View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4622_low_9 (Length: 268)
Name: NF4622_low_9
Description: NF4622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4622_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 40382771 - 40382536
Alignment:
| Q |
18 |
atgagtttgatattaagccaccaaggtgcttcgtcaaagggattcagatgtttgataacactccgcttggtgatgtcccagggagtttgaaggttgagct |
117 |
Q |
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| T |
40382771 |
atgagtttgatattaagccaccaaggtgcttcgtcaaagggattcagatgtttgataacactccgcttggtgatgtcccagggagtttgaaggttgagct |
40382672 |
T |
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| Q |
118 |
gttgaagagcttgagtagtacactagggactaacataacgagttctacttgtgttgttactggagctgatatactgaagcagcaaggagtcacacaactt |
217 |
Q |
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| T |
40382671 |
gttgaagagcttgagtagtacactagggactaacataacgagttctacttgtgttgttactggagctgatatactgaagcagcaaggagtcacacaactt |
40382572 |
T |
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| Q |
218 |
agtaaatggaactgcttgttcatcaccattgctctg |
253 |
Q |
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| T |
40382571 |
agtaaatggaactgcttgttcatcaccattgctctg |
40382536 |
T |
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