View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4628_low_3 (Length: 253)
Name: NF4628_low_3
Description: NF4628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4628_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 1914128 - 1913894
Alignment:
| Q |
1 |
atgttgccgattaacttcccgaaaattccctggaaaagaaagtgttatcaataaacacatatataacatgtgtcagaactcgttaaccatccactcaaca |
100 |
Q |
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| T |
1914128 |
atgttaccgattaacttcccgaaaattccctggaaaagaaagtgttatcaataaacacatatataacatgtgtcagaactcgttaaccatccactcaaca |
1914029 |
T |
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| Q |
101 |
cagttaaccacatttttgaatatcgttgacctcaatttctacgcgtatatttgaactcaaatcgtgtggttaatgaatatcatatatattggagcacgat |
200 |
Q |
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| T |
1914028 |
cagttaaccacaattttgaatatcgttgaccacaatttctaagcgtatatttgaactcaaattgtgtggttaatgaatatcatatatattggagcacgat |
1913929 |
T |
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| Q |
201 |
tcggatggttaatggataaatacgtgtgtgaaagt |
235 |
Q |
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| T |
1913928 |
tcggatggttaatggataaatacgtgtgtgaaagt |
1913894 |
T |
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