View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4630-Insertion-21 (Length: 332)
Name: NF4630-Insertion-21
Description: NF4630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4630-Insertion-21 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 8 - 332
Target Start/End: Complemental strand, 20532204 - 20531880
Alignment:
| Q |
8 |
ccaacatagttctcctatgtcaccacttactcagaaggatttcacaagttcaccacttgaattcataagcccttctttttcttcaccccacttaggtatg |
107 |
Q |
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| T |
20532204 |
ccaacatagttctcctatgtcaccacttactccgaaggatttcacaagttcaccacttgaattcataagcccttctttttcttcaccccacttaggtatg |
20532105 |
T |
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| Q |
108 |
tctctttgctcaaaccctaatattcaaaacccattacctatgaacaattcaatccttcaaaatacgaatttttcctatgaaaattctgattttgctgaga |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20532104 |
tctctttgctcaaaccctaatattcaaaacccattacctatgaacaattcaatccttcaaaatacgaatttttcctatgaaaattctgattttgctgaga |
20532005 |
T |
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| Q |
208 |
ttcaaagcacagtagttccaacaagtcatgtcccagacaagaagatgatgtatgagttggagaaaaagcttcatgaagacattgatgatgaagaggaatg |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
20532004 |
ttcaaagcacagtagttccaacaagtcatgtcccagacaagaagatgatgtatgagttggagaaaaagcttcatgaagacattgatgatgaagaagaatg |
20531905 |
T |
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| Q |
308 |
gtcactagttgtttctgggattatg |
332 |
Q |
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||||||||||||||||||||||||| |
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| T |
20531904 |
gtcactagttgtttctgggattatg |
20531880 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 2826157 - 2826077
Alignment:
| Q |
8 |
ccaacatagttctcctatgtcaccacttactcagaaggatttcacaagttcaccacttgaattcataagcccttctttttc |
88 |
Q |
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|||||||||||||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
2826157 |
ccaacatagttctcctatgtcaccactttctccaatggatttcacaagtttgccacttgaattcataagcccttctttttc |
2826077 |
T |
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