View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4628-Insertion-14 (Length: 347)
Name: NF4628-Insertion-14
Description: NF4628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4628-Insertion-14 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 8 - 347
Target Start/End: Original strand, 26245290 - 26245629
Alignment:
| Q |
8 |
agacggagatccatcggaaactgggacgctttgtggtggggcattttaggcgatgagacgaggagtggagaagtaccatttgacatccttaccaacactt |
107 |
Q |
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| T |
26245290 |
agacggagatccatcggaaactgggacgctttgtggtggggcattttaggcgatgagacgaggagtggagaagtaccatttgacatccttaccaacactt |
26245389 |
T |
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| Q |
108 |
catactctagcacttaagtgggacccactattataagaactgttcaaattttatcttacccagccacaaaatttagctaaatttctggagtcagtacctg |
207 |
Q |
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| T |
26245390 |
catactctagcacttaagtgggacccactattataagaactgtccaaattttatcttacccagccacaaaatttagctaaatttctggagtcagtacctg |
26245489 |
T |
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| Q |
208 |
acattttctctaccttagtgataaatattgggaaaaatgaacctttgcaacaattgtatggcgtcagtgttggtggatcccataagtgccatttgacctt |
307 |
Q |
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| T |
26245490 |
acattttctctaccttagtgataaatattgggaaaaatgaacctttgcaacaattgtatggtgtcagtgttggtggatcccataagtgccatttgacctt |
26245589 |
T |
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| Q |
308 |
ctaagcaaactttgaatcatatggtagtttgatttgcatg |
347 |
Q |
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| T |
26245590 |
ctaagcaaactttgaatcatatggtagtttgatttgcatg |
26245629 |
T |
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