View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4622-Insertion-14 (Length: 338)
Name: NF4622-Insertion-14
Description: NF4622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4622-Insertion-14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 12 - 338
Target Start/End: Complemental strand, 13456885 - 13456554
Alignment:
| Q |
12 |
taatggtatttacttcattggtgaaggatgatatggtgtaaagacactttaactttgagcatctct-----ggtgctcttttttaatttcaatatacttt |
106 |
Q |
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| T |
13456885 |
taatggtatttacttcattggtgaaggatgatatggtgtaaagacactttaactttgagcatctcttctctggtgctcttttttaatttcaatatacttt |
13456786 |
T |
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| Q |
107 |
ttgctgattnnnnnnncattagtagtgacttagggttaacacaagaccatgatgtaactattgttgtgcaattctagtatatagttgccacctaaataag |
206 |
Q |
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| T |
13456785 |
ttgctgattaaaaaaacattagtagtgacttagggttaacacaaggccatgatgtaactattgctgtgcaattcaagtatatagttgccacctaaataaa |
13456686 |
T |
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| Q |
207 |
catgacacaaatcctttaagaaaatatttccacagatcttacaaatgtatgttgctaaaatggccaagaaagggacacttcgtgtgtatattagaaagat |
306 |
Q |
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| T |
13456685 |
catgacacaaatcctttatgaaaatatatccacagatcttacaaatgtatgttgctaaaatggccaagaaagggacacttcgtgggtatattagaaagat |
13456586 |
T |
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| Q |
307 |
tattaagcaaaagatgatctggttgtagttaa |
338 |
Q |
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| T |
13456585 |
tattaagcaaaagatgatctggttgtagttaa |
13456554 |
T |
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