---ttagtgatttgaggtataattttttatgttct 336  Q
    ||||| ||||||||||||||| || || |||||||||||||||||||||| || ||    ||||  |||||||||||||||||| ||||||    
T  13822729 cgtcccaatttataagcaaaa-aatacaaattcacacttattaagaaaacaaaaacatactagtattttgaggtataattttttgtgttct 13822818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 471
Target Start/End: Original strand, 38071574 - 38071621
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaa 471  Q
    |||||||| || ||||||||||||| |||| |||||||||||||||||    
T  38071574 gcaatttgtatataattttacattggaaaagatgatttgtttgaaaaa 38071621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 9294849 - 9294752
Alignment:
Q  250 gtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||| | |||| ||||  ||||| || |||||||||||||||| |  ||||  ||||| |||||||||||| | || | ||||||||||    
T  9294849 gtcctaatttataggaaaaaaaacatcaattcgcatttattaagaaaactaaaagatagtagtttgaagtataattttttgtatttttcttgaaataa 9294752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 13822906 - 13822959
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    ||||||||||||||||||||| |||||||| || |||| ||| ||| |||||||    
T  13822906 gcaatttgcatttaattttactttgaaaaagattatttttttaaaataacataa 13822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 35517321 - 35517270
Alignment:
Q  249 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaa 301  Q
    |||||||| |||||||||||| ||||  ||| |||||||||||||||||||||    
T  35517321 cgtcctaaattataagcaaaaaaacaaaaat-cacacttattaagaaaactaa 35517270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 23873791 - 23873890
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  23873791 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 23873889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 18913308 - 18913400
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcct 339  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  18913308 tccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 18913400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 43656001 - 43656100
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43656001 tccgtcctaatttaaaagcaaaa-aacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaata 43656099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 18852419 - 18852320
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  18852419 tccgttctaatttataagcaaaa-aacactaattcacacttattaagaaagctaacagttagtgatttgaggtataattttttgtgttctccttgaaata 18852321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 26907055 - 26907154
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| ||||    
T  26907055 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtgttctccttggaata 26907153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 35942037 - 35941938
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || |||||||||||||    
T  35942037 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttaattatttgaggtataattttttgtgctctccttgaaata 35941939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 38942404 - 38942504
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  38942404 tccgttctattttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 38942503  T
Q  347 a 347  Q
    |    
T  38942504 a 38942504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 39026209 - 39026309
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||||    
T  39026209 tccgtcctaatttataagcaaaaaaacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttcttcttgaaata 39026308  T
Q  347 a 347  Q
    |    
T  39026309 a 39026309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 40960434 - 40960537
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttga 342  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| |||||||||||     
T  40960434 tccttccgtcctaatttataagcaaaa-aacactaattcacatttattaagaaaactaacacttagtgatttgaggcatgattttttgtgttctccttgg 40960532  T
Q  343 aataa 347  Q
    |||||    
T  40960533 aataa 40960537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 46949517 - 46949418
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  46949517 tccgtcctaatttataagcaaaa-aacactaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaata 46949419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 49924615 - 49924516
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  49924615 tccgtcctaatttataagtaaaa-aacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttgaaata 49924517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 35189398 - 35189298
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaa-ctaacacttagtgatttgaggtataattttttatgttctccttgaaat 345  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  35189398 tccgtcctaatttataagcaaaa-aacactaattcacatttattaagaaaaactaacacttagtaatttgaggtataattttttatgttcttcttgaaat 35189300  T
Q  346 aa 347  Q
    ||    
T  35189299 aa 35189298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 340
Target Start/End: Complemental strand, 44875375 - 44875283
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctcctt 340  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  44875375 tccgtcctaatttataagcaaaa-aacactaattcacacttactaagaaaactaacacttagtgatttgaggtataaatttttgtgttctcctt 44875283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 25990944 - 25990845
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  25990944 tccgtcctaatttataagcaaaa-aacattaaatcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 25990846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 26479936 - 26479836
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  26479936 tccgttctaatttataagcaaaaaaacaataattcacacttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttctccttaaaata 26479837  T
Q  347 a 347  Q
    |    
T  26479836 a 26479836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 31970269 - 31970372
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttga 342  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||     
T  31970269 tccttccgtcctaatttataagcaaaa-aatactaattcacacttattaagaagattaacacttagtgatttgaggtatgattttttgtgttctccttgg 31970367  T
