View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4627-Insertion-2 (Length: 974)

Name: NF4627-Insertion-2
Description: NF4627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4627-Insertion-2
NF4627-Insertion-2
[»] chr1 (64 HSPs)
chr1 (8-974)||(4362784-4363750)
chr1 (27-87)||(44422670-44422730)
chr1 (13-87)||(44032038-44032112)
chr1 (13-79)||(45999335-45999401)
chr1 (13-90)||(34179908-34179985)
chr1 (13-77)||(49517027-49517091)
chr1 (13-60)||(15360851-15360898)
chr1 (20-87)||(48830115-48830182)
chr1 (13-79)||(4276683-4276749)
chr1 (16-78)||(27738228-27738290)
chr1 (16-90)||(52286638-52286712)
chr1 (13-74)||(6031531-6031592)
chr1 (14-87)||(18434517-18434590)
chr1 (16-81)||(33527192-33527257)
chr1 (118-197)||(23373239-23373319)
chr1 (118-192)||(15581318-15581393)
chr1 (13-153)||(30259457-30259600)
chr1 (10-116)||(44940297-44940401)
chr1 (13-107)||(3924581-3924675)
chr1 (13-87)||(6074431-6074505)
chr1 (18-88)||(37272624-37272694)
chr1 (10-59)||(4200183-4200232)
chr1 (10-87)||(7273978-7274055)
chr1 (13-79)||(14630013-14630081)
chr1 (10-79)||(17420157-17420226)
chr1 (13-82)||(26630420-26630489)
chr1 (13-74)||(30371105-30371166)
chr1 (14-82)||(7218118-7218186)
chr1 (27-87)||(17269221-17269281)
chr1 (27-79)||(25006081-25006133)
chr1 (13-81)||(25479538-25479606)
chr1 (13-77)||(28467356-28467420)
chr1 (13-86)||(38867871-38867946)
chr1 (13-65)||(44936651-44936703)
chr1 (35-87)||(47960663-47960715)
chr1 (118-191)||(49521732-49521811)
chr1 (13-92)||(4622050-4622129)
chr1 (35-90)||(6602329-6602384)
chr1 (36-79)||(12564921-12564964)
chr1 (12-79)||(15566683-15566750)
chr1 (16-59)||(28788605-28788648)
chr1 (19-82)||(30257646-30257709)
chr1 (10-73)||(46980182-46980245)
chr1 (29-79)||(8130409-8130459)
chr1 (12-78)||(10586420-10586486)
chr1 (119-192)||(16980868-16980942)
chr1 (17-79)||(18420901-18420963)
chr1 (41-87)||(25005836-25005882)
chr1 (19-89)||(45205031-45205101)
chr1 (10-60)||(45990124-45990174)
chr1 (117-197)||(5157135-5157216)
chr1 (26-86)||(6231856-6231917)
chr1 (36-81)||(6279379-6279424)
chr1 (10-87)||(6933000-6933077)
chr1 (13-82)||(9656607-9656676)
chr1 (18-107)||(10439648-10439737)
chr1 (17-78)||(10581125-10581186)
chr1 (19-88)||(12477325-12477394)
chr1 (27-60)||(15799675-15799708)
chr1 (19-79)||(23544686-23544747)
chr1 (123-192)||(29904821-29904890)
chr1 (13-86)||(37842395-37842468)
chr1 (17-90)||(42556667-42556740)
chr1 (15-87)||(49365800-49365870)
[»] chr5 (40 HSPs)
chr5 (13-107)||(14295463-14295557)
chr5 (43-108)||(32408610-32408675)
chr5 (16-191)||(32172613-32172791)
chr5 (10-60)||(583839-583889)
chr5 (21-73)||(32059642-32059694)
chr5 (11-87)||(36639477-36639553)
chr5 (13-60)||(35135728-35135775)
chr5 (15-70)||(39750102-39750157)
chr5 (118-191)||(37611147-37611221)
chr5 (118-191)||(37787877-37787951)
chr5 (13-58)||(29116998-29117043)
chr5 (34-87)||(33234339-33234392)
chr5 (18-87)||(36539708-36539777)
chr5 (14-58)||(985591-985635)
chr5 (18-86)||(9202788-9202856)
chr5 (124-164)||(14599332-14599372)
chr5 (14-78)||(16889693-16889757)
chr5 (15-79)||(26516359-26516423)
chr5 (13-53)||(28586839-28586879)
chr5 (15-87)||(38047894-38047966)
chr5 (65-162)||(12242672-12242771)
chr5 (17-87)||(18543235-18543306)
chr5 (13-76)||(39128596-39128659)
chr5 (13-76)||(39823171-39823234)
chr5 (20-79)||(41277397-41277456)
chr5 (37-79)||(7319325-7319367)
chr5 (144-197)||(10771814-10771868)
chr5 (118-191)||(11095427-11095501)
chr5 (13-79)||(12975304-12975370)
chr5 (14-80)||(15003560-15003626)
chr5 (41-87)||(16945022-16945068)
chr5 (21-90)||(26209449-26209519)
chr5 (13-107)||(29588837-29588930)
chr5 (13-79)||(38728331-38728397)
chr5 (8-81)||(41957496-41957567)
chr5 (10-60)||(42181158-42181208)
chr5 (13-78)||(18704084-18704148)
chr5 (34-87)||(35553227-35553280)
chr5 (13-54)||(37063146-37063187)
chr5 (16-77)||(40159779-40159840)
[»] chr2 (44 HSPs)
chr2 (10-79)||(18962085-18962154)
chr2 (19-192)||(43141834-43142011)
chr2 (13-90)||(10143129-10143206)
chr2 (13-82)||(17952745-17952814)
chr2 (13-86)||(33256697-33256770)
chr2 (16-79)||(11513858-11513921)
chr2 (13-102)||(42817400-42817489)
chr2 (20-79)||(5043607-5043666)
chr2 (13-205)||(9478256-9478451)
chr2 (13-84)||(13866846-13866917)
chr2 (10-81)||(22681230-22681301)
chr2 (10-56)||(3458611-3458657)
chr2 (10-76)||(9551533-9551599)
chr2 (119-192)||(9996803-9996877)
chr2 (13-87)||(30537566-30537640)
chr2 (16-90)||(37292383-37292457)
chr2 (41-86)||(680488-680533)
chr2 (16-81)||(9556199-9556264)
chr2 (14-79)||(14666506-14666571)
chr2 (41-86)||(25800814-25800859)
chr2 (14-87)||(28803545-28803618)
chr2 (18-75)||(33942112-33942169)
chr2 (43-107)||(1056372-1056436)
chr2 (21-92)||(7103516-7103588)
chr2 (14-58)||(14209235-14209279)
chr2 (27-79)||(18066099-18066151)
chr2 (17-81)||(29429802-29429866)
chr2 (13-73)||(29430713-29430772)
chr2 (13-81)||(34054946-34055014)
chr2 (10-74)||(34339860-34339924)
chr2 (14-73)||(20258453-20258512)
chr2 (120-198)||(25609862-25609941)
chr2 (13-60)||(31740025-31740072)
chr2 (13-60)||(33192150-33192197)
chr2 (13-84)||(37053551-37053622)
chr2 (36-79)||(43205289-43205332)
chr2 (13-87)||(3673764-3673838)
chr2 (13-192)||(6988072-6988258)
chr2 (41-87)||(15866707-15866753)
chr2 (120-197)||(22878164-22878242)
chr2 (19-73)||(35539686-35539740)
chr2 (10-59)||(6546932-6546981)
chr2 (120-192)||(14277824-14277897)
chr2 (34-87)||(37276724-37276777)
[»] chr4 (54 HSPs)
chr4 (17-90)||(54325073-54325146)
chr4 (8-153)||(53155216-53155359)
chr4 (10-77)||(55870390-55870457)
chr4 (17-79)||(927437-927499)
chr4 (10-80)||(43372015-43372085)
chr4 (13-86)||(51630068-51630141)
chr4 (118-192)||(27123283-27123358)
chr4 (13-107)||(3175908-3176002)
chr4 (19-81)||(44319912-44319974)
chr4 (13-75)||(53626733-53626795)
chr4 (10-87)||(10192238-10192315)
chr4 (34-87)||(23819067-23819120)
chr4 (15-75)||(22662298-22662358)
chr4 (15-75)||(22666777-22666837)
chr4 (13-77)||(49085946-49086010)
chr4 (35-86)||(20907326-20907377)
chr4 (21-107)||(7694029-7694115)
chr4 (13-90)||(30338627-30338705)
chr4 (13-74)||(8130131-8130192)
chr4 (122-190)||(18628486-18628555)
chr4 (34-87)||(21157746-21157799)
chr4 (13-82)||(26520273-26520342)
chr4 (13-74)||(29373939-29374000)
chr4 (38-79)||(36048515-36048556)
chr4 (14-78)||(6978757-6978821)
chr4 (13-49)||(23815327-23815363)
chr4 (26-82)||(24091433-24091489)
chr4 (13-73)||(24929450-24929510)
chr4 (13-61)||(30024657-30024705)
chr4 (13-77)||(30207620-30207683)
chr4 (13-57)||(54327518-54327562)
chr4 (13-60)||(4071839-4071886)
chr4 (123-197)||(23676765-23676840)
chr4 (13-60)||(27623592-27623639)
chr4 (19-54)||(31034655-31034690)
chr4 (35-102)||(42866047-42866114)
chr4 (14-81)||(46415837-46415904)
chr4 (118-191)||(4691912-4691986)
chr4 (14-80)||(18630638-18630704)
chr4 (17-79)||(29194450-29194512)
chr4 (8-66)||(30743317-30743375)
chr4 (27-81)||(30877167-30877221)
chr4 (119-192)||(33534100-33534174)
chr4 (28-78)||(44138712-44138762)
chr4 (13-79)||(49219096-49219162)
chr4 (13-78)||(6364106-6364171)
chr4 (118-167)||(12816999-12817048)
chr4 (20-81)||(19429533-19429594)
chr4 (13-58)||(20936070-20936115)
chr4 (13-78)||(21953230-21953295)
chr4 (121-197)||(25717660-25717737)
chr4 (120-197)||(27330002-27330079)
chr4 (13-90)||(35958612-35958689)
chr4 (14-75)||(36460544-36460605)
[»] chr6 (36 HSPs)
chr6 (13-197)||(281774-281961)
chr6 (13-82)||(22742323-22742392)
chr6 (120-192)||(24782257-24782327)
chr6 (10-90)||(2027442-2027522)
chr6 (118-192)||(2460082-2460157)
chr6 (13-79)||(1402953-1403019)
chr6 (17-87)||(3155137-3155207)
chr6 (13-82)||(33068604-33068674)
chr6 (35-88)||(22691558-22691611)
chr6 (13-74)||(29274281-29274342)
chr6 (8-81)||(30523612-30523684)
chr6 (13-80)||(4006671-4006738)
chr6 (19-77)||(10154184-10154242)
chr6 (10-76)||(33259770-33259836)
chr6 (10-107)||(2206544-2206641)
chr6 (22-82)||(25426136-25426196)
chr6 (28-87)||(3168300-3168359)
chr6 (12-79)||(3181115-3181182)
chr6 (13-60)||(7785808-7785855)
chr6 (13-76)||(9093606-9093669)
chr6 (69-197)||(34939526-34939657)
chr6 (13-107)||(2514659-2514753)
chr6 (13-79)||(3169292-3169358)
chr6 (13-75)||(3204593-3204655)
chr6 (14-56)||(7713983-7714025)
chr6 (43-85)||(10860958-10861000)
chr6 (13-87)||(26491631-26491705)
chr6 (41-79)||(28088269-28088307)
chr6 (118-164)||(32917261-32917307)
chr6 (10-84)||(33887784-33887858)
chr6 (10-92)||(33911316-33911397)
chr6 (18-87)||(3785739-3785808)
chr6 (46-87)||(7149512-7149553)
chr6 (34-87)||(18264307-18264360)
chr6 (119-191)||(27857423-27857496)
chr6 (118-167)||(32577943-32577992)
[»] chr8 (32 HSPs)
chr8 (8-82)||(30013170-30013244)
chr8 (21-153)||(6509274-6509408)
chr8 (10-87)||(42764220-42764298)
chr8 (27-192)||(30191072-30191240)
chr8 (10-85)||(3112089-3112164)
chr8 (22-87)||(42215345-42215410)
chr8 (15-87)||(787145-787217)
chr8 (17-81)||(34770853-34770917)
chr8 (16-87)||(4763878-4763949)
chr8 (28-192)||(11415126-11415293)
chr8 (17-87)||(12224938-12225008)
chr8 (20-78)||(33209268-33209326)
chr8 (10-60)||(42237488-42237538)
chr8 (13-90)||(1470892-1470969)
chr8 (10-79)||(9836901-9836970)
chr8 (120-188)||(25881350-25881419)
chr8 (41-90)||(41208870-41208919)
chr8 (10-79)||(41336692-41336761)
chr8 (34-81)||(10075596-10075643)
chr8 (27-90)||(29973052-29973115)
chr8 (15-82)||(34080310-34080377)
chr8 (43-90)||(41309772-41309819)
chr8 (20-74)||(12361156-12361210)
chr8 (13-79)||(13561359-13561425)
chr8 (13-107)||(28769358-28769452)
chr8 (10-60)||(34788493-34788543)
chr8 (16-81)||(4510988-4511053)
chr8 (13-90)||(11188191-11188268)
chr8 (10-59)||(13410262-13410311)
chr8 (41-90)||(31884579-31884628)
chr8 (13-82)||(43569118-43569186)
chr8 (18-78)||(44865612-44865673)
[»] chr7 (42 HSPs)
chr7 (10-87)||(17989062-17989139)
chr7 (13-89)||(5006546-5006622)
chr7 (16-166)||(4966116-4966268)
chr7 (10-90)||(7623092-7623172)
chr7 (10-81)||(28340889-28340960)
chr7 (14-197)||(44151402-44151592)
chr7 (13-77)||(1417221-1417285)
chr7 (118-197)||(3019847-3019927)
chr7 (28-80)||(5369737-5369789)
chr7 (118-193)||(36598286-36598362)
chr7 (13-73)||(39551601-39551661)
chr7 (13-76)||(9527140-9527203)
chr7 (13-192)||(33894580-33894766)
chr7 (10-81)||(38010668-38010739)
chr7 (15-81)||(21453253-21453319)
chr7 (13-79)||(27481341-27481407)
chr7 (118-164)||(36537972-36538018)
chr7 (13-79)||(46825055-46825121)
chr7 (21-86)||(12110325-12110390)
chr7 (18-79)||(27548225-27548286)
chr7 (13-82)||(40689030-40689099)
chr7 (13-80)||(23434204-23434272)
chr7 (17-85)||(23918918-23918986)
chr7 (11-87)||(29363473-29363549)
chr7 (15-87)||(34441048-34441120)
chr7 (8-60)||(45777237-45777289)
chr7 (18-57)||(2012683-2012722)
chr7 (18-57)||(2030671-2030710)
chr7 (125-191)||(8427084-8427151)
chr7 (13-80)||(22759143-22759210)
chr7 (17-76)||(31002722-31002781)
chr7 (119-162)||(47427265-47427308)
chr7 (17-79)||(2048088-2048150)
chr7 (13-79)||(28165048-28165114)
chr7 (13-78)||(992027-992092)
chr7 (34-87)||(1350281-1350334)
chr7 (118-163)||(27626084-27626129)
chr7 (13-66)||(35536064-35536117)
chr7 (18-107)||(39505919-39506007)
chr7 (13-54)||(39591539-39591580)
chr7 (144-192)||(40734749-40734798)
chr7 (37-86)||(46104342-46104391)
[»] chr3 (45 HSPs)
chr3 (10-164)||(25182947-25183104)
chr3 (13-135)||(24887273-24887396)
chr3 (13-80)||(38462238-38462305)
chr3 (19-87)||(20502107-20502176)
chr3 (22-82)||(25453903-25453963)
chr3 (10-87)||(33965528-33965607)
chr3 (10-78)||(37689432-37689500)
chr3 (13-79)||(22232783-22232849)
chr3 (27-197)||(41452494-41452667)
chr3 (13-58)||(49586984-49587029)
chr3 (16-92)||(52618963-52619039)
chr3 (20-79)||(2201092-2201151)
chr3 (14-81)||(40122798-40122864)
chr3 (10-87)||(1816537-1816614)
chr3 (10-79)||(14145866-14145935)
chr3 (125-197)||(24158442-24158515)
chr3 (41-86)||(33405207-33405252)
chr3 (17-90)||(36646418-36646491)
chr3 (13-54)||(53736185-53736226)
chr3 (13-73)||(1395628-1395688)
chr3 (130-197)||(22667479-22667547)
chr3 (130-197)||(22724118-22724186)
chr3 (10-86)||(52440702-52440778)
chr3 (118-165)||(2321242-2321289)
chr3 (13-60)||(8007761-8007808)
chr3 (13-60)||(20192672-20192719)
chr3 (21-76)||(23785220-23785275)
chr3 (8-55)||(23793540-23793587)
chr3 (13-60)||(42038946-42038993)
chr3 (8-81)||(1217845-1217916)
chr3 (37-75)||(2863795-2863833)
chr3 (37-87)||(22343589-22343639)
chr3 (13-87)||(28306115-28306189)
chr3 (10-60)||(28779310-28779360)
chr3 (35-73)||(33306776-33306814)
chr3 (8-78)||(37788812-37788882)
chr3 (118-191)||(49605783-49605857)
chr3 (118-178)||(1810041-1810102)
chr3 (13-78)||(24235731-24235796)
chr3 (16-77)||(31337450-31337511)
chr3 (18-78)||(34254856-34254917)
chr3 (13-78)||(36783382-36783447)
chr3 (34-79)||(43875626-43875671)
chr3 (13-54)||(51278229-51278270)
chr3 (118-159)||(53735937-53735978)
[»] scaffold0024 (1 HSPs)
scaffold0024 (13-195)||(27533-27718)
[»] scaffold0428 (1 HSPs)
scaffold0428 (10-76)||(3858-3924)
[»] scaffold0141 (1 HSPs)
scaffold0141 (125-191)||(9710-9777)
[»] scaffold0110 (1 HSPs)
scaffold0110 (123-192)||(4154-4224)
[»] scaffold0020 (1 HSPs)
scaffold0020 (13-107)||(159992-160085)


Alignment Details
Target: chr1 (Bit Score: 939; Significance: 0; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 939; E-Value: 0
Query Start/End: Original strand, 8 - 974
Target Start/End: Complemental strand, 4363750 - 4362784
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4363750 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 4363651  T
Q  108 caatttatgccatgtcataagttgtttcgataagcgctctcaaacaatctcacaagtattatgtaagtagataagctcaaataaggcaatgtgaacaggt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4363650 caatttatgccatgtcataagttgtttcgataagcgctctcaaacaatctcacaagtattatgtaagtagataagctcaaataaggcaatgcgaacaggt 4363551  T
Q  208 ttttagtttaaaatgaacaatactagtcgtcgatgcataaatcaatgattgatattgtatggacatgcatagcaaatgattaatatattgaaatgtcaac 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4363550 ttttagtttaaaatgaacaatactagtcgtcgatgcataaatcaatgattgatattgtatggacatgcatagcaaatcattaatatattgaaatgtcaac 4363451  T
Q  308 cattgattttctcacatcataggaggaaaattcttcctacttctattcctctaaagtctttaaaacgataacaaattgtgtcactttgtcatcttccagg 407  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4363450 cattgattttctgacatcataggaggaaaattcttcctacttctattcctctaaagtctttaaaacgataacaaattgtgtcactttgtcatcttccagg 4363351  T
Q  408 gatatcaccactgcgtttcctagttttattttcaaatcagaagctggaaattgagaagaaaatgttttattgtctatttgaggcaaatgattggattggt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4363350 gatatcaccactgcgtttcctagttttattttcaaatcagaagctggaaattgagaagaaaatgttttattgtctatttgaggcaaatgattggattggt 4363251  T
Q  508 tattgctgtaaatggtaacaacattggtaatttgttgacaaacaatcatggtaagcaacattgcatagttcctgcaatcataccctaaagacaccaagtt 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4363250 tattgctgtaaatggtaacaacattggtaatttgttgacaaacaatcatggtaagcaacattgcatagttcctgcaatcataccctaaagacaccaagtt 4363151  T
Q  608 tttatgttttgtatgtttgaaggaacattttttgaaccaacaaaaatatttgtagcctataattcataggtttgattacatgtttgttcacataaccaat 707  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4363150 tttatgttttgtatgtttgaaggaacattttttgaaccaacagaaatatttgtagcctataattcataggtttgattacatgtttgttcacataaccaat 4363051  T
Q  708 gtttttatgcattttggttccattgtacataaagagtgacgcagtgacatcttcacgtgaatcatcatgaactatttagaccaagtgtatttagtgtatt 807  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4363050 gtttttatgcattttggttccattgtacataaagagtgacgcagtgacatcttcaagtgaatcatcatgaactatttagaccaagtgtatttagtgtatt 4362951  T
Q  808 aactttatttaattttaaagcatattttgttttttgattccactaaaattaatgttggataattactcacttcaaaggtaaaattaatggaatcgggctt 907  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4362950 aactttatttaattttaaagcatattttgttttttgattccactaaaattaatgttggataattattcacttcaaaggtaaaattaatggaatcgggctt 4362851  T
Q  908 tttccatgagataagagtaagaaggattaatccacttatttctctctttattttgcttttcttctcc 974  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4362850 tttccatgagataagagcaagaaggattaatccacttatttctctctttattttgcttttcttctcc 4362784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 44422670 - 44422730
Alignment:
