View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4625_low_5 (Length: 238)
Name: NF4625_low_5
Description: NF4625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4625_low_5 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 41236132 - 41236353
Alignment:
| Q |
17 |
agagaaaaaacaaataacttcaactaatgtggttggggaagcataaaggaaaatttgcaagcgtgtatagttttatatacatatatatgatcgtagtatg |
116 |
Q |
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| T |
41236132 |
agagaaaaaacaaataacttcaactaatgtggttggggaagcataaaggaaaatgtgcaagcgtgtatagttttatatacatatatatgatcgtagtatg |
41236231 |
T |
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| Q |
117 |
aatcaaggctgtcaaaatcgagtttaaaaactcgcggtttctctataacgagagtttacttgatattaaaataatatatacatgacaatgacatatactt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41236232 |
aatcaaggctgtcaaaatcgagtttaaaaactcgcggtttctctataacgagagtttacttgatattaaaataatatatacatgacaatgacatatactt |
41236331 |
T |
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| Q |
217 |
atatacattactgtaactatat |
238 |
Q |
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|||||||| ||||||||||||| |
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| T |
41236332 |
atatacatgactgtaactatat |
41236353 |
T |
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