View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4630-Insertion-15 (Length: 548)
Name: NF4630-Insertion-15
Description: NF4630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4630-Insertion-15 |
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Alignment Details
Target: chr3 (Bit Score: 461; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 8 - 525
Target Start/End: Complemental strand, 53414992 - 53414473
Alignment:
| Q |
8 |
tctttgtcataatgcatctcaataaatcttcatgaaacccacacaccacactattctcaccatactttttaggatataccctactctatcacccttgcca |
107 |
Q |
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| T |
53414992 |
tctttgtcaaaatgcatctcaataaatcttcacgaaacccacacaccacactattctcaccatactttttaggatataccctactctatcacccttgcca |
53414893 |
T |
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| Q |
108 |
atgatgatcctaactaccgattgatgaacaaggattgtgacata--gttgttggttaatacaatggattggtatgctttctcattgttttctatcaaaac |
205 |
Q |
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| T |
53414892 |
atgatgatcctaactaccgattgatgaacaaggattgtgacatatagttgttggttaatacaatggattggtatgctttctcattgttttctatcaaaac |
53414793 |
T |
|
| Q |
206 |
tgagcaacaagagttctacctttgattatcgaacccagcgacgaggtcattgtcaacatctcccttaacttgaggacggttttgatgaagtgatgctata |
305 |
Q |
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| T |
53414792 |
tgagtaacaagagttctacctttgtttatcgaacccagcgacgaggtcattgtcaatatctcccttaacttgaggacggttttgatgaagtgatgctata |
53414693 |
T |
|
| Q |
306 |
gtatgagtcttagaaaaagactcggtaataaaacgcagtatcataatgaaaaacaaaccatcggatgaacgaaacttttagctaagaaacaatacttgtt |
405 |
Q |
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| T |
53414692 |
gtatgagtcttagaaaaagactcggtaataaaaggcagtatcataatgaaaaacaaaccatcggatgaacgaaacttttagctaagaaacaatacctgtt |
53414593 |
T |
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| Q |
406 |
taaaccctttcttttcttgttcgatttaccagtggaagtggacgacggactgcaatagaaaatgctgtagaacatggtgggacgcggcgacactgtgaaa |
505 |
Q |
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| T |
53414592 |
taaaccctttcttttcttgttcgatttagcagtggaagtggacgacggactggaatagaaaatgctgtagaacatggtgggacgcggcgacactgtgaaa |
53414493 |
T |
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| Q |
506 |
agacgagctacggttttcaa |
525 |
Q |
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| T |
53414492 |
agatgagttagggttttcaa |
53414473 |
T |
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