View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4625-Insertion-2 (Length: 546)

Name: NF4625-Insertion-2
Description: NF4625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4625-Insertion-2
NF4625-Insertion-2
[»] chr2 (58 HSPs)
chr2 (8-546)||(36756214-36756777)
chr2 (331-487)||(15657837-15657994)
chr2 (333-485)||(34784913-34785066)
chr2 (327-402)||(12940950-12941025)
chr2 (331-408)||(19536406-19536484)
chr2 (331-408)||(18421936-18422013)
chr2 (328-408)||(18841022-18841102)
chr2 (332-408)||(20539683-20539759)
chr2 (339-408)||(24894370-24894439)
chr2 (327-408)||(30404859-30404940)
chr2 (337-485)||(30717461-30717610)
chr2 (336-408)||(15972851-15972923)
chr2 (386-485)||(35056896-35056996)
chr2 (342-485)||(37419727-37419871)
chr2 (334-408)||(21624242-21624317)
chr2 (338-408)||(21374708-21374778)
chr2 (333-485)||(11223795-11223947)
chr2 (347-408)||(12668432-12668493)
chr2 (333-402)||(30335392-30335461)
chr2 (336-408)||(6940233-6940305)
chr2 (333-404)||(20242740-20242811)
chr2 (337-408)||(20473301-20473372)
chr2 (333-404)||(21616737-21616808)
chr2 (330-408)||(21091695-21091773)
chr2 (344-485)||(26769497-26769639)
chr2 (338-408)||(37558957-37559027)
chr2 (338-408)||(39323244-39323314)
chr2 (338-403)||(16069268-16069333)
chr2 (385-485)||(44860347-44860448)
chr2 (333-408)||(23058451-23058527)
chr2 (332-403)||(21782832-21782903)
chr2 (330-404)||(23717998-23718072)
chr2 (330-404)||(24105670-24105744)
chr2 (333-403)||(28412325-28412395)
chr2 (332-405)||(29663983-29664057)
chr2 (379-463)||(28524447-28524532)
chr2 (330-450)||(28677880-28677996)
chr2 (424-485)||(34993924-34993985)
chr2 (339-408)||(38442289-38442357)
chr2 (358-486)||(2438660-2438778)
chr2 (333-408)||(14996232-14996308)
chr2 (330-408)||(28596444-28596519)
chr2 (344-404)||(31808063-31808123)
chr2 (344-408)||(38117168-38117232)
chr2 (336-404)||(10547941-10548011)
chr2 (341-404)||(19573962-19574024)
chr2 (338-393)||(25543214-25543269)
chr2 (343-401)||(27460011-27460070)
chr2 (349-408)||(33153415-33153474)
chr2 (513-546)||(36793556-36793589)
chr2 (424-485)||(42511324-42511385)
chr2 (357-420)||(974746-974810)
chr2 (364-404)||(5367198-5367238)
chr2 (328-404)||(6290127-6290203)
chr2 (344-392)||(11670741-11670789)
chr2 (364-404)||(18622612-18622652)
chr2 (327-403)||(36409641-36409717)
chr2 (514-546)||(36772442-36772474)
[»] scaffold0003 (1 HSPs)
scaffold0003 (331-485)||(241567-241722)
[»] chr3 (60 HSPs)
chr3 (333-485)||(14216867-14217020)
chr3 (333-485)||(14222996-14223149)
chr3 (334-485)||(15999952-16000099)
chr3 (331-485)||(41961581-41961736)
chr3 (345-487)||(4987220-4987363)
chr3 (331-485)||(15796225-15796380)
chr3 (341-485)||(28812499-28812643)
chr3 (331-485)||(55401048-55401192)
chr3 (331-485)||(28917974-28918120)
chr3 (331-399)||(3164043-3164111)
chr3 (327-400)||(10954919-10954994)
chr3 (331-402)||(3610606-3610677)
chr3 (328-407)||(26492215-26492294)
chr3 (350-447)||(14209105-14209203)
chr3 (327-401)||(14979150-14979224)
chr3 (344-485)||(34185054-34185196)
chr3 (331-408)||(8587030-8587107)
chr3 (331-408)||(10335295-10335372)
chr3 (331-408)||(24205050-24205127)
chr3 (331-448)||(25064882-25064998)
chr3 (327-408)||(26508079-26508160)
chr3 (332-408)||(8383231-8383307)
chr3 (344-408)||(20503451-20503515)
chr3 (332-408)||(35312028-35312104)
chr3 (331-444)||(750590-750705)
chr3 (337-404)||(11493374-11493441)
chr3 (338-408)||(25948896-25948966)
chr3 (331-408)||(35994747-35994823)
chr3 (332-408)||(9800014-9800090)
chr3 (336-408)||(10268495-10268567)
chr3 (366-485)||(16789020-16789139)
chr3 (350-402)||(34910309-34910361)
chr3 (341-404)||(18426932-18426995)
chr3 (332-406)||(14840302-14840376)
chr3 (344-402)||(21479104-21479162)
chr3 (330-399)||(2620071-2620140)
chr3 (424-485)||(7171557-7171618)
chr3 (331-408)||(14829663-14829739)
chr3 (340-464)||(14832081-14832206)
chr3 (379-485)||(10690194-10690300)
chr3 (333-408)||(11610496-11610571)
chr3 (344-402)||(14747547-14747606)
chr3 (341-404)||(23870572-23870635)
chr3 (341-404)||(29112293-29112356)
chr3 (334-408)||(4990976-4991050)
chr3 (345-418)||(21256984-21257058)
chr3 (338-408)||(22774079-22774149)
chr3 (357-485)||(27505245-27505368)
chr3 (330-404)||(38731190-38731264)
chr3 (513-546)||(35692214-35692247)
chr3 (344-393)||(40052318-40052367)
chr3 (344-404)||(40993348-40993409)
chr3 (344-401)||(41319326-41319383)
chr3 (338-374)||(3865599-3865635)
chr3 (338-374)||(10318077-10318113)
chr3 (429-485)||(11252037-11252093)
chr3 (333-409)||(14618756-14618832)
chr3 (333-408)||(15505799-15505875)
chr3 (317-391)||(32400731-32400807)
chr3 (344-408)||(39756222-39756286)
[»] chr5 (52 HSPs)
chr5 (331-485)||(21522723-21522878)
chr5 (331-485)||(21533289-21533444)
chr5 (333-485)||(21542005-21542158)
chr5 (331-483)||(36642696-36642848)
chr5 (341-485)||(39698524-39698669)
chr5 (331-408)||(21191065-21191142)
chr5 (331-405)||(22013387-22013461)
chr5 (331-408)||(6247595-6247672)
chr5 (331-408)||(13287408-13287485)
chr5 (327-407)||(14422873-14422951)
chr5 (344-483)||(30183535-30183675)
chr5 (331-485)||(6401471-6401626)
chr5 (338-408)||(14674249-14674319)
chr5 (331-416)||(24906301-24906387)
chr5 (338-408)||(43001780-43001850)
chr5 (347-408)||(33178014-33178075)
chr5 (343-485)||(3966488-3966631)
chr5 (344-485)||(31084309-31084445)
chr5 (350-408)||(7218276-7218334)
chr5 (336-402)||(41995449-41995515)
chr5 (331-408)||(6326306-6326383)
chr5 (338-403)||(6770523-6770588)
chr5 (357-485)||(7677704-7677833)
chr5 (331-408)||(4105230-4105309)
chr5 (331-408)||(15382450-15382529)
chr5 (334-398)||(19552562-19552626)
chr5 (339-474)||(19579682-19579818)
chr5 (327-408)||(8419994-8420077)
chr5 (333-400)||(15410465-15410532)
chr5 (330-408)||(30135285-30135364)
chr5 (338-408)||(21576754-21576824)
chr5 (338-404)||(27144443-27144509)
chr5 (328-402)||(41633705-41633779)
chr5 (332-408)||(15405064-15405138)
chr5 (343-408)||(21351914-21351979)
chr5 (336-397)||(40000555-40000616)
chr5 (331-442)||(3751904-3752015)
chr5 (344-404)||(6035469-6035528)
chr5 (342-485)||(30098310-30098454)
chr5 (333-404)||(14574062-14574133)
chr5 (342-408)||(10298553-10298619)
chr5 (332-407)||(25888303-25888380)
chr5 (339-408)||(31264421-31264488)
chr5 (331-393)||(41558707-41558769)
chr5 (424-485)||(21576687-21576748)
chr5 (331-408)||(25863177-25863254)
chr5 (424-485)||(27932291-27932352)
chr5 (343-408)||(42893345-42893410)
chr5 (341-401)||(12641657-12641717)
chr5 (334-402)||(37328859-37328927)
chr5 (361-405)||(40131624-40131668)
chr5 (334-402)||(42488068-42488136)
[»] chr8 (51 HSPs)
chr8 (341-485)||(15816060-15816205)
chr8 (331-485)||(22651949-22652104)
chr8 (331-485)||(29510235-29510390)
chr8 (332-445)||(2572027-2572141)
chr8 (331-485)||(4673356-4673511)
chr8 (345-408)||(22595981-22596044)
chr8 (333-396)||(41838144-41838207)
chr8 (338-408)||(36450763-36450833)
chr8 (331-408)||(25192356-25192433)
chr8 (328-408)||(20873039-20873119)
chr8 (350-485)||(29447041-29447177)
chr8 (331-485)||(8343289-8343444)
chr8 (358-485)||(21465412-21465540)
chr8 (333-404)||(3677761-3677832)
chr8 (335-402)||(18170497-18170564)
chr8 (335-402)||(18634065-18634132)
chr8 (330-408)||(24669405-24669483)
chr8 (334-404)||(36934646-36934716)
chr8 (328-404)||(7472528-7472605)
chr8 (341-408)||(22204622-22204691)
chr8 (344-404)||(4786351-4786411)
chr8 (328-408)||(18407690-18407769)
chr8 (342-409)||(30271299-30271366)
chr8 (341-404)||(34897068-34897131)
chr8 (331-393)||(13436988-13437050)
chr8 (338-404)||(14134679-14134745)
chr8 (334-401)||(24727768-24727837)
chr8 (333-486)||(44067491-44067645)
chr8 (331-408)||(926797-926874)
chr8 (331-408)||(22197751-22197828)
chr8 (331-404)||(27213520-27213593)
chr8 (344-408)||(20679404-20679468)
chr8 (328-404)||(29776006-29776082)
chr8 (331-407)||(31556970-31557045)
chr8 (424-483)||(5813648-5813707)
chr8 (333-404)||(13203616-13203687)
chr8 (358-420)||(25566841-25566904)
chr8 (379-485)||(26902106-26902213)
chr8 (331-485)||(28745471-28745626)
chr8 (330-408)||(4298895-4298973)
chr8 (331-400)||(24857982-24858054)
chr8 (363-408)||(4948657-4948702)
chr8 (327-408)||(9414884-9414965)
chr8 (331-404)||(24362215-24362288)
chr8 (424-485)||(36450696-36450757)
chr8 (429-485)||(3951478-3951534)
chr8 (366-485)||(11927017-11927137)
chr8 (334-485)||(11944641-11944793)
chr8 (332-404)||(12570521-12570593)
chr8 (331-399)||(28642381-28642449)
chr8 (514-546)||(38085944-38085976)
[»] chr6 (65 HSPs)
chr6 (333-485)||(8365450-8365603)
chr6 (331-485)||(16766670-16766825)
chr6 (330-485)||(12696296-12696446)
chr6 (316-408)||(16833266-16833358)
chr6 (330-408)||(8776982-8777060)
chr6 (327-408)||(10770683-10770764)
chr6 (331-408)||(34595107-34595184)
chr6 (331-485)||(9107301-9107456)
chr6 (333-404)||(9658854-9658925)
chr6 (334-404)||(13851712-13851782)
chr6 (330-408)||(17435171-17435249)
chr6 (334-407)||(3398595-3398667)
chr6 (331-408)||(7938089-7938166)
chr6 (361-485)||(31384923-31385047)
chr6 (331-485)||(3209355-3209516)
chr6 (332-408)||(7977839-7977915)
chr6 (333-408)||(15489741-15489816)
chr6 (338-408)||(17841598-17841668)
chr6 (331-408)||(426523-426600)
chr6 (331-408)||(853868-853945)
chr6 (334-408)||(1681734-1681808)
chr6 (338-408)||(28152079-28152148)
chr6 (330-408)||(31959131-31959209)
chr6 (331-404)||(9027151-9027224)
chr6 (335-408)||(17341673-17341746)
chr6 (332-404)||(13360385-13360457)
chr6 (345-408)||(7801165-7801228)
chr6 (365-463)||(9522898-9522997)
chr6 (338-405)||(16388245-16388311)
chr6 (338-408)||(17302536-17302607)
chr6 (344-402)||(5970123-5970181)
chr6 (330-408)||(6898290-6898368)
chr6 (334-404)||(1532214-1532286)
chr6 (350-485)||(8713971-8714108)
chr6 (424-485)||(17327592-17327653)
chr6 (336-448)||(25038039-25038152)
chr6 (510-546)||(7441981-7442017)
chr6 (328-404)||(13789124-13789200)
chr6 (328-404)||(13797743-13797819)
chr6 (336-404)||(19044442-19044510)
chr6 (339-402)||(2224207-2224270)
chr6 (333-404)||(7086770-7086841)
chr6 (365-408)||(32511675-32511718)
chr6 (342-404)||(7265606-7265668)
chr6 (333-403)||(8805586-8805656)
chr6 (332-485)||(9629357-9629511)
chr6 (359-408)||(9911537-9911587)
chr6 (338-404)||(15443675-15443741)
chr6 (346-404)||(24115860-24115918)
chr6 (331-404)||(2153900-2153973)
chr6 (424-485)||(4877999-4878059)
chr6 (513-546)||(7432464-7432497)
chr6 (429-485)||(9658940-9658997)
chr6 (424-485)||(17841531-17841592)
chr6 (347-404)||(19040341-19040398)
chr6 (333-402)||(23771554-23771622)
chr6 (358-403)||(34225823-34225868)
chr6 (368-408)||(1700362-1700402)
chr6 (332-404)||(5732523-5732595)
chr6 (341-401)||(7930288-7930348)
chr6 (429-485)||(8776910-8776966)
chr6 (344-404)||(17302333-17302393)
chr6 (344-404)||(24833246-24833306)
chr6 (341-402)||(27904051-27904114)
chr6 (332-404)||(34073360-34073432)
[»] chr1 (68 HSPs)
chr1 (331-485)||(1486646-1486795)
chr1 (333-485)||(47989473-47989625)
chr1 (317-408)||(48450596-48450687)
chr1 (331-404)||(398778-398851)
chr1 (331-408)||(5376509-5376586)
chr1 (331-485)||(40917724-40917877)
chr1 (331-485)||(5944254-5944411)
chr1 (327-408)||(19058865-19058947)
chr1 (331-475)||(6612112-6612257)
chr1 (350-485)||(9828036-9828172)
chr1 (342-485)||(37598816-37598948)
chr1 (338-408)||(38078670-38078740)
chr1 (327-408)||(14359531-14359611)
chr1 (340-403)||(9033021-9033085)
chr1 (331-485)||(15323136-15323285)
chr1 (344-408)||(22881625-22881689)
chr1 (341-408)||(1815240-1815307)
chr1 (344-485)||(6427447-6427592)
chr1 (331-485)||(31694641-31694796)
chr1 (333-404)||(34298411-34298482)
chr1 (327-448)||(9629868-9629990)
chr1 (334-404)||(16927198-16927268)
chr1 (334-408)||(42359458-42359532)
chr1 (338-408)||(46348392-46348462)
chr1 (327-404)||(5898279-5898356)
chr1 (327-408)||(21378547-21378628)
chr1 (327-408)||(28273097-28273178)
chr1 (348-408)||(113289-113349)
chr1 (330-398)||(2896140-2896208)
chr1 (331-408)||(18471271-18471350)
chr1 (334-398)||(21366039-21366103)
chr1 (344-408)||(24577195-24577259)
chr1 (331-402)||(10572604-10572675)
chr1 (331-402)||(16297298-16297369)
chr1 (330-404)||(6427322-6427396)
chr1 (344-485)||(32461395-32461536)
chr1 (327-404)||(36878429-36878507)
chr1 (331-404)||(7918224-7918297)
chr1 (351-404)||(13436451-13436504)
chr1 (331-404)||(15641043-15641116)
chr1 (338-407)||(18556466-18556535)
chr1 (331-400)||(20157367-20157436)
chr1 (335-408)||(31015020-31015093)
chr1 (344-404)||(13997869-13997929)
chr1 (429-485)||(18471356-18471412)
chr1 (343-407)||(31672905-31672969)
chr1 (327-442)||(34315681-34315797)
chr1 (331-402)||(1262857-1262928)
chr1 (341-408)||(1705001-1705068)
chr1 (327-485)||(21032176-21032334)
chr1 (379-485)||(25934637-25934744)
chr1 (357-408)||(40258942-40258993)
chr1 (331-374)||(48040505-48040548)
chr1 (358-408)||(18190117-18190167)
chr1 (346-412)||(19324550-19324616)
chr1 (344-402)||(23622304-23622362)
chr1 (331-408)||(5927349-5927426)
chr1 (358-407)||(6332671-6332719)
chr1 (331-404)||(10577748-10577821)
chr1 (340-401)||(12443476-12443537)
chr1 (344-475)||(17831474-17831604)
chr1 (331-404)||(22794091-22794164)
chr1 (452-485)||(28663681-28663714)
chr1 (331-404)||(34257923-34257996)
chr1 (379-443)||(34371734-34371799)
chr1 (336-404)||(17754289-17754357)
chr1 (327-399)||(30359357-30359429)
chr1 (357-408)||(51410023-51410075)
[»] chr7 (65 HSPs)
chr7 (331-485)||(24339615-24339770)
chr7 (331-482)||(13770664-13770810)
chr7 (332-485)||(43027406-43027554)
chr7 (349-485)||(11665371-11665508)
chr7 (327-408)||(24105647-24105728)
chr7 (331-408)||(27945014-27945091)
chr7 (331-485)||(5409773-5409922)
chr7 (338-485)||(15680789-15680926)
chr7 (345-404)||(41020483-41020542)
chr7 (345-485)||(7438693-7438834)
chr7 (331-408)||(25481875-25481952)
chr7 (333-402)||(26733279-26733348)
chr7 (332-404)||(5235960-5236032)
chr7 (336-404)||(18013087-18013155)
chr7 (331-482)||(43249966-43250118)
chr7 (331-409)||(13557749-13557830)
chr7 (334-404)||(21140995-21141065)
chr7 (330-404)||(22868014-22868088)
chr7 (365-486)||(26033391-26033513)
chr7 (344-409)||(8234132-8234197)
chr7 (331-408)||(11061085-11061162)
chr7 (424-485)||(21864864-21864925)
chr7 (328-404)||(15902792-15902868)
chr7 (333-463)||(6028600-6028731)
chr7 (345-408)||(35861951-35862014)
chr7 (384-485)||(4794915-4795017)
chr7 (365-482)||(8160423-8160541)
chr7 (334-408)||(14077443-14077517)
chr7 (334-408)||(14387471-14387545)
chr7 (344-448)||(6630880-6630985)
chr7 (358-485)||(9778500-9778622)
chr7 (327-408)||(10042906-10042987)
chr7 (344-404)||(5835233-5835293)
chr7 (344-408)||(9408343-9408407)
chr7 (333-404)||(18213046-18213118)
chr7 (510-546)||(30034295-30034331)
chr7 (333-485)||(32093956-32094105)
chr7 (333-408)||(598183-598258)
chr7 (327-374)||(2034410-2034457)
chr7 (357-408)||(3991323-3991374)
chr7 (331-394)||(11722121-11722184)
chr7 (333-400)||(21826248-21826315)
chr7 (327-374)||(28401112-28401159)
chr7 (333-408)||(33994187-33994262)
chr7 (357-419)||(3801203-3801265)
chr7 (357-407)||(4024026-4024076)
chr7 (334-404)||(7328704-7328774)
chr7 (338-408)||(18215195-18215265)
chr7 (350-408)||(25822647-25822705)
chr7 (343-401)||(32308105-32308163)
chr7 (331-393)||(36297369-36297430)
chr7 (339-408)||(7197306-7197375)
chr7 (350-407)||(11831424-11831481)
chr7 (331-404)||(17851404-17851477)
chr7 (424-485)||(17852056-17852117)
chr7 (424-485)||(20545186-20545247)
chr7 (330-403)||(29787383-29787456)
chr7 (429-485)||(598269-598325)
chr7 (346-406)||(3938131-3938191)
chr7 (331-371)||(4793836-4793876)
chr7 (339-387)||(4909851-4909899)
chr7 (366-406)||(8056956-8056995)
chr7 (331-408)||(21864779-21864858)
chr7 (437-485)||(40131941-40131989)
chr7 (344-404)||(42720903-42720963)
[»] chr4 (45 HSPs)
chr4 (333-463)||(27706130-27706261)
chr4 (331-485)||(23292928-23293072)
chr4 (333-485)||(19482643-19482796)
chr4 (331-485)||(5414103-5414258)
chr4 (333-396)||(11651155-11651218)
chr4 (330-408)||(40481609-40481686)
chr4 (327-408)||(12797347-12797427)
chr4 (331-408)||(35157994-35158071)
chr4 (331-485)||(36635297-36635447)
chr4 (331-483)||(21945476-21945618)
chr4 (338-408)||(30298926-30298997)
chr4 (338-408)||(30327794-30327865)
chr4 (330-408)||(49430997-49431076)
chr4 (333-482)||(30838185-30838335)
chr4 (341-402)||(4383351-4383411)
chr4 (350-485)||(24613632-24613768)
chr4 (379-485)||(30982809-30982916)
chr4 (338-404)||(40179649-40179715)
chr4 (358-408)||(54580032-54580082)
chr4 (330-485)||(3947703-3947853)
chr4 (331-408)||(12895283-12895360)
chr4 (333-408)||(20633460-20633532)
chr4 (331-408)||(28084494-28084572)
chr4 (349-407)||(32273536-32273594)
chr4 (330-485)||(752873-753021)
chr4 (341-448)||(22234858-22234967)
chr4 (327-404)||(22440613-22440690)
chr4 (331-404)||(24343480-24343553)
chr4 (344-408)||(24543967-24544032)
chr4 (429-485)||(715547-715603)
chr4 (333-408)||(12708121-12708197)
chr4 (332-408)||(14126120-14126196)
chr4 (331-485)||(847924-848079)
chr4 (424-486)||(4157205-4157267)
chr4 (424-486)||(4157492-4157554)
chr4 (338-404)||(26504312-26504378)
chr4 (333-399)||(34515892-34515958)
chr4 (327-404)||(35723397-35723474)
chr4 (330-399)||(28720848-28720916)
chr4 (327-408)||(34306813-34306893)
chr4 (357-408)||(715616-715668)
chr4 (344-408)||(11596361-11596425)
chr4 (344-404)||(15029751-15029811)
chr4 (332-408)||(16303275-16303351)
chr4 (421-485)||(35161089-35161153)
[»] scaffold0018 (2 HSPs)
scaffold0018 (331-408)||(178827-178905)
scaffold0018 (333-408)||(192258-192333)
[»] scaffold0223 (1 HSPs)
scaffold0223 (331-408)||(20145-20222)
[»] scaffold0136 (1 HSPs)
scaffold0136 (333-485)||(3780-3933)
[»] scaffold0246 (1 HSPs)
scaffold0246 (330-408)||(19548-19625)
[»] scaffold0171 (2 HSPs)
scaffold0171 (330-408)||(23392-23470)
scaffold0171 (331-408)||(23483-23561)
[»] scaffold0103 (1 HSPs)
scaffold0103 (338-408)||(51791-51861)
[»] scaffold0450 (1 HSPs)
scaffold0450 (345-485)||(8566-8707)
[»] scaffold0027 (1 HSPs)
scaffold0027 (331-402)||(46655-46726)
[»] scaffold0083 (1 HSPs)
scaffold0083 (331-408)||(45539-45617)
[»] scaffold0050 (1 HSPs)
scaffold0050 (327-408)||(70246-70328)
[»] scaffold0122 (2 HSPs)
scaffold0122 (331-408)||(8639-8716)
scaffold0122 (350-402)||(8002-8054)
[»] scaffold0053 (1 HSPs)
scaffold0053 (331-408)||(8771-8848)
[»] scaffold0019 (1 HSPs)
scaffold0019 (344-485)||(71709-71853)
[»] scaffold0007 (1 HSPs)
scaffold0007 (331-408)||(225277-225354)
[»] scaffold0306 (1 HSPs)
scaffold0306 (338-402)||(13380-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (338-402)||(21883-21947)
[»] scaffold0361 (1 HSPs)
scaffold0361 (350-408)||(14522-14580)
[»] scaffold0008 (1 HSPs)
scaffold0008 (336-485)||(263303-263453)
[»] scaffold0021 (1 HSPs)
scaffold0021 (331-408)||(130455-130532)
[»] scaffold0623 (1 HSPs)
scaffold0623 (330-485)||(5927-6083)
[»] scaffold0066 (1 HSPs)
scaffold0066 (350-402)||(33378-33430)
[»] scaffold0722 (1 HSPs)
scaffold0722 (341-408)||(7041-7108)
[»] scaffold0004 (2 HSPs)
scaffold0004 (341-408)||(92790-92857)
scaffold0004 (345-408)||(123612-123678)
[»] scaffold0652 (1 HSPs)
scaffold0652 (334-408)||(471-545)
[»] scaffold0227 (1 HSPs)
scaffold0227 (350-408)||(7320-7378)
[»] scaffold0793 (1 HSPs)
scaffold0793 (330-485)||(4823-4971)
[»] scaffold0380 (1 HSPs)
scaffold0380 (427-485)||(8660-8718)
[»] scaffold0123 (1 HSPs)
scaffold0123 (379-448)||(44493-44563)
[»] scaffold0044 (1 HSPs)
scaffold0044 (379-448)||(53201-53271)
[»] scaffold0011 (1 HSPs)
scaffold0011 (358-408)||(17758-17808)
[»] scaffold0512 (1 HSPs)
scaffold0512 (424-485)||(4978-5039)
[»] scaffold0085 (1 HSPs)
scaffold0085 (327-393)||(26360-26428)
[»] scaffold1528 (1 HSPs)
scaffold1528 (336-404)||(1013-1081)
[»] scaffold0086 (1 HSPs)
scaffold0086 (429-481)||(3000-3052)
[»] scaffold0022 (1 HSPs)
scaffold0022 (332-404)||(90817-90889)


Alignment Details
Target: chr2 (Bit Score: 369; Significance: 0; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 8 - 546
Target Start/End: Complemental strand, 36756777 - 36756214
Alignment:
Q  8 aaagtgacagttacctccgatggtggattttattggctggatcattacagtgaagtaaaaaaccaaccattgatttaataaag-----------aattaa 96  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |            ||||||    
T  36756777 aaagtgacagttacctaccatggtggattttattggctggatcattacagtgaagtaaaaaaccaaccattgatttaaaagattgaatcagtataattaa 36756678  T
Q  97 atgtagtgatcaggattttatatagaagattattggtcaagtgcattggcaatttagcattgtaattaatggttannnnnnnagtttaccatactgattc 196  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       ||||||| ||||||||||    
T  36756677 atgtagtgatcaggattttatatagaagattattggtgaagtgcattggcaatttagcattgtaattaatggttatttttttagtttactatactgattc 36756578  T
Q  197 aatctaatatcaagttcaccatactaatttcaaaccgtcatctcaagtataatagagtagattaatcgtccaatttaacatactatgatttagatctctg 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  36756577 aatctaatatcaagttcaccatactaatttcaaaccgtcatctcaagtataatagagtagattaatcgtccaatttaacatactatgatttagatctcta 36756478  T
Q  297 gtaggtgaatcactgatataatgaagccttgatacggac-------------acgacacggacactgacacgtcgacacaactaataatttaaagaaata 383  Q
    ||||| |||||||||||||||||||||||||||||||||             ||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  36756477 gtaggagaatcactgatataatgaagccttgatacggacacgaacatcggatacgacacagacactgacacgtcgacacaactaataatttgaagaaata 36756378  T
Q  384 acataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgctt 482  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  36756377 acataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaacacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgctt 36756278  T
Q  483 cattaatattcaatgttcgagaacctcaaatatatgaggatgtagctcagatggtagagcgctc 546  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  36756277 cattaatatttaatgttcgagatcctcaaatatatggggatgtagctcagatggtagagtgctc 36756214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 331 - 487
Target Start/End: Original strand, 15657837 - 15657994
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||  | |||| ||||||||||||||||||| || || |||| |||||||   |||| |    
T  15657837 cggacacgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcgga 15657936  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcatta 487  Q
    | ||||||||||||||| | |  ||||||||| | | |||||||||  ||||||||||    
T  15657937 cgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcatta 15657994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 34785066 - 34784913
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    ||||||||||||||||||||||  |||||||||||||  ||| |  |||| |||||||| |||||||||||| ||| |||| ||||||  |  ||| |||    
T  34785066 gacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggaca 34784967  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| |||| ||||| |  |||||||| |||| |||||||||||||||||||    
T  34784966 cgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcat 34784913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 402
Target Start/End: Complemental strand, 12941025 - 12940950
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||| || |||| | |||||||||||||||||    
T  12941025 gatacagacacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 19536484 - 19536406
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||| |||||    
T  19536484 cggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtg 19536406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 18421936 - 18422013
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||||| |||||    
T  18421936 cggatacgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtg 18422013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 18841102 - 18841022
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| || |||| |||||||| |||||||||| |||||    
T  18841102 atacggacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtg 18841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 20539759 - 20539683
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||| | |||||| |||||||||| |||||    
T  20539759 ggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtg 20539683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 339 - 408
Target Start/End: Original strand, 24894370 - 24894439
Alignment:
Q  339 acacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||| ||||| |||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtg 24894439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 30404940 - 30404859
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||| |||||||||||||||||| ||||||   ||||||||| || |||| ||||||||||||||||||| |||||    
T  30404940 gatacggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtg 30404859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 337 - 485
Target Start/End: Complemental strand, 30717610 - 30717461
Alignment:
Q  337 cgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgac 435  Q