Q  27 aaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  44422670 aaataatctcaaactgttttcatataagctataagctatttttataagctatcctggagag 44422730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 44032112 - 44032038
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||| | |||||| |||||| |||||||||||||||||||| |||||||| |||| |||| |||||||    
T  44032112 tataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagag 44032038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 45999401 - 45999335
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||||||| | |||| ||||||||| ||||||||||||||||||| |||||| |||||||||    
T  45999401 tataacaaaagataagataaagtcaaactgctttcatataagctataaccaattttcgtaagctatc 45999335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 34179985 - 34179908
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||||||||| |||||| |||||| |||||| || |||||||||| || ||||||||| |||||||||| |||||    
T  34179985 tataacaaaagataaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaaaagttt 34179908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 49517027 - 49517091
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagcta 77  Q
    ||||||||||||| |||||| |||||| ||||||||| |||||||||| || |||||||||||||    
T  49517027 tataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 15360851 - 15360898
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  15360851 tataacaaaagataaaataaagtcaaactgttttcatataagctataa 15360898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 48830182 - 48830115
Alignment:
Q  20 aaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||| |||||| |||||||| |||||||||||||||||| || |||||||||||||| || |||||    
T  48830182 aaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctattctaaagag 48830115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 4276749 - 4276683
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||||||| | |||| |||| |||||||||| |||||||||||||| || ||||||||||||    
T  4276749 tataacaaaagataatataaagtcatactgttttcacataagctataacctgttctcataagctatc 4276683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 27738290 - 27738228
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||  | ||||||||||||||    
T  27738290 aacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 52286638 - 52286712
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    |||||||||| |||||| || ||||  |||||||||||||||||| |||||||||||||  ||| ||||||||||    
T  52286638 aacaaaagataaaataaagttaaacaattttcatataagctataaactattttcataagtcatcttgaagagttt 52286712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 6031592 - 6031531
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataag 74  Q
    |||||||||| || |||||||| ||||||||||||||| || |||||| |||||||||||||    
T  6031592 tataacaaaatataaaataatgccaaactgttttcataaaaactataagctattttcataag 6031531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 18434590 - 18434517
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||||| |||||| ||||||||| | ||||||||||||||  ||||||||| ||| ||||||| ||||    
T  18434590 ataacaaaagataaaataaagtcaaactgctctcatataagctatatgctattttcacaagttatcctggagag 18434517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 33527257 - 33527192
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||||||| |||||  |||||||||||||||||||| |||||| || |||||||||| ||||||    
T  33527257 aacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatcct 33527192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 23373319 - 23373239
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataaggcaat 197  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||  |||| | |||||| ||| ||||||||| ||||    
T  23373319 catgtcataagttgtttctataagctctcccaaacaatctcacaagtgcttatatcagtagacaagttcaaataagtcaat 23373239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 15581318 - 15581393
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataag 192  Q
    |||||||||||||||||| || ||| ||  |||||||||||||||||  |||||| |||||||||||| |||||||    
T  15581318 catgtcataagttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagtagataagctaaaataag 15581393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 30259600 - 30259457
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcat-aagctatcctgaagagtttgttgaagtaagccg-aaacaa 110  Q
    |||||||||| || |||||| ||||||||| ||| ||||||||||||| || ||| ||| |||||||| || |||| || | ||| ||||  | ||||||    
T  30259600 tataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagagcttatggaaataagttgaaaacaa 30259501  T
Q  111 ttta-tgccatgtcataagttgtttcgataagcgctctcaaaca 153  Q
    |||| || |||||| ||||||||||| |||||| || |||||||    
T  30259500 tttattgacatgtcgtaagttgtttctataagctctttcaaaca 30259457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 44940297 - 44940401
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaaca 109  Q
    ||||||| |||||||| |||||| ||||  ||||||||| ||||| |||||  | ||||||||| ||||||||||||| |||| ||| ||||| |||| |    
T  44940297 ttttatagcaaaagataaaataaagtca--ctgttttcaaataagttataagttgttttcataatctatcctgaagaggttgtggaaataagctgaaaaa 44940394  T
Q  110 atttatg 116  Q
    | |||||    
T  44940395 acttatg 44940401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 3924581 - 3924675
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    ||||||| ||||| |||| | | |||||||||||| ||||| |||| |  | |||| ||||||||||||||||||||| | ||| ||||||||||    
T  3924581 tataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaataagccgaaa 3924675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 6074431 - 6074505
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||| | |||| || |||||||||||||||||||||| |  | ||||| ||||||| |||||||||    
T  6074431 tataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagag 6074505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 37272694 - 37272624
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagt 88  Q
    |||||| | |||||| ||||| ||||||||||||||||||||| || |||||||||  ||||||| |||||    
T  37272694 caaaaggtaaaataaagtcaatctgttttcatataagctataagctgttttcataaattatcctggagagt 37272624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 4200183 - 4200232
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctata 59  Q
    |||||||||||||||| |||||| |||||  |||||||||||||||||||    
T  4200183 ttttataacaaaagataaaataaagtcaagttgttttcatataagctata 4200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 7274055 - 7273978
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||||||||| |||||| |||||| |||||||||| ||| ||||| || ||| ||||| ||| | |||||||    
T  7274055 ttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataaactaccttgaagag 7273978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 14630081 - 14630013
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatata--agctataacctattttcataagctatc 79  Q
    ||||||||||||| |||||| || | ||||||| ||||||  |||||||| ||||||||||||||||||    
T  14630081 tataacaaaagataaaataaagttacactgtttacatatataagctataagctattttcataagctatc 14630013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 17420157 - 17420226
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||| ||||||| |||||| ||| |||  |||||||||||||||||| || ||||| |||||||||    
T  17420157 ttttataagaaaagataaaataaagtcgaacaattttcatataagctataaactgttttcgtaagctatc 17420226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 26630420 - 26630489
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    |||||||||| || |||||| || ||| |||||||||||||||||||| || |||| ||| |||||||||    
T  26630420 tataacaaaaaatgaaataaagtaaaattgttttcatataagctataaactgttttgatacgctatcctg 26630489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 30371105 - 30371166
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataag 74  Q
    ||||||||||||| ||||||  ||||| ||||||||||||||||||||  | ||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataag 30371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 7218186 - 7218118
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    |||| ||||| | |||||| |||||| ||||||||||||||||||||  | ||||||||| ||||||||    
T  7218186 ataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctg 7218118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 17269221 - 17269281
Alignment:
Q  27 aaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||| |||||| ||||||||||||||| ||||  | |||||||||||||||||| ||||    
T  17269221 aaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagag 17269281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 25006133 - 25006081
Alignment:
Q  27 aaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||| |||||| ||||||||||||||||||||  | |||||||||||||||    
T  25006133 aaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 25006081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 25479538 - 25479606
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||| |||||| |||||| |||||| ||| |||||||| |||||||  | |||||||||||||||||    
T  25479538 tataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcct 25479606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 28467420 - 28467356
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagcta 77  Q
    ||||||||||||| |||||| |||||| | ||||||||||||||| ||  | |||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 38867946 - 38867871
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttca--tataagctataacctattttcataagctatcctgaaga 86  Q
    |||| ||||||||||||||| |||||| ||||||||  |||||||| ||| || |||||||||| |||| ||||||    
T  38867946 tataccaaaagattaaataaagtcaaaatgttttcatatataagctttaaactgttttcataagttatcttgaaga 38867871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 44936703 - 44936651
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctat 65  Q
    ||||||||||||| | |||| |||||||| |||||||||||||||||| ||||    
T  44936703 tataacaaaagataagataaagtcaaactattttcatataagctataatctat 44936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 47960715 - 47960663
Alignment:
Q  35 tcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||| |||||||||||||||||| |  |||||||||| ||||||||||||    
T  47960715 tcaaactattttcatataagctataagccgttttcataagttatcctgaagag 47960663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 49521811 - 49521732
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagta------ttatgtaagtagataagctcaaataa 191  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||      |||||| ||||||||| |||||||||    
T  49521811 catgtcataagttgtttccacaagctctctcaaacaatctcagaagtacttttgttatgtcagtagataatctcaaataa 49521732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 4622050 - 4622129
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgt 92  Q
    ||||||||||||| |||| |  ||||||| |||||||||||||||||| || ||| |||| |||||| || |||| ||||    
T  4622050 tataacaaaagatcaaatgaattcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgt 4622129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 6602384 - 6602329
Alignment:
Q  35 tcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||| |||||||||||| ||||||| |||||||||||| |||||| | |||||||    
T  6602384 tcaaattgttttcatatatgctataagctattttcataaactatcccgtagagttt 6602329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 12564964 - 12564921
Alignment:
Q  36 caaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||||||||||||||||||  | |||||||||||||||    
T  12564964 caaactgttttcatataagctataagttgttttcataagctatc 12564921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 15566750 - 15566683
Alignment:
Q  12 ttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||| || ||||| |||||| ||||||||||| || | |||| ||||| ||||||||||||||||||    
T  15566750 ttatagcataagataaaataaagtcaaactgttctcctttaagttataatctattttcataagctatc 15566683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 28788648 - 28788605
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctata 59  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||    
T  28788648 aacaaaggataaaataaagtcaaactgttttcatataagctata 28788605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 30257646 - 30257709
Alignment:
Q  19 aaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    ||||||| |||||| |||||||||||| |||||||||| |||  | ||||||||| ||||||||    
T  30257646 aaaagataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctg 30257709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 46980245 - 46980182
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataa 73  Q
    ||||||| |||||||| |||||| | ||||||||||||||||||| |||||  | |||||||||    
T  46980245 ttttatatcaaaagataaaataaagacaaactgttttcatataagttataaattgttttcataa 46980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 8130409 - 8130459
Alignment:
Q  29 ataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||| ||||||||||||||| |||||||||||  | |||||||||||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcataagctatc 8130459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 10586486 - 10586420
Alignment:
Q  12 ttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||||| ||||||| |||||| || ||| ||||||||||| | |||||| | |||||||||||||||    
T  10586486 ttataagaaaagataaaataaagtaaaattgttttcatatgaactataagccattttcataagctat 10586420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 16980868 - 16980942
Alignment:
Q  119 atgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataag 192  Q
    ||||| ||||||||||| |||||| |||||||| | ||||||||||| ||||||  ||| ||||| |||||||||    
T  16980868 atgtcgtaagttgtttccataagctctctcaaatagtctcacaagtacttatgttggtatataagttcaaataag 16980942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 18420963 - 18420901
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||| |||||| |||||| |||| ||||||||||||||  ||||||||| ||| ||||    
T  18420963 acaaaagataaaataaagtcaaaatgttctcatataagctatatgctattttcacaagttatc 18420901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 25005882 - 25005836
Alignment:
Q  41 tgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||||||||||  | |||||||||||||||||| ||||    
T  25005882 tgttttcatataagctataagttgttttcataagctatcctggagag 25005836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 45205031 - 45205101
Alignment:
Q  19 aaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtt 89  Q
    ||||||| |||||| |||||||| ||| ||||||||||| ||  | ||||||||||||||| || ||||||    
T  45205031 aaaagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagtt 45205101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 45990174 - 45990124
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    ||||||| |||||||| |||||| || ||| ||||||||||||||||||||    
T  45990174 ttttatatcaaaagataaaataaagtaaaattgttttcatataagctataa 45990124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 5157135 - 5157216
Alignment:
Q  117 ccatgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataaggcaat 197  Q
    |||| |||||||||||||| |||||| ||| |||||| | ||||||||  ||||||  ||||||||| ||||||||| ||||    
T  5157135 ccatctcataagttgtttctataagctctcccaaacagtttcacaagtgtttatgtccgtagataagttcaaataagtcaat 5157216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 6231917 - 6231856
Alignment:
Q  26 taaataatgtcaaactgtttt-catataagctataacctattttcataagctatcctgaaga 86  Q
    ||||||| ||||||||||||| ||||||| |||||| || ||||| ||||||| ||||||||    
T  6231917 taaataaagtcaaactgtttttcatataatctataagctgttttcgtaagctaacctgaaga 6231856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 6279379 - 6279424
Alignment:
Q  36 caaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||| ||||||| |||||||| ||| ||||||||||||||||||||    
T  6279379 caaattgttttcgtataagctttaaactattttcataagctatcct 6279424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 6933077 - 6933000
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||| || |||||| |||||| |||||||||| ||| ||| |  | |||||||||| | ||||||||||    
T  6933077 ttttataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataagttgtcctgaagag 6933000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 9656607 - 9656676
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    |||| ||||| || |||||| || ||| | |||||||||||||||||| || | ||||||||||||||||    
