View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4627_high_32 (Length: 227)
Name: NF4627_high_32
Description: NF4627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4627_high_32 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 37492861 - 37492641
Alignment:
| Q |
7 |
cttttcaggttgctgctccaaatgctgaccgtggccggaactgctttcagttttaggcaaagaactagtgctaggtgattcccaagcagcatttgatgaa |
106 |
Q |
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| T |
37492861 |
cttttcaggttgctgttccaaatgctgaccgcggccggaactgctttcagttttaggcaaagaactagtgctaggtgattcccaagcagcatttgatgaa |
37492762 |
T |
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| Q |
107 |
tttgcatcaaccacatgtggccaaatcttagataactctgccaaagaaggacaaccagcgtagaaagtgagtagcacatgtttatgtcccaatacaaaac |
206 |
Q |
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| T |
37492761 |
tttgcatcaaccaaatgtggccaaatcttagataactctgccaaagagggacaaccagtgtagaaagtgagtagcacatgtttatgtcccaatacaaaac |
37492662 |
T |
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| Q |
207 |
agtcatttgtattccaatcac |
227 |
Q |
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||||||||||||||||||||| |
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| T |
37492661 |
agtcatttgtattccaatcac |
37492641 |
T |
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