    |||||||||||||||||   ||||| | |||||||||| || |||| ||||||||||||||||||| ||||| || | ||||||    |||| |||||||    
T  30717610 cgacacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 30717511  T
Q  436 acgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| |||||| |  | ||||||||| | ||||||||| |||||||||    
T  30717510 acgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcat 30717461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 15972851 - 15972923
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||||| |||||||| ||||||||| || |||| ||| ||||||||||||||| |||||    
T  15972851 acgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtg 15972923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 485
Target Start/End: Original strand, 35056896 - 35056996
Alignment:
Q  386 ataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttca 484  Q
    ||||||||||||||||||| ||| |||| ||||||  | |||| |||||||||||||||||||| | ||||||||||||   ||||||||| ||||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttca 35056995  T
Q  485 t 485  Q
    |    
T  35056996 t 35056996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 485
Target Start/End: Original strand, 37419727 - 37419871
Alignment:
Q  342 cggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtg 440  Q
    |||||||||||||| |||||   | |||||||| || |||| ||| ||||||||||||||| ||||| |||| ||||||  | |||| ||||||  ||||    
T  37419727 cggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtg 37419826  T
Q  441 tccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||| |  ||||||||||| | ||||||||| |||||||||    
T  37419827 tccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 37419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 21624242 - 21624317
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataa-tttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||| |||||||||||| ||||||| ||||||| |||||| ||||| |||||||||||||||||| |||||    
T  21624242 acacgacacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtg 21624317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 21374778 - 21374708
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| ||||| ||||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  21374778 gacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtg 21374708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 11223947 - 11223795
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    |||| |||| |||||| ||||||  |||||| |||||| ||| || |||||||||||||||||||||||| ||||| |||| || |||  | |||| |||    
T  11223947 gacatgacatggacacagacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggaca 11223848  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| |||| ||||| |  |||||||||||   ||||||||| |||||||||    
T  11223847 cgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 11223795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 408
Target Start/End: Complemental strand, 12668493 - 12668432
Alignment:
Q  347 actgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||| ||||| |||||||||||| || |||| |||||||||||||||||||||||||    
T  12668493 actgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtg 12668432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 30335392 - 30335461
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||||||||||||||  |||| |||||||||||||||||| || |||| |||||||| ||||||||||    
T  30335392 gacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaatta 30335461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 6940233 - 6940305
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||||| ||||||| |||||||||| || || | |||||||| |||||||||| |||||    
T  6940233 acgacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtg 6940305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 404
Target Start/End: Complemental strand, 20242811 - 20242740
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||| ||||||||||||| |||||||||||||  ||| |  |||| |||||||||||||||||||||    
T  20242811 gacacgacatggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattata 20242740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 20473301 - 20473372
Alignment:
Q  337 cgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| |||||||||| | ||||||||||||||||||||| || | | ||||||||||||||||| |||||    
T  20473301 cgacacagacactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtg 20473372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 21616737 - 21616808
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||||| |||||| ||||||  |||||||||| |  |||| |||||||||||||||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 21616808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 21091695 - 21091773
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||| | ||||||||||||||  ||||||  ||||||||||||  |||||||||| ||||||||||||| |||||    
T  21091695 acggacacaagacggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtg 21091773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 344 - 485
Target Start/End: Original strand, 26769497 - 26769639
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtc 442  Q
    ||||| |||||| |||||||||||||||||| || | || |||| ||   ||||||||| ||||| |||| || |||  |  ||| ||||||||||||||    
T  26769497 gacacagacacgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtc 26769596  T
Q  443 cgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| |  ||||||||||| | ||||||||| |||||||||    
T  26769597 cgacactgggacacgcctaatccgaggagtgtccgtgcttcat 26769639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 37558957 - 37559027
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||||| ||||||||||  | |||| |||||||||| |||||||| |||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtg 37559027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 39323244 - 39323314
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||| ||||||||||  |||||||||| |  |||| ||||||||||||||||||| |||||    
T  39323244 gacacggacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtg 39323314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 16069333 - 16069268
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattat 403  Q
    |||||||||||||||||| ||||||   |||||||||||| |||| | ||||||||||||||||||    
T  16069333 gacacggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 44860347 - 44860448
Alignment:
Q  385 cataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttc 483  Q
    |||||||||||||||||||| ||| |||| ||||||| | || | |||||||| ||||||||||  |  |||| |||||||| ||||||||| |||||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttc 44860446  T
Q  484 at 485  Q
    ||    
T  44860447 at 44860448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 408
Target Start/End: Complemental strand, 23058527 - 23058451
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||| ||||||| | |||||| ||||||||| ||| |||| ||||||| ||||||||||| |||||    
T  23058527 gacacgacacggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtg 23058451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 403
Target Start/End: Complemental strand, 21782903 - 21782832
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattat 403  Q
    |||||||||||  ||||||||||| ||||||  |||||||||| |  |||| ||||||||||||||||||||    
T  21782903 ggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 23717998 - 23718072
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||| |||||||||||||||||  ||||||  |||||||||| |  || | |||||||||||||||||||||    
T  23717998 acggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattata 23718072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 24105670 - 24105744
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||| |||||||||||||||||  ||||||  |||||||||| |  || | |||||||||||||||||||||    
T  24105670 acggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattata 24105744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 403
Target Start/End: Original strand, 28412325 - 28412395
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattat 403  Q
    ||||||||||||||||| ||||||| ||||   ||||||||| |  |||| ||||||||||||||||||||    
T  28412325 gacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 29663983 - 29664057
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaata-acataattcagtgtaattataa 405  Q
    ||||||||||| |||||||||| |||||||   |||||||||| || ||||| | ||||||||||||||||||||    
T  29663983 ggacacgacacagacactgacatgtcgacagtgctaataatttgaaaaaatatatataattcagtgtaattataa 29664057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 379 - 463
Target Start/End: Original strand, 28524447 - 28524532
Alignment:
Q  379 aaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaat 463  Q
    |||| ||||||||||||||||||||| ||| || | | ||||| | |||| |||| ||||||||| ||||||| ||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgtctgacacagaaacacgcctaat 28524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 450
Target Start/End: Original strand, 28677880 - 28677996
Alignment:
Q  330 acggacac-gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcga 428  Q
    |||||||| ||||| |||||||  ||| ||||||  |||||||||| || |||| ||||||||||||||||||||| || |||| |||     | ||| |    
T  28677880 acggacactgacactgacactggaacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgttcggtgtcg-----gtgtcaa 28677974  T
Q  429 acacgacacgtgtccgacacag 450  Q
    |||||||| |||||||||||||    
T  28677975 acacgacaagtgtccgacacag 28677996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 34993985 - 34993924
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||| ||||||||||| |  ||||||||||||| ||||||||  |||||||||    
T  34993985 gtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcat 34993924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 408
Target Start/End: Original strand, 38442289 - 38442357
Alignment:
Q  339 acacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| ||||||||||| || |||||||||| ||||||| |||| |||||||||| | ||||||||||||    
T  38442289 acacgaacactgacacg-cggcacaactaatgatttaaaaaaatcacataattcaatataattataagtg 38442357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 486
Target Start/End: Complemental strand, 2438778 - 2438660
Alignment:
Q  358 gacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacg 457  Q
    |||||| |||||||||| || |||| ||||||||||||||||||| |||||     |||     | |||| ||||||||| |||||||||| |  |||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtg-----tcg-----gtgtcggacacgacacatgtccgacaccgggacacg 2438689  T
Q  458 cctaattctaggagtgtctgtgcttcatt 486  Q
    |||||| | ||||||||| ||||||||||    
T  2438688 cctaatccgaggagtgtccgtgcttcatt 2438660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 408
Target Start/End: Complemental strand, 14996308 - 14996232
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    |||| |||||||||||||||| | ||||||| |||||||||| ||| |||| | |||||| |||||||||| |||||    
T  14996308 gacatgacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtg 14996232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 28596444 - 28596519
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||||| ||||||| |||||   | ||| | || |||||| ||||||||||||||||||    
T  28596444 acggacacgacacggacaatgacacgccgacacagctaat---tgaaaaacatcacataagtcagtgtaattataagtg 28596519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 31808063 - 31808123
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||  ||||||  ||||||||||||  |||| |||||||||||||||||||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattata 31808123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 38117232 - 38117168
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| ||||||| |||||||||| || |||| ||||| ||| ||||||||| |||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtg 38117168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 10548011 - 10547941
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaa--agaaataacataattcagtgtaattata 404  Q
    |||||||||||||||||||||||||||   |||||||||||  | |||| | ||||||||||||| |||||    
T  10548011 acgacacggacactgacacgtcgacaccgttaataatttaaataaaaatcatataattcagtgtagttata 10547941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 404
Target Start/End: Original strand, 19573962 - 19574024
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||| |||||| ||||||   |||||||||||  ||||||||||||||||||||||||||    
T  19573962 acggacac-gacacgccgacaccgataataatttaagaaaataacataattcagtgtaattata 19574024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Original strand, 25543214 - 25543269
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattca 393  Q
    |||||| |||||||||||||||||| | ||||||||| ||||||| | ||||||||    
T  25543214 gacacgaacactgacacgtcgacactaataataatttcaagaaatgatataattca 25543269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 401
Target Start/End: Original strand, 27460011 - 27460070
Alignment:
Q  343 ggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaatt 401  Q
    ||||||||||||| ||||||| |||||||||| ||| |||| |||||||||||| |||||    
T  27460011 ggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtataatt 27460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 408
Target Start/End: Original strand, 33153415 - 33153474
Alignment:
Q  349 tgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||| ||| ||| ||||| ||||||| |||| ||||||||||||||||||| |||||    
T  33153415 tgacacgccgaaacatctaatgatttaaaaaaatcacataattcagtgtaattacaagtg 33153474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 546
Target Start/End: Complemental strand, 36793589 - 36793556
Alignment:
Q  513 tatatgaggatgtagctcagatggtagagcgctc 546  Q
    |||||| |||||||||||||||||||||||||||    
T  36793589 tatatggggatgtagctcagatggtagagcgctc 36793556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 42511385 - 42511324
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| |||| |||||||||||||||||  ||||| ||||| | ||||||||| |||||||||    
T  42511385 gtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcat 42511324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 357 - 420
Target Start/End: Original strand, 974746 - 974810
Alignment:
Q  357 cgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgtt 420  Q
    |||||||||||||||||| || | || |||| |||||||||||||| ||||| |||| |||||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgtt 974810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 5367198 - 5367238
Alignment:
Q  364 actaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||| | ||||| |||||||||||||||||||||    
T  5367198 actaataatttgaggaaatcacataattcagtgtaattata 5367238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 6290127 - 6290203
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||| ||||||||||| |||||| ||||||| |||  ||||||||||||| |||| | ||| || ||| ||||||||    
T  6290127 atacagacacgacacgaacactggcacgtcggcaccgctaataatttaaaaaaattatatattttagtataattata 6290203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 11670741 - 11670789
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattc 392  Q
    ||||||||||||||||| | ||||||||||| || |||| |||||||||    
T  11670741 gacactgacacgtcgacgccactaataatttgaaaaaatcacataattc 11670789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 18622612 - 18622652
Alignment:
Q  364 actaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  18622612 actaataatttaataaaatcacataattcagtgtaattata 18622652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 403
Target Start/End: Complemental strand, 36409717 - 36409641
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattat 403  Q
    ||||| ||||||||||||| ||| ||| | ||||||  || ||||||| || |||| |||||||| |||||||||||    
T  36409717 gatacagacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcacataatttagtgtaattat 36409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 514 - 546
Target Start/End: Complemental strand, 36772474 - 36772442
Alignment:
Q  514 atatgaggatgtagctcagatggtagagcgctc 546  Q
    ||||| |||||||||||||||||||||||||||    
T  36772474 atatggggatgtagctcagatggtagagcgctc 36772442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 241567 - 241722
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||  | |||| |||||||| ||||||||||| |||| |||| ||||||| | |||| |    
T  241567 cggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcgga 241666  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||||| |  ||||||||||| | || |||||| |||||||||    
T  241667 cacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 241722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 3e-31; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 333 - 485
Target Start/End: Original strand, 14216867 - 14217020
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    |||||||||||||||||||||||||||||||||||||||||| || | || | ||||||||||||||||| ||||| | || ||||||||| |||| |||    
T  14216867 gacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggaca 14216966  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||| |||||| |  |||| |||||| | || |||||| |||||||||    
T  14216967 cgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcat 14217020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 333 - 485
Target Start/End: Original strand, 14222996 - 14223149
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    |||||||||||||||||||||||||||||||||||||||||| || | || | ||||||||||||||||| ||||| | || ||||||||| |||| |||    
T  14222996 gacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggaca 14223095  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||| |||||| |  |||| |||||| | || |||||| |||||||||    
T  14223096 cgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcat 14223149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 334 - 485
Target Start/End: Complemental strand, 16000099 - 15999952
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacac 432  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||||| |||| |||     ||  || ||||    
T  16000099 acacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcg-----gacacgtacac 16000005  T
Q  433 gacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||||| |  ||||||||||| | ||||||||| |||| ||||    
T  16000004 gacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcat 15999952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 41961736 - 41961581
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    |||||||||||| |||||||||||| || ||||||||||||||| || | || |||| |||| ||||||||| ||||| |||| ||||||  |  ||| |    
T  41961736 cggacacgacacagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcgga 41961637  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||||| |  ||||||||||| | || |||||| |||||||||    
T  41961636 cacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcat 41961581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 487
Target Start/End: Complemental strand, 4987363 - 4987220
Alignment:
Q  345 acactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtcc 443  Q
    ||||||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| |||||  |||  |||||  | || | |||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtcc 4987264  T
Q  444 gacacagcaacacgcctaattctaggagtgtctgtgcttcatta 487  Q
    ||||| |  ||||||||||| | ||||||||| || ||||||||    
T  4987263 gacaccgggacacgcctaatccgaggagtgtccgtacttcatta 4987220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 15796380 - 15796225
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||| ||||||| |||||||  ||||||||| || |||| | ||||||||||||||||| || || |||| ||||||  | |||| |    
T  15796380 cggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcgga 15796281  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||| |||||||||| |||| | |||||||||||| | | ||||||  |||||||||    
T  15796280 cacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcat 15796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 341 - 485
Target Start/End: Original strand, 28812499 - 28812643
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgt 439  Q
    |||||||| |||||| |||||||||||||||||| ||||||| ||||||||||||||| ||| ||||| |||| ||||||| | |||  |||||| || |    
T  28812499 acggacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 28812597  T
Q  440 gtccgaca-cagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||| |||  ||||||||||| | |||||||||||||| ||||    
T  28812598 gtccgacagcag-gacacgcctaatccgaggagtgtctgtgcctcat 28812643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 55401048 - 55401192
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaac 430  Q
    |||| |||||||||||||||| ||| |||||||||||||||||| || |||| |||||||| |||||||||| |||||     |||     | |||| ||    
T  55401048 cggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtg-----tcg-----gtgtcggac 55401137  T
Q  431 acgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||||||| |  ||||||||||| | ||||||||| |||||||||    
T  55401138 acgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 55401192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 28917974 - 28918120
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||| ||||||||| ||||| | |||||||||| || |||| ||||||||||||||||||| ||||| |||| ||||         | |    
T  28917974 cggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt---------gga 28918064  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||||| |  ||||||||||| | |||||||||  ||||||||    
T  28918065 cacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 3164111 - 3164043
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaa 399  Q
    ||||||||||||||||| || |||||||||||| |||||||||| || |||| ||||||||||||||||    
T  3164111 cggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 400
Target Start/End: Original strand, 10954919 - 10954994
Alignment:
Q  327 gatacggacac--gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaat 400  Q
    |||||||||||  |||||| ||||||||||| |||||||||||||||||| || |||| |||||||||||||||||    
T  10954919 gatacggacaccggacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 331 - 402
Target Start/End: Original strand, 3610606 - 3610677
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||||||||| |||||||||||| | |||||  |||||||||||| ||||||||||| ||||||||||||    
T  3610606 cggacacgacacagacactgacacgccaacacagttaataatttaaaaaaataacataactcagtgtaatta 3610677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 26492294 - 26492215
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||| || |||| | | ||||||||||||||| ||||    
T  26492294 atacggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagt 26492215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 14209105 - 14209203
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgaca 447  Q
    |||||| |||||||||||||||||| || |||| ||||||||||||||||||| ||||| | || ||||||  | |||| ||||||||||||| |||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgaca 14209203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 401
Target Start/End: Original strand, 14979150 - 14979224
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatt 401  Q
    ||||||||||||||| ||||| || |||| ||||||| |||||||||| || |||| ||||||||||||||||||    
T  14979150 gatacggacacgacaaggacaatggcacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 485
Target Start/End: Complemental strand, 34185196 - 34185054
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtc 442  Q
    |||| ||||||| ||||||  |||||||||| || |||| ||| ||||||||||||||| ||||| |||| ||||||    |||| ||| |||| |||||    
T  34185196 gacagtgacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtc 34185097  T
Q  443 cgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| |  ||||||||||| | ||||||||| |||||||||    
T  34185096 cgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 34185054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 8587107 - 8587030
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| |||||||||||||||||| ||||||| ||| |||||| || |||| |||||||| |||||||||| |||||    
T  8587107 cggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtg 8587030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 10335372 - 10335295
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || || | ||||| || ||||||| || |||||    
T  10335372 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtg 10335295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 24205127 - 24205050
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||| ||||||   ||||||||| |  |||| ||||||| |||||||||||||||||    
T  24205127 cggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtg 24205050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 448
Target Start/End: Original strand, 25064882 - 25064998
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaac 430  Q