T  9656607 tatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctg 9656676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 10439648 - 10439737
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    |||||||| |||| | |||||| | |||||||||||||||| | |||| |||| || |||||||| ||||||| | ||| ||||| ||||    
T  10439648 caaaagataaaatgaagtcaaattattttcatataagctatcagctatattcaaaaactatcctggagagtttatggaaataagctgaaa 10439737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 10581186 - 10581125
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    ||||| ||| |||||| |||||||| ||||||| ||||||||||  | ||||||||||||||    
T  10581186 acaaaggataaaataaagtcaaacttttttcatttaagctataagttgttttcataagctat 10581125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 12477394 - 12477325
Alignment:
Q  19 aaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagt 88  Q
    ||||||| |||||| |||||||||||||||| |||| ||||  || |||| |||||||||| || |||||    
T  12477394 aaaagataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagt 12477325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 15799675 - 15799708
Alignment:
Q  27 aaataatgtcaaactgttttcatataagctataa 60  Q
    |||||| |||||||||||||||||||||||||||    
T  15799675 aaataaagtcaaactgttttcatataagctataa 15799708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 23544747 - 23544686
Alignment:
Q  19 aaaagattaaataatgtcaaactgttttcatataagcta-taacctattttcataagctatc 79  Q
    ||||||| |||| | |||||| ||||||||||||||||| ||| || |||||||||||||||    
T  23544747 aaaagataaaattaagtcaaattgttttcatataagctattaaactgttttcataagctatc 23544686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 29904821 - 29904890
Alignment:
Q  123 cataagttgtttcgataagcgctctcaaacaatctcacaagtattatgtaagtagataagctcaaataag 192  Q
    |||||| |||||  |||||  |||||||||| ||||||||   ||||| |||||||||||||||||||||    
T  29904821 cataagctgtttttataagttctctcaaacagtctcacaaaacttatgcaagtagataagctcaaataag 29904890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 37842468 - 37842395
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    |||| |||||||| |||||| || ||||||| |||  |||||||||||  | ||||||||||||||| ||||||    
T  37842468 tatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaaga 37842395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 42556740 - 42556667
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||||| ||||||  |||||||  ||| |||||||||||||  | ||||||||||||||| || |||||||    
T  42556740 acaaaagatgaaataaaatcaaactacttttatataagctataagttgttttcataagctatcatggagagttt 42556667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 49365870 - 49365800
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||| |||||  |||||| |||||||||| ||||||||| || |||  |||||||||| |||||||    
T  49365870 taacaaaagataaaatagagtcaaattgttttcatacaagctataaactgttt--ataagctatcttgaagag 49365800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 4e-22; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 14295463 - 14295557
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| || ||||| |||||||||||| |||| || | ||||||||| ||||    
T  14295463 tataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaa 14295557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 32408675 - 32408610
Alignment:
Q  43 ttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaac 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || | ||| ||||| |||||    
T  32408675 ttttcatataagctataaactattttcataagctatcctgaagagcttatggaaataagcagaaac 32408610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 32172613 - 32172791
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaacaat---t 112  Q
    |||||||||| |||| | |||||  ||||| |||||||||||||| || ||||||||||||||| ||||||  |  | ||| ||||| |||  |||   |    
T  32172613 aacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaa--aatggct 32172710  T
Q  113 tat-gccatgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataa 191  Q
    ||| | |||||||||||||||||| |||||| ||| ||||| |||||||||||  |||||  |||| ||||||||||||||    
T  32172711 tatggacatgtcataagttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataagctcaaataa 32172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 583889 - 583839
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  583889 ttttataacagaagataaaataaagtcaaactgttttcatataagctataa 583839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 32059694 - 32059642
Alignment:
Q  21 aagattaaataatgtcaaactgttttcatataagctataacctattttcataa 73  Q
    ||||| |||||| ||||||||||||||||||||||||||| || |||||||||    
T  32059694 aagataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 36639477 - 36639553
Alignment:
Q  11 tttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||||| ||||||  ||||| |||||||||| ||| ||||  || ||||||||||||||| |||||||    
T  36639477 tttataacaaaagataaaataaaatcaaaatgttttcatacaagttatagactgttttcataagctatcttgaagag 36639553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 35135775 - 35135728
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  35135775 tataacaaaagataaaataaagtcaaactattttcatataagctataa 35135728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 39750102 - 39750157
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttca 70  Q
    ||||||||||| |||||| |||||||| |||||||||||| |||||||| ||||||    
T  39750102 taacaaaagataaaataaagtcaaactattttcatataagttataacctgttttca 39750157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 37611221 - 37611147
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataa 191  Q
    ||||||| |||||||||  |||||| |||||||||||||||||||||| || ||  |||||||||| ||||||||    
T  37611221 catgtcacaagttgttttcataagctctctcaaacaatctcacaagtacttgtgccagtagataagttcaaataa 37611147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 37787951 - 37787877
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataa 191  Q
    ||||||| |||||||||  |||||| |||||||||||||||||||||| || ||  |||||||||| ||||||||    
T  37787951 catgtcacaagttgttttcataagctctctcaaacaatctcacaagtacttgtgccagtagataagttcaaataa 37787877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 29117043 - 29116998
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctat 58  Q
    ||||||||||||| |||||| |||||||||||||| ||||||||||    
T  29117043 tataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 33234339 - 33234392
Alignment:
Q  34 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||| ||||||||||||| |||||||| |||| ||| ||||||||    
T  33234339 gtcaaactgtttttatataagctataagctattttcgtaagttatgctgaagag 33234392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 36539708 - 36539777
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||| |||||| ||||| |||||||||||||||||||||  | |||| ||||| ||| ||||||||    
T  36539708 caaaagataaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagag 36539777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 985591 - 985635
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctat 58  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||    
T  985591 ataacaaaagataaaataaagtcaaactgttttcacataagctat 985635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 9202856 - 9202788
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    |||||||| |||||| || ||| ||||||||||||||| |||| || |||||||||| |||| ||||||    
T  9202856 caaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaaga 9202788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 14599372 - 14599332
Alignment:
Q  124 ataagttgtttcgataagcgctctcaaacaatctcacaagt 164  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  14599372 ataagttgtttcgataagctctctcaaacaatcttacaagt 14599332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 16889693 - 16889757
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||||||||||| || | | ||||||||||||| ||| ||||||||| || ||||||||||||||    
T  16889693 ataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctat 16889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 26516359 - 26516423
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||| |||| |||||| ||||||||  ||||||||||| ||||| || |||||||||||||||    
T  26516359 taacaatagataaaataaagtcaaactactttcatataagttataaactgttttcataagctatc 26516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 28586879 - 28586839
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataa 53  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  28586879 tataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 38047966 - 38047894
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||| |||||| |||||| | ||||||||||  |||||  || |||||||||||||||||| ||||    
T  38047966 taacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagag 38047894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 12242771 - 12242672
Alignment:
Q  65 ttttcataagctatcctgaagagtttgttgaagtaagccgaaa-caatttatgc-catgtcataagttgtttcgataagcgctctcaaacaatctcacaa 162  Q
    ||||||||||||||| || |||| || | ||||||||| |||| ||| | |||  ||||||||||||| |||| |||||| |||||||| ||||||||||    
T  12242771 ttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctctcaaataatctcacaa 12242672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 18543306 - 18543235
Alignment:
Q  17 acaaaagattaaataatgtcaaact-gttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||| ||||||||| |||||||| ||||| ||||||| |||||  | |||||||||||||||||| ||||    
T  18543306 acaaaatattaaataaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagag 18543235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 39128596 - 39128659
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagct 76  Q
    ||||||||||||| |||||| |||||| |||| ||| |||| |||||| ||||||| |||||||    
T  39128596 tataacaaaagataaaataaagtcaaattgttctcaaataaactataaactatttttataagct 39128659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 39823234 - 39823171
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagct 76  Q
    ||||||||||||| |||||| ||||||||  |||||||||||||| ||  | ||||||||||||    
T  39823234 tataacaaaagataaaataaagtcaaactactttcatataagctacaagttgttttcataagct 39823171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 41277456 - 41277397
Alignment:
Q  20 aaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||| |||||| ||||||||||||||||||||| || ||  | |||||||||||||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctatc 41277397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 7319325 - 7319367
Alignment:
Q  37 aaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||||||||||||||||| || ||||| |||||||||    
T  7319325 aaactgttttcatataagctataaactgttttcgtaagctatc 7319367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 10771868 - 10771814
Alignment:
Q  144 ctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    |||||||||||||||||||||  |||||  |||||||||||||||||||| ||||    
T  10771868 ctctcaaacaatctcacaagtgcttatgccagtagataagctcaaataagccaat 10771814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 11095501 - 11095427
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataa 191  Q
    ||||||||||| |||||| | |||  |||||||||||| ||||||||  |||||| |||||||||||| ||||||    
T  11095501 catgtcataagctgtttccacaagttctctcaaacaatatcacaagtgtttatgtcagtagataagcttaaataa 11095427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 12975304 - 12975370
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||  || ||||||  ||||| |||||||||||||||||||| || | |||||||||||||    
T  12975304 tataacaaagaataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatc 12975370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 15003626 - 15003560
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcc 80  Q
    |||||||||||| ||||||  ||||||| | ||||||||||||||||    ||||||||||||||||    
T  15003626 ataacaaaagataaaataaaatcaaactctcttcatataagctataagtggttttcataagctatcc 15003560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 16945068 - 16945022
Alignment:
Q  41 tgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||| ||||||||| |||||||||| | |||||||||||||    
T  16945068 tgttttcatagaagctataagctattttcattaactatcctgaagag 16945022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 26209519 - 26209449
Alignment:
Q  21 aagattaaataatgtcaaactgttttca-tataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||| |||||| ||| || |||||||| |||||||||||| || ||||||||||||||| ||||| ||||    
T  26209519 aagataaaataaagtccaattgttttcaatataagctataagctgttttcataagctatcatgaagtgttt 26209449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 29588837 - 29588930
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    |||||||||| || ||||||||  ||| ||||||||||||||||||||  | ||||| ||||||||  |||||||||| | ||| ||||| ||||    
T  29588837 tataacaaaatataaaataatga-aaattgttttcatataagctataaagtgttttcgtaagctatgttgaagagtttatggaaataagctgaaa 29588930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 38728331 - 38728397
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||||||   ||||  ||||||||||||| |||||||| |||  |||||||||||||||||    
T  38728331 tataacaaaagatattataaaatcaaactgttttcctataagctttaagttattttcataagctatc 38728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 41957567 - 41957496
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||||||||||||||  |||| | || ||| ||||||||| |||| ||||| || |||||||||||||||||    
T  41957567 tattttataacaaaaga--aaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatcct 41957496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 42181208 - 42181158
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    |||||||||||||||| ||| || ||||||  |||||||||||||||||||    
T  42181208 ttttataacaaaagataaaacaaagtcaaatggttttcatataagctataa 42181158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 18704148 - 18704084
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    ||||||||||||| |||||| ||||| || |||| |||||||||||||  | ||||||||||||||    
T  18704148 tataacaaaagat-aaataaagtcaagctatttttatataagctataagttgttttcataagctat 18704084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 35553280 - 35553227
Alignment:
Q  34 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||| | |||||||||||||||||| ||||||||||| ||||| ||| ||||    
T  35553280 gtcaaattcttttcatataagctataaactattttcatacgctattctggagag 35553227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 37063187 - 37063146
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataag 54  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  37063187 tataacaaaagataaaataaagtcaaactattttcatataag 37063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 40159779 - 40159840
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagcta 77  Q
    ||||||||||||| ||| |||||| |||||||||||||| |||||    |||||||||||||    
T  40159779 aacaaaagattaagtaaagtcaaattgttttcatataagttataaatcgttttcataagcta 40159840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 2e-21; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 18962154 - 18962085
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||||| ||||||||||||||||||    
T  18962154 ttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatc 18962085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 43141834 - 43142011
Alignment:
Q  19 aaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaatttat-g 116  Q
    ||||||| || ||| |||||| ||||| ||||||||||||||  | |||||||||||||||||||||||||| | ||| |||   | |||||| |||| |    
T  43141834 aaaagataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgg 43141933  T
Q  117 ccatgtcataagttgttt-cgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataag 192  Q
     ||||||||||||||||| | ||||||||| ||||||  | |||||| |  |||||| ||||||||||||||||||||    
T  43141934 gcatgtcataagttgtttcccataagcgctgtcaaactgtttcacaattgcttatgttagtagataagctcaaataag 43142011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 10143129 - 10143206
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||||||||| |||| | ||||||||||||| |||||||||||||  | ||||||||||||||| || |||||||    
T  10143129 tataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagagttt 10143206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 17952814 - 17952745
