View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4627_high_31 (Length: 238)
Name: NF4627_high_31
Description: NF4627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4627_high_31 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 9e-91; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 32557897 - 32558069
Alignment:
| Q |
1 |
tgaatccatggaaaatagggccttgtccattacggcaagggcctcggaccaaaataggcttattttaatgatatcaatatcatgtaaagtacaaaacatc |
100 |
Q |
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| T |
32557897 |
tgaatccatggaaaatagggcctggtccattacggcaagggcctcggaccaaaataggcttattttaatgatatcaatatcatgtaaagtacaaaacatc |
32557996 |
T |
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| Q |
101 |
aataaggttaaaaatatatggctactgagaaaaaacgagaaaatttaaagtttcagattaagtttcagattaa |
173 |
Q |
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| T |
32557997 |
aataaggttaaaaatatatggctactgagaaaaaacgagaaaatttaaagtttcagattaagtttcagattaa |
32558069 |
T |
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Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 32558051 - 32558093
Alignment:
| Q |
180 |
agattaagtttcagatcaattcgaagacaaaaataggatttca |
222 |
Q |
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| T |
32558051 |
agattaagtttcagattaattcgaagacaaaaataggatttca |
32558093 |
T |
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