    |||||||||||| |||| ||||||| ||||||  ||||| |||| || |||| |||||||| |||||||||||  ||  ||||||||||| | |||| ||    
T  25064882 cggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattatgtgt-tggtatcgtgttggtgtcggac 25064980  T
Q  431 acgacacgtgtccgacac 448  Q
    |||||||||||| |||||    
T  25064981 acgacacgtgtctgacac 25064998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 26508079 - 26508160
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||| || || |||||||||  |||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  26508079 gatacggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtg 26508160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 408
Target Start/End: Original strand, 8383231 - 8383307
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||| ||||||| ||||||  |||||||||| |  |||| | |||||||||||||||||||||||    
T  8383231 ggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtg 8383307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 20503451 - 20503515
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| ||||||||| |||||||| || |||| ||||||||||||||||||| |||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtg 20503515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 408
Target Start/End: Original strand, 35312028 - 35312104
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||||| | |||||||||  |||||||||||| |  | ||||||||||||||||||| |||||    
T  35312028 ggacacgacacggacactgatatgtcgacacatttaataatttaaaaatgttacataattcagtgtaattacaagtg 35312104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 444
Target Start/End: Complemental strand, 750705 - 750590
Alignment:
Q  331 cggacacgacacggacact-gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcga 428  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| || | || |||||||||  || ||||| ||||| |||| ||||||  |  |||     
T  750705 cggacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcgg 750606  T
Q  429 acacgacacgtgtccg 444  Q
    ||||||||||||||||    
T  750605 acacgacacgtgtccg 750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 404
Target Start/End: Complemental strand, 11493441 - 11493374
Alignment:
Q  337 cgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||| |||||||||||||| ||||||||| | |  |||| |||||||||||||||||||||    
T  11493441 cgacacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattata 11493374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 25948966 - 25948896
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||| | ||| ||  |||||||||| || |||| |||||||||||||||||||||||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtg 25948896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 35994823 - 35994747
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| ||||| ||||| | ||||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  35994823 cggacacgacatggacaatgacaagccgacacagctaataatttgaa-aaatcacataattcagtgtaattacaagtg 35994747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 408
Target Start/End: Original strand, 9800014 - 9800090
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| ||||||||||| ||||||  |||||||||| |  |||| ||||||||| |||||||| ||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtg 9800090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 10268567 - 10268495
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| ||||||||||||| |||||||  ||||||||| || |||| |||||||| |||||||||| |||||    
T  10268567 acgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtg 10268495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 485
Target Start/End: Original strand, 16789020 - 16789139
Alignment:
Q  366 taataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaatt 464  Q
    |||||||||||| |||| | |||||||||||||||||||||||  ||| |||||| || |||| ||| ||||| ||||| |||| |  |||| |||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaacac-gggacacacctaatt 16789118  T
Q  465 ctaggagtgtctgtgcttcat 485  Q
      ||||||||| |||||||||    
T  16789119 tgaggagtgtccgtgcttcat 16789139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 402
Target Start/End: Original strand, 34910309 - 34910361
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||| |||||||||||||||||| || |||| |||||||||||||||||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 404
Target Start/End: Original strand, 18426932 - 18426995
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||| |||||| |||||| ||||||||||| || |||| ||||||||| |||||||||||    
T  18426932 acggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattata 18426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 406
Target Start/End: Complemental strand, 14840376 - 14840302
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataag 406  Q
    |||||||||||||| || |||||| | |||| | ||||||||| |  |||| |||||||||||||||||||||||    
T  14840376 ggacacgacacggataccgacacgccaacaccattaataatttcagaaaatcacataattcagtgtaattataag 14840302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 21479104 - 21479162
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||||||||| ||||||| |||||||||| || |||| ||| |||||||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 2620140 - 2620071
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaa 399  Q
    ||||||||||| |||||||||||||| |||||| |||||| |||| |  |||| |||||||| |||||||    
T  2620140 acggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaa 2620071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 7171557 - 7171618
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| |||||||||||||||||||| || ||||||||||| | |||||||| | ||||||||    
T  7171557 gtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcat 7171618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 14829663 - 14829739
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| ||||| |||||||||||| ||||||| |||||||||| || |||| ||||||||||  ||||||| |||||    
T  14829663 cggacatgacacagacactgacacgccgacacagctaataatttgaa-aaatcacataattcatggtaattacaagtg 14829739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 340 - 464
Target Start/End: Original strand, 14832081 - 14832206
Alignment:
Q  340 cacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacg 438  Q
    |||||| || |||||| ||| ||| |||||||||| || |||| |||||| ||| |||||||| ||||| | || ||||||  |  ||| ||||||||||    
T  14832081 cacggatacggacacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacg 14832180  T
Q  439 tgtccgacacagcaacacgcctaatt 464  Q
    |||||||||| |  ||||||||||||    
T  14832181 tgtccgacaccgggacacgcctaatt 14832206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 10690300 - 10690194
Alignment:
Q  379 aaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctg 477  Q
    |||| |||||||||||||||||||||  || |||||| || |||| |||| |||| ||||||||| ||||| || |||| |||||| | |||| ||| ||    
T  10690300 aaatcacataattcagtgtaattatatttgtcggtattgt-ttagtgtcggacacaacacgtgtctgacacggcgacacacctaatccgaggaatgtatg 10690202  T
Q  478 tgcttcat 485  Q
    ||||||||    
T  10690201 tgcttcat 10690194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 408
Target Start/End: Original strand, 11610496 - 11610571
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| |||| || ||||||||| | ||||  ||||||||||||| |||| ||||||||||||||| ||| |||||    
T  11610496 gacacaacacagatactgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtg 11610571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 14747547 - 14747606
Alignment:
Q  344 gacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaatta 402  Q
    |||||||||||| ||||||| |||||||||| ||| |||| |||||||| ||||||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaatta 14747606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 404
Target Start/End: Complemental strand, 23870635 - 23870572
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||| |||||||||||||  |||||||||| || |||| | |||||||||||| ||||||    
T  23870635 acggacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgtgattata 23870572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 404
Target Start/End: Complemental strand, 29112356 - 29112293
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||||| ||||| |||||| |||| |  |||| | |||||||||||||||||||    
T  29112356 acggacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 29112293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 4991050 - 4990976
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| ||||||||  ||||||  |||||| ||| |  |||| ||||||||||||||||||| |||||    
T  4991050 acacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtg 4990976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 418
Target Start/End: Complemental strand, 21257058 - 21256984
Alignment:
Q  345 acactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtg 418  Q
    |||| ||||||  |||||| |||||||||| || |||| |||||||||||| |||||| ||||| ||||||||||    
T  21257058 acaccgacacgatgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgtg 21256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 22774149 - 22774079
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| ||||| ||||||||||||| ||||||||||  |  || | ||||| |||||||||||||||||||    
T  22774149 gacacagacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtg 22774079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 485
Target Start/End: Original strand, 27505245 - 27505368
Alignment:
Q  357 cgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaaca 455  Q
    ||||||| ||||||||||  | |||| |||||||| |||||||||| ||||| |||| ||||||  ||      ||||||||||||||||||| |  |||    
T  27505245 cgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctga------cacgacacgtgtccgacaccgggaca 27505338  T
Q  456 cgcctaattctaggagtgtctgtgcttcat 485  Q
     ||||||| | ||||||||| |||||||||    
T  27505339 tgcctaatccgaggagtgtccgtgcttcat 27505368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 38731190 - 38731264
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||| | |||| |||| ||||| ||  |||||||||| || |||| ||||||||||||||| |||||    
T  38731190 acggacacgacatgtacaccgacatgtcgataccgctaataattttaaaaaatcacataattcagtgtagttata 38731264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 546
Target Start/End: Original strand, 35692214 - 35692247
Alignment:
Q  513 tatatgaggatgtagctcagatggtagagcgctc 546  Q
    |||||| |||||||||||||||||||||||||||    
T  35692214 tatatggggatgtagctcagatggtagagcgctc 35692247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 393
Target Start/End: Original strand, 40052318 - 40052367
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattca 393  Q
    |||||||||||| ||||||| |||||||||| || |||| ||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 404
Target Start/End: Complemental strand, 40993409 - 40993348
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaa-taacataattcagtgtaattata 404  Q
    ||||| ||||| |||||||  ||||||||||||| ||| | |||||||||||||||||||||    
T  40993409 gacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattata 40993348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 41319383 - 41319326
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatt 401  Q
    ||||| ||||||||||||| | ||||||||| || |||| |||||||||| |||||||    
T  41319383 gacacggacacgtcgacaccaataataatttgaaaaaatgacataattcaatgtaatt 41319326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 3865635 - 3865599
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataattt 374  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  3865635 gacacggacactgacacgccgacacagctaataattt 3865599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 10318113 - 10318077
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataattt 374  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  10318113 gacacggacactgacacgccgacacagctaataattt 10318077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 11252037 - 11252093
Alignment:
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| ||||||||||| ||  | |||||||||||| | |||||||||||||||||||    
T  11252037 acacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcat 11252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 409
Target Start/End: Original strand, 14618756 - 14618832
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgc 409  Q
    |||||||||||| |||||| |||  |||||  ||||||||||||  |||  ||||||||||||||||| ||| ||||    
T  14618756 gacacgacacgggcactgagacgctgacacccctaataatttaagaaaaccacataattcagtgtaataatatgtgc 14618832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 408
Target Start/End: Complemental strand, 15505875 - 15505799
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaa-taacataattcagtgtaattataagtg 408  Q
    |||||||||  || || ||||||| || |||| |||||||||||| ||| | | |||||||||||||||||||||||    
T  15505875 gacacgacatagatacagacacgttgatacaattaataatttaaaaaaaattatataattcagtgtaattataagtg 15505799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 32400807 - 32400731
Alignment:
Q  317 atgaagccttgatacggacacga-cac-ggacactgacacgtcgacacaactaataatttaaagaaataacataatt 391  Q
    ||||||| | ||||||||||||| ||| ||||||||||||| ||||||| |||||||||| || | || ||||||||    
T  32400807 atgaagcatggatacggacacgaacaccggacactgacacggcgacacagctaataatttgaaaagattacataatt 32400731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 39756222 - 39756286
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| ||||| || |||||||||||| |||| |||||||| | | |||||| |||||    
T  39756222 gacactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagtg 39756286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 4e-30; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 21522723 - 21522878
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||| || || |||| ||||||  | |||| |    
T  21522723 cggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcgga 21522822  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||| ||| |  ||||||||||| | | ||||||| |||| ||||    
T  21522823 cacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcat 21522878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 21533289 - 21533444
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||| || || |||| ||||||  | |||| |    
T  21533289 cggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcgga 21533388  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||| ||| |  ||||||||||| | | ||||||| |||| ||||    
T  21533389 cacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcat 21533444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 485
Target Start/End: Original strand, 21542005 - 21542158
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    |||||||||| |||| ||||| | ||||||||||||||||||||| | |||||||||||||||||||||| ||||| |||| ||||||  | |||| |||    
T  21542005 gacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 21542104  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||| |  ||||||| ||| | |||| |||| |||| ||||    
T  21542105 cgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcat 21542158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 331 - 483
Target Start/End: Complemental strand, 36642848 - 36642696
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||||||||||| |||||||  ||||||||| || || | ||||| || ||||||| |||||||| |||| || |||| | |||| |    
T  36642848 cggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtcatgttggtgtcgga 36642749  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttc 483  Q
    ||||||||||||||||||| |  ||||||||||||  ||||||||| |||||||    
T  36642748 cacgacacgtgtccgacac-gggacacgcctaattggaggagtgtcggtgcttc 36642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 341 - 485
Target Start/End: Original strand, 39698524 - 39698669
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgt 439  Q
    |||||||||||||||  |||||| |||||||||| || |||| ||||||||||||||||||| ||||| | || ||||||  | |||| |||||||| ||    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgt 39698623  T
Q  440 gtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     |||||||| |  ||||||||||| | ||||||||| |||||||||    
T  39698624 atccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 39698669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 21191142 - 21191065
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||| | ||||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  21191142 cggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtg 21191065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 22013387 - 22013461
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataa 405  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||  | |||| |||||||| |||||||||||||    
T  22013387 cggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 6247595 - 6247672
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||| ||| ||||||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  6247595 cggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtg 6247672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 13287485 - 13287408
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||| |||||||||||||  ||||||||| || |||| |||||||||||||||| || |||||    
T  13287485 cggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtg 13287408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 14422873 - 14422951
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    ||||||||||||||| ||||||||||||  ||| ||| ||||||||||||  |||| ||||||||||||||||||||||||    
T  14422873 gatacggacacgacaaggacactgacacaccgatacagctaataatttaa--aaatcacataattcagtgtaattataagt 14422951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 483
Target Start/End: Original strand, 30183535 - 30183675
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtc 442  Q
    |||||||| | | |||||||||||||||||| || | || |||| |||| || |||||| ||||| |||| ||||||| |  ||  ||||||||||||||    
T  30183535 gacactgatatgccgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtc 30183634  T
Q  443 cgacacagcaacacgcctaattctaggagtgtctgtgcttc 483  Q
    |||||| |  ||||||||||||| || ||||||||||||||    
T  30183635 cgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 6401471 - 6401626
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||| |||||||||||| |||||| ||||||||||||   ||| |  |||| ||| ||| ||||||||||||| ||| |||| |||||| || |||| |    
T  6401471 cggacgcgacacggacaccgacacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcgga 6401570  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||| ||||| |  | |||||| || | ||||||||| |||||||||    
T  6401571 cacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcat 6401626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 14674249 - 14674319
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||||| |||||||||| || |||| |||||||| |||||||||| |||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 14674319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 416
Target Start/End: Complemental strand, 24906387 - 24906301
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcg 416  Q
    ||||||||||||| ||||||||||| | |||||  ||||||||| || |||| ||||||||||||||||||| ||||| ||||||||    
T  24906387 cggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcg 24906301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 43001780 - 43001850
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||| ||||||||  |||||||||| || |||| ||||||||||||||||||| |||||    
T  43001780 gacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtg 43001850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 408
Target Start/End: Original strand, 33178014 - 33178075
Alignment:
Q  347 actgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||| |||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtg 33178075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 485
Target Start/End: Original strand, 3966488 - 3966631
Alignment:
Q  343 ggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgt 441  Q
    ||||||||||| | ||||||  |||||||||| |  |||| ||| ||||||||||||||||| ||| |||| |||||| || |||| |||| ||| ||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgt 3966587  T
Q  442 ccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    || ||| ||  ||||| ||||| | ||||||||| |||||||||    
T  3966588 ccaacagagggacacgtctaatccgaggagtgtccgtgcttcat 3966631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 485
Target Start/End: Original strand, 31084309 - 31084445
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtc 442  Q
    |||||||||||| ||||||| |||||||||| || |||| |||||||||| |||||||| ||||| || | ||||      |||| ||||||||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgt------gtcggacacgacacgtgtc 31084402  T
Q  443 cgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| |  ||| ||||||| | ||||||||| ||| |||||    
T  31084403 cgacactgggacatgcctaatccgaggagtgtccgtggttcat 31084445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 7218334 - 7218276
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| | ||||||||||||| |||| ||||||||||||||||||| |||||    
T  7218334 gacacgtcgacagagctaataatttaaataaatcacataattcagtgtaattacaagtg 7218276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 41995449 - 41995515
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||| |||||||||||| |||||||||||||||||  || |||| |||||||||| ||||||||    
T  41995449 acgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 6326383 - 6326306
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||| |||||   ||| |||||| |  |||| ||||||||||||||||||| |||||    
T  6326383 cggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtg 6326306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 6770523 - 6770588
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattat 403  Q
    |||||||||||||||||   |||||||||||||||||||  |||| ||||||||||||||| ||||    
T  6770523 gacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgtacttat 6770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 485
Target Start/End: Original strand, 7677704 - 7677833
Alignment:
Q  357 cgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaaca 455  Q
    ||||||| |||||||||| || |||| ||||||||||||| ||||| ||||| |||| ||||||  | |||  ||||| ||| |||||||||| |  |||    
T  7677704 cgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggaca 7677803  T
Q  456 cgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||| | ||||| ||| |||||||||    
T  7677804 cgcctaatccgaggagagtcggtgcttcat 7677833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 4105230 - 4105309
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt--aaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| |||||||| ||||||||| ||||| ||||||||||||  ||| | || ||||||||||||||||||| |||||    
T  4105230 cggacatgacacggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtg 4105309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 15382450 - 15382529
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt--aaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||  ||| |||| | |||||||||| |||||| |||||    
T  15382450 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtg 15382529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 19552626 - 19552562
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgta 398  Q
    |||||||||||||||||||||| |||||||  ||||||||| || |||| |||||||| ||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 474
Target Start/End: Original strand, 19579682 - 19579818
Alignment:
Q  339 acacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacac 437  Q
    ||||||||||||| ||| ||||||| |||||||||| |  |||| |||||||| |||| ||||| ||||| |||| |||||| || |||| ||||||||     
T  19579682 acacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacat 19579781  T
Q  438 gtgtccgacacagcaacacgcctaattctaggagtgt 474  Q
     ||||  |||| |  ||||||||||| | ||||||||    
T  19579782 atgtctaacaccgggacacgcctaatccgaggagtgt 19579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 8419994 - 8420077
Alignment:
Q  327 gatacggacacg-acac-ggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| |||| ||||| ||||||| ||||| | |||||||||| || ||||||||||||||| |||||||| |||||    
T  8419994 gatacggacacggacaccggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtg 8420077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 400
Target Start/End: Complemental strand, 15410532 - 15410465
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaat 400  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||  |||| | || ||||||||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaat 15410465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 30135285 - 30135364
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||| || || |||||| |||||||||||||||||| ||| |||| |||||| ||| |||||||| |||||    
T  30135285 acggacacgacacagataccgacacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtg 30135364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 21576824 - 21576754
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| ||||||| ||| | ||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  21576824 gacacgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtg 21576754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 404
Target Start/End: Original strand, 27144443 - 27144509
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||| |||||||||||| ||||||  |||||||||| | ||||| |||||||| ||||||||||||    
T  27144443 gacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattata 27144509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 41633705 - 41633779
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||||||| |||| || ||||||||  ||||||| |||||||||| || || | |||||||||||||||||||    
T  41633705 atacggacaccacacagatactgacactccgacacagctaataatttgaaaaatttacataattcagtgtaatta 41633779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 15405138 - 15405064
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||   ||||||||||||||||| || |||| | |||||||| |||||||| |||||    
T  15405138 ggacacgacacggacactaacact--gacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtg 15405064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 21351979 - 21351914
Alignment:
Q  343 ggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||  |||||||||||||||||  || || | ||||||||||||||||||| |||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtg 21351914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 40000616 - 40000555
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgt 397  Q
    |||||||||||||||||| ||||||||   ||||||||| || |||| ||||||||||||||    
T  40000616 acgacacggacactgacatgtcgacactcttaataatttgaaaaaatcacataattcagtgt 40000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 442
Target Start/End: Complemental strand, 3752015 - 3751904
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||||| |  |||| |||||| | ||| |||||||| |||   ||||||||| || || |||    
T  3752015 cggacacgacacgaacactaacaagtcgacac-actaataatttgagaaaatcacataactaagtataattatatgtgttagtatcgtgtcagtgttgaa 3751917  T
Q  430 cacgacacgtgtc 442  Q
    |||||||||||||    
T  3751916 cacgacacgtgtc 3751904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 6035469 - 6035528
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||| ||||||  |||||||||| | ||||||| |||||||||||||||||||    
T  6035469 gacactgacacgccgacaccgctaataatttga-gaaataatataattcagtgtaattata 6035528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 485
Target Start/End: Original strand, 30098310 - 30098454
Alignment:
Q  342 cggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtg 440  Q
    |||||||||||||| ||| ||   ||||||||| |  |||| |||||||||| ||||||||||  || |||||||| || || |||| ||||||||||||    
T  30098310 cggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtg 30098409  T
Q  441 tccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    || |||||    |||| |||||| | |||| |||| |||||||||    
T  30098410 tcagacaccaggacacacctaatccgaggaatgtccgtgcttcat 30098454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 404
Target Start/End: Complemental strand, 14574133 - 14574062
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||  |||| |||||| |||||| | ||||||||| | ||||| | |||||||||||||||||||    
T  14574133 gacacgacacaaacaccgacacgccgacacgagtaataatttgatgaaatgatataattcagtgtaattata 14574062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 408
Target Start/End: Original strand, 10298553 - 10298619
Alignment:
Q  342 cggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||| ||||| |||||||||||||||||| || || | ||||||| || |||||||| |||||    
T  10298553 cggacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 10298619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 25888380 - 25888303
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataattt--aaagaaataacataattcagtgtaattataagt 407  Q
    |||||||||||||| || |||||  | |||| |||||||||||  ||| |||| | ||||||||||||||||||||||    
T  25888380 ggacacgacacggatacagacacaccaacactactaataattttaaaaaaaatcatataattcagtgtaattataagt 25888303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 408
Target Start/End: Original strand, 31264421 - 31264488
Alignment:
Q  339 acacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||  |||| ||||||||| ||||||||| |  |||| ||||||||||||||||| |||||||    
T  31264421 acacggacac--acacatcgacacaagtaataatttgagaaaatgacataattcagtgtaatcataagtg 31264488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 393
Target Start/End: Complemental strand, 41558769 - 41558707
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattca 393  Q
    |||| ||||||||||||||||||| | ||||||| ||||||||| |  |||| ||||||||||    
T  41558769 cggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 41558707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 21576748 - 21576687
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| |||||||||||||| ||||| |  ||||||||||| | ||||||||| |||||||||    
T  21576748 gtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcat 21576687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 25863177 - 25863254
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| ||||  ||||||||||||    ||||||||| |  |||| | |||||||||||||||||||||||    
T  25863177 cggacacgacacagacatcgacacgtcgacatgtataataatttgagaaaatgatataattcagtgtaattataagtg 25863254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 27932291 - 27932352
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| |||||||||||||| |||||    ||||||||||||| |||||||| ||||||||||    
T  27932291 gtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcat 27932352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 42893345 - 42893410
Alignment:
Q  343 ggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| |||||  ||||||| |||||||||| || |||| ||||||| ||||||||||| |||||    
T  42893345 ggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtg 42893410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 401
Target Start/End: Original strand, 12641657 - 12641717
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatt 401  Q
    ||||||| ||||||||||||| |  |||||||||||| |||| |||||||| ||| |||||    
T  12641657 acggacaatgacacgtcgacatagttaataatttaaaaaaatcacataatttagtataatt 12641717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 37328927 - 37328859
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||||||||||||||| ||  ||||||| | ||||||||  | |||| ||| |||||||||||||||    
T  37328927 acacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaatta 37328859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 40131624 - 40131668
Alignment:
Q  361 acaactaataatttaaagaaataacataattcagtgtaattataa 405  Q
    |||||||||||||| || |||| |||||||||||| |||||||||    
T  40131624 acaactaataatttgaaaaaatcacataattcagtttaattataa 40131668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 42488136 - 42488068
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||||| |||||||||||||||||||   | |||||||||  |||| | |||||||| ||||||||    
T  42488136 acacgacacagacactgacacgtcgacaccgttgataatttaataaaattatataattcaatgtaatta 42488068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 6e-29; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 341 - 485
Target Start/End: Complemental strand, 15816205 - 15816060
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgt 439  Q
    ||||||||||||||| |||||||||||||||||| || |||| |||||||| |||||||||||||||| |||| ||||||| | |||| ||||||||||     
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacga 15816106  T
Q  440 gtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     |||||||| |  ||||||||||| | || |||||| |||||||||    
T  15816105 atccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 15816060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 22651949 - 22652104
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| || |||| |||||||||| | |||||| ||||| |||| ||||||  | |||| |    
T  22651949 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcgga 22652048  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||| ||||||||||| |  ||||| ||||| | ||||||||| |||||||||    
T  22652049 cacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 22652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 29510390 - 29510235
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| || |||| ||| |||||||| |||||| ||||| |||| | ||||  | |||| |    
T  29510390 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcgga 29510291  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| |||||||||||| |  |||| |||||| | ||||||||| |||||||||    
T  29510290 cacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 29510235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 445
Target Start/End: Complemental strand, 2572141 - 2572027
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaac 430  Q
    |||||||||||||| || |||||||||||||| |||||||||| || |||| |||||||| |||||||||| ||||| |||| ||||||  | |||| ||    
T  2572141 ggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggac 2572042  T
Q  431 acgacacgtgtccga 445  Q
    |||||||||||||||    
T  2572041 acgacacgtgtccga 2572027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 4673511 - 4673356
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt-gcggtatcgtgttagagtcgaa 429  Q
    |||||||||||| |||||||||||| |||||||  ||||||||| || |||| | | ||||||||||||||| ||||  | || || ||||   |||| |    
T  4673511 cggacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtcttgttgatgtcgga 4673412  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| | | |||||||| | |||||||||||| | |||||||||||||||||||    
T  4673411 cacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcat 4673356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 22595981 - 22596044
Alignment:
Q  345 acactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtg 22596044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 41838207 - 41838144
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtg 396  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  41838207 gacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 36450833 - 36450763
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| |||||||||||||||||| || |||| ||| ||||||||||||||| |||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtg 36450763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 25192433 - 25192356
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||| || || | |||||||||||| ||||||||||||    
T  25192433 cggacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtg 25192356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 408
Target Start/End: Original strand, 20873039 - 20873119
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||||||||||||| ||||| |  ||||||||| || |||| |||||||| |||||||||| |||||    
T  20873039 atacggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtg 20873119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 485
Target Start/End: Complemental strand, 29447177 - 29447041
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacac 448  Q
    ||||||||||||||||||||||||| |  |||| |||||||||| ||||| || ||||| |||| || |||  | |||| |||||||| ||||| |||||    
T  29447177 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacac 29447078  T
Q  449 agcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
        ||||||||||| ||||||||||| |||||||||    
T  29447077 caggacacgcctaatcctaggagtgtccgtgcttcat 29447041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 8343289 - 8343444
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    |||||||||||| ||||| |||||  ||||| | |||||||||| || |||| |||||||| |||||||||| ||||| | || ||||    | |||  |    
T  8343289 cggacacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccga 8343388  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||||| |  ||||||||||| | | |||||||||||||||||    
T  8343389 cacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcat 8343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 485
Target Start/End: Original strand, 21465412 - 21465540
Alignment:
Q  358 gacacaactaataatttaaagaaataacataattcagtgtaattataagtgc-ggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacac 456  Q
    |||||| |||||||||| || |||| | |||||||  |||||||| |||||  ||| |||||| || |||| ||||||||||||||| ||||||  | ||    
T  21465412 gacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatac 21465511  T
Q  457 gcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||  ||||||||| |||||||||    
T  21465512 gcctaatttgaggagtgtccgtgcttcat 21465540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 3677761 - 3677832
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||| |||||||| ||||||||| ||||||||| || |||| |||||||||  ||||||||||    
T  3677761 gacacgacacggatactgacacatcgacacaattaataattttaaaaaatcacataattctatgtaattata 3677832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 402
Target Start/End: Complemental strand, 18170564 - 18170497
Alignment:
Q  335 cacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||||||||||||||||| |||||||| ||| ||||| || |||| |||||||||| ||||||||    
T  18170564 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaatta 18170497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 402
Target Start/End: Complemental strand, 18634132 - 18634065
Alignment:
Q  335 cacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||||||||||||||||| |||||||| ||| ||||| || |||| |||||||||| ||||||||    
T  18634132 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaatta 18634065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 24669405 - 24669483
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||| ||||||||||||  |||||   ||||||||| | ||||| ||||||||||||||||||| |||||    
T  24669405 acggacacgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtg 24669483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 36934646 - 36934716
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||||| ||||||||||||  |||||||||  || |||| |||||||||| ||||||||||    
T  36934646 acacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattata 36934716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 7472605 - 7472528
Alignment:
Q  328 atacggacacgacacggacactgacacgt-cgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||| ||||||| |||||||  | |||||| ||||||||||||||||||| |||||| | ||||||||||||    
T  7472605 atacggacacaacacggaaactgacatattcgacaccactaataatttaaagaaatcacataaattagtgtaattata 7472528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 22204622 - 22204691
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaa-ata-acataattcagtgtaattataagtg 408  Q
    ||||||||||||||| ||||||||||||||||||||| || ||| | ||||||||||||||||| |||||    
T  22204622 acggacactgacacgccgacacaactaataatttaaaaaatatatatataattcagtgtaattacaagtg 22204691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 404
Target Start/End: Complemental strand, 4786411 - 4786351
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||| |||||| | |||||||||||  |||| |||||||||||||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattata 4786351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 408
Target Start/End: Original strand, 18407690 - 18407769
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||| ||||||||||| |||| |||| | ||||||| ||||||||| ||| |||| ||||||||||||||||||| |||||    
T  18407690 atactgacacgacacg-acacagacatgccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtg 18407769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 30271366 - 30271299
Alignment:
Q  342 cggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgc 409  Q
    |||||||||||||| ||||||| ||||| |||| || |||| ||||||| ||||||||||| ||||||    
T  30271366 cggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgc 30271299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 404
Target Start/End: Original strand, 34897068 - 34897131
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||| |||||||||||||  |||||||||| |  |||| |||||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattata 34897131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 393
Target Start/End: Complemental strand, 13437050 - 13436988
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattca 393  Q
    |||||| |||| ||||||||||||| ||||||| |||||||||| || |||| ||||||||||    
T  13437050 cggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 404
Target Start/End: Original strand, 14134679 - 14134745
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||| ||||| ||||||||||||  ||||||||||| |  |||| |||||||||||||||||||||    
T  14134679 gacaccgacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattata 14134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 24727837 - 24727768
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataattt--aaagaaataacataattcagtgtaatt 401  Q
    |||||||||  ||||||||||||| ||||||||||||||||  ||| |||| ||||||| ||||||||||    
T  24727837 acacgacacatacactgacacgtcaacacaactaataatttgaaaaaaaattacataatgcagtgtaatt 24727768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 486
Target Start/End: Original strand, 44067491 - 44067645
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaacac 432  Q
    ||||| |||| |||||||||||| ||||||   ||||||||| |  |||| ||||||| |||||||||||||||||  || |||   | | |||| ||||    
T  44067491 gacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtcgtgtcggacac 44067590  T
Q  433 -gacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcatt 486  Q
     ||  ||||||||||||    ||||||||||||| ||||||||| ||||||||||    
T  44067591 tgatgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcatt 44067645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 926874 - 926797
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||| | ||||  |||||||||| |  ||||  |||  |||||||||||||||||||    
T  926874 cggacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtg 926797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 22197828 - 22197751
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| |||||| ||||| | ||||| |||||||||| || || | |||||||| |||||||||| |||||    
T  22197828 cggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtg 22197751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 27213520 - 27213593
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||| || |||||| ||||||  |||||||||| |  |||| |||||||||| ||||||||||    
T  27213520 cggacacgacacggatacagacacgccgacactgctaataatttcagaaaatcacataattcactgtaattata 27213593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 20679468 - 20679404
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||| ||||||||  |||||||||| |  |||| ||||| |||||||||||||||||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtg 20679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 29776006 - 29776082
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||| ||||||||||||| ||||| ||||||||  |||||||||| |  |||| || ||||||||| ||||||||    
T  29776006 atacggtcacgacacggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataattata 29776082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 407
Target Start/End: Original strand, 31556970 - 31557045
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    |||||| |||| || |||||||||| |||||||  ||||||||| || |||| ||||||||||||||||||| ||||    
T  31556970 cggacatgacatggtcactgacacgccgacacagttaataatttgaa-aaatcacataattcagtgtaattacaagt 31557045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 483
Target Start/End: Original strand, 5813648 - 5813707
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttc 483  Q
    |||| |||||||||||||||||||| |  ||||||||||||  ||||||||| |||||||    
T  5813648 gtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 13203616 - 13203687
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||  ||||||| ||||| |||  ||||||||||| |  |||| |||||||||||||||||||||    
T  13203616 gacacgacacaaacactgatacgtcaacaacactaataatttgagaaaattacataattcagtgtaattata 13203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 420
Target Start/End: Original strand, 25566841 - 25566904
Alignment:
Q  358 gacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgtt 420  Q
    |||||| |||||||||| || |||| ||||||||||||||||||| ||||| |||| |||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtt 25566904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 26902213 - 26902106
Alignment:
Q  379 aaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctg 477  Q
    |||| ||||||||||||||||||||| ||| |||| |||| | || |||| |||||||||||||| | ||| |  |||||||| ||   ||||||||| |    
T  26902213 aaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccg 26902114  T
Q  478 tgcttcat 485  Q
    ||||||||    
T  26902113 tgcttcat 26902106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 28745471 - 28745626
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||| | ||| || |||||||  |||||||||| || || | |||||||||| ||||| || || || || | ||||||  | |||| |    
T  28745471 cggacacgacacggataatgatacatcgacactgctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcgga 28745570  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||| |||||| ||| |  ||| | ||||||| ||||||||| |||||||||    
T  28745571 cacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcat 28745626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 408
Target Start/End: Complemental strand, 4298973 - 4298895
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||| || ||| ||||| |||||||  ||||||||| || |||| |||||||| | |||||||| |||||    
T  4298973 acggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtg 4298895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 400
Target Start/End: Original strand, 24857982 - 24858054
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt---aaagaaataacataattcagtgtaat 400  Q
    |||||||||||||||||  |||||| |||||||  |||||||||   ||| |||| |||||||||||||||||    
T  24857982 cggacacgacacggacatggacacgccgacacagttaataatttgaaaaaaaaatcacataattcagtgtaat 24858054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 4948657 - 4948702
Alignment:
Q  363 aactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| || |||| ||||||||||||||||||| |||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtg 4948702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 9414965 - 9414884
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| || ||||||| ||||||||||   ||||| || |||||||| |||  ||| ||||||||||||| |||||||||||    
T  9414965 gatacagatacgacacagacactgacataccgacataattaataattaaaaataatcacataattcagtgcaattataagtg 9414884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 24362288 - 24362215
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||| ||||||| ||||| |||||| ||||||  |||||||||| |   ||| |||||||||||||||||||||    
T  24362288 cggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattata 24362215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 36450757 - 36450696
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| ||||||| ||||||||||||    ||||||||||| | |||||||||||||||||||    
T  36450757 gtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcat 36450696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 485
Target Start/End: Complemental strand, 3951534 - 3951478
Alignment:
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||| ||||| | |||||||||||| | |||||| || |||||||||    
T  3951534 acacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcat 3951478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 485
Target Start/End: Complemental strand, 11927137 - 11927017
Alignment:
Q  366 taataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaatt 464  Q
    ||||||||| |  |||| ||||||||||||||||||||| ||| |||| ||||||| | |||  |||||||| || ||| |||  |  |||||||||||     
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcgagacacgcctaatc 11927038  T
Q  465 ctaggagtgtctgtgcttcat 485  Q
    | | ||||||| |||||||||    
T  11927037 cgatgagtgtccgtgcttcat 11927017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 485
Target Start/End: Original strand, 11944641 - 11944793
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacac 432  Q
    ||||||||||||  || ||||| ||||||   ||||||||| |  |||| |||||| |||||||||||||| ||| |||| |||||||   |||  ||||    
T  11944641 acacgacacggatgctaacacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacac 11944740  T
Q  433 gacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| || |||||||| |  ||||||||||| | | ||||||  |||||||||    
T  11944741 gacatgtatccgacaccgagacacgcctaatccgatgagtgttcgtgcttcat 11944793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 12570593 - 12570521
