View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4627-Insertion-11 (Length: 305)
Name: NF4627-Insertion-11
Description: NF4627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4627-Insertion-11 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 8 - 305
Target Start/End: Original strand, 30526740 - 30527037
Alignment:
| Q |
8 |
ctaagactatgtttgaatcgatgaaattaagcggaatcaagttgtatagagttatattcatttgtttggaattctataaattaatgaagtgaaatagaat |
107 |
Q |
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| T |
30526740 |
ctaagactatgtttgaatcgatgaaattaagcgaaatcaagttgtatagagttatattcatttgtttggaattctataaattaatgaagtgaaatgaaat |
30526839 |
T |
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| Q |
108 |
ataatggaattcattgcattcatatcatcctctcgtattatttttcattccccaatttgataaatagagtatacaatagaaccaaatatattgattaaat |
207 |
Q |
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|||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30526840 |
ataatgaaattcattgcgttcatatcatcctctcatattatttttcattccccaaattgataaatagagtatacaatagaaccaaatatattgattaaat |
30526939 |
T |
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| Q |
208 |
aataactatttgatcatgtatcatttctttttctctttaatcatatattcttcatctgatccagatttcttcttctccttgtatggatccctctcccg |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| |
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| T |
30526940 |
aataactatttgatcatgtatcatttctttttctctttagtcatatatacttcatctgatgcagatttattcttctccttgtatggatccctctcccg |
30527037 |
T |
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