View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4622-Insertion-13 (Length: 346)
Name: NF4622-Insertion-13
Description: NF4622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4622-Insertion-13 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 8 - 346
Target Start/End: Original strand, 49202784 - 49203122
Alignment:
| Q |
8 |
aatacaaactagttcaaatagtccaactattttcattctgtgttttcttgaatgattttaaatttgttctctttacagtttgcaaaagatactggaaagt |
107 |
Q |
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| T |
49202784 |
aatacaaactagttcaaatagtcaaactattttcattctgttttttcttgaatgattttaaatttgttctctttacagtttgcaaaagatactggaaagt |
49202883 |
T |
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| Q |
108 |
acgtcgaggagaagaaactgaaggtagtcctcatcagcccaccatcttcaccagttttgctaccagtaaatggtgatatcaaacaggatccgtccaacca |
207 |
Q |
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| T |
49202884 |
acgtcgaggagaagaaactgaaggtagtcctcatcagcccaccatcttcaccagttttgctaccagtaaatggtgatatcaaacaggatccgtccaacca |
49202983 |
T |
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| Q |
208 |
aattaatgtgctaaaagatagggtgcccagtggaattgaaaacatacctccacctctaagagtgagctactttccttcaaagtttttatcatgaatctct |
307 |
Q |
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| T |
49202984 |
aattaatgtgctaaaagatagggtgcccagtggaattgaaaacatacctccacctctaagagtgagctactttccttcaaagtttttatcatgaatctct |
49203083 |
T |
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| Q |
308 |
ctctcacaagttacttggattatgaagaaacagtggcca |
346 |
Q |
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| T |
49203084 |
ctctcacaagttacttggattatgaagaaacagtggcca |
49203122 |
T |
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