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||| || ||||| ||||||| |||||  ||||||||||||  |||  |||||||| ||||||||||||    
T  12570593 ggacacgatacagacaccgacacgttgacactgctaataatttaagaaaaacacataattaagtgtaattata 12570521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 28642381 - 28642449
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaa 399  Q
    ||||||||||||||||| |||||| | |||||   ||||||||| || || | ||||||||||||||||    
T  28642381 cggacacgacacggacaatgacacattgacacggttaataatttgaaaaatttacataattcagtgtaa 28642449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 514 - 546
Target Start/End: Original strand, 38085944 - 38085976
Alignment:
Q  514 atatgaggatgtagctcagatggtagagcgctc 546  Q
    ||||| |||||||||||||||||||||||||||    
T  38085944 atatggggatgtagctcagatggtagagcgctc 38085976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 8365603 - 8365450
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    ||||||||||||||||||||||| |||||||||||||||||| || | || ||||||||| ||||||||| ||||| |||| ||||||  |  ||| |||    
T  8365603 gacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggaca 8365504  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||| |  ||||||||||| | |||||| || |||||||||    
T  8365503 cgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcat 8365450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 16766670 - 16766825
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| ||||| |||| ||||||  | |||| |    
T  16766670 cggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcgga 16766769  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||| ||||||||||||||| |  ||||||||||| | | || |||| |||||||||    
T  16766770 cacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcat 16766825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 330 - 485
Target Start/End: Original strand, 12696296 - 12696446
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcga 428  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| ||||| | || ||||      ||||     
T  12696296 acggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgt------gtcgg 12696389  T
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||| ||||| |  |||| ||| || | |||||||||||||||||||    
T  12696390 acacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 408
Target Start/End: Original strand, 16833266 - 16833358
Alignment:
Q  316 aatgaagccttgatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||  ||||||||||||||||| |||||||||||| |||||||||||||||||| || |||| ||||| ||||||||||||| |||||    
T  16833266 aatgaagcactgatacggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtg 16833358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 330 - 408
Target Start/End: Complemental strand, 8777060 - 8776982
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||||||||||| |||||||||||||||||| || |||| ||| ||||||||||||||| |||||    
T  8777060 acggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtg 8776982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 10770764 - 10770683
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||| ||||||||||||| | |||||||||||||||| || |||| ||||||||||||||||||| |||||    
T  10770764 gatacggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 10770683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 34595107 - 34595184
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||||||||||||| |||||    
T  34595107 cggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 34595184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 9107456 - 9107301
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||| || |||| ||| ||||||||||||||| ||||| |||| ||||||  | |||| |    
T  9107456 cggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcgga 9107357  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||| ||  ||||||||||| |  |||| |||||| | ||||||| | |||||||||    
T  9107356 cacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcat 9107301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 9658854 - 9658925
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||  |||| |||||||||||||||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 13851712 - 13851782
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||||||||||||||||||  |||||||||| |  ||||||| ||||||||||||||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattata 13851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 17435171 - 17435249
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| |||||||||||||||| ||||||||| | |||||||||| || |||| ||||||||||||||||||| |||||    
T  17435171 acggatacgacacggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagtg 17435249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 3398595 - 3398667
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    |||||||||||||||||||||| ||||||| |||||||||| || |||| | ||||||||||||||||||||||    
T  3398595 acacgacacggacactgacacgccgacacagctaataatttgaa-aaatcatataattcagtgtaattataagt 3398667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 7938089 - 7938166
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||| || |||| | |||||| ||||||||||||||||    
T  7938089 cggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtg 7938166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 485
Target Start/End: Original strand, 31384923 - 31385047
Alignment:
Q  361 acaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcc 459  Q
    |||||||||||||| || |||| ||||||||||||||||||| ||||| | || ||||| ||| || | ||||||||||||||| |||| |  |||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtg-tagtgttggacacgacacgtgtcctacaccgggacacgcc 31385021  T
Q  460 taattctaggagtgtctgtgcttcat 485  Q
    |||| | ||||||||| |||||||||    
T  31385022 taatccaaggagtgtccgtgcttcat 31385047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 3209355 - 3209516
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg-------cggtatcgtgttag 422  Q
    ||||||||||||| |||| |||||| ||||||| |||||||||| ||| |||| |||||||| ||||| |||| |||||       |||| |||||| ||    
T  3209355 cggacacgacacg-acacagacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcggtgtcgtgtcag 3209453  T
Q  423 agtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     ||||||||||||||| |||||||||    ||||||||||| | |||||||| ||||||||||    
T  3209454 tgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcat 3209516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 7977915 - 7977839
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||| ||| ||||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  7977915 ggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtg 7977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 408
Target Start/End: Complemental strand, 15489816 - 15489741
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| ||||||||||| |||||||||||||||||||||||| || |||| ||| |||||| |||||||| |||||    
T  15489816 gacacaacacggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtg 15489741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 17841668 - 17841598
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||||| |||||||||| || |||| |||||||| |||||||||| |||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 426600 - 426523
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||| |||||||  ||||||||| || |||| |||||||| | |||||||| |||||    
T  426600 cggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtg 426523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 853945 - 853868
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||  |||||||| |||||||||||||||||| || |||| |||||||| |||| ||||| |||||    
T  853945 cggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtg 853868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 1681734 - 1681808
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||  ||||| ||||| |||||||||||||||||| || |||| || |||||||||||||||| |||||    
T  1681734 acacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtg 1681808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 28152079 - 28152148
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||| | |||||||||| || |||| ||||||||||||||||||| |||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttgaa-aaatcacataattcagtgtaattacaagtg 28152148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 31959131 - 31959209
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||| |||||| ||||||||||| || |||| |||||||||| || |||| ||||||| ||||||||||| |||||    
T  31959131 acggacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtg 31959209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 9027151 - 9027224
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||||||||||||| ||||||  |||||||||| |   ||| ||||||||| |||||||||||    
T  9027151 cggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattata 9027224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 17341746 - 17341673
Alignment:
Q  335 cacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||| |||||||||| ||||||   ||||||||| |  |||| |||||||||||||||||||||||||    
T  17341746 cacgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtg 17341673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 13360457 - 13360385
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||| ||| |||| ||||||||||||| |||| |||||| |  |||| |||||||||||||||||||||    
T  13360457 ggacacgatacgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattata 13360385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 408
Target Start/End: Complemental strand, 7801228 - 7801165
Alignment:
Q  345 acactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| ||||| |||||||||||||||||| || |||| ||||||||||| ||||||| |||||    
T  7801228 acactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtg 7801165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 463
Target Start/End: Original strand, 9522898 - 9522997
Alignment:
Q  365 ctaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaat 463  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||| |||| | ||||  | |||| |  ||||||||||||||||| |  |||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaat 9522997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 405
Target Start/End: Complemental strand, 16388311 - 16388245
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataa 405  Q
    |||||||||||||||||||||| | | | |||||||| || |||| ||||||||||||||||||||||    
T  16388311 gacacggacactgacacgtcgata-agcaaataatttgaaaaaatcacataattcagtgtaattataa 16388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 17302536 - 17302607
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| |||||||||||  ||||||||||||||||| ||| |||| |||||||||| |||||||| |||||    
T  17302536 gacacgaacactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtg 17302607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 402
Target Start/End: Complemental strand, 5970181 - 5970123
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||| ||||||||||||||  ||||||||| || |||| |||||||||||||||||||    
T  5970181 gacacggacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaatta 5970123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 408
Target Start/End: Complemental strand, 6898368 - 6898290
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||| | |||||||||||||  |||||  |||||||||| || |||| |||||||| |||||||||| |||||    
T  6898368 acggacacgatatggacactgacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtg 6898290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 1532214 - 1532286
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaac--taataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||  ||||||||||||||||||| |  ||||||||| |  |||| |||||||||||||||||||||    
T  1532214 acacgacacaaacactgacacgtcgacacaccgctaataatttgataaaattacataattcagtgtaattata 1532286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 350 - 485
Target Start/End: Original strand, 8713971 - 8714108
Alignment:
Q  350 gacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgaca 447  Q
    ||||||||||||||  ||||||||| ||| |||| ||||||||||||||||||| || ||  ||| ||||||  | |||| ||||||||| | |||||||    
T  8713971 gacacgtcgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgaca 8714070  T
Q  448 cagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
      |  ||||||| ||| | |||||||||| ||||||||    
T  8714071 tcgggacacgcccaatccgaggagtgtctttgcttcat 8714108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 17327653 - 17327592
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| |||||||||||||| |||||||  ||||||||||| | ||||||||| |||||||||    
T  17327653 gtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcat 17327592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 448
Target Start/End: Complemental strand, 25038152 - 25038039
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacga 434  Q
    ||||||| || |||||||||| |||||   ||||||||| |  |||| |||||||| |||||||||| || || |||||| ||||| | |||  ||||||    
T  25038152 acgacacagatactgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacga 25038053  T
Q  435 cacgtgtccgacac 448  Q
    ||||||||||||||    
T  25038052 cacgtgtccgacac 25038039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 510 - 546
Target Start/End: Complemental strand, 7442017 - 7441981
Alignment:
Q  510 aaatatatgaggatgtagctcagatggtagagcgctc 546  Q
    ||||||||| |||||||||||||||||||||||||||    
T  7442017 aaatatatggggatgtagctcagatggtagagcgctc 7441981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 13789124 - 13789200
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||||||||  |||||||||||||| ||||   |||||| |||| | | ||| |||||||||||||    
T  13789124 atacggacacgacacggacatcgacacgtcgacacagctaaatttttaaaaaaatcataaaatgcagtgtaattata 13789200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 13797743 - 13797819
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||||||||  |||||||||||||| ||||   |||||| |||| | | ||| |||||||||||||    
T  13797743 atacggacacgacacggacatcgacacgtcgacacagctaaatttttaaaaaaatcataaaatgcagtgtaattata 13797819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 19044442 - 19044510
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||| ||||||||||||| |||||| ||||||||||| |  | || |||||||||||||| ||||||    
T  19044442 acgacatggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattata 19044510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 2224207 - 2224270
Alignment:
Q  339 acacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||| ||||| | |||||| || ||||||||||||| |||| | |||||||||||||||||    
T  2224207 acacggatactgatatgtcgacgcagctaataatttaaaaaaatcatataattcagtgtaatta 2224270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 7086770 - 7086841
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||| ||||| ||||||||| |||  |||||||||| |  |||| |||||||| ||||||||||||    
T  7086770 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattata 7086841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 408
Target Start/End: Complemental strand, 32511718 - 32511675
Alignment:
Q  365 ctaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||  |||| |||||||||||||||||||||||||    
T  32511718 ctaataatttaagaaaatcacataattcagtgtaattataagtg 32511675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 404
Target Start/End: Complemental strand, 7265668 - 7265606
Alignment:
Q  342 cggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||| | ||||  |||||||||| |  |||| |||||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattata 7265606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 403
Target Start/End: Complemental strand, 8805656 - 8805586
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattat 403  Q
    |||||||||| ||||| ||||||||| |||  |||||||||| |  |||| |||||||| |||||||||||    
T  8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 485
Target Start/End: Original strand, 9629357 - 9629511
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaac 430  Q
    |||||||||||||| | ||||||| ||||||  | |||||||| |  |||| |||||||||| |||||||||| ||| |||| |||   | | |||| ||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtcgtgtcggac 9629456  T
Q  431 acgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    || ||| ||||||||||| |  ||||| ||||| | |||||||||  ||||||||    
T  9629457 acaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcat 9629511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 408
Target Start/End: Complemental strand, 9911587 - 9911537
Alignment:
Q  359 acacaactaataatttaaa-gaaataacataattcagtgtaattataagtg 408  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||| |||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtg 9911537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 404
Target Start/End: Original strand, 15443675 - 15443741
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||| |||||||||||||||||  | ||||||||| |  ||||||||||||||| | ||||||||    
T  15443675 gacacgaacactgacacgtcgacatcaataataatttgagaaaataacataattcaatataattata 15443741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 404
Target Start/End: Complemental strand, 24115918 - 24115860
Alignment:
Q  346 cactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||  ||||||||||||||||| || |||| |||||||||| | ||||||||    
T  24115918 cactgacacgctgacacaactaataatttcaaaaaatcacataattcaatataattata 24115860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 2153973 - 2153900
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||| ||||||||||| |||||| |||||| |  ||||||||||  |||| | |||||| ||||||||||||    
T  2153973 cggacatgacacggacaccgacacgccgacacgaacaataatttaagaaaatgatataatttagtgtaattata 2153900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 4877999 - 4878059
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| ||||||||| |||||||||||| | |||||||||| | ||||||||| |||||||||    
T  4877999 gtcggacacgacacatgtccgacacagga-cacgcctaatccgaggagtgtccgtgcttcat 4878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 546
Target Start/End: Complemental strand, 7432497 - 7432464
Alignment:
Q  513 tatatgaggatgtagctcagatggtagagcgctc 546  Q
    |||||| |||||||||||||||||||||||||||    
T  7432497 tatatggggatgtagctcagatggtagagcgctc 7432464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 9658940 - 9658997
Alignment:
Q  429 acacgacacgtgtccgacacagcaacacgcctaatt-ctaggagtgtctgtgcttcat 485  Q
    |||||||||||||| ||||| | ||||||||||||| | ||||||||| |||||||||    
T  9658940 acacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcat 9658997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 17841592 - 17841531
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| |||||||| ||||||||||| |  ||||||||||| | ||||||||| |||||||||    
T  17841592 gtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcat 17841531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 19040341 - 19040398
Alignment:
Q  347 actgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||| ||||||  |||||||||| |  |||| |||||||||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 19040398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 23771554 - 23771622
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||| ||||||||||| |||||| |||||||  |||||||||||| |||| | ||| |||||||||||||    
T  23771554 gacatgacacggacacggacacgccgacacagttaataatttaaa-aaattatatacttcagtgtaatta 23771622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 34225868 - 34225823
Alignment:
Q  358 gacacaactaataatttaaagaaataacataattcagtgtaattat 403  Q
    ||||||||||||||||| || ||||  |||||||||||||||||||    
T  34225868 gacacaactaataatttgaaaaaatcgcataattcagtgtaattat 34225823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 1700362 - 1700402
Alignment:
Q  368 ataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||| |||| ||||| |||||||||||||||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtg 1700402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 5732595 - 5732523
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||| ||||||||||||| ||||||   ||||||||| |  |||| ||||| || ||||||||||||    
T  5732595 ggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattata 5732523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 401
Target Start/End: Original strand, 7930288 - 7930348
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatt 401  Q
    ||||||||||||| | |||||||| ||||||||| || |||| |||||||| |||| ||||    
T  7930288 acggacactgacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatt 7930348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 485
Target Start/End: Complemental strand, 8776966 - 8776910
Alignment:
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||||||||| |  |||| |||||| | ||||||||| |||||||||    
T  8776966 acacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcat 8776910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 17302333 - 17302393
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||  | |||||||||||||||||||  |||| ||||||||  |||||||||||    
T  17302333 gacactgacatatggacacaactaataatttaagaaaatcacataattttgtgtaattata 17302393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 404
Target Start/End: Complemental strand, 24833306 - 24833246
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||| |||||| |||||||| ||||  ||||  ||||||| ||||||||||||    
T  24833306 gacactgacacgccgacactactaataagttaagaaaatcgcataatttagtgtaattata 24833246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 27904114 - 27904051
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaata--acataattcagtgtaatta 402  Q
    ||||||| ||||||| ||||| | ||||||||||||| ||| |  |||||||||||||||||||    
T  27904114 acggacattgacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaatta 27904051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 34073432 - 34073360
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||||||||||| | | |||   |||||||||| |  ||||  ||||||||||||||||||||    
T  34073432 ggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattata 34073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 1486795 - 1486646
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    |||| |||||||||| |||||||||  |||||| |||||||||| || |||| ||||||||||||||||||||||||| |||| ||||      |||| |    
T  1486795 cggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgt------gtcgga 1486702  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||||| |  ||||||||||| | |||||||||||||||||||    
T  1486701 cacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 485
Target Start/End: Original strand, 47989473 - 47989625
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    |||||||||| |||||||||||| |||||||| |||||||||||| |||| ||||||||||||||||||| ||||| |||| ||||||  | |||| |||    
T  47989473 gacacgacacagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 47989571  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| |||| ||||  |  ||||||||||| | ||||||||| |||||||||    
T  47989572 cgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcat 47989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 48450687 - 48450596
Alignment:
Q  317 atgaagccttgatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||| | ||||||||||||||||||||||||||||| | ||||| |||||||||| || ||||||||||||| |||||||||| |||||    
T  48450687 atgaagcatggatacggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtg 48450596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 398851 - 398778
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||||||||||||| ||||||  |||||||||| || |||| |||||||||||||||||||||    
T  398851 cggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 5376586 - 5376509
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||| ||||| ||||||  ||||||||||||  |||||||||||||||||||||||| |||||    
T  5376586 cggacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtg 5376509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 40917724 - 40917877
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt-gcggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||| || ||||  || |||| |||||||||| ||||  |||| ||||||  | || | |    
T  40917724 cggacacgacacggatactgacacgccgacacagctaataatttgaaaaaat--cacaattaagtgtaattacaagtctcggtgtcgtgtcggtgttgga 40917821  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||||| |  ||||||||||| | |||| |||| |||||||||    
T  40917822 cacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcat 40917877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 5944254 - 5944411
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt--aaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcg 427  Q
    |||||||||||| |||||||||||| || |||| ||||||||||  ||| |||| ||||||||||||||||||||||||| |||| ||||||    | ||    