Q  343 aataa 347  Q
    |||||    
T  31970368 aataa 31970372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 40935581 - 40935676
Alignment:
Q  251 tcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  40935581 tcctaatttataagcaaaa-aacactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataa 40935676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 28017849 - 28017755
Alignment:
Q  250 gtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  28017849 gtcctaatttataagcaaaa-aacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttt--tgtactccttgaaataa 28017755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 15285998 - 15285900
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| |||||||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  15285998 tccgttctaatttataagaaaaa--acattaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctccttgaaata 15285901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 28916480 - 28916578
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||| ||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  28916480 tccgccctaatttataagaaaaa--acactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttggaata 28916577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 9128239 - 9128140
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| |||| || | |||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9128239 tccgtcctaatttataagtaaaa-aatattaattcacacttattaagaaaattaacacttagtgatttgaggtatacttttttgtgttctccttgaaata 9128141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 29488944 - 29488845
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||    
T  29488944 tccgtcctaatttataagtcaaa-aacactaattcacacttattaagaaaacgaacacttagtgatttgaggtataatttgttgtgttctccttggaata 29488846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 45357833 - 45357928
Alignment:
Q  241 aatccttccgtcctaatttataagcaaaataa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttc 335  Q
    ||||| ||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  45357833 aatccctccgtcctaatttataagcaaaaaaaacattaattcacacttattaagacaactaacacttagtgatttgaggtataattttttgtgttc 45357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 40220255 - 40220153
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacact---tagtgatttgaggtataattttttatgttctccttgaa 343  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||| |    
T  40220255 tccgtcctaatttacaagcaaaa-aacagtaattcacacttattaagaaaactaacacttagtagtgatttgaggtataattttttgtgttctccttgga 40220157  T
Q  344 ataa 347  Q
    ||||    
T  40220156 ataa 40220153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 15311373 - 15311274
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||||| ||||    
T  15311373 tccgtcataatttataagcataa-aacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtattctccttggaata 15311275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 18036740 - 18036641
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| |||| |||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| ||||    
T  18036740 tccgtcctaatttataagtaaaa-aacattaattcatacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttcttcttggaata 18036642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 425 - 487
Target Start/End: Complemental strand, 46949340 - 46949278
Alignment:
Q  425 caatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46949340 caatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataataacata 46949278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 6848278 - 6848372
Alignment:
Q  251 tcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||||||||||||| |||| |||||||||||||| ||||||| |||||||| | ||||||||||||||||| ||||||| |||||||||||||||||    
T  6848278 tcctaatttataagaaaaa-aacactaattcacatttattaa-aaaactaataattagtgatttgaggtatgattttttgtgttctccttgaaataa 6848372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 343
Target Start/End: Complemental strand, 47997140 - 47997055
Alignment:
Q  257 tttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaa 343  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| | ||||||    
T  47997140 tttataagcaaaa-aacagtaattcacacttattaagaaaactaacatttagtgatttgaggtattattttttgtgtttttcttgaa 47997055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 15285824 - 15285767
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataat 481  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15285824 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataat 15285767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 23873967 - 23874030
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  23873967 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 23874030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 25990768 - 25990705
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  25990768 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 25990705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 26907229 - 26907292
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  26907229 gcaatttgcatttaattttacattgaaaaagataatttgtttgaaaaaacataataatagcata 26907292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 28017678 - 28017615
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  28017678 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 28017615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 35941861 - 35941798
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  35941861 gcaatttgtatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcata 35941798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 43656177 - 43656240
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  43656177 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatgacata 43656240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 44875199 - 44875136
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  44875199 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 44875136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 247 - 320
Target Start/End: Complemental strand, 4529371 - 4529300