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||| ||  | ||||||||||||||||||    
T  17952814 tataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctg 17952745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 33256697 - 33256770
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    |||||||| |||| |||||| |||||||||||||||||||| |||||| |  ||||||||||| ||||||||||    
T  33256697 tataacaatagataaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctgaaga 33256770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 11513858 - 11513921
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||  | |||||||||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 11513921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 42817489 - 42817400
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagc 102  Q
    |||| |||||||| |||| | ||||| |||||||||||||||  |||| || |||||||||||||| |||||||| || | |||||||||    
T  42817489 tataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagcttatggaagtaagc 42817400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 5043666 - 5043607
Alignment:
Q  20 aaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||| |||||| |||||||||||||||||||||||| ||  | |||||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatc 5043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 9478256 - 9478451
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa-caat 111  Q
    |||||||  |||| ||||||  ||||| | |||||||||||||||||  || | ||| ||||||||| || ||||||  | ||||||||  |||| ||      
T  9478256 tataacagtagataaaataaactcaaaatattttcatataagctatatgctgtgttcgtaagctatcgtggagagttgatggaagtaagatgaaaacagc 9478355  T
Q  112 ttatgc-catgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaatgtgaacag 205  Q
    |||||  ||||| |||||||||||  |||| | |||||||||| || |||||||| ||||||  ||||||||| ||||||||| |||| |||||||    
T  9478356 ttatggacatgtaataagttgtttgcataaactctctcaaacagtcacacaagtacttatgttggtagataagttcaaataagtcaatctgaacag 9478451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 13866846 - 13866917
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaa 84  Q
    |||| |||||||| |||| | ||||||||||||| |||||| |||||| || ||||||| ||||||||||||    
T  13866846 tatagcaaaagataaaattaagtcaaactgtttttatataatctataagctcttttcattagctatcctgaa 13866917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 22681301 - 22681230
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    ||||| |||||||||| ||| || | |||| |||||||||||||||||||| || ||||||||| |||||||    
T  22681301 ttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcct 22681230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 3458611 - 3458657
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagct 56  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||    
T  3458611 ttttataacaaaagataaaataaagtcaaacttttttcatataagct 3458657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 9551533 - 9551599
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagct 76  Q
    |||||||| |||  || |||||| |||||||||||||  ||||| ||||||||||||||||||||||    
T  9551533 ttttataataaattataaaataaagtcaaactgtttttgtataaactataacctattttcataagct 9551599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 9996803 - 9996877
Alignment:
Q  119 atgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataag 192  Q
    ||||||||||||||||| |||||| ||| ||| || ||||||||||| |||||  ||| ||||||||||||||||    
T  9996803 atgtcataagttgtttctataagctctcccaagcagtctcacaagtacttatgctagttgataagctcaaataag 9996877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 30537640 - 30537566
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||| |||||| | |||| ||||||| ||||||||||||||||||| ||||| || |||||||| ||| ||||    
T  30537640 tataactaaagatcatataaagtcaaacagttttcatataagctataagctattctcgtaagctattctggagag 30537566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 37292457 - 37292383
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    |||||||||| |||||| || ||||| |||||||||||||||| |  | ||||| |||||||||||| |||||||    
T  37292457 aacaaaagataaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagttt 37292383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 680488 - 680533
Alignment:
Q  41 tgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||    
T  680488 tgttttcgtataagctataagctattttcataagctatcttgaaga 680533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 9556199 - 9556264
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||| ||| |||||| |||||  |||||||||| ||||||||| || |||||||||||||||||    
T  9556199 aacaaacgataaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctatcct 9556264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 14666506 - 14666571
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||||| |||||| ||||||||| ||||||||||| |||||  | |||||| ||||||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaagctatc 14666571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 25800814 - 25800859
Alignment:
Q  41 tgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||    
T  25800814 tgttttcatataagctataagctgttttcataagctatcttgaaga 25800859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 28803618 - 28803545
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||||| |||||| ||||||||| |||||||||||||| ||  | ||||| ||| |||||||| ||||    
T  28803618 ataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggagag 28803545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 33942112 - 33942169
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagc 75  Q
    |||||||| |||||| |||||||||||||||| ||||||||||  | |||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagc 33942169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 1056436 - 1056372
Alignment:
Q  43 ttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    ||||||||||| || ||| |||||||||||||||||| |||||||||| | ||| ||||| ||||    
T  1056436 ttttcatataacctgtaagctattttcataagctatcttgaagagtttatagaaataagctgaaa 1056372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 7103588 - 7103516
Alignment:
Q  21 aagattaaataatgtcaaactgttttcatataagctataacct-attttcataagctatcctgaagagtttgt 92  Q
    ||||| |||||| ||||||||||||| ||||||||||||| ||  ||||||||||||||| |  |||||||||    
T  7103588 aagataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatcttagagagtttgt 7103516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 14209235 - 14209279
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctat 58  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||    
T  14209235 ataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 18066099 - 18066151
Alignment:
Q  27 aaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||| || ||| |||||||||||||||||||| || |||||||||||||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctatc 18066151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 29429866 - 29429802
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||  || | ||||||| |||||||    
T  29429866 acaaaagataaaataaagtcaaactgttttcacataagctatagtctctcttcataaactatcct 29429802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 29430713 - 29430772
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataa 73  Q
    ||||||||||| |||||||| |||||||||||||| |||||||||||| || || ||||||    
T  29430713 tataacaaaag-ttaaataaagtcaaactgttttcttataagctataagctgttctcataa 29430772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 34055014 - 34054946
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    ||||||||||||| |||||| | |||||||||| |||||| | |||||  | |||||||||||||||||    
T  34055014 tataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctatcct 34054946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 34339860 - 34339924
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataag 74  Q
    ||||| |||||||||| |||||| |||||| | ||||| |||||| ||||| |||||||||||||    
T  34339860 ttttaaaacaaaagataaaataaagtcaaattattttcgtataaggtataaactattttcataag 34339924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 20258453 - 20258512
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataa 73  Q
    |||||||||||| ||||| |||| || |||||| |||||||||||||  |||||||||||    
T  20258453 ataacaaaagataaaatagtgtcgaaatgttttgatataagctataagttattttcataa 20258512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 25609862 - 25609941
Alignment:
Q  120 tgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaatg 198  Q
    |||||||||||||||| ||||||  |  ||| || ||||||||||  |||||| |||||||||||||||||||| |||||    
T  25609862 tgtcataagttgtttccataagctattccaagcagtctcacaagttcttatgttagtagataagctcaaataagccaatg 25609941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 31740072 - 31740025
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    |||||| |||||| |||||| |||||||| ||||||||||||||||||    
T  31740072 tataactaaagataaaataaagtcaaactattttcatataagctataa 31740025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 33192150 - 33192197
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    ||||||| ||||| |||||| ||||||||||||||||||||| |||||    
T  33192150 tataacataagataaaataaagtcaaactgttttcatataagttataa 33192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 37053551 - 37053622
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaa 84  Q
    ||||||| || || |||||| ||||||||||||||||||||| |||||  | ||||||| ||||||| ||||    
T  37053551 tataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttcattagctatcatgaa 37053622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 43205289 - 43205332
Alignment:
Q  36 caaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||||||||||||| ||||| || |||||||||||||||    
T  43205289 caaactgttttcatataagatataatctgttttcataagctatc 43205332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 3673764 - 3673838
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||| || |||||| || ||| |||||||||||||| |||||  | ||||||| ||||||| |||||||    
T  3673764 tataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcattagctatcttgaagag 3673838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 6988072 - 6988258
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaat 111  Q
    ||||||||||||| |||||| |||||| | ||||| ||  || |||||  | ||||||||||||||| |||||||||| | ||| ||||  | |||||||    
T  6988072 tataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataagctatcttgaagagtttatagaaataagatgaaaacaat 6988171  T
Q  112 ttatgc-----catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataag 192  Q
    |||  |     |||||||| ||  ||||| |||||| |||||||||||||||  | || ||||| | |||||||||| |||||||||    
T  6988172 ttaatcatgaacatgtcatgagaagtttctataagctctctcaaacaatctcgtaggtgattatatcagtagataagttcaaataag 6988258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 15866753 - 15866707
Alignment:
Q  41 tgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||||||||||||| | | ||||||||||||||||| ||||    
T  15866753 tgttttcatataagctataagccactttcataagctatcctggagag 15866707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 22878164 - 22878242
Alignment:
Q  120 tgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    |||||||| ||||||| |||||  ||| |||||| ||||||||||  |||||| ||| |||||||||||||||| ||||    
T  22878164 tgtcataatttgtttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaat 22878242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 35539686 - 35539740
Alignment:
Q  19 aaaagattaaataatgtcaaactgttttcatataagctataacctattttcataa 73  Q
    ||||||| ||||||  ||||||| |||||||||||| ||||| ||||||||||||    
T  35539686 aaaagataaaataaaatcaaactattttcatataagttataagctattttcataa 35539740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 6546932 - 6546981
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctata 59  Q
    |||||||||||||||| |||||| |||||| |||||  ||||||||||||    
T  6546932 ttttataacaaaagataaaataaagtcaaattgtttatatataagctata 6546981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 14277897 - 14277824
Alignment:
Q  120 tgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataag 192  Q
    |||||||||||||||| || ||| ||  |||||| ||||||||||| ||||||  |||||||| ||||||||||    
T  14277897 tgtcataagttgtttccatgagctcttccaaacactctcacaagtacttatgtccgtagataaactcaaataag 14277824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 37276724 - 37276777
Alignment:
Q  34 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||||||||||| |||||  | |||||||||| ||||||| ||||    
T  37276724 gtcaaactgttttcatataagttataagttgttttcataagttatcctggagag 37276777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 4e-19; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 54325146 - 54325073
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| |||||||| || |||||||    
T  54325146 acaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagttt 54325073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 53155216 - 53155359
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    |||||||||||||||||| |||||| ||| |||| |||||||||| ||||||| |||||||||||||||||| ||||    ||||  || ||||| ||||    
T  53155216 tattttataacaaaagat-aaataaagtcgaactattttcatatatgctataaactattttcataagctatcatgaa---cttgtgaaaataagctgaaa 53155311  T
Q  108 -caatttat-gccatgtcataagttgtttcgataagcgctctcaaaca 153  Q
     |||||||| | |||||||||||||||||  |||||| ||| ||||||    
T  53155312 gcaatttatagacatgtcataagttgtttgcataagctctcacaaaca 53155359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 55870457 - 55870390
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagcta 77  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||||||||  | |||||||||||||    
T  55870457 ttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataagcta 55870390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 927437 - 927499
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| | ||| |||||||||||    
T  927437 acaaaagatgaaataaagtcaaactgttttcatataagctataacttgtttgcataagctatc 927499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 43372085 - 43372015
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcc 80  Q
    |||||||||||||||| |||||  ||||||||||||| ||||||||||||| ||  |||||||||||||||    
T  43372085 ttttataacaaaagataaaatacagtcaaactgtttttatataagctataaactgatttcataagctatcc 43372015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 51630068 - 51630141
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    |||| |||||||| |||||| || ||| |||||| ||||||||||||| |||||||||||||||||| ||||||    
T  51630068 tatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaaga 51630141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 27123358 - 27123283
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataag 192  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||| |||||  |||  |||||||||||||||    
T  27123358 catgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataag 27123283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 3175908 - 3176002
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    |||| |||||||| |||||| |||||| ||||||||  |||| ||||| || ||||||||||||||||||||| | |||| ||| |||| |||||    
T  3175908 tatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaa 3176002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 44319912 - 44319974
Alignment:
Q  19 aaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    ||||||| |||||| ||| |||||||||||||||||||| || ||||||| ||||||||||||    
T  44319912 aaaagataaaataaagtcgaactgttttcatataagctacaagctattttgataagctatcct 44319974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 53626733 - 53626795
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagc 75  Q
    ||||||||||||| ||||||  ||||| |||||||||||||||||||| || |||||||||||    
T  53626733 tataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataagc 53626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 10192238 - 10192315
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||||||  ||||| |||||| |||||||||||||| |||||  | |||||| ||||||||||| ||||    
T  10192238 ttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagag 10192315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 23819067 - 23819120
