View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4627_high_13 (Length: 357)
Name: NF4627_high_13
Description: NF4627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4627_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 5 - 340
Target Start/End: Complemental strand, 37154491 - 37154168
Alignment:
| Q |
5 |
tctccaagaatatctacaacaacaccatcttcttctacttctcaattttcttccannnnnnnnnnnnnnnnncctaatacaaccactttttcacaactaa |
104 |
Q |
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| T |
37154491 |
tctccaacaatatctacaacaacaccatcttcttctacctctcaattttcttccattttttcatatttttttcctaatacaaccactttttcacaactaa |
37154392 |
T |
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| Q |
105 |
ataataccactgatcttgttcatccttttgatccatttcaaaataacacttctattactagatctaccaatgcaacttctcaatctcataatccaaatac |
204 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |
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| T |
37154391 |
ataataccaccgatcttgttcatccttttgatccatttcaaaataacacttctattactagatctaccaatgtaacttctcaatctcataatccaaacac |
37154292 |
T |
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| Q |
205 |
aagtgaaaaaactatcaacagtaacataaccactgttaaaaattcatcacatgatgcagttcctgttcctgttcctgttcaaactccaattccaagcaaa |
304 |
Q |
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|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| |||||||||||| |
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| T |
37154291 |
aagtgaaaaaactatcaatagtaacataaccactgtacaaaattcatcacatgatgcagttcct------------gttcaatctccgattccaagcaaa |
37154204 |
T |
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| Q |
305 |
aacaatacttcaatcaccaaacccacttcacagatt |
340 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
37154203 |
aacaatacttcaatcaccaaacccacttcacagatt |
37154168 |
T |
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