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggta 320  Q
    ||||| |||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4529371 tccgttctaatttataagaaaaa--acactaattcatacttattaagaaaactaacacttagtgatttgaggta 4529300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 4529207 - 4529144
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||    
T  4529207 gcaatttgcatttaattttacattggaaaaaatgatttatttgaaaaaacataataatagcata 4529144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 9128063 - 9128000
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  9128063 gcaatttacatttaattttacattgaaaaagatgatttgtttgaaaaaatataataatagcata 9128000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 18036564 - 18036501
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||    
T  18036564 gcaatttgcatttaattttactttggaaaagatgatttgtttgaaaaaacataataatagcata 18036501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 18852243 - 18852180
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| |||||    
T  18852243 gcaatttgcatttaattttacattggaaaaaataatttgtttgaaaaaacataataatgacata 18852180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 28916655 - 28916718
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||    
T  28916655 gcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacataataatagcata 28916718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 29488768 - 29488705
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  29488768 gcaacttgcatttaattttacattggaaaatattatttgtttgaaaaaacataataatagcata 29488705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 38942581 - 38942644
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  38942581 gcaacttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacataataatagcata 38942644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 40960614 - 40960677
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  40960614 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataaaaatagcata 40960677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 35884382 - 35884308
Alignment:
Q  273 cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||| |||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||  |||||||||    
T  35884382 cactagttcacatttattaagaaaactaactcttagtaatttgaggtataattttttgtgttctttttgaaataa 35884308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 425 - 487
Target Start/End: Complemental strand, 47996973 - 47996911
Alignment:
Q  425 caatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  47996973 caatttgtatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 47996911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 31970449 - 31970512
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||| |||||| |||||||||    
T  31970449 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaagacataaaaataacata 31970512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 39026386 - 39026449
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||    
T  39026386 gcaacttgcatttaattttacattggaaaatatgatttatttgaaaaaacataaaaatagcata 39026449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 40220076 - 40220014
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||| ||||    
T  40220076 gcaatttgcatttaattttacattggaaaagat-atttgtttgaaaaaacataataatagcata 40220014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 430 - 480
Target Start/End: Complemental strand, 15311192 - 15311142
Alignment:
Q  430 tgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataa 480  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15311192 tgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataa 15311142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 429 - 487
Target Start/End: Complemental strand, 49924434 - 49924376
Alignment:
Q  429 ttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  49924434 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 49924376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 18913486 - 18913539
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  18913486 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 18913539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 322
Target Start/End: Complemental strand, 36037433 - 36037359
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtata 322  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || | || ||||||| ||||    
T  36037433 tccgtcccaatttataagcaaaa-aacacaaattcacacttattaagaaaactaaaacatggtaatttgagttata 36037359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 40935753 - 40935816
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| |||||||||||||| |||||||| |||| ||||    
T  40935753 gcaacttgcatttaattttacattggaaaagatgatttgtttgaagaaacataaaaatagcata 40935816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 26479759 - 26479702
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataat 481  Q
    ||||||| |||| |||||||||||| |||| |||||||||||||||||| ||||||||    
T  26479759 gcaattttcattgaattttacattggaaaagatgatttgtttgaaaaaatataataat 26479702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 28734081 - 28734138
Alignment:
Q  7 agaagaaaaacaaaaacatgctgaagaagattggagtgttgtggaggaagaatcatca 64  Q
    |||||||||| | || |||| |||||||||||||||||||||||| ||||||||||||    
T  28734081 agaagaaaaatacaaccatgttgaagaagattggagtgttgtggaagaagaatcatca 28734138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 6848446 - 6848510
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttg-aaaaaacataataataacata 487  Q
    |||||||||||||||||||| |||| |||| |||||||||| | |||||||||||||||| ||||    
T  6848446 gcaatttgcatttaattttagattggaaaagatgatttgttagaaaaaaacataataatagcata 6848510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 35189221 - 35189157
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaa-aaaacataataataacata 487  Q
    |||||||| | ||||||||||||||||||| || ||||||||||| |||||||||||||| ||||    
T  35189221 gcaatttgtagttaattttacattgaaaaagattatttgtttgaaaaaaacataataataccata 35189157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 487
