View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4630-Insertion-23 (Length: 312)
Name: NF4630-Insertion-23
Description: NF4630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4630-Insertion-23 |
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Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 8 - 299
Target Start/End: Original strand, 21120731 - 21121022
Alignment:
| Q |
8 |
caatctagagtcctttcacaaggtacgttctctttgaatacggtccagaggcgtggtgttgttgttgtttgcgaggctgctccaaagaaggttgattccg |
107 |
Q |
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| T |
21120731 |
caatctagagtcctttcacaaggtacgttctctttgaatacggtccagaggcgtggtgttgttgttgtttgcgaggctgctccaaagaaggttgattccg |
21120830 |
T |
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| Q |
108 |
ccattaagaaagctcttcaggctgagaggcgtcgcgtttacaacaaagctcgtaaatccgagattagaacccgtactaagaaggtaccataactgtaact |
207 |
Q |
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| T |
21120831 |
ccattaagaaagctcttcaggctgagaggcgtcgcgtttacaacaaagctcgtaaatccgagattagaacccgtactaagaaggtaccataactgtaact |
21120930 |
T |
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| Q |
208 |
ttaactattttattttagattgctgtattatagctatgacattttctcgaattattatcggtgtcggcatgttagtgttggttggtgtcagt |
299 |
Q |
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| T |
21120931 |
ttaactattttattttagattgctgtattatagctatgacattttctcgaattattatcggtgtcggcatgttagtgttggttggtgtcagt |
21121022 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 4859142 - 4859186
Alignment:
| Q |
242 |
tatgacattttctcgaattattatcggtgtcggcatgttagtgtt |
286 |
Q |
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| T |
4859142 |
tatgtcattttctcaaattattattggtgtcgacatgttagtgtt |
4859186 |
T |
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