View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4622_low_10 (Length: 254)
Name: NF4622_low_10
Description: NF4622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4622_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 56043296 - 56043492
Alignment:
| Q |
17 |
cactttcttcactttcagaactcaaccactaactatctctgctattctcatgcaaatcgctgttattcccatcggaaagttcatggccgccactcttccc |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
56043296 |
cactttcttcactttcagaactcaaccactaactatctctgctattctcatgcaaatcgctgttcttcccatcggaaagttcatggccgccactcttccc |
56043395 |
T |
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| Q |
117 |
accaaagagtataacttttttgggcggtggcgtttcacgttgaatcctggtccgtttaatatgaaggagcatgttattatcactatttttgctaact |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56043396 |
accaaagagtataacttttttgggcggtggcgtttcacgttgaatcctggtccgtttaatatgaaggagcatgttattatcactatttttgctaact |
56043492 |
T |
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