Target Start/End: Original strand, 45358025 - 45358079
Alignment:
Q  433 atttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||| |||| ||||    
T  45358025 atttaattttacattggaaaagatgatttgtttgaaataacataaaaatagcata 45358079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 36383948 - 36383885
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgttt-gaaaaaacataataataacata 487  Q
    ||||||||||||||||||||| ||| |||  ||||||| ||| ||||||||||||||||||||||    
T  36383948 gcaatttgcatttaattttactttggaaag-atgatttttttagaaaaaacataataataacata 36383885  T

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Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 24728587 - 24728640
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaa 301  Q
    |||||||||| |||||||||||| ||||  ||| |||||||||||||||||||||    
T  24728587 tccgtcctaaattataagcaaaaaaacaaaaat-cacacttattaagaaaactaa 24728640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 7e-38; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 8145974 - 8146073
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  8145974 tccgtcctaatttataagcaaaa-aacattaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctccttgaaata 8146072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 31316762 - 31316861
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  31316762 tccgtcctaatttataagcaaaa-aacactaattcacagttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 31316860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 25962409 - 25962508
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  25962409 tccgtcctaatttataagcaaaa-aagaataattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 25962507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 35462680 - 35462773
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttg 341  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  35462680 tccgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgttttctccttg 35462773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 8541525 - 8541624
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| ||||    
T  8541525 tccgtcctaatttataagcaaaa-aacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattcttcttggaata 8541623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 12639086 - 12638988
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||    
T  12639086 tccgtcctaatttataagaaaaa--acactaattcacacttattaagaaaactaacatttagttatttgaggtataattttttgtgttctccttggaata 12638989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 30086507 - 30086608
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt-atgttctccttgaaat 345  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||    
T  30086507 tccgttctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacatttagtaatttgaggtataattttttcgtgttctccttgaaat 30086606  T
Q  346 aa 347  Q
    ||    
T  30086607 aa 30086608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 16286044 - 16286143
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  16286044 tccgtcctaatttataagtaaaa-aacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctctttggaata 16286142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 347
Target Start/End: Complemental strand, 20915051 - 20914958
Alignment:
Q  253 ctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||    
T  20915051 ctaatttataagcaaaa-aatactaattcacacttattaagaaaactaacacttagtgatttaagatataattttttgtgttctccttggaataa 20914958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 341
Target Start/End: Original strand, 31690577 - 31690674
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttg 341  Q
    |||||||||| |||||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||    
T  31690577 tccttccgtcttaatttataagcaaaa-aatactaattcacacttattaagaaaattaatacttagtgatttgaggtataattttttgtgttcttcttg 31690674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 13146927 - 13146828
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||| ||||||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  13146927 tccgttctaatttataagcaaaa-aatactaattcatacttattatgaaaactaacacttagtgatttgaggtataattttttgtgttctctttggaata 13146829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 24432361 - 24432460
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    |||||| ||||||||||  |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  24432361 tccgtcttaatttataataaaaa-aagattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 24432459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 8146150 - 8146213
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  8146150 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacata 8146213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 8541701 - 8541764
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  8541701 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacata 8541764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 42365233 - 42365145
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttct 336  Q
    ||||| |||||||||||| |||| |||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  42365233 tccgttctaatttataagtaaaa-aacactaattcatatttattaagaaaactaatacttagtgatttgaggtacaattttttgtgttct 42365145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 37066207 - 37066283
Alignment:
Q  271 aacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaataa 347  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| |||| |||||    
T  37066207 aacagtaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattcttcttggaataa 37066283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 12638911 - 12638848
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  12638911 gcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaaacataataatagcata 12638848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 31316938 - 31317001
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  31316938 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataaaaataacata 31317001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 31690757 - 31690820