T  5944254 cggacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacg 5944353  T
Q  428 aacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     |||| |||| |||||||||| |  | ||||||||| | ||||||||  |||||||||    
T  5944354 gacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcat 5944411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 19058947 - 19058865
Alignment:
Q  327 gatacggacacgacacggacact-gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||  ||||| |||||| ||||||| ||||||||||||| | |||||||||||||||||||||| |||||    
T  19058947 gatacggacacgacacacacacttgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtg 19058865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 475
Target Start/End: Complemental strand, 6612257 - 6612112
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||||||||| ||||||| ||| |||  ||||||||| || |||| ||||||||||||||||||| ||||| |||| ||||||    |||| |    
T  6612257 cggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcgga 6612158  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtc 475  Q
    ||||| | |||||||||||    ||||||||||| | |||||||||    
T  6612157 cacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 485
Target Start/End: Original strand, 9828036 - 9828172
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacac 448  Q
    |||||| |||||| ||||||||||| |  |||| |||||||||||||||||| || ||| |||| ||||||  | |||  ||||||||||||||||||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacac 9828135  T
Q  449 agcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     |  ||||| ||||| | ||||||||| |||||||||    
T  9828136 cgggacacgtctaatccgaggagtgtccgtgcttcat 9828172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 342 - 485
Target Start/End: Original strand, 37598816 - 37598948
Alignment:
Q  342 cggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaacacgacacgtgt 441  Q
    |||||||||||||| |||||||||||||||||| || |||| ||| |||||||||||||||||||||     |||     | |||| |||||||||||||    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtg-----tcg-----gtgtcggacacgacacgtgt 37598904  T
Q  442 ccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||  |  ||||||||||| | ||||||||| |||||||||    
T  37598905 ccgacaatgggacacgcctaatccgaggagtgtccgtgcttcat 37598948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 38078740 - 38078670
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| ||||||||||||||||||| |||||||||| || |||| |||||||||| |||||||| |||||    
T  38078740 gacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtg 38078670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 14359611 - 14359531
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||| ||||| |||||| ||||||| |||||||||| || |||| |||||||| |||||||||| |||||    
T  14359611 gatacggacacgacacagacacggacacgccgacacagctaataatttgaa-aaatcacataatttagtgtaattacaagtg 14359531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 403
Target Start/End: Complemental strand, 9033085 - 9033021
Alignment:
Q  340 cacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattat 403  Q
    |||||||||||||||||| |||| ||||||||||| ||| |||| ||||||||||||||||||||    
T  9033085 cacggacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaattat 9033021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 15323136 - 15323285
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||| ||||||||||| ||||| |||  ||||||||| || |||| |||||||| ||||||||| |||||| | ||||||||||      | |    
T  15323136 cggacacgacatggacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtctgtatcgtgtt------gga 15323229  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     | |||||||||||||||| | ||||| |||||| | ||||||||| ||| |||||    
T  15323230 tatgacacgtgtccgacaccgaaacacacctaatccgaggagtgtcagtgtttcat 15323285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 22881689 - 22881625
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| |||||||||||||||||| || |||| |||||||| |||||||||| |||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtg 22881625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 1815240 - 1815307
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||| |||||||| |||| |||| || |||| ||||||||||||||||||| |||||    
T  1815240 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtg 1815307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 485
Target Start/End: Original strand, 6427447 - 6427592
Alignment:
Q  344 gacactgacacgtcgacacaactaataattt---aaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgt 439  Q
    |||||||||| | ||||||||||||||||||   ||| |||| |||||||||| ||||| || ||||| | || ||||||  | |||| |||||||||||    
T  6427447 gacactgacatgccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgt 6427546  T
Q  440 gtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||| |  |||||||||||   | ||||||| |||||||||    
T  6427547 gtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcat 6427592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 31694796 - 31694641
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt--aaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcg 427  Q
    |||||||||||  |||||||| ||||||||| | ||||||||||  ||| |||| |||||||||||| |||||| ||||| |||| ||||||  | ||||    
T  31694796 cggacacgaca--gacactgatacgtcgacatagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcg 31694699  T
Q  428 aacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     |||| |||| | | |||||| | ||||||||||||   ||||||||| |||||||||    
T  31694698 gacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcat 31694641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 34298411 - 34298482
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||| ||||||||  |||||| ||||||||||| |  |||| |||||||||||||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 448
Target Start/End: Complemental strand, 9629990 - 9629868
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagt 425  Q
    ||||||| ||||||| |||||| ||||| |||||||  |||||||||| |  |||| | |||||||||||| |||||||||| |||| ||||||    ||    
T  9629990 gatacggccacgacatggacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgt 9629891  T
Q  426 cgaacacgacacgtgtccgacac 448  Q
    || ||||||||| ||||||||||    
T  9629890 cggacacgacacatgtccgacac 9629868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 404
Target Start/End: Complemental strand, 16927268 - 16927198
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||| ||||||||||||||| || | |||||||||| || |||| | |||||||||||||||||||    
T  16927268 acacgacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattata 16927198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 42359532 - 42359458
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||| |||||||||||||||||  |||||| |||||||||| || |||| ||| ||||||||||||||| |||||    
T  42359532 acacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtg 42359458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 46348462 - 46348392
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||||| |||||||||| || |||| | |||||| |||||||||| |||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtg 46348392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 404
Target Start/End: Complemental strand, 5898356 - 5898279
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||| ||||| |||||||| ||| ||||||  |||||||| | || |||| |||||||||||||||||||||    
T  5898356 gatacggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattata 5898279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 21378547 - 21378628
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||| ||||||||||||||||  |||||  ||||||| ||||||| || || |||| ||||||||||||||||||| |||||    
T  21378547 gatatggacacgacacggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtg 21378628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 28273178 - 28273097
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||| |||| ||||||||||| |  |||||||||||| |||| || |||| | ||||||||||||||||| |||||    
T  28273178 gatacggacatgacaaggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtg 28273097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 113289 - 113349
Alignment:
Q  348 ctgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtg 113349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 2896208 - 2896140
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgta 398  Q
    |||||||| ||||||||||||||||| ||||||  |||||||||| |  |||| |||||||||||||||    
T  2896208 acggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 18471271 - 18471350
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt--aaagaaataacataattcagtgtaattataagtg 408  Q
    |||| |||||||||||| |||| |||||||||| ||||||||||  ||| |||| |||||||||||| |||||| |||||    
T  18471271 cggatacgacacggacaatgacccgtcgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtg 18471350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 21366103 - 21366039
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgta 398  Q
    |||||||||| |||| |||||| || |||| |||||||||| || ||||||||||||||||||||    
T  21366103 acacgacacgaacaccgacacgccggcacagctaataattttaaaaaataacataattcagtgta 21366039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 24577259 - 24577195
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| ||||||  ||||||||||||||||| || |||| ||||||||||||||||||| |||||    
T  24577259 gacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 24577195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 402
Target Start/End: Complemental strand, 10572675 - 10572604
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||||||| | ||||||||||| |||||| ||||||||||| |  |||| ||||||||| |||||||||    
T  10572675 cggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaatta 10572604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 402
Target Start/End: Complemental strand, 16297369 - 16297298
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| | || |||| ||| |||||||||||||||    
T  16297369 cggacacgatacggatactgacacgtcgacacagcaaataatatgaaaaaatcacaaaattcagtgtaatta 16297298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 6427322 - 6427396
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||| |||||||||||||||| | ||||  |||||||||| |  |||| |||||||||| ||||||||||    
T  6427322 acggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattata 6427396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 485
Target Start/End: Complemental strand, 32461536 - 32461395
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtc 442  Q
    |||| ||||||| || ||||||||||||||| || |||| |||||||| | |||||||| |||||  ||| | ||||  | |||| ||||||||||||||    
T  32461536 gacagtgacacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtc 32461438  T
Q  443 cgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     ||||| |  ||||||||||| | || |||||| |||||||||    
T  32461437 tgacactgggacacgcctaatccaagaagtgtccgtgcttcat 32461395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 404
Target Start/End: Original strand, 36878429 - 36878507
Alignment:
Q  327 gatacggacacg-acacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||| |||  |||||||||||| ||||||  |||||||||| |  |||| |||||||||||||||||||||    
T  36878429 gatacggacacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 7918297 - 7918224
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||| |||| |||||||  ||||  ||||||||||| |  |||| |||||||||||||||||||||    
T  7918297 cggacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattata 7918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 404
Target Start/End: Original strand, 13436451 - 13436504
Alignment:
Q  351 acacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||| ||||||  |||||||||||| ||||| |||||||||||||||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaattata 13436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 15641116 - 15641043
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||| |||||||||||||||| | ||||||  ||||||||||||  |||| |||| ||||||||||| ||||    
T  15641116 cggacatgacacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaactata 15641043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 18556535 - 18556466
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    |||||||||||||||||| ||||||| |||||||||| || | || |||||||| | |||||||| ||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 400
Target Start/End: Complemental strand, 20157436 - 20157367
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaat 400  Q
    |||||||||||||| ||||||||| |||||||  |||||||| | |  |||| |||||||||||||||||    
T  20157436 cggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaat 20157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 31015020 - 31015093
Alignment:
Q  335 cacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||| ||||||| || | ||||| |||||||||| |  |||| ||||||||||||||||||| |||||    
T  31015020 cacgacacgggcactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagtg 31015093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 13997869 - 13997929
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||| ||||||   |||| ||||||| |||| |||||||||||||||||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattata 13997929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 18471356 - 18471412
Alignment:
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||||||||| | ||||| |||||||| ||||||||| || ||||||    
T  18471356 acacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcat 18471412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 31672969 - 31672905
Alignment:
Q  343 ggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    ||||||||||||  ||||||| |||||||||| || |||| || |||||||||||||||| ||||    
T  31672969 ggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagt 31672905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 442
Target Start/End: Original strand, 34315681 - 34315797
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagt 425  Q
    |||| |||||||||||||| ||||||| | ||||||| ||||   ||| || |||  ||||||||| ||||||||||| ||| ||||||||| |  | ||    
T  34315681 gatatggacacgacacggatactgacatgccgacacagctaaattttttaaaaaactacataattcggtgtaattatatgtgtcggtatcgtatcggtgt 34315780  T
Q  426 cgaacacgacacgtgtc 442  Q
    |||||||||||| ||||    
T  34315781 cgaacacgacacatgtc 34315797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 402
Target Start/End: Original strand, 1262857 - 1262928
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||||||||| |||| |||||| ||||||| |||||||||| |  |||| |||||||||| | ||||||    
T  1262857 cggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 408
Target Start/End: Complemental strand, 1705068 - 1705001
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||| |||||  ||||||| |||||||||| || |||| ||||||||||| ||||||| |||||    
T  1705068 acggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtg 1705001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 485
Target Start/End: Original strand, 21032176 - 21032334
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagt 425  Q
    ||||||||| ||| ||||||||||||||   ||||||  |||||||| ||| |||| || ||||| | | |||||| || || |||| ||||||  | ||    
T  21032176 gatacggacgcgatacggacactgacacactgacacagttaataattaaaa-aaattacttaattaaatataattacaaatgtcggtgtcgtgtgggtgt 21032274  T
Q  426 cgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    || |||||||| ||||||||||  |  | ||||||||| | |||||||||||||||||||    
T  21032275 cggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcat 21032334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 485
Target Start/End: Original strand, 25934637 - 25934744
Alignment:
Q  379 aaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctg 477  Q
    |||| ||| ||| ||||||||||||| ||| |||||||||||  | |||| |||||||||||||| ||||| |  | |||||| || | ||||||||| |    
T  25934637 aaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccg 25934736  T
Q  478 tgcttcat 485  Q
    ||||||||    
T  25934737 tgcttcat 25934744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 408
Target Start/End: Complemental strand, 40258993 - 40258942
Alignment:
Q  357 cgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||| ||||||||| || |||| ||||||||||||||||||| |||||    
T  40258993 cgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtg 40258942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 48040548 - 48040505
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt 374  Q
    ||||||||||||||||||||||||| |||||||  |||||||||    
T  48040548 cggacacgacacggacactgacacgccgacacagataataattt 48040505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 18190167 - 18190117
Alignment:
Q  358 gacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtg 18190117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 19324550 - 19324616
Alignment:
Q  346 cactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggt 412  Q
    |||||| ||||||||||  || ||||||| |  |||| ||||||||||||||||||||| |||||||    
T  19324550 cactgatacgtcgacactgctgataatttgagaaaatcacataattcagtgtaattatatgtgcggt 19324616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 23622304 - 23622362
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||| ||||| |||||| ||||||| |||||| |||| |||||| ||||||||||||    
T  23622304 gacactaacacgccgacaccactaatagtttaaaaaaatcacataactcagtgtaatta 23622362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 5927426 - 5927349
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||||||||||   ||||  |||||||||| || |||| | |||||| | |||||||| |||||    
T  5927426 cggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtg 5927349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 6332671 - 6332719
Alignment:
Q  358 gacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    ||||||||||||||||| || |||| ||||||||||||||||||| ||||    
T  6332671 gacacaactaataatttgaa-aaatcacataattcagtgtaattacaagt 6332719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 10577821 - 10577748
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||||||| |||||| ||||||| |||||  ||| |  |||| ||| ||| |||||||||||||    
T  10577821 cggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattata 10577748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 401
Target Start/End: Complemental strand, 12443537 - 12443476
Alignment:
Q  340 cacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatt 401  Q
    |||||| || |||||| ||||||| |||||||||| |  |||| ||||||||||||||||||    
T  12443537 cacggatacggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 475
Target Start/End: Complemental strand, 17831604 - 17831474
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaaca-cgacacgtgtc 442  Q
    |||||||||||| ||||||  |||||||||| |  |||| |||| |||||||||||| ||| |||  |  |||||| || |||| ||| ||||| |||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg--tcgtgtcagtgtcggacaccgacatgtgtc 17831507  T
Q  443 cgacacagcaacacgcctaattctaggagtgtc 475  Q
    |||||| |  |||||||||||  ||||||||||    
T  17831506 cgacaccgggacacgcctaatcttaggagtgtc 17831474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 22794164 - 22794091
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||| ||||||  |||||||||||||| ||||   ||||||||| || |||| ||||||| |||||||||||||    
T  22794164 cggatacgacatagacactgacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaattata 22794091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 485
Target Start/End: Original strand, 28663681 - 28663714
Alignment:
Q  452 aacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||| |||||||||||||||||||    
T  28663681 aacacgcctaattcgaggagtgtctgtgcttcat 28663714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 34257996 - 34257923
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||| || ||||| | ||||||||||||||   |||||||||||  |||| |||||||| ||||||||||||    
T  34257996 cggacatgatacggatattgacacgtcgacaccgttaataatttaataaaatcacataatttagtgtaattata 34257923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 443
Target Start/End: Original strand, 34371734 - 34371799
Alignment:
Q  379 aaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtcc 443  Q
    |||| ||||||||||||||||||||| ||| |||| ||||||| | |||| | |||||||||||||    
T  34371734 aaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtcc 34371799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 17754289 - 17754357
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||| ||| |||||||  ||||||  |||||||||| || |||| |||||||||||||||| ||||    
T  17754289 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactata 17754357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 399
Target Start/End: Original strand, 30359357 - 30359429
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaa 399  Q
    ||||||||||||  || |||||||||||  || ||||||| ||||||| || |||| |||||||| |||||||    
T  30359357 gatacggacacgggacagacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaa 30359429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 51410023 - 51410075
Alignment:
Q  357 cgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||| |||||||||| ||| |||| ||||||||||||||||||| |||||    
T  51410023 cgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtg 51410075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 24339615 - 24339770
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    ||||||||||| ||||| ||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| ||||| |||| ||||||  | |||| |    
T  24339615 cggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcgga 24339714  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||| |||||||| |  ||||||||||| | ||||||| | |||||||||    
T  24339715 cacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcat 24339770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 482
Target Start/End: Original strand, 13770664 - 13770810
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaac 430  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||| |||| ||||||||||||||||||| |||||     ||||  | | |||| ||    
T  13770664 cggacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtg-----tcgttgtcgtgtcggac 13770758  T
Q  431 acgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgctt 482  Q
    || ||||||||||||||| | |||||||||||| | | ||||||| ||||||    
T  13770759 acaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 485
Target Start/End: Complemental strand, 43027554 - 43027406
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaac 430  Q
    |||||||||||||||||||||||| |||| || |||||||||| || |||| ||||||| |||||||| || ||||| |||| |||||| ||      ||    
T  43027554 ggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcag------ac 43027461  T
Q  431 acgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||||||| |  ||||||||||| | | ||||||| |||||||||    
T  43027460 acgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcat 43027406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 485
Target Start/End: Complemental strand, 11665508 - 11665371
Alignment:
Q  349 tgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgaca 447  Q
    |||||||  ||||||||||||||||| || |||| |||||||||||| |||||||||||| || | || |||  | ||||||||||||||||||||||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgaca 11665409  T
Q  448 cagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    | | |||||  ||||| | |||| |||| |||||||||    
T  11665408 ccgaaacacatctaatacgaggaatgtccgtgcttcat 11665371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 24105647 - 24105728
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| || ||||  ||| |||||||||||||| |||||    
T  24105647 gatacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtg 24105728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 27945014 - 27945091
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| |  |||| ||||||||||||||||||| |||||    
T  27945014 cggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtg 27945091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 5409922 - 5409773
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    |||| |||||| |||||||||||||  || ||| |||||||||| || |||| ||||||||||||| ||||| ||||| |||| ||||||      || |    
T  5409922 cggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgt------cgga 5409829  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||||| |  ||||||||||| | ||||||||| |||||||||    
T  5409828 cacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 5409773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 338 - 485
Target Start/End: Original strand, 15680789 - 15680926
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaacacgacac 437  Q