Alignment:
Q  34 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||| |||||||    
T  23819067 gtcaaactgttttcatataagttataacatgttttcataagctatcttgaagag 23819120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 22662358 - 22662298
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagc 75  Q
    ||||| ||||| |||||| ||||||||||||||| |||| |||||| ||||||||||||||    
T  22662358 taacacaagataaaataaggtcaaactgttttcagataatctataaactattttcataagc 22662298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 22666837 - 22666777
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagc 75  Q
    ||||| ||||| |||||| ||||||||||||||| |||| |||||| ||||||||||||||    
T  22666837 taacacaagataaaataaggtcaaactgttttcagataatctataaactattttcataagc 22666777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 49085946 - 49086010
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagcta 77  Q
    ||||||||||||| ||||||||||||||| |||||||| ||| |||||  | |||||||||||||    
T  49085946 tataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataagcta 49086010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 20907326 - 20907377
Alignment:
Q  35 tcaaactgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    ||||| |||||||||||||||||||| || |||||| |||||||||||||||    
T  20907326 tcaaattgttttcatataagctataaactgttttcacaagctatcctgaaga 20907377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 7694115 - 7694029
Alignment:
Q  21 aagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    ||||| |||| | |||||||||||||  |||||||||||| || |||||||||| ||||||| ||||||| | ||| ||||| ||||    
T  7694115 aagatgaaatgaagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaa 7694029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 30338705 - 30338627
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacct-attttcataagctatcctgaagagttt 90  Q
    |||||||||||||  ||||| || |||||||||||||||||||||||| ||  |||||||||||| || || |||||||    
T  30338705 tataacaaaagatagaataaagttaaactgttttcatataagctataaactgtttttcataagctctcttggagagttt 30338627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 8130131 - 8130192
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataag 74  Q
    ||||||||||||| | |||| |||||| | |||||||||||||||||| || ||||||||||    
T  8130131 tataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcataag 8130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 18628555 - 18628486
Alignment:
Q  122 tcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaata 190  Q
    |||||||||||||  |||||| ||| |||||| ||||||||||  |||||| ||||||||||||||||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaata 18628486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 21157746 - 21157799
Alignment:
Q  34 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||||||||| ||||||||||  | |||||||| ||||||||||||||    
T  21157746 gtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagag 21157799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 26520342 - 26520273
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    ||||||||||||| |||||| || ||| ||||||| | |||||||||| ||||||| ||| |||||||||    
T  26520342 tataacaaaagatgaaataaagttaaattgttttcgtgtaagctataagctatttttatatgctatcctg 26520273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 29374000 - 29373939
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataag 74  Q
    ||||||| ||||| ||||||||||||| ||| ||||||||||||||||  | ||||||||||    
T  29374000 tataacagaagataaaataatgtcaaaatgtattcatataagctataatttgttttcataag 29373939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 36048515 - 36048556
Alignment:
Q  38 aactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  36048515 aactgttttcatataagctataagctattttcaaaagctatc 36048556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 6978821 - 6978757
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||||||||||| |||||  || ||||| ||||||||||| ||| || |||||||||||||||||    
T  6978821 ataacaaaagataaaatatagttaaactattttcatataaactacaaactattttcataagctat 6978757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 23815327 - 23815363
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcat 49  Q
    ||||||||||||| |||||||||||||||||||||||    
T  23815327 tataacaaaagataaaataatgtcaaactgttttcat 23815363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 24091433 - 24091489
Alignment:
Q  26 taaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    ||||||| |||||| | |||||||||||||||||| || |||||||||| |||||||    
T  24091433 taaataaagtcaaattattttcatataagctataaactgttttcataagttatcctg 24091489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 24929450 - 24929510
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataa 73  Q
    ||||||||||||| |||||| ||| ||||||||||||| |||||||||  | |||||||||    
T  24929450 tataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataa 24929510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 30024657 - 30024705
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataac 61  Q
    ||||||||||||| |||||| || ||| |||||||||||||||||||||    
T  30024657 tataacaaaagataaaataaagtaaaattgttttcatataagctataac 30024705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 30207683 - 30207620
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagcta 77  Q
    |||||||||| || ||||||  ||||||||||||||||||||||||||  | |||||||||||||    
T  30207683 tataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagcta 30207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 54327562 - 54327518
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagcta 57  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||    
T  54327562 tataacaaaagataaaacaaagtcaaactgttttcatataagcta 54327518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 4071839 - 4071886
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    ||||||||||||| |||||| |||||| | ||||||||||||||||||    
T  4071839 tataacaaaagataaaataaagtcaaattattttcatataagctataa 4071886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 23676765 - 23676840
Alignment:
Q  123 cataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    ||||||||||||| ||||||  |||||||||||| || ||||| ||||  ||||||||||| ||||||||| ||||    
T  23676765 cataagttgtttccataagctatctcaaacaatcacaaaagtacttatacaagtagataagttcaaataagtcaat 23676840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 27623592 - 27623639
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    ||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  27623592 tataacaaaagataaaataaagtcaaactattttaatataagctataa 27623639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 31034655 - 31034690
Alignment:
Q  19 aaaagattaaataatgtcaaactgttttcatataag 54  Q
    ||||||||||||||||| ||||||||||||||||||    
T  31034655 aaaagattaaataatgttaaactgttttcatataag 31034690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 42866047 - 42866114
Alignment:
Q  35 tcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagc 102  Q
    |||||||||||| |||||||||||||  | |||||||||||||||||  |||| || | |||||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctatccttgagagcttatggaagtaagc 42866114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 46415904 - 46415837
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||||||||| |||||   |||||||||||||||| ||| |||||  | |||||||||||||||||    
T  46415904 ataacaaaagataaaataggatcaaactgttttcatacaagttataagttcttttcataagctatcct 46415837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 4691912 - 4691986
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataa 191  Q
    |||||||||||||||||| |||||   ||||||| | |||||||||| ||| ||  |||||||||||||||||||    
T  4691912 catgtcataagttgtttccataagttttctcaaatagtctcacaagtgattgtgacagtagataagctcaaataa 4691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 18630638 - 18630704
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcc 80  Q
    |||||||||||| |||||| |||||   |||||||||||||||||||  | |||||| |||||||||    
T  18630638 ataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaagctatcc 18630704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 29194512 - 29194450
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||| ||||||  ||||||| |||||||||||| |||||| ||||||| |||| ||||    
T  29194512 acaaaagataaaataaaatcaaactattttcatataagttataacttattttcttaagttatc 29194450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 30743317 - 30743375
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataacctatt 66  Q
    |||||||||||||||||| |||||| |||||||||| || || || ||||||| |||||    
T  30743317 tattttataacaaaagataaaataaagtcaaactgtctttatttacgctataaactatt 30743375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 30877221 - 30877167
Alignment:
Q  27 aaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    ||||||||||||||| |||||||||| | || ||  |||||||||||||||||||    
T  30877221 aaataatgtcaaactattttcatatatgttacaaaatattttcataagctatcct 30877167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 33534174 - 33534100
Alignment:
Q  119 atgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataag 192  Q
    |||||| || ||||||  |||||| |||||||| | ||||||||||| |||||| | ||||||||||||||||||    
T  33534174 atgtcacaatttgttttcataagctctctcaaatactctcacaagtacttatgtcactagataagctcaaataag 33534100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 44138712 - 44138762
Alignment:
Q  28 aataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    ||||| ||||| |||||||||||||||||||||  | ||||||||||||||    
T  44138712 aataaagtcaatctgttttcatataagctataaaatgttttcataagctat 44138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 49219096 - 49219162
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||| || |||||| |||||| | ||||||||||||||||||  | ||||||||| |||||    
T  49219096 tataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatc 49219162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 6364106 - 6364171
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    ||||||||||||| |||||| || ||| | | |||| ||||||||||| | |||||||||||||||    
T  6364106 tataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctat 6364171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 12816999 - 12817048
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagtatt 167  Q
    ||||||||||||||||||  ||||  || |||||||||||||||||||||    
T  12816999 catgtcataagttgtttctctaagttctttcaaacaatctcacaagtatt 12817048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 19429594 - 19429533
Alignment:
Q  20 aaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||| |||||| ||||||||||||| |||||||   ||| || |||||||||||||||||    
T  19429594 aaagataaaataaagtcaaactgtttttatataagtcgtaagctcttttcataagctatcct 19429533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 20936115 - 20936070
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctat 58  Q
    ||||||||||||| |||||| |||||||| ||||||| ||||||||    
T  20936115 tataacaaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 21953230 - 21953295
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||||||||||   |||||| |||||||| |||| ||||||||||||| | ||||| |||||||||    
T  21953230 tataacaaaagggaaaataaagtcaaactctttttatataagctataagccattttgataagctat 21953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 25717660 - 25717737
Alignment:
Q  121 gtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataaggcaat 197  Q
    ||||||||||||||| |||||| ||  |||||||| ||||||||  ||||||  ||| ||||||||||||||| ||||    
T  25717660 gtcataagttgtttccataagctcttccaaacaatttcacaagtgcttatgtcggtacataagctcaaataagacaat 25717737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 27330079 - 27330002
Alignment:
Q  120 tgtcataagttgtttcgataagcgctctcaaacaatctcacaagtattatgtaagtagataagctcaaataaggcaat 197  Q
    |||||||||||||||  ||||   ||||||||||||||||  |   ||||||||||||||||||| ||||||| ||||    
T  27330079 tgtcataagttgttttcataaatcctctcaaacaatctcattaaacttatgtaagtagataagcttaaataagccaat 27330002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 35958612 - 35958689
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||| ||| | |||||| |||||| |  ||| |||||||||| || || |||||||||||||||||| |||||||    
T  35958612 tataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcataagctatcctggagagttt 35958689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 36460544 - 36460605
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagc 75  Q
    |||||||||||| | || | | || |||||||||||||||||||||| || |||||||||||    
T  36460544 ataacaaaagataagatcaagccacactgttttcatataagctataagctgttttcataagc 36460605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 6e-18; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 281961 - 281774
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaat 111  Q
    ||||||||||||| |||||| |||||  |||||||||||||||||||| || | |||||||||||||||  |||| |  | ||| ||||| | ||||||     
T  281961 tataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaac 281862  T
Q  112 ttat-gccatgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    |||| | |||||||||||||| ||| || ||| ||| |||||| ||||||||||| |||||| | || |||| ||||| |||| ||||    
T  281861 ttatagacatgtcataagttgcttccattagctctcccaaacagtctcacaagtacttatgtcactacataatctcaagtaagtcaat 281774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 22742323 - 22742392
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    ||||||||| ||| |||||| |||||| |||||||||||||||||||| ||||||| ||||| |||||||    
T  22742323 tataacaaaggataaaataaagtcaaattgttttcatataagctataagctatttttataagttatcctg 22742392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 24782257 - 24782327
Alignment:
Q  120 tgtcataagttgtttcgataagcgctctcaaacaatctcacaagtattatgtaagtagataagctcaaataag 192  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||  ||| ||||| |||||||||||||||    
T  24782257 tgtcataagttgtttctataagctctctcaaacaatttcacaagta--atgaaagtacataagctcaaataag 24782327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 2027522 - 2027442
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| |||||| || || |||||||||| | || |||||||    
T  2027522 ttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagttt 2027442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 2460157 - 2460082
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataag 192  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||| |||||  |||  |||||||||||||||    
T  2460157 catgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataag 2460082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 1402953 - 1403019
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||||||| |||||| || ||||| ||||||||||||||||||  | |||||||||||||||    
T  1402953 tataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatc 1403019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 3155137 - 3155207
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||| ||| || |||||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||    
T  3155137 acaaaagataaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagag 3155207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 33068674 - 33068604
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataaccta-ttttcataagctatcctg 82  Q
    ||||||||||||| ||||||| |||||||||||||| ||||| ||||| ||| |||||||||||| |||||    
T  33068674 tataacaaaagataaaataatatcaaactgttttcaaataagatataagctatttttcataagctgtcctg 33068604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 22691611 - 22691558
Alignment:
Q  35 tcaaactgttttcatataagctataacctattttcataagctatcctgaagagt 88  Q
    ||||| |||||||||||||| |||||||||||||||||| |||||||| |||||    
T  22691611 tcaaattgttttcatataagttataacctattttcataacctatcctggagagt 22691558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 29274342 - 29274281
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataag 74  Q
    |||| |||||||| |||||| |||||| |||||||||||||||||||| || ||||||||||    
T  29274342 tatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataag 29274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 30523612 - 30523684