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  31690757 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 31690820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 426 - 487
Target Start/End: Original strand, 35462857 - 35462918
Alignment:
Q  426 aatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  35462857 aatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataatagcata 35462918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 13146751 - 13146688
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  13146751 gcaatttacatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcata 13146688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 30086685 - 30086748
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  30086685 gcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaacataataatgacata 30086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 426 - 472
Target Start/End: Original strand, 17825337 - 17825383
Alignment:
Q  426 aatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17825337 aatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 17825383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 429 - 487
Target Start/End: Original strand, 25962594 - 25962652
Alignment:
Q  429 ttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  25962594 ttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataaaaatagcata 25962652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 20914881 - 20914818
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  20914881 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcata 20914818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 36413897 - 36413983
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgtt 334  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||| || || ||||  |||||| ||||||||||| ||||    
T  36413897 tccgtcctaatttataaacaaaa-aacacaaattcacacttattaagaaaacaaaaacatagtagtttgagatataattttttgtgtt 36413983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 37066360 - 37066418
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataata 482  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||    
T  37066360 gcaatttgcatttaattttacattggaaaagattatttgtttgaaaaaatataataata 37066418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 16286220 - 16286273
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  16286220 gcaacttgcatttaattttacattgaaaaagataatttgtttgaaaaaacataa 16286273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 424 - 472
Target Start/End: Complemental strand, 42365057 - 42365009
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 472  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  42365057 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 42365009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 8143956 - 8143893
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacata 487  Q
    |||||||  |||||||||||| |||||||| | ||||| |||||||||||||||||||| ||||    
T  8143956 gcaatttatatttaattttactttgaaaaagaagatttatttgaaaaaacataataatagcata 8143893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 24432537 - 24432595
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataata 482  Q
    |||| |||||||||||||||||||| |||| ||||||| |||||||||| |||| ||||    
T  24432537 gcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaatataaaaata 24432595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 24439594 - 24439531
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgt-ttgaaaaaacataataataacata 487  Q
    ||||||||||||||||||||| ||| |||  ||||||| | ||||||||||||||||||||||||    
T  24439594 gcaatttgcatttaattttactttggaaag-atgatttttgttgaaaaaacataataataacata 24439531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 24439770 - 24439671
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttatgttctccttgaaata 346  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||| |||  ||| || |  | ||||||| ||||||||||| |||| | |||| ||||    
T  24439770 tccgtcctaatttataagcaaaa-aacacaatttcacacttattaaaaaagttaaaacattataatttgagatataattttttgtgttattcttggaata 24439672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 2002096 - 2002146
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaac 298  Q
    ||||||| |||||||||| |||| ||||| ||||||||||||||||||||||    
T  2002096 tccgtcccaatttataagaaaaa-aacacaaattcacacttattaagaaaac 2002146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 11261842 - 11261901
Alignment:
Q  243 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacac 304  Q
    |||||||||||||| |||||||||||| || |  || |||||||||||||| ||||||||||    
T  11261842 tccttccgtcctaaattataagcaaaaaaaaa--aaatcacacttattaagtaaactaacac 11261901  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 43589923 - 43589976
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaa 301  Q
    |||||||||| |||||||||||| ||||  ||| |||||||||||||||||||||    
T  43589923 tccgtcctaaattataagcaaaaaaacaaaaat-cacacttattaagaaaactaa 43589976  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 2002270 - 2002323
Alignment:
Q  424 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataa 477  Q
    ||||||||||||||||||||  ||| |||| ||||||| ||||||| |||||||    
T  2002270 gcaatttgcatttaattttattttggaaaagatgatttttttgaaataacataa 2002323  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 25841062 - 25841011
Alignment:
Q  249 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaa 301  Q
    |||||||| |||||||||||| ||||  ||| |||||||||||||||||||||    
T  25841062 cgtcctaaattataagcaaaaaaacaaaaat-cacacttattaagaaaactaa 25841011  T

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Target: scaffold0300 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 534 - 587
Alignment:
Q  247 tccgtcctaatttataagcaaaataacactaat-tcacacttattaagaaaactaa 301  Q
    |||||||||| |||||||||||| ||||  ||| ||||||||||||||||||||||    
T  534 tccgtcctaaattataagcaaaaaaaca--aatatcacacttattaagaaaactaa 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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