    |||| ||||||||||||| ||||| | ||||||||| ||| |||| |||||||| ||||||||||||||||     |||     | |||| |||||||||    
T  15680789 gacatggacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtg-----tcg-----gtgtcggacacgacac 15680878  T
Q  438 gtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||| |  ||||| ||||||| ||||||||| |||||||||    
T  15680879 gtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcat 15680926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 41020483 - 41020542
Alignment:
Q  345 acactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||||||||||||||||||| | |||| |||||||| ||||||||||||    
T  41020483 acactgacacgtcgacacaactaataatttacaaaaatcacataatttagtgtaattata 41020542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 485
Target Start/End: Original strand, 7438693 - 7438834
Alignment:
Q  345 acactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtcc 443  Q
    ||||||||| | |||||||  ||||||||| || |||| |||||||||| |||||||| ||||| |||| || |||  | ||| |||||||||| ||| |    
T  7438693 acactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgc 7438792  T
Q  444 gacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||    ||||||||||||| ||||||||| |||||||||    
T  7438793 gacactaggacacgcctaattcaaggagtgtccgtgcttcat 7438834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 25481875 - 25481952
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||| ||| ||||| ||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  25481875 cggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtg 25481952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 26733279 - 26733348
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||||||||||||||||||||||||||  |||||||||| |  |||| |||||||||||| ||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaatta 26733348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 5235960 - 5236032
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||  |||| | |||||| ||||||||||||    
T  5235960 ggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattata 5236032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 18013155 - 18013087
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||||||    ||||| |||||||||||||| |||| |||||||||||||||||||||    
T  18013155 acgacacggacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattata 18013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 331 - 482
Target Start/End: Original strand, 43249966 - 43250118
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaac 430  Q
    |||||| |||||||||||||||||| ||||||   ||||||||| |  |||| ||||||| |||||||||||||||||  || |||   | | |||| ||    
T  43249966 cggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtcgcgtcggac 43250065  T
Q  431 ac-gacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgctt 482  Q
    || ||| ||||||||||||    ||||||||||||| ||||||||| ||||||    
T  43250066 actgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 13557830 - 13557749
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt---aaagaaataacataattcagtgtaattataagtgc 409  Q
    |||||| ||||| |||||||||||| ||||| ||||||||||||   ||| |||| ||||||||||||||||||| ||||||    
T  13557830 cggacatgacacagacactgacacgccgacaaaactaataatttaaaaaaaaaatcacataattcagtgtaattacaagtgc 13557749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 404
Target Start/End: Complemental strand, 21141065 - 21140995
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||| | ||||||||||||| |||||||||||||  |||| | |||||||||||| ||||||    
T  21141065 acacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattata 21140995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 22868014 - 22868088
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||| |||| |||||||||||| |||||| ||||||||| | |  |||| |||||||||||||||||||||    
T  22868014 acggacacaacaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattata 22868088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 365 - 486
Target Start/End: Complemental strand, 26033513 - 26033391
Alignment:
Q  365 ctaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaat 463  Q
    |||||||||| || |||| ||||||||||||||||||| ||||| |||| ||||||  | |||  ||| ||||||||||||| || || |||| ||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaat 26033414  T
Q  464 tctaggagtgtctgtgcttcatt 486  Q
     | ||||||||| ||| ||||||    
T  26033413 ccgaggagtgtccgtgtttcatt 26033391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 8234132 - 8234197
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgc 409  Q
    ||||| |||||  |||||||||||||||||| || |||||||||||||||||||| ||| ||||||    
T  8234132 gacacagacacaccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtgc 8234197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 11061162 - 11061085
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||| |||||||||||||||||||  ||||||| |||||||||| || |||| |||||||| ||| |||||| |||||    
T  11061162 cggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtg 11061085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 21864864 - 21864925
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| |||||||||||||||||||| |  ||||| ||||||| |||||||||||||||||||    
T  21864864 gtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcat 21864925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 15902792 - 15902868
Alignment:
Q  328 atacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||| |||||||||| | |||||| | ||||||||| |  |||| |||||||| ||||||||||||    
T  15902792 atacggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattata 15902868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 463
Target Start/End: Original strand, 6028600 - 6028731
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    |||||||||| ||||||||||| |||| |    ||||||||| || | ||||||||||| | |||||||| || || |||| |||||| || ||||||||    
T  6028600 gacacgacacagacactgacacatcgatatggttaataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaaca 6028699  T
Q  432 cgacacgtgtccgacacagcaacacgcctaat 463  Q
    ||||||| || |||||| |  |||||||||||    
T  6028700 cgacacgagttcgacactgagacacgcctaat 6028731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 35861951 - 35862014
Alignment:
Q  345 acactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| ||||| |||||||||||||||||| || |||| |||||||||| ||||||| ||||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtg 35862014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 4794915 - 4795017
Alignment:
Q  384 acataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgctt 482  Q
    ||||||||||||||||||||||||| ||||| ||| |  | |||| ||||||||||| || |||||   |||||| ||||| | || |||||||||||||    
T  4794915 acataattcagtgtaattataagtgtcggtaccgtatcggtgtcggacacgacacgtatctgacacctaaacacgtctaatccaagaagtgtctgtgctt 4795014  T
Q  483 cat 485  Q
    |||    
T  4795015 cat 4795017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 482
Target Start/End: Original strand, 8160423 - 8160541
Alignment:
Q  365 ctaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaat 463  Q
    ||||||||||||  |||| |||||||| |||||||||||| |||  ||||||||||  | ||||||||||   |||||||||||| |  | || ||||||    
T  8160423 ctaataatttaagaaaattacataatttagtgtaattatatgtgttggtatcgtgtcggtgtcgaacacgtatcgtgtccgacaccgagatacacctaat 8160522  T
Q  464 tctaggagtgtctgtgctt 482  Q
    |||||||| ||| ||||||    
T  8160523 tctaggagcgtccgtgctt 8160541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 14077517 - 14077443
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||| ||||||||| ||  ||||| |||| || ||||||||||||| | | ||||||||||||    
T  14077517 acacgacacggacacttacacgtcgatacccctaattatttgaaaaaataacataatttaatataattataagtg 14077443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 14387545 - 14387471
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||| ||||||||| ||  ||||| |||| || ||||||||||||| | | ||||||||||||    
T  14387545 acacgacacggacacttacacgtcgatacccctaattatttgaaaaaataacataatttaatataattataagtg 14387471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 6630985 - 6630880
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtc 442  Q
    |||||||||||| |||||| ||||||||||| |  || | || |||||||||||||||||| ||| || | ||||||| | |||| |||| ||||||| |    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcc 6630886  T
Q  443 cgacac 448  Q
    ||||||    
T  6630885 cgacac 6630880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 485
Target Start/End: Original strand, 9778500 - 9778622
Alignment:
Q  358 gacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacac 456  Q
    |||||| || ||||||| || |||| |||||||||||| |||||| ||||| |||| ||||||      || |||| ||||||||||||||| |  ||||    
T  9778500 gacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgt------cggacacaacacgtgtccgacaccgggacac 9778593  T
Q  457 gcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||| | ||||||||| |||||||||    
T  9778594 gcctaatccaaggagtgtccgtgcttcat 9778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 10042906 - 10042987
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| || |||||||||||||| ||||| |||||| ||||||||||| |  || | |||||||| || |||||||||||||    
T  10042906 gataccgatacgacacggacacttacacgccgacaccactaataatttgataaattcacataatttagcgtaattataagtg 10042987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 5835233 - 5835293
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||| ||| |||||| ||||||| ||| |  ||||||||||||||||||||||||||    
T  5835233 gacactgatacgccgacaccactaatagtttgagaaaataacataattcagtgtaattata 5835293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 9408407 - 9408343
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||  |||||||| ||||||||| || |||| |||||||| |||||||||| |||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtg 9408343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 404
Target Start/End: Complemental strand, 18213118 - 18213046
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaag-aaataacataattcagtgtaattata 404  Q
    ||||||||||||||||||| ||| |||||||||||||  |||  || |||| |||||||| ||||||||||||    
T  18213118 gacacgacacggacactgatacgccgacacaactaattttttttagaaaatcacataatttagtgtaattata 18213046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 510 - 546
Target Start/End: Original strand, 30034295 - 30034331
Alignment:
Q  510 aaatatatgaggatgtagctcagatggtagagcgctc 546  Q
    ||||||||| |||||||||||||||||||||||||||    
T  30034295 aaatatatggggatgtagctcagatggtagagcgctc 30034331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 32094105 - 32093956
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaac 430  Q
    ||||||||||  ||||| ||| | | |||||||||||||||| ||| |||| ||||||||||||||||||| || || |||| ||||      |||| ||    
T  32094105 gacacgacacaaacactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgt------gtcggac 32094012  T
Q  431 acgacacgtgtccgaca-cagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||| | |  ||||||||||| | ||||||||  |||||||||    
T  32094011 acgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcat 32093956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 408
Target Start/End: Original strand, 598183 - 598258
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||| ||||||||||||||||| |||||||  ||||||||||||  |||| || ||||| | ||||||| ||||||    
T  598183 gacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtg 598258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 2034410 - 2034457
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataattt 374  Q
    ||||| ||||||||||||| ||| |||||||||||| |||||||||||    
T  2034410 gatactgacacgacacggatacttacacgtcgacaccactaataattt 2034457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 3991323 - 3991374
Alignment:
Q  357 cgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| || |||| |||||||||||| |||||| |||||    
T  3991323 cgacacaactaataatttgaaaaaatcacataattcagtataattacaagtg 3991374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 394
Target Start/End: Complemental strand, 11722184 - 11722121
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcag 394  Q
    ||||||||||||||||||||||||| ||||||  |||| ||||| |  |||| |||||||||||    
T  11722184 cggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 400
Target Start/End: Original strand, 21826248 - 21826315
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaat 400  Q
    |||||||||  |||||| ||||| |||||| |||||||||||||| |||| |||||| ||||| ||||    
T  21826248 gacacgacatagacactaacacgccgacacgactaataatttaaaaaaatcacataactcagtctaat 21826315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 28401112 - 28401159
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataattt 374  Q
    |||||||||||||||||| |||  |||||||||||| |||||||||||    
T  28401112 gatacggacacgacacgggcaccaacacgtcgacactactaataattt 28401159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 408
Target Start/End: Original strand, 33994187 - 33994262
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| ||||||||||| |||| |||||| |||||| || |  | ||||||||||||| ||||| |||||    
T  33994187 gacacgacacgaacactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtg 33994262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 3801265 - 3801203
Alignment:
Q  357 cgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgt 419  Q
    |||||||| |||||||||||  |||||||||||||||  ||||| ||||||| ||| ||||||    
T  3801265 cgacacaaataataatttaagaaaataacataattcaaggtaatcataagtgtggtgtcgtgt 3801203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 407
Target Start/End: Original strand, 4024026 - 4024076
Alignment:
Q  357 cgacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    ||||||||||||||||||||| |||| |||||||| | | |||||||||||    
T  4024026 cgacacaactaataatttaaaaaaatgacataatttaatataattataagt 4024076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 404
Target Start/End: Complemental strand, 7328774 - 7328704
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||| |||| | ||||||||| ||  |||||||||| |  ||||||||||||| ||||||||||||    
T  7328774 acacgacacagacattaacacgtcgatactgctaataatttgagaaaataacataatttagtgtaattata 7328704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 18215265 - 18215195
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| ||||| |||| || |||||||||| || |||| ||||||| ||||||| ||| |||||    
T  18215265 gacacggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtg 18215195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 25822647 - 25822705
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| |||||||||||||||||| || ||| | || ||||||||||||||| |||||    
T  25822647 gacacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtg 25822705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 401
Target Start/End: Original strand, 32308105 - 32308163
Alignment:
Q  343 ggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatt 401  Q
    ||||||||||||| ||||||  |||||||||| |  |||| ||||||||||||||||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 393
Target Start/End: Complemental strand, 36297430 - 36297369
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattca 393  Q
    ||||||||||||||||| |||||| |||||||  ||||||||||||  |||| ||||||||||    
T  36297430 cggacacgacacggacattgacac-tcgacacggctaataatttaagaaaatcacataattca 36297369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 408
Target Start/End: Complemental strand, 7197375 - 7197306
Alignment:
Q  339 acacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||| |||| ||||||| ||||||| ||||||||||||| |||| |  ||||||| |||||||| |||||    
T  7197375 acacagacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtg 7197306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 407
Target Start/End: Original strand, 11831424 - 11831481
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    ||||| ||||||||||||||||||| || |||| | |||||| |||||||||| ||||    
T  11831424 gacacatcgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 17851404 - 17851477
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||| ||| || ||||| |||| ||  |||||||||| |  |||| |||||||||||||||||||||    
T  17851404 cggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaattata 17851477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Original strand, 17852056 - 17852117
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| ||| |||||||||||||||| |  |||| |||||||| ||||||||| |||||||||    
T  17852056 gtcggacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcat 17852117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 20545247 - 20545186
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| ||||||||| |||||||||| |  |||||  |||||| |||||||||||||||||||    
T  20545247 gtcgtacacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcat 20545186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 29787456 - 29787383
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattat 403  Q
    ||||| || ||||||||| | ||||| ||||||  |||||||||| |  |||| ||||||||||||||||||||    
T  29787456 acggatacaacacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 598269 - 598325
Alignment:
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||||||||| |  ||||||||||| | || |||||| |||||||||    
T  598269 acacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 598325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 3938131 - 3938191
Alignment:
Q  346 cactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataag 406  Q
    ||||||||| |||| || |  ||||||||||| |||| |||||||||| ||||||||||||    
T  3938131 cactgacacatcgatactataaataatttaaaaaaatcacataattcaatgtaattataag 3938191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 371
Target Start/End: Original strand, 4793836 - 4793876
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataa 371  Q
    |||||||||||| |||||||||||||||| ||| |||||||    
T  4793836 cggacacgacacagacactgacacgtcgatacagctaataa 4793876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 4909851 - 4909899
Alignment:
Q  339 acacggacactgacacgtcgacacaactaataatttaaagaaataacat 387  Q
    |||||||||||||||||| ||||| | |||||||||||  |||||||||    
T  4909851 acacggacactgacacgttgacaccaataataatttaatcaaataacat 4909899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 8056995 - 8056956
Alignment:
Q  366 taataatttaaagaaataacataattcagtgtaattataag 406  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  8056995 taataatttaaa-aaattacataattcagtgtaattataag 8056956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 21864779 - 21864858
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt--aaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| |||||   |||||| ||||||||||  ||| |||| | |||||| |||||||||| |||||    
T  21864779 cggacacgacacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtg 21864858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 485
Target Start/End: Complemental strand, 40131989 - 40131941
Alignment:
Q  437 cgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||  ||||| ||||| | |||||||||||||||||||    
T  40131989 cgtgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcat 40131941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 404
Target Start/End: Complemental strand, 42720963 - 42720903
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||| |||||  |||||||||| || |||| |||||||| | ||||||||||    
T  42720963 gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattata 42720903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 463
Target Start/End: Complemental strand, 27706261 - 27706130
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcg-gtatcgtgttagagtcgaaca 431  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||||| |||||||||| ||||| | || ||||||||  |||| |||    
T  27706261 gacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggaca 27706162  T
Q  432 cgacacgtgtccgacacagcaacacgcctaat 463  Q
    |||||||| ||||| || |  |||||||||||    
T  27706161 cgacacgtatccgataccgggacacgcctaat 27706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 23293072 - 23292928
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaac 430  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||| || |||| |||||||||||| |||||| |||||     |||     | |||| ||    
T  23293072 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtg-----tcg-----gtgtcggac 23292983  T
Q  431 acgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||||||| |  ||||||||||| | ||||||||| |||||||||    
T  23292982 acgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 23292928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 485
Target Start/End: Original strand, 19482643 - 19482796
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    |||||||||| |||||||||||| |||||||||||||||||| || | || ||||||||| ||||||||| |||||  ||| ||||||  |  | | |||    
T  19482643 gacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggaca 19482742  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||| |  |||| |||||| | ||||||||  |||||||||    
T  19482743 cgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcat 19482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 331 - 485
Target Start/End: Complemental strand, 5414258 - 5414103
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt-gcggtatcgtgttagagtcgaa 429  Q
    |||||||||||||||||| |||||| ||||||| |||||  ||| |  |||| ||| ||| ||||||||||||| ||  |||| |||||| || |||| |    
T  5414258 cggacacgacacggacacggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcgga 5414159  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||| |||||||  |||| ||| || | ||||||||| |||||||||    
T  5414158 cacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcat 5414103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 11651218 - 11651155
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtg 396  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  11651218 gacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 40481609 - 40481686
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||||| |||||    
T  40481609 acggacacgacactgacactgacacgccgatacaactaataatttgaa-aaatcacataattcagtgtaattacaagtg 40481686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 12797427 - 12797347
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||| |||||||||||||||||||| || || |||||||||||| || |||| ||||||||||||||||||| |||||    
T  12797427 gatacggatacgacacggacactgacacgccggcaaaactaataatttgaa-aaatcacataattcagtgtaattacaagtg 12797347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 35158071 - 35157994
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||  | |||| |||||||| ||||||||||||||||    
T  35158071 cggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtg 35157994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 36635297 - 36635447
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaac 430  Q
    |||||||||| |||||||||||||| | |||| ||||||||||| |  |||| ||||||||||||||||||||| |||     |||||| || |||  ||    
T  36635297 cggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtg----ttcgtgtgagtgtcagac 36635392  T
Q  431 acgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||| ||| ||||| |  ||||||||||| | | ||||||| |||||||||    
T  36635393 acgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcat 36635447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 483
Target Start/End: Original strand, 21945476 - 21945618
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtgcggtatcgtgttagagtcgaac 430  Q
    |||||| ||||| |||||||||| | ||||||| |||||||||| || |||| ||||||||||||||||||| |||||     |||     | |||| ||    
T  21945476 cggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtg-----tcg-----gtgtcggac 21945565  T
Q  431 acgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttc 483  Q
    | ||||| |||||||||| |||||||||||||| | |||||||||| ||||||    
T  21945566 atgacacatgtccgacaccgcaacacgcctaatccgaggagtgtctatgcttc 21945618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 30298926 - 30298997
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||||| |||||||||| ||| |||| ||||||||||||||||||| |||||    
T  30298926 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtg 30298997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 30327794 - 30327865
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||||| |||||||||| ||| |||| ||||||||||||||||||| |||||    
T  30327794 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtg 30327865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 49430997 - 49431076
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| |||||| ||||||| ||||||| |||||||||| ||| |||| ||||||||||||||||||| |||||    
T  49430997 acggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtg 49431076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 482