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||||||||||| ||| |||||||||||||  || ||||||||||||||||  | |||||||||||||||||    
T  30523612 tattttataacaaatgataaaataatgtcaaatcgtcttcatataagctataa-gttttttcataagctatcct 30523684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 4006671 - 4006738
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcc 80  Q
    ||||||||| ||| |||||| |||||| |||||| |||||||||||||  | ||||||||||||||||    
T  4006671 tataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatcc 4006738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 10154184 - 10154242
Alignment:
Q  19 aaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagcta 77  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| ||| ||||||| ||||    
T  10154184 aaaagataaaataaagtcaaactgttttcatataagttataagctactttcataggcta 10154242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 33259770 - 33259836
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagct 76  Q
    |||||||||||||||| || | | |||| ||||||||| |||| ||||||| |||||||||||||||    
T  33259770 ttttataacaaaagataaattgaagtcatactgttttcctatatgctataagctattttcataagct 33259836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 2206544 - 2206641
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    |||||||||||||||| |||||| ||  || |||||| ||||||||||| | || ||| ||||||||||| || ||||||| | ||| ||||| ||||    
T  2206544 ttttataacaaaagataaaataaagtataattgtttttatataagctatgaactgtttacataagctatcttggagagtttatagaattaagctgaaa 2206641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 25426136 - 25426196
Alignment:
Q  22 agattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    |||| |||||| |||||| || |||||| |||||||||| ||||||| |||||||||||||    
T  25426136 agataaaataaagtcaaattgctttcatgtaagctataagctatttttataagctatcctg 25426196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 3168359 - 3168300
Alignment:
Q  28 aataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||| ||||||| | ||||||||||||||| || ||||| |||||||||||| ||||    
T  3168359 aataatgacaaactgatctcatataagctataaactgttttcttaagctatcctggagag 3168300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 3181182 - 3181115
Alignment:
Q  12 ttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||| ||||||||| |||||| ||||||| |||||||||||| | |||| || |||||||||| ||||    
T  3181182 ttattacaaaagataaaataaagtcaaaccgttttcatataaaccataaactgttttcataagttatc 3181115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 7785855 - 7785808
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||    
T  7785855 tataccaaaagataaaataaagtcaaactcttttcatataagctataa 7785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 9093669 - 9093606
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagct 76  Q
    |||| |||||||| |||||| || ||| ||||||| |||||||||||| || ||||||||||||    
T  9093669 tatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 34939526 - 34939657
Alignment:
Q  69 cataagctatcctgaagagtttgttgaagtaagccgaaa-caatttatgc-catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-a 165  Q
    ||||||||||||||||||| || | ||| ||||| |||| ||| ||| |  | |||||||||||||||| |||||| |||||||||||| | ||||||      
T  34939526 cataagctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaacaattttacaagtcg 34939625  T
Q  166 ttatgtaagtagataagctcaaataaggcaat 197  Q
    ||| || | |||||||| ||||||||| ||||    
T  34939626 ttacgtcactagataagttcaaataagccaat 34939657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 2514659 - 2514753
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    ||||| ||||||| |||||| ||||||||  ||| |||| ||||||||  |||||||||||||| ||||| |||  || | |||||||| |||||    
T  2514659 tataataaaagataaaataaagtcaaactaattttatatgagctataagttattttcataagctgtcctggagatcttttggaagtaagacgaaa 2514753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 3169358 - 3169292
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||||||| ||||||  || ||||||||||| ||||||||||  |||||| |||||| ||||    
T  3169358 tataacaaaagatgaaataaattcgaactgttttcacataagctatacgctatttgcataagatatc 3169292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 3204655 - 3204593
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagc 75  Q
    ||||| ||||||| |||||| ||| |||||||||||||||||||| ||  | |||||||||||    
T  3204655 tataataaaagataaaataaagtcgaactgttttcatataagctagaaattgttttcataagc 3204593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 7713983 - 7714025
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagct 56  Q
    |||||||||||| |||||| |||||| ||||||||||||||||    
T  7713983 ataacaaaagataaaataaagtcaaattgttttcatataagct 7714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 10860958 - 10861000
Alignment:
Q  43 ttttcatataagctataacctattttcataagctatcctgaag 85  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||    
T  10860958 ttttcgtataatctataagctattttcataagctatcctgaag 10861000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 26491631 - 26491705
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||| |||||||| |||||| ||||  |||||||||||| || ||||  ||||| |||||||||| |||||||||    
T  26491631 tatagcaaaagataaaataaagtcatcctgttttcatatgagatatatactattatcataagctaacctgaagag 26491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 28088307 - 28088269
Alignment:
Q  41 tgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||||||||||||| || |||||||||||||||    
T  28088307 tgttttcatataagctataaactgttttcataagctatc 28088269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 32917261 - 32917307
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt 164  Q
    |||||||||||||||||| |||||| ||| |||||| ||||||||||    
T  32917261 catgtcataagttgtttccataagctctcccaaacagtctcacaagt 32917307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 33887784 - 33887858
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaa 84  Q
    |||||||||| ||||| ||| ||  ||||||||||||  ||||| | |||| || ||||||||||||||||||||    
T  33887784 ttttataacacaagataaaacaaactcaaactgttttagtataatcaataaactgttttcataagctatcctgaa 33887858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 33911397 - 33911316
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgt 92  Q
    |||||||||||||||| |||||| || ||||||  | |||||||  ||||| || ||||||||| |||||||||| |||||||    
T  33911397 ttttataacaaaagatcaaataaagttaaactg-atccatataatttataagctgttttcataaactatcctgaaaagtttgt 33911316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 3785808 - 3785739
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||| |||||| || ||||||||||| |||||||||||| || ||||  |||||||| ||| ||||    
T  3785808 caaaagataaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctattctggagag 3785739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 7149553 - 7149512
Alignment:
Q  46 tcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||||| |||||||||||| |||||||| ||||    
T  7149553 tcatataagctataaactattttcataaactatcctggagag 7149512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 18264307 - 18264360
Alignment:
Q  34 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||| |||||||||| ||| ||||| |||||||| ||| |||||||||||||    
T  18264307 gtcaaattgttttcatacaagttataagctattttcttaaactatcctgaagag 18264360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 27857423 - 27857496
Alignment:
Q  119 atgtcataagttgtttcgataagcgctctcaaacaatctcacaagtat-tatgtaagtagataagctcaaataa 191  Q
    ||||||||||||||||  |||||| ||| |||||| | |||||||| | ||||| ||||||||| |||||||||    
T  27857423 atgtcataagttgttttcataagctctcccaaacagtttcacaagtgtctatgtcagtagataaactcaaataa 27857496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 32577992 - 32577943
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagtatt 167  Q
    |||||||||||||||||  |||||| |||||||||||| || ||||||||    
T  32577992 catgtcataagttgttttcataagctctctcaaacaatgtcccaagtatt 32577943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 3e-17; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 30013170 - 30013244
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    |||||||||||||||| | |||| | |||||||||||| |||||||||||||| || ||||||||||||||||||    
T  30013170 tattttataacaaaaggtcaaattaagtcaaactgtttccatataagctataagctgttttcataagctatcctg 30013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 6509408 - 6509274
Alignment:
Q  21 aagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaatttat-gcc 118  Q
    ||||| |||||| |||||| ||| || ||||||||||||| || |||||||||||||||||| |||| || ||||| ||||  | ||| | ||||| | |    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggc 6509309  T
Q  119 atgtcataagttgtttcgataagcgctctcaaaca 153  Q
    |||||||||| |||||| |||||| ||||||||||    
T  6509308 atgtcataagctgtttctataagctctctcaaaca 6509274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 42764220 - 42764298
Alignment:
Q  10 ttttataacaaaagatt-aaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||||||| |||| |  | |||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  42764220 ttttataacaaaagatttaaatgaaattaaactgttttcatacaagctataagctattttcataagttatcctgaagag 42764298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 30191240 - 30191072
Alignment:
Q  27 aaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaatttatg-ccatgtca 124  Q
    |||||| ||||||||| |  ||||||| |||||| ||||||| |||||||||||||||  |||| | ||| ||||| | |||||| || ||  |||||||    
T  30191240 aaataaagtcaaactgctcacatataatctataagctattttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtca 30191141  T
Q  125 taagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataag 192  Q
    ||||||||||| |||||| ||| |||||| ||| ||||||  |||||  | ||||||| ||||||||||    
T  30191140 taagttgtttccataagctctcccaaacagtctaacaagtgcttatgccaatagataaactcaaataag 30191072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 3112089 - 3112164
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaag 85  Q
    ||||| || ||||||  |||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||||    
T  3112089 ttttacaataaaagagcaaataaagtcaatctgttttcataaaagctataacccattttcataagctaccctgaag 3112164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 42215410 - 42215345
Alignment:
Q  22 agattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||| |||||| |||||||||||||  ||||| |||||||||||||||||| ||||||||| ||||    
T  42215410 agataaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagag 42215345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 787217 - 787145
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||| ||||| |||||| |||||| |||| ||||||||||||||| || |||||||||| |||| |||||||    
T  787217 taacataagataaaataaagtcaaattgttatcatataagctataaactgttttcataagttatcttgaagag 787145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 34770853 - 34770917
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    ||||||||| |||||| |||||| ||||||||| ||||||||||  | |||||||||||||||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcct 34770917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 4763878 - 4763949
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||| ||||||  |||||| ||||||| ||||||||||| || ||||  |||||||||||||||||    
T  4763878 aacaaaagataaaataaattcaaaccgttttcacataagctataagctgtttttctaagctatcctgaagag 4763949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 11415126 - 11415293
Alignment:
Q  28 aataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccga-aacaatttatgc-catgtcat 125  Q
    ||||| |||||| | |||| ||||||| ||||  || |||||||||||||||||  |||||||||  || ||||| || || |  |||||  ||||| ||    
T  11415126 aataaagtcaaattatttttatataagttatacgctgttttcataagctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttat 11415225  T
Q  126 aagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataag 192  Q
    ||| |||||| |||| | |||| ||||||||||||||||| |||||| |||| |||||| ||||||||    
T  11415226 aagctgtttccataaactctctaaaacaatctcacaagtacttatgttagtaaataagcacaaataag 11415293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 12225008 - 12224938
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||| |||||| |||||||| |||||||||  | ||||| ||| |||||||||| |||||||||||    
T  12225008 acaaaagataaaataaagtcaaactattttcatatggggtataagctactttcataagccatcctgaagag 12224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 33209326 - 33209268
Alignment:
Q  20 aaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||||| |||||| ||| |||||||||||||||| |||||| ||||||| |||||||||    
T  33209326 aaagataaaataaagtcgaactgttttcatataaactataagctatttttataagctat 33209268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 42237538 - 42237488
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    |||||||||||||||| |||||| || ||| ||||||||||||||||||||    
T  42237538 ttttataacaaaagataaaataaagttaaattgttttcatataagctataa 42237488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 1470969 - 1470892
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||| ||||||| |||||| |||||| |  ||||||||||||||||| || ||||||||| ||||| |||| |||||    
T  1470969 tataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctatcatgaaaagttt 1470892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 9836970 - 9836901
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||||  ||| || ||| |||||||| |||||||||||| || ||||| |||||||||||||||    
T  9836970 ttttataacaactgataaagtaaagtcaaactattttcatataagttacaacctgttttcataagctatc 9836901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 25881419 - 25881350
Alignment:
Q  120 tgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaa 188  Q
    ||||||||||||||||  ||||| || ||||||| ||||||||||| |||||| ||||||||| ||||||    
T  25881419 tgtcataagttgtttctctaagctctttcaaacagtctcacaagtacttatgtcagtagataaactcaaa 25881350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 41208870 - 41208919
Alignment:
Q  41 tgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||||||||||||||||| | |||||| | |||||||||||||||||    
T  41208870 tgttttcatataagctataacttgttttcacatgctatcctgaagagttt 41208919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 41336761 - 41336692
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||| ||||||||| |||||  |||||| ||||||||||||| ||| ||| | |||||||||||||||    
T  41336761 ttttatgacaaaagataaaatatagtcaaattgttttcatataaactagaacttgttttcataagctatc 41336692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 10075643 - 10075596
Alignment:
Q  34 gtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||||| |||| ||||||| ||||| ||||||||||||||||||||    
T  10075643 gtcaaactatttttatataagttataagctattttcataagctatcct 10075596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 29973052 - 29973115
Alignment:
Q  27 aaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    |||||| |||||||| |||||| |||||||||||  | |||||||||||||||||  |||||||    
T  29973052 aaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagttt 29973115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 34080377 - 34080310
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    ||||||||||| |||| | |||||||||||  | |||||||||||| || |||||||| |||||||||    
T  34080377 taacaaaagataaaatgaagtcaaactgttaccgtataagctataagctgttttcatacgctatcctg 34080310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 41309772 - 41309819
Alignment:
Q  43 ttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||||||| ||||||  |||||||||||||||||||||| |||||    
T  41309772 ttttcatataaactataagatattttcataagctatcctgaaaagttt 41309819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 12361156 - 12361210
Alignment:
Q  20 aaagattaaataatgtcaaactgttttcatataagctataacctattttcataag 74  Q
    |||||| |||| | |||||| |||||||||||||||||||| || ||||||||||    
T  12361156 aaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataag 12361210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 13561425 - 13561359
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||| || ||||||||| |||||| |||||||||||||  |||||| | |||||| ||||||||    
T  13561425 tataacagaaaattaaataaagtcaaattgttttcatataaattataacttgttttcacaagctatc 13561359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 28769452 - 28769358
