View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4622_low_7 (Length: 329)
Name: NF4622_low_7
Description: NF4622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4622_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 319
Target Start/End: Original strand, 52675313 - 52675612
Alignment:
| Q |
20 |
gtgtgaagatggaattgaagaattaatgttgggaagaaagtgcatggttagctagcaaggtgctaattgagttggtgtgatgatttggtacgcagaagaa |
119 |
Q |
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| T |
52675313 |
gtgtgaagatggaattgaagaattaatgttgggaagaaagtgcatagttagctagcaaggtgctaattgagttggtgtgatggtttggtacgcagaagaa |
52675412 |
T |
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| Q |
120 |
agatagaagttagatcgtcaggtacttgaaagaattttctttcttgagattgagtagatgttcttctagttgttactgctagccgttgacgnnnnnnngg |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
52675413 |
agatagaagttagatcgtcaggtacttgaaagaattttctttcttgagattgagtagatgttcttctagttgttactgctagccgttgacgtttttttgg |
52675512 |
T |
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| Q |
220 |
aggtggtggacaaaccaagtcaaaggagttctttgatggtgatgtgggtggtgtgtggtaataataatgctcttcctcttgtacctcctttcttctctct |
319 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52675513 |
aggtggtggacagaccaagtcaaaggagttctttgatggtgatgtgggtggtgtgtggtaataataatgctcttcctcttgtacctcctttcttctctct |
52675612 |
T |
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