Target Start/End: Original strand, 30838185 - 30838335
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt-gcggtatcgtgttagagtcgaaca 431  Q
    |||||| |||||||||||| ||||||| ||  |||||||||| |  |||| | |||||| |||||||||||||||  |||| |||||| || |||| ||     
T  30838185 gacacggcacggacactgatacgtcgatactgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacg 30838284  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgctt 482  Q
    |||||||||||||||||    ||||||||||  | ||||||||| ||||||    
T  30838285 cgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 402
Target Start/End: Original strand, 4383351 - 4383411
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||||||||||||||| |||||||||||||| || |||| |||||||||||||||||||    
T  4383351 acggacactgacacgtcgatacaactaataatttgaa-aaatcacataattcagtgtaatta 4383411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 485
Target Start/End: Complemental strand, 24613768 - 24613632
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacac 448  Q
    ||||||||||||||||||||||||| |  |||| |||||||||| ||||| || ||||| |||| || |||  | |||  |||||||||||||| |||||    
T  24613768 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacac 24613669  T
Q  449 agcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
        ||||| ||||| ||||||||||| |||||||||    
T  24613668 caggacacgtctaatcctaggagtgtccgtgcttcat 24613632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 30982916 - 30982809
Alignment:
Q  379 aaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctg 477  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||  | |||  |||||||||||||||||||| |  ||||||||||| | | ||||||| |    
T  30982916 aaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccg 30982817  T
Q  478 tgcttcat 485  Q
    ||||||||    
T  30982816 tgcttcat 30982809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 404
Target Start/End: Complemental strand, 40179715 - 40179649
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||||||||| ||||| | ||||| ||| || |||| |||||||||||||||||||||    
T  40179715 gacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattata 40179649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 54580082 - 54580032
Alignment:
Q  358 gacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtg 54580032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 485
Target Start/End: Complemental strand, 3947853 - 3947703
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcga 428  Q
    |||||||| |||| ||||| |||| | ||||||| |||||||||| || ||||  |||||||||||||||||| ||||| | || ||||      ||||     
T  3947853 acggacaccacacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgt------gtcgg 3947760  T
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||||||||||||||    |||| |||||| | ||||||||| |||||||||    
T  3947759 acacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcat 3947703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 12895360 - 12895283
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||| |||||||| ||| ||||||| |||||||| ||||||||| || |||| ||||||||  |||||||||||||||    
T  12895360 cggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtg 12895283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 408
Target Start/End: Original strand, 20633460 - 20633532
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||| ||||||||||||||||||||||  ||||||||||   |||| ||||||||||| |||||||| |||||    
T  20633460 gacacgatacggacactgacacgtcgacaccgctaataattt---gaaaaaacataattcaatgtaattacaagtg 20633532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 28084494 - 28084572
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||| ||| |||||||| ||||||| |||| ||||| ||| |||| |||||||||| |||||||| |||||    
T  28084494 cggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtg 28084572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 32273594 - 32273536
Alignment:
Q  349 tgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagt 407  Q
    ||||||| | |||||||||||||||| || ||||||||||||||||  |||||||||||    
T  32273594 tgacacgccaacacaactaataatttgaaaaaataacataattcagaataattataagt 32273536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 485
Target Start/End: Complemental strand, 753021 - 752873
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaa-taacataattcagtgtaattataagtgc-ggtatcgtgttagagtcg 427  Q
    |||||||||||||  || || ||||  ||||||| ||||||||||||| ||| | ||||||||||||||||||| |||||  ||| || |||            
T  753021 acggacacgacacatactctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgt-------- 752930  T
Q  428 aacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     ||||||||| ||||||||||||  ||||||||||| | ||||||||| |||||||||    
T  752929 -acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 752873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 22234967 - 22234858
Alignment:
Q  341 acggacactgacacgtcgacacaactaataattt-aaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacg 438  Q
    |||||||| |||||| ||||||  |||| ||||| ||| |||| |||||||||||||||||| || ||| |||| ||||||  | |||  ||||||||||    
T  22234967 acggacacggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacg 22234868  T
Q  439 tgtccgacac 448  Q
    ||||||||||    
T  22234867 tgtccgacac 22234858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 404
Target Start/End: Complemental strand, 22440690 - 22440613
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||| ||||||||| ||||||||| || |||||||   ||||||||| |  |||| |||||||||||||||||||||    
T  22440690 gatacagacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattata 22440613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 24343480 - 24343553
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||||| | |||||| ||||||   ||||||||| |  |||| |||||||||||||||||||||    
T  24343480 cggacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 24543967 - 24544032
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaata-acataattcagtgtaattataagtg 408  Q
    |||||||||||| ||||||||||||||||||||| ||||| || |||| || |||||||| |||||    
T  24543967 gacactgacacgccgacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtg 24544032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 485
Target Start/End: Complemental strand, 715603 - 715547
Alignment:
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||||| ||||||||||||  ||||||||||| | ||||||||| |||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 715547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 408
Target Start/End: Original strand, 12708121 - 12708197
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataa-tttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||| | ||||||||||||  |||||||||||||| ||| || |||| | ||||||||||||||||| |||||    
T  12708121 gacacgacgcagacactgacacgcagacacaactaataatttttaaaaaatgaaataattcagtgtaattacaagtg 12708197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 14126196 - 14126120
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| |||||| ||||| ||||||   ||||||||| |  || | |||||||||||||||||||||||||    
T  14126196 ggacacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtg 14126120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 847924 - 848079
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaa 429  Q
    |||||||||||| |||||||||||| |||  |  |||||||||| |  |||| |||||||||| | |||||| ||||| |||| || |||| | |||| |    
T  847924 cggacacgacacagacactgacacgccgatgccgctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcgga 848023  T
Q  430 cacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||| |||||||  |||| |  |||| |||||| | ||||||||| ||| |||||    
T  848024 cacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttcat 848079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 486
Target Start/End: Original strand, 4157205 - 4157267
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcatt 486  Q
    |||| ||||||||| |||||||||| |  | || |||||||| ||||||||||||||||||||    
T  4157205 gtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcatt 4157267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 486
Target Start/End: Original strand, 4157492 - 4157554
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcatt 486  Q
    |||| ||||||||| |||||||||| |  | ||||||||||| |||||||||| |||||||||    
T  4157492 gtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcatt 4157554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 404
Target Start/End: Complemental strand, 26504378 - 26504312
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    |||||||||||||| || |||||||  ||||||||||||  |||| | ||| |||||||||||||||    
T  26504378 gacacggacactgaaacatcgacactgctaataatttaagaaaatcaaatagttcagtgtaattata 26504312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 399
Target Start/End: Complemental strand, 34515958 - 34515892
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaa 399  Q
    ||||| ||||| ||||||||||||||||||   |||||||| ||  |||| ||||||||||||||||    
T  34515958 gacacaacacgaacactgacacgtcgacacggataataattcaagaaaatgacataattcagtgtaa 34515892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 404
Target Start/End: Complemental strand, 35723474 - 35723397
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaata-acataattcagtgtaattata 404  Q
    ||||||||||||||| | ||||||||||| ||||||  |||||||||| |  ||||| |||||||||| ||||||||||    
T  35723474 gatacggacacgacatg-acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattata 35723397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 28720848 - 28720916
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaa 399  Q
    |||||||||||||| ||||||||| | ||||||| |||||||||| || |||| | ||||| ||||||||    
T  28720848 acggacacgacacgaacactgacatgccgacacagctaataatttgaa-aaatcatataatgcagtgtaa 28720916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 34306893 - 34306813
Alignment:
Q  327 gatacggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| | || |||||||| ||| |||||||||||||||||| || |||| | |||||  |||||||||| |||||    
T  34306893 gatacggacacaatacagacactgatacgccgacacaactaataatttgaa-aaatcagataatgtagtgtaattacaagtg 34306813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 357 - 408
Target Start/End: Complemental strand, 715668 - 715616
Alignment:
Q  357 cgacacaactaataatttaaagaaa-taacataattcagtgtaattataagtg 408  Q
    ||||||| ||||||||||||| ||| | ||||||||||||||||||| |||||    
T  715668 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtg 715616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 11596425 - 11596361
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||| ||| | ||| | |||||||||| || |||| ||||||||||||||||||| |||||    
T  11596425 gacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtg 11596361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 15029751 - 15029811
Alignment:
Q  344 gacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||||  |||||  |||||||||| || | || |||||||||||||||||||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattata 15029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 16303351 - 16303275
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||| ||||||||||||||| ||||| |  ||||| ||| || |||| | |||||| |||||||||| |||||    
T  16303351 ggacacgatacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtg 16303275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 485
Target Start/End: Original strand, 35161089 - 35161153
Alignment:
Q  421 agagtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||| |||||||||||||||||||| | ||||| |||||| | |  |||||| |||||||||    
T  35161089 agagtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcat 35161153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 178905 - 178827
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaat-aacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || |||| | |||||||||||||||||| |||||    
T  178905 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtg 178827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 408
Target Start/End: Complemental strand, 192333 - 192258
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||| ||||||||||||||| ||||||   ||||||||| |  |||| ||||||||| ||||||||| |||||    
T  192333 gacacgatacggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtg 192258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 20145 - 20222
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  20145 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtg 20222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 3933 - 3780
Alignment:
Q  333 gacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaaca 431  Q
    |||||||||| |||||||| | | ||||||   |||||||||||| |||| ||||||||||||||||||| ||||| | || ||||||| | |||| |||    
T  3933 gacacgacacagacactgatatgccgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggaca 3834  T
Q  432 cgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||| |||||||||  |  ||||||||||| | |||||||||  ||||||||    
T  3833 cgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcat 3780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 19548 - 19625
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||||| |||||    
T  19548 acggacacgacactgacactgacacgccgatacaactaataatttgaa-aaatcacataattcagtgtaattacaagtg 19625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 23392 - 23470
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||| |||||||||||| |||||||  |||||| | ||| |||| |||||||||||||||||||||||||    
T  23392 acggacacgacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtg 23470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 23483 - 23561
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaa-taacataattcagtgtaattataagtg 408  Q
    ||||||||||||  ||||||||||  |||||||  |||||| ||||| ||| | |||||||||||||||||||||||||    
T  23483 cggacacgacacatacactgacacaccgacacagttaataacttaaaaaaaatcacataattcagtgtaattataagtg 23561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 51791 - 51861
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||||||||||||||| ||||||| |||||||||| || |||| ||||||||||||||||||| |||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtg 51861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 485
Target Start/End: Complemental strand, 8707 - 8566
Alignment:
Q  345 acactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtcc 443  Q
    ||||||||| | |||||||||||||||||| || | || ||||||||| || |||||| || || |||| ||||||  |  ||| |||||| ||||||||    
T  8707 acactgacatgccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtcc 8608  T
Q  444 gacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||| |  ||||||||||||| ||||||||| |||||||||    
T  8607 gacactggtacacgcctaattcgaggagtgtccgtgcttcat 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 331 - 402
Target Start/End: Original strand, 46655 - 46726
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    ||||||||||||||||| ||||||| |||||||  ||||||||| || |||| |||||||||||||||||||    
T  46655 cggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 45617 - 45539
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaata-acataattcagtgtaattataagtg 408  Q
    ||||||| |||||||||||||||||||||||||| |||| || |||| ||| | ||||||||||||||||||| |||||    
T  45617 cggacacaacacggacactgacacgtcgacacaattaattatctaaaaaaaaatacataattcagtgtaattacaagtg 45539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 70246 - 70328
Alignment:
Q  327 gatacggacacga-cacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| | ||| ||||| |||| |||||||||  ||||||||| || ||||||||||||||||||||||||||||||    
T  70246 gatacggacacaaacacagacacagacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtg 70328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 8639 - 8716
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||   |||| ||||| |||||| ||||||||||||    
T  8639 cggacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtg 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 350 - 402
Target Start/End: Original strand, 8002 - 8054
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||| |||||||||||||||||| || |||| | ||||| |||||||||||    
T  8002 gacacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 8771 - 8848
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| || |||| | || ||| |||||||||| |||||    
T  8771 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtg 8848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 485
Target Start/End: Original strand, 71709 - 71853
Alignment:
Q  344 gacactgacacgtcgacacaactaataattt--aaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtg 440  Q
    |||||||||||| ||||||| ||||||||||  ||| |||| ||| |||||||||||||||  |||| | || ||||||  | |||| |||| |||||||    
T  71709 gacactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtg 71808  T
Q  441 tccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||| |  ||||| ||||| | ||||||||| |||||||||    
T  71809 tccgacaccgggacacgactaatccgaggagtgtcggtgcttcat 71853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 225354 - 225277
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||||||||||| |||||||  ||||||||| |  |||| ||||||| || ||||||||||||||    
T  225354 cggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtg 225277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 402
Target Start/End: Original strand, 13380 - 13444
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||||||||||||||| |||||||||||||||||| |  |||| ||||||||||||| |||||    
T  13380 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 402
Target Start/End: Complemental strand, 21947 - 21883
Alignment:
Q  338 gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||||||||||||||| |||||||||||||||||| |  |||| ||||||||||||| |||||    
T  21947 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 21883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 14522 - 14580
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| |||||||||||||||||| || |||| ||||||||||||||||||| |||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 485
Target Start/End: Complemental strand, 263453 - 263303
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacga 434  Q
    |||||||||||||||||| ||| ||||  |||||||||| |  |||  ||||||||||||||||||||||||| | || ||||||  | |||  ||||||    
T  263453 acgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacga 263354  T
Q  435 cacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    ||||||| ||| ||    ||||||||||| | ||||||||| ||| |||||    
T  263353 cacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 130455 - 130532
Alignment:
Q  331 cggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||| ||||| | |||||||  ||||| ||| || |||| ||||||||||||||||||| |||||    
T  130455 cggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtg 130532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 485
Target Start/End: Complemental strand, 6083 - 5927
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcga 428  Q
    ||||||||| || |||||| |||||| ||| ||| |||||  ||| |  |||| ||| ||| ||||||||||||| ||| |||| |||| |  | |||||    
T  6083 acggacacggcatggacaccgacacgccgatacatctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcga 5984  T
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||| |||||||  |||||||| || | ||||||||| |||| ||||    
T  5983 acacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgcctcat 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 33430 - 33378
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaatta 402  Q
    |||||| ||||||| |||||||||| || ||||||||||||||||||||||||    
T  33430 gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaatta 33378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 408
Target Start/End: Complemental strand, 7108 - 7041
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||| ||||||||||| |||||||||| || |||| |||||||| ||| |||||| |||||    
T  7108 acggacactgatacgtcgacacagctaataatttgaaaaaattacataatttagtataattacaagtg 7041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 92790 - 92857
Alignment:
Q  341 acggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||| ||||||  |||||||||| |  |||| ||||||||||||||||||| |||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtg 92857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 123612 - 123678
Alignment:
Q  345 acactgacacgtcgacacaactaataatttaaaga---aataacataattcagtgtaattataagtg 408  Q
    ||||||||||| | ||||| ||||||||||||| |   ||| ||||||||||||||||||| |||||    
T  123612 acactgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtg 123678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 545 - 471
Alignment:
Q  334 acacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||| |||||||||||| ||| ||||||  |||||||||| || |||| ||| ||||||||||||||| |||||    
T  545 acacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtg 471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 7378 - 7320
Alignment:
Q  350 gacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    |||||| ||||||||||||||||||  | |||| |||||||| ||||||||||||||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtg 7320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 485
Target Start/End: Complemental strand, 4971 - 4823
Alignment:
Q  330 acggacacgacacggacactgacacgtcgacacaactaataatttaaagaaa-taacataattcagtgtaattataagtgc-ggtatcgtgttagagtcg 427  Q
    |||||||||||||  || || ||||  ||||||| ||||||||||||| ||| | ||||||||||||||||||| |||||  ||| || |||            
T  4971 acggacacgacacatactctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgt-------- 4880  T
Q  428 aacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
     ||||||||| ||||||||||||  ||||||||||| | ||||||||| |||||||||    
T  4879 -acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 4823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 485
Target Start/End: Original strand, 8660 - 8718
Alignment:
Q  427 gaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||||||||||||||||||||| |  | ||||||||| | ||||||||| |||||||||    
T  8660 gaacacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcat 8718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 448
Target Start/End: Complemental strand, 44563 - 44493
Alignment:
Q  379 aaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacac 448  Q
    |||| ||||||||||||||||||||| ||| |||||||||||  | || | |||| |||||||||||||||    
T  44563 aaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacac 44493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 53201 - 53271
Alignment:
Q  379 aaataacataattcagtgtaattataagtg-cggtatcgtgttagagtcgaacacgacacgtgtccgacac 448  Q
    |||| ||||||||||||||||||||||||| ||||  |||||  | |||| ||| ||||||||||||||||    
T  53201 aaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacac 53271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 17808 - 17758
Alignment:
Q  358 gacacaactaataatttaaagaaataacataattcagtgtaattataagtg 408  Q
    ||||||||||||||||| || |||| |||||||| |||||||||| |||||    
T  17808 gacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtg 17758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 5039 - 4978
Alignment:
Q  424 gtcgaacacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgcttcat 485  Q
    |||| |||||||||||||||||||  |  ||| ||||||| | |||||||||||||||||||    
T  5039 gtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcat 4978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 26360 - 26428
Alignment:
Q  327 gatacggacac--gacacggacactgacacgtcgacacaactaataatttaaagaaataacataattca 393  Q
    |||||||||||  ||||| |||| |||||||||||||| ||||||||||| |  |||| ||||||||||    
T  26360 gatacggacactagacacagacagtgacacgtcgacaccactaataatttgagaaaatcacataattca 26428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 1013 - 1081
Alignment:
Q  336 acgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||| ||| |||||||  ||||||  |||||||||| || |||| |||||||||||||||| ||||    
T  1013 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactata 1081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 481
Target Start/End: Original strand, 3000 - 3052
Alignment:
Q  429 acacgacacgtgtccgacacagcaacacgcctaattctaggagtgtctgtgct 481  Q
    ||||||||||||| |||||| | |||||||||||| | ||||||||| |||||    
T  3000 acacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgct 3052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 90817 - 90889
Alignment:
Q  332 ggacacgacacggacactgacacgtcgacacaactaataatttaaagaaataacataattcagtgtaattata 404  Q
    ||||||||||| |||||||||||  | |||| | ||||||||| |  |||| | |||||||||||||||||||    
T  90817 ggacacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattata 90889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University