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    |||||||||  || |||| | |||||||| ||||| |||||||||||| || ||||||||||||||  || ||||||| | ||| ||||| ||||    
T  28769452 tataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaa 28769358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 34788543 - 34788493
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    |||||| || |||||| |||||| |||||||||||| ||||||||||||||    
T  34788543 ttttatgaccaaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 4510988 - 4511053
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||||||||||| || |||||| | || ||||||||| ||||| || ||||||||||| |||||    
T  4510988 aacaaaagattaaaaaaagtcaaatttttctcatataagttataagctgttttcataagcgatcct 4511053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 11188268 - 11188191
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||||||||| ||||||   |||||| |||| |||| || ||||| ||||||| ||||||||||||  |||||||    
T  11188268 tataacaaaagataaaataaaaccaaactatttttatattagttataaactattttgataagctatcctagagagttt 11188191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 13410311 - 13410262
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctata 59  Q
    ||||| |||||||| | ||||||||| ||||| |||||||||||||||||    
T  13410311 ttttacaacaaaagttaaaataatgttaaactattttcatataagctata 13410262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 31884579 - 31884628
Alignment:
Q  41 tgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||||||||||||||||  | ||||||||||||||| || |||||||    
T  31884579 tgttttcatataagctataaattgttttcataagctatcatggagagttt 31884628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 43569118 - 43569186
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    ||||| ||||||| || ||| |||||| ||||||| |||||||||||| | |||| ||||||||||||||    
T  43569118 tataataaaagataaattaa-gtcaaaatgttttcctataagctataaaccatttccataagctatcctg 43569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 44865673 - 44865612
Alignment:
Q  18 caaaagattaaataatgtca-aactgttttcatataagctataacctattttcataagctat 78  Q
    |||||||||||||||||||| |||  |||||||||||||||||| ||  ||| |||||||||    
T  44865673 caaaagattaaataatgtcagaacgattttcatataagctataagctggttttataagctat 44865612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 1e-16; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 17989139 - 17989062
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||||| || |||||| |||||||||||||||||||| ||||||  | |||||||||||| ||||||||||    
T  17989139 ttttataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagag 17989062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 5006622 - 5006546
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtt 89  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||  | ||||||||||||| |||| ||||||    
T  5006622 tataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagctaccctggagagtt 5006546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 4966116 - 4966268
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaattta 114  Q
    |||||| ||| ||||||| |||||| |||||||||| || ||||| || ||||||||||| ||||||||||| || | ||| ||| | | |||||| |||    
T  4966116 aacaaaggataaaataatatcaaacagttttcatattaggtataagctgttttcataagccatcctgaagagcttatggaaataaactgaaaacaactta 4966215  T
Q  115 t-gccatgtcataagttgtttcgataagcgctctcaaacaatctcacaagtat 166  Q
    | | ||| |||||||| ||||| |||||| |||  ||||| ||||||||||||    
T  4966216 tggacatatcataagtggtttctataagctctcctaaacagtctcacaagtat 4966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 7623092 - 7623172
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    |||||||||||||| | |||||| ||| |||| |||| ||||||||| ||| |||||||||||| ||||| ||||||||||    
T  7623092 ttttataacaaaaggtaaaataaagtccaactctttttatataagctgtaagctattttcataaactatcttgaagagttt 7623172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 28340960 - 28340889
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||||| ||||||| |||| | |||||| |||| ||||||||||||||| || |||||||||||||||||    
T  28340960 ttttataataaaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataagctatcct 28340889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 197
Target Start/End: Complemental strand, 44151592 - 44151402
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaatt 112  Q
    ||||||||||||  ||||| || ||||||||| ||||||||||||||  | ||||||||| ||||| |||| || || | ||| ||||| | |||||  |    
T  44151592 ataacaaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatct 44151493  T
Q  113 tat-gccatgtcat----aagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    ||| | ||||||||    || ||||||  |||||| |||||||| ||||||||||||| |||||| |||| ||||| ||||||||| ||||    
T  44151492 tatggacatgtcataaaaaaattgttttcataagctctctcaaataatctcacaagtacttatgtcagtatataagttcaaataagtcaat 44151402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 1417221 - 1417285
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagcta 77  Q
    ||||||||||||| |||||| |||||| ||||||||||||||| ||||  | |||||||||||||    
T  1417221 tataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 3019847 - 3019927
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    |||| ||||||||||||| |||||| |||| |||||| |||||||||| ||||   |||||||||||||||||||| ||||    
T  3019847 catgccataagttgtttccataagcactcttaaacaagctcacaagtacttatactagtagataagctcaaataagtcaat 3019927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 5369789 - 5369737
Alignment:
Q  28 aataatgtcaaactgttttcatataagctataacctattttcataagctatcc 80  Q
    ||||| ||||||||||||||||||| ||||||| || ||||||||||||||||    
T  5369789 aataaagtcaaactgttttcatatatgctataagctgttttcataagctatcc 5369737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 36598362 - 36598286
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataagg 193  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||| |  |||||| ||||| |||| ||||||||||    
T  36598362 catgtcataagatgtttccataagctctctcaaacaatctcacaattgcttatgtcagtagttaagttcaaataagg 36598286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 39551661 - 39551601
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataa 73  Q
    |||||||||||||  | ||| || |||||||||||||||||||||||| ||||||||||||    
T  39551661 tataacaaaagatatactaaagtaaaactgttttcatataagctataatctattttcataa 39551601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 9527203 - 9527140
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagct 76  Q
    |||||||||||||  ||||| |||||||||||||||||||| ||||||  | ||||||||||||    
T  9527203 tataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 33894580 - 33894766
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctatttt-----cataagctatcctgaagagtttgttgaagtaagccg-aa 106  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| ||   | ||||     | |||||||||||| | ||||| ||||| ||||| | ||    
T  33894580 tataacaaaagataaaataa-gtcaaactgttttcatataagctttatgttgtttttacaacttaagctatcctggaaagtttattgaaataagctgaaa 33894678  T
Q  107 acaatttat-gccatgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataag 192  Q
    |||| |||| | ||||||||| | |||||  |||||| ||| |||||| ||||||||||  |||||| | | ||||||||||||||||    
T  33894679 acaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttatgtcatttgataagctcaaataag 33894766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 38010668 - 38010739
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    ||||| |||||||||| ||| || | |||| |||||||||||||||||||| || ||||||||| |||||||    
T  38010668 ttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcct 38010739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 21453253 - 21453319
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    ||||||||||| | |||| |||||  |||| ||||||||||||||| || |||||||||||||||||    
T  21453253 taacaaaagataagataaagtcaagttgttctcatataagctataaactgttttcataagctatcct 21453319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 27481407 - 27481341
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||| ||| |||  | |||||||||||| ||||||||||||||  |||||||||||||||||    
T  27481407 tataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctatc 27481341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 36537972 - 36538018
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt 164  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||    
T  36537972 catgtcataagttgtttccataagttctctcaaacaatctcacaagt 36538018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 46825055 - 46825121
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||| ||||||| |||||| |||||| ||||||||||||||| |||| |  |||||||||||||||    
T  46825055 tataaaaaaagataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatc 46825121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 12110325 - 12110390
Alignment:
Q  21 aagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    ||||| |||||| |||||| ||||||  |||||||||||| || ||||||||||||||| ||||||    
T  12110325 aagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaaga 12110390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 27548225 - 27548286
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||| |||||| ||| || ||||||||| |||||||||| || |||||||||||||||    
T  27548225 caaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatc 27548286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 40689099 - 40689030
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    |||| |||||||| |||||| || ||| | |||||||||||||||||| || | ||||||||||||||||    
T  40689099 tatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctg 40689030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 23434272 - 23434204
Alignment:
Q  13 tataacaaaagattaaataatgtcaaac-tgttttcatataagctataacctattttcataagctatcc 80  Q
    ||||||||||||| ||||||  |||||  |||||||| ||||||||| | |||||||||||||||||||    
T  23434272 tataacaaaagataaaataaaatcaaaagtgttttcaaataagctattagctattttcataagctatcc 23434204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 23918918 - 23918986
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaag 85  Q
    ||||||||| |||||| |||||| |||||||||||||||||||| || |  |||||| |||| ||||||    
T  23918918 acaaaagataaaataaagtcaaattgttttcatataagctataatctgtaatcataaactattctgaag 23918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 29363473 - 29363549
Alignment:
Q  11 tttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||| |||| ||||| |||||| |||||||||||||||||| || ||||| || || ||||||| ||||||| ||||    
T  29363473 tttacaacagaagataaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagag 29363549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 34441048 - 34441120
Alignment:
Q  15 taacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||| ||| |||||| || ||| ||||| |||||||||| ||| |||||||||||||||||  |||||||    
T  34441048 taacaaacgataaaataaagttaaattgtttgcatataagctgtaaactattttcataagctattttgaagag 34441120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 45777289 - 45777237
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    |||| ||||||||||||| |||| | |||||||||||||||||||| ||||||    
T  45777289 tattatataacaaaagataaaattaagtcaaactgttttcatataaactataa 45777237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 2012722 - 2012683
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagcta 57  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  2012722 caaaatattaaataatgtcaaattgttttcatataagcta 2012683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 2030671 - 2030710
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagcta 57  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  2030671 caaaatattaaataatgtcaaattgttttcatataagcta 2030710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 8427084 - 8427151
Alignment:
Q  125 taagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataa 191  Q
    ||||||||||| ||| || | | |||||| ||||||||||| |||||| |||||||||||||||||||    
T  8427084 taagttgtttccataggctcccccaaacagtctcacaagtacttatgttagtagataagctcaaataa 8427151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 22759143 - 22759210
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcc 80  Q
    ||||||||||||| |||||| |  ||| ||||||||||||||||| || ||  |||||||||||||||    
T  22759143 tataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctatcc 22759210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 31002722 - 31002781
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagct 76  Q
    ||||||||| |||||| |||||| | |||||||||||||||||| || |||| |||||||    
T  31002722 acaaaagataaaataaagtcaaaatattttcatataagctataagctgttttgataagct 31002781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 47427308 - 47427265
Alignment:
Q  119 atgtcataagttgtttcgataagcgctctcaaacaatctcacaa 162  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||    
T  47427308 atgtcataagttgtttccataagctctctcaaaccatctcacaa 47427265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 2048150 - 2048088
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||| || ||| ||||||||| ||||| ||||||||||| || ||| |||||||||||    
T  2048150 acaaaagataaattaaagtcaaactgatttcagataagctataagctttttacataagctatc 2048088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 28165048 - 28165114
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||||||| |||| | |||||| |||||| ||||||||||||| || | || ||||||||||    
T  28165048 tataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatc 28165114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 992027 - 992092
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||||||||| || |||||| | |||| | |||||||||||| ||||| || ||||||||||||||    
T  992027 tataacaaaaaataaaataaagacaaaatattttcatataaggtataaacttttttcataagctat 992092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 1350334 - 1350281
Alignment:
Q  34 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||| |||||| |||| |||||| || ||||||||| |||||||||||||    
T  1350334 gtcaaacttttttcacataatctataagctgttttcataaactatcctgaagag 1350281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 27626129 - 27626084
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaag 163  Q
    ||||||||||| |||||| ||||||  |||||||||||||||||||    
T  27626129 catgtcataagctgtttccataagctttctcaaacaatctcacaag 27626084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 35536064 - 35536117
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctatt 66  Q
    ||||||| ||||| |||||| |||||| |||||||||||||| ||||| |||||    
T  35536064 tataacataagataaaataaagtcaaattgttttcatataagttataagctatt 35536117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 39505919 - 39506007
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    ||||||||||||||  ||||||||| ||||||||||||  |||  | |||||||||||||| ||| ||||||| | ||| ||||| ||||    
T  39505919 caaaagattaaatagagtcaaactg-tttcatataagcattaagttgttttcataagctattctggagagtttatggaaataagctgaaa 39506007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 39591580 - 39591539
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataag 54  Q
    ||||||||||||| |||||| |||||| ||||||||||||||    
T  39591580 tataacaaaagataaaataaagtcaaattgttttcatataag 39591539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 40734798 - 40734749
Alignment:
Q  144 ctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataag 192  Q
    |||||||||||||||||||||| |||| | ||||||||||||||| ||||    
T  40734798 ctctcaaacaatctcacaagtatttatattagtagataagctcaagtaag 40734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 46104391 - 46104342
Alignment:
Q  37 aaactgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    ||||||||||| |||||||||||| || |||||||||| |||| ||||||    
T  46104391 aaactgttttcgtataagctataaactgttttcataagttatcttgaaga 46104342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 4e-16; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 25183104 - 25182947
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaaca 109  Q
    ||||||||||||||||||||||| || || || ||||||||| |||||||| || ||||||||||||||| || | | ||||| ||| || || |||| |    
T  25183104 ttttataacaaaagattaaataaagttaagctattttcatatgagctataagctgttttcataagctatcatggaaaatttgtggaaatatgctgaaa-a 25183006  T
