View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4628-Insertion-16 (Length: 234)
Name: NF4628-Insertion-16
Description: NF4628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4628-Insertion-16 |
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| [»] chr6 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 8926657 - 8926699
Alignment:
| Q |
192 |
gaattagaataattaattttcccatacataaatctccaggtga |
234 |
Q |
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| T |
8926657 |
gaattagaataattaattttcccatacataaatctgcaggtga |
8926699 |
T |
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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 8936914 - 8936956
Alignment:
| Q |
192 |
gaattagaataattaattttcccatacataaatctccaggtga |
234 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
8936914 |
gaattagaataattaattttcccatacataaatctgcaggtga |
8936956 |
T |
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