View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4623-Insertion-7 (Length: 278)
Name: NF4623-Insertion-7
Description: NF4623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4623-Insertion-7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 7 - 278
Target Start/End: Original strand, 43751597 - 43751868
Alignment:
| Q |
7 |
agttattactctttttgttgatctgaagaataatggttatacttttcgtcctttgaatcagttcatggagatggagttaattgggttgaaacagcaagaa |
106 |
Q |
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| T |
43751597 |
agttattactctttttgttgatctgaagaataatggttatacttttcgtcctttgaatcagttcatggagatggagttaattgggttgaaacagcaagaa |
43751696 |
T |
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| Q |
107 |
tccctggagttgaatgtaaaactatgtcatataaaggtaaatctttaattaacatcattgttgcgactccttttaaaaagttaaagttgaatccaaccgt |
206 |
Q |
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| T |
43751697 |
tccctggagttgaatgtaaaactatgtcatataaaggtaaatctttaattaacatcattgttgcgactccttttaaaaagttaaagttgaatccaaccgt |
43751796 |
T |
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| Q |
207 |
atttagtaccaaatgttgttcagtagcggctatatagtggcgctacgataacataattcaaatataccgtca |
278 |
Q |
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| T |
43751797 |
atttagtaccaaatgttgttcagtagcggctatatagtggcgctacgataacataattcaaatataccgtca |
43751868 |
T |
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Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 49165194 - 49165304
Alignment:
| Q |
43 |
ttatacttttcgtcctttgaatcagttcatggagatggagttaattgggttgaaacagcaagaatccctggagttgaatgtaaaac---tatgtcatata |
139 |
Q |
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||||| ||||| |||||||||||||||||||||||||||||||| ||| | ||||| ||| ||||| | | |||| || ||||||| ||||||||||| |
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| T |
49165194 |
ttatatttttcatcctttgaatcagttcatggagatggagttaactggttagaaactgcaggaatcacagaagttaaaagtaaaactattatgtcatata |
49165293 |
T |
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| Q |
140 |
aaggtaaatct |
150 |
Q |
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| T |
49165294 |
aaggtaaatct |
49165304 |
T |
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