Q  110 at---ttat-gccatgtcataagttgtttcgataagcgctctcaaacaatctcacaagt 164  Q
    ||   |||| |  ||||||||||||||||  |||||| |||||||||| ||||||||||    
T  25183005 atagcttatggatatgtcataagttgttttcataagctctctcaaacagtctcacaagt 25182947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 24887396 - 24887273
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaat 111  Q
    |||||||| |||| |||||| |||||||||| ||||||||||||| || || |||||||||||||||||| |||| || | | | ||||| | ||||| |    
T  24887396 tataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaacagt 24887297  T
Q  112 ttatgccatgtcataagttgtttc 135  Q
    | ||| |||||||||| |||||||    
T  24887296 taatgacatgtcataaattgtttc 24887273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 38462238 - 38462305
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcc 80  Q
    |||| |||||||| |||||| ||||||||||||||||||| ||||||| || ||||||||||||||||    
T  38462238 tataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatcc 38462305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 20502176 - 20502107
Alignment:
Q  19 aaaagattaaataatgtcaaa-ctgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||| |||||| |||||| ||||||||||||| ||||||| || |||||||||||||||||||||||    
T  20502176 aaaagatcaaataaagtcaaaactgttttcatatacgctataagctgttttcataagctatcctgaagag 20502107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 25453963 - 25453903
Alignment:
Q  22 agattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 82  Q
    |||| |||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  25453963 agataaaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctg 25453903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 33965607 - 33965528
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatat--aagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||||||| | |||||| ||||||||||||||||||  |||||||||  | ||||||||||||||| |||||||    
T  33965607 ttttataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagag 33965528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 37689500 - 37689432
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||||||||||||||| || ||| || ||| | |||||||||||||||||| |||||||||||||||||    
T  37689500 ttttataacaaaagataaagtaaagttaaattattttcatataagctataaactattttcataagctat 37689432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 22232783 - 22232849
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||| ||| |||||| |||||||||||||||||||||   ||| ||||||||||||||||||    
T  22232783 tataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatc 22232849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 197
Target Start/End: Original strand, 41452494 - 41452667
Alignment:
Q  27 aaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaatttat-gccatgtca 124  Q
    |||||| |||||||||||||||||| || | ||| || |||||||||||||||||| |||  |||| ||| ||||  | |||||  |||| | ||| |||    
T  41452494 aaataaagtcaaactgttttcatattagttgtaagctgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatca 41452593  T
Q  125 taagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    ||||||||||| |||||  |||||||| | ||||||||||| |||||| || | |||  |||||||||| ||||    
T  41452594 taagttgtttctataaggtctctcaaatactctcacaagtacttatgtgagcatatagactcaaataagtcaat 41452667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 49587029 - 49586984
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctat 58  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||    
T  49587029 tataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 52618963 - 52619039
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgt 92  Q
    |||||| |||||||||| || ||| |||||||||||||| ||||| || |||||| |||||||| ||||||| ||||    
T  52618963 aacaaatgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgt 52619039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 2201092 - 2201151
Alignment:
Q  20 aaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||| ||| || ||||||||||||||||||||||||||| || ||||||| |||||||    
T  2201092 aaagataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatc 2201151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 40122864 - 40122798
Alignment:
Q  14 ataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||||  | |||| ||||||||||||    
T  40122864 ataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctatcct 40122798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 1816537 - 1816614
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||| ||||||| |||||| |||||||||||||  |||||| |||||  | |||||||||||||| ||| ||||    
T  1816537 ttttataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagag 1816614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 14145866 - 14145935
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    |||||||||| ||||| |||||| || ||| ||||||| |||| |||||||  |||||||||||||||||    
T  14145866 ttttataacagaagataaaataaagttaaattgttttcgtatatgctataagttattttcataagctatc 14145935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 24158515 - 24158442
Alignment:
Q  125 taagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    ||||||||||| |||||| ||| |||||| | ||||||||| |||||| |||||||||||| ||||||| ||||    
T  24158515 taagttgtttccataagctctcgcaaacagtttcacaagtacttatgtcagtagataagcttaaataagccaat 24158442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 33405252 - 33405207
Alignment:
Q  41 tgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||    
T  33405252 tgttttcatataagctataagctgttttcataagctatcttgaaga 33405207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 36646491 - 36646418
Alignment:
Q  17 acaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagttt 90  Q
    ||||||||| |||||| ||  || |||||||||||||| |||||| | |||||||||||||||||  |||||||    
T  36646491 acaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagttt 36646418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 53736226 - 53736185
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataag 54  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  53736226 tataacaaaagataaaataatgtcaaactattttcatataag 53736185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 1395628 - 1395688
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataa 73  Q
    ||||||||||||| |||||| |||||| | |||||||||||||||| | || |||||||||    
T  1395628 tataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcataa 1395688  T

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Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 22667479 - 22667547
Alignment:
Q  130 tgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    |||||| |||| | |||||||||| ||||||||||  |||||| |||||||||||||||||||| ||||    
T  22667479 tgtttccataaactctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataagccaat 22667547  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 22724118 - 22724186
Alignment:
Q  130 tgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggcaat 197  Q
    |||||| |||| | |||||||||| ||||||||||  |||||| |||||||||||||||||||| ||||    
T  22724118 tgtttccataaactctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataagccaat 22724186  T

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Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 52440778 - 52440702
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaaga 86  Q
    ||||||||||||| || |||| |  ||||| |||||||| ||||||||||| ||||||||||||  |||| ||||||    
T  52440778 ttttataacaaaatataaaatcaaatcaaattgttttcaaataagctataagctattttcataatttatcttgaaga 52440702  T

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Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 2321242 - 2321289
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagta 165  Q
    ||||| |||||||||||| |||| | ||||||||||||||||||||||    
T  2321242 catgtaataagttgtttccataaactctctcaaacaatctcacaagta 2321289  T

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Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 8007808 - 8007761
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    ||||||||||||| || ||| ||||||||||| |||||||||||||||    
T  8007808 tataacaaaagataaagtaaagtcaaactgttatcatataagctataa 8007761  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 20192719 - 20192672
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    ||||||||||||| |||||| ||||||| |||||||||||| ||||||    
T  20192719 tataacaaaagataaaataaagtcaaacagttttcatataatctataa 20192672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 23785220 - 23785275
Alignment:
Q  21 aagattaaataatgtcaaactgttttcatataagctataacctattttcataagct 76  Q
    ||||| |||||| |||||||||| |||||||||||||||| || |||||| |||||    
T  23785220 aagataaaataaagtcaaactgtattcatataagctataaactgttttcacaagct 23785275  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 23793540 - 23793587
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagc 55  Q
    |||||||||||||||||| |||||| |||||| || ||||||||||||    
T  23793540 tattttataacaaaagataaaataaagtcaaaatgatttcatataagc 23793587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 42038946 - 42038993
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    |||||||||||||  ||||| ||||||| |||||||||||||||||||    
T  42038946 tataacaaaagatctaataaagtcaaaccgttttcatataagctataa 42038993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 1217916 - 1217845
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcct 81  Q
    |||||||||||||||||  |||| | || ||| ||||||||| |||| ||||| || |||||||||||||||||    
T  1217916 tattttataacaaaaga--aaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatcct 1217845  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 2863795 - 2863833
Alignment:
Q  37 aaactgttttcatataagctataacctattttcataagc 75  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  2863795 aaactgttttcctataagctataagctattttcataagc 2863833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 22343589 - 22343639
Alignment:
Q  37 aaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    |||||||||||||||||| ||||| || ||| |||||||||| ||||||||    
T  22343589 aaactgttttcatataagttataagctgtttccataagctatactgaagag 22343639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 28306115 - 28306189
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 87  Q
    ||||||||||  | |||||| ||||||||||||||||||||| || ||  | |||||||||||||| | ||||||    
T  28306115 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagag 28306189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 28779310 - 28779360
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataa 60  Q
    ||||||||||  |||| |||||| |||||||| ||||||||||||||||||    
T  28779310 ttttataacatcagatgaaataaagtcaaactattttcatataagctataa 28779360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 33306814 - 33306776
Alignment:
Q  35 tcaaactgttttcatataagctataacctattttcataa 73  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  33306814 tcaaattgttttcatataagctataagctattttcataa 33306776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 37788812 - 37788882
Alignment:
Q  8 tattttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||||||||||||||||| |||||| ||| || | ||||| ||||| ||||||  | ||||||||||||||    
T  37788812 tattttataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataagctat 37788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 49605857 - 49605783
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataa 191  Q
    |||||||||||||||||| || | | |||||||||| ||||||||||| |||||  || |||||| |||||||||    
T  49605857 catgtcataagttgtttccatgaactctctcaaacactctcacaagtacttatgctagaagataaactcaaataa 49605783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 1810041 - 1810102
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtaga 178  Q
    ||||||||||||||||||  ||||| |||||||| | |||||||||| ||||||| ||||||    
T  1810041 catgtcataagttgtttccgtaagctctctcaaatagtctcacaagtgattatgttagtaga 1810102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 24235796 - 24235731
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    ||||||||||||| | |||| |||||||| |||  |||||||||||||  | ||||||||||||||    
T  24235796 tataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttcataagctat 24235731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 31337511 - 31337450
Alignment:
Q  16 aacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagcta 77  Q
    |||||||||| |||||| ||||||||||||| ||||||| |||||  | | |||||||||||    
T  31337511 aacaaaagataaaataaagtcaaactgtttttatataagttataagttgtattcataagcta 31337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 34254917 - 34254856
Alignment:
Q  18 caaaagattaaataatgtcaaactgttttc-atataagctataacctattttcataagctat 78  Q
    |||| ||| |||||| |||||||||||||  |||| |||||||| |||||||||||||||||    
T  34254917 caaatgataaaataaagtcaaactgttttttatattagctataaactattttcataagctat 34254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 36783447 - 36783382
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctat 78  Q
    |||| |||||||| |||||| || ||| ||||||||||||| |||| | || ||||||||||||||    
T  36783447 tataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctat 36783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 43875626 - 43875671
Alignment:
Q  34 gtcaaactgttttcatataagctataacctattttcataagctatc 79  Q
    ||||||||||| |||||||||||||||  | |||||||||||||||    
T  43875626 gtcaaactgttctcatataagctataagttgttttcataagctatc 43875671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 51278270 - 51278229
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataag 54  Q
    |||||||||| ||||||||| |||||||||||||||| ||||    
T  51278270 tataacaaaatattaaataaagtcaaactgttttcatttaag 51278229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 53735978 - 53735937
Alignment:
Q  118 catgtcataagttgtttcgataagcgctctcaaacaatctca 159  Q
    |||||||||||||||||| |||||  ||||||||||||||||    
T  53735978 catgtcataagttgtttcaataagttctctcaaacaatctca 53735937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 195
Target Start/End: Original strand, 27533 - 27718
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccg-aaacaat 111  Q
    ||||||| ||||| |||||| |||||| ||||||||||||| ||||||  | ||||||||| ||||| ||   ||  ||| ||| ||||| | ||||||     
T  27533 tataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttggtaagcgtgtggaaataagctgaaaacaac 27632  T
Q  112 ttat-gccatgtcataagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataaggca 195  Q
    |||| ||||||||||||| | |||| |||||| ||| |||||| ||||| |||||  ||||| ||||||| |||||||| ||||||    
T  27633 ttatagccatgtcataagctatttccataagctctcccaaacagtctcagaagtacatatgtcagtagatcagctcaaacaaggca 27718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 3858 - 3924
Alignment:
Q  10 ttttataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagct 76  Q
    |||||||||||||||| || | | |||| ||||||||| |||| ||||||| |||||||||||||||    
T  3858 ttttataacaaaagataaactgaagtcatactgttttcctatatgctataagctattttcataagct 3924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 9777 - 9710
Alignment:
Q  125 taagttgtttcgataagcgctctcaaacaatctcacaagta-ttatgtaagtagataagctcaaataa 191  Q
    ||||||||||| ||| || ||| |||||| ||||||||||| |||||| ||||||||| |||||||||    
T  9777 taagttgtttccataggctctcccaaacagtctcacaagtatttatgttagtagataaactcaaataa 9710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 4224 - 4154
Alignment:
Q  123 cataagttgtttcgataagcgctctcaaacaatctcacaagt-attatgtaagtagataagctcaaataag 192  Q
    ||||||||||||| |||| | ||| ||||||| |||||||||  |||||| |||||| |||||||||||||    
T  4224 cataagttgtttccataaactctcacaaacaagctcacaagtgcttatgtcagtagacaagctcaaataag 4154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 160085 - 159992
Alignment:
Q  13 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 107  Q
    |||| |||||||| |||||| |||||||||  | |||||||| |||||  | ||||||||||||||||| ||||| |||| ||| ||||| ||||    
T  160085 tatagcaaaagataaaataaagtcaaactgaat-catataagttataagatgttttcataagctatcctaaagagcttgtggaaataagctgaaa 159992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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