View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4627_high_5 (Length: 447)
Name: NF4627_high_5
Description: NF4627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4627_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 390; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 1 - 433
Target Start/End: Original strand, 37510499 - 37510932
Alignment:
| Q |
1 |
tcaaatcaatggaaaaaacacggtctatgttcctatccaacatttgatatacatcaatacttctcggttgcattatataattggggaagtcgcaatctta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37510499 |
tcaaatcaatggaaaaaacacggtctatgttcctatccaacatttgatatacatcaatacttctcggttgcattatataattggggaagtcgcaatctta |
37510598 |
T |
|
| Q |
101 |
gagatgatcttggacgctatggtattaggcctctagcatatacccttgaagcaatagaaaaaagtgttggctttacacctcaacttatttgcagcaatga |
200 |
Q |
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| T |
37510599 |
cagatgatcttggacgctatggtattaggcctctagcatatacccttgaagcaatagaaaaaagtgttggctttacacctcaacttatttgcagcaatga |
37510698 |
T |
|
| Q |
201 |
aactacattttggacttccgaattgctagaaatccgtctttgtcacgagagaaatggaatcgacctcaaaaattgtacacgacaacatggttgtccgtca |
300 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37510699 |
aactacattttggacttctgaattgctagaaatccgtctttgtcacgagagaaatggaatcgacctcaaaaattgtacacgacaacatggttgtccgtca |
37510798 |
T |
|
| Q |
301 |
aatttttattagttgccataacgaggagctgg-nnnnnnnnttccataggtcggcattttttgaaggaaataaaatttagtttttggttgatatattgat |
399 |
Q |
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|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37510799 |
aatttttattggttgccataacgaggagctggaaaaaaaaattccataggtcggcattttttgaaggaaataaaatttagtttttggttgatatattgat |
37510898 |
T |
|
| Q |
400 |
tagtaaaagtaaaataaaactctaacattcggtt |
433 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
37510899 |
tagtaaaagtaaaataaaactctaacattcggtt |
37510932 |
T |
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