View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4630-Insertion-4 (Length: 1010)

Name: NF4630-Insertion-4
Description: NF4630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4630-Insertion-4
NF4630-Insertion-4
[»] chr3 (24 HSPs)
chr3 (8-968)||(50021545-50022536)
chr3 (447-511)||(4974279-4974343)
chr3 (447-511)||(23555452-23555516)
chr3 (458-511)||(21296734-21296787)
chr3 (447-511)||(2086745-2086809)
chr3 (447-511)||(29830824-29830888)
chr3 (459-515)||(30499930-30499986)
chr3 (565-625)||(33817485-33817545)
chr3 (447-511)||(36266212-36266276)
chr3 (454-511)||(22809255-22809312)
chr3 (447-511)||(10448742-10448806)
chr3 (728-814)||(33817616-33817706)
chr3 (460-511)||(28741281-28741332)
chr3 (447-512)||(40581131-40581196)
chr3 (447-511)||(3645271-3645335)
chr3 (458-506)||(20685744-20685792)
chr3 (447-511)||(20894471-20894535)
chr3 (460-512)||(53261814-53261866)
chr3 (447-510)||(4257355-4257418)
chr3 (449-512)||(48597776-48597839)
chr3 (454-511)||(33946603-33946660)
chr3 (454-511)||(584988-585045)
chr3 (454-487)||(37586253-37586286)
chr3 (454-511)||(40240489-40240545)
[»] chr8 (25 HSPs)
chr8 (447-511)||(19925442-19925506)
chr8 (447-512)||(36907702-36907767)
chr8 (454-512)||(32131407-32131465)
chr8 (447-511)||(30973957-30974021)
chr8 (458-511)||(2019714-2019767)
chr8 (459-511)||(2563326-2563378)
chr8 (447-511)||(13131398-13131462)
chr8 (459-501)||(43577199-43577241)
chr8 (454-511)||(14942392-14942449)
chr8 (458-511)||(38338915-38338968)
chr8 (459-511)||(3664104-3664156)
chr8 (455-511)||(10213814-10213870)
chr8 (447-507)||(37410966-37411026)
chr8 (447-511)||(42102075-42102139)
chr8 (447-511)||(42363370-42363434)
chr8 (449-511)||(16706011-16706073)
chr8 (460-511)||(34545673-34545724)
chr8 (454-500)||(19925536-19925582)
chr8 (449-511)||(28879168-28879230)
chr8 (449-511)||(32212926-32212988)
chr8 (447-488)||(7638514-7638555)
chr8 (446-511)||(29713158-29713223)
chr8 (454-511)||(34286475-34286532)
chr8 (460-501)||(37966258-37966299)
chr8 (458-511)||(38195455-38195508)
[»] chr4 (37 HSPs)
chr4 (447-511)||(29877607-29877671)
chr4 (447-511)||(23297406-23297470)
chr4 (453-511)||(42611928-42611986)
chr4 (454-512)||(48591334-48591392)
chr4 (458-511)||(2702780-2702833)
chr4 (447-512)||(19414096-19414161)
chr4 (447-512)||(46176032-46176097)
chr4 (454-510)||(8130457-8130513)
chr4 (447-511)||(12495700-12495763)
chr4 (448-512)||(35124354-35124418)
chr4 (454-517)||(36741022-36741085)
chr4 (448-511)||(38345876-38345939)
chr4 (460-511)||(42617296-42617347)
chr4 (449-511)||(34633367-34633429)
chr4 (459-509)||(40699326-40699376)
chr4 (449-511)||(42153073-42153135)
chr4 (449-511)||(43699539-43699601)
chr4 (458-511)||(7673421-7673474)
chr4 (454-511)||(22273761-22273818)
chr4 (454-511)||(29996700-29996757)
chr4 (444-512)||(1374414-1374482)
chr4 (447-511)||(10794963-10795027)
chr4 (447-511)||(10796354-10796418)
chr4 (447-499)||(18424331-18424383)
chr4 (447-511)||(22303064-22303128)
chr4 (459-511)||(55802243-55802295)
chr4 (384-442)||(46704248-46704307)
chr4 (449-511)||(3564319-3564381)
chr4 (449-511)||(17222942-17223004)
chr4 (449-511)||(28074477-28074539)
chr4 (449-511)||(28663685-28663747)
chr4 (449-511)||(34526248-34526310)
chr4 (449-511)||(48667783-48667845)
chr4 (454-511)||(3564188-3564245)
chr4 (266-299)||(10365755-10365788)
chr4 (386-442)||(12495624-12495681)
chr4 (458-511)||(22823764-22823817)
[»] chr1 (26 HSPs)
chr1 (454-511)||(391136-391193)
chr1 (447-511)||(16225477-16225541)
chr1 (447-512)||(37148147-37148212)
chr1 (447-512)||(37156972-37157037)
chr1 (449-511)||(47413485-47413547)
chr1 (447-511)||(18327492-18327556)
chr1 (457-512)||(41196620-41196675)
chr1 (454-512)||(26946166-26946224)
chr1 (449-511)||(26988261-26988323)
chr1 (449-511)||(48819412-48819474)
chr1 (447-512)||(32497325-32497390)
chr1 (447-511)||(4068083-4068147)
chr1 (460-512)||(28689969-28690021)
chr1 (447-511)||(37712036-37712100)
chr1 (447-502)||(20169242-20169296)
chr1 (449-488)||(22593341-22593380)
chr1 (447-510)||(35590099-35590162)
chr1 (460-507)||(49971223-49971270)
chr1 (449-511)||(1565286-1565347)
chr1 (449-511)||(28690117-28690179)
chr1 (454-488)||(46689611-46689645)
chr1 (458-511)||(5243468-5243521)
chr1 (447-488)||(10850125-10850166)
chr1 (458-511)||(17348848-17348901)
chr1 (449-490)||(20169377-20169418)
chr1 (447-496)||(51162252-51162301)
[»] chr5 (51 HSPs)
chr5 (447-511)||(15413960-15414024)
chr5 (449-511)||(41059700-41059762)
chr5 (447-507)||(17128250-17128310)
chr5 (447-511)||(26002965-26003029)
chr5 (455-510)||(14243792-14243847)
chr5 (24-90)||(35300681-35300747)
chr5 (447-500)||(29922243-29922296)
chr5 (454-511)||(35536962-35537019)
chr5 (447-508)||(42851993-42852054)
chr5 (447-511)||(1372047-1372111)
chr5 (451-511)||(25332296-25332356)
chr5 (447-511)||(33667446-33667510)
chr5 (447-511)||(33757056-33757120)
chr5 (460-511)||(780634-780685)
chr5 (447-502)||(22201990-22202045)
chr5 (456-511)||(40452388-40452443)
chr5 (460-515)||(43318967-43319022)
chr5 (449-511)||(35083352-35083414)
chr5 (449-511)||(40697119-40697181)
chr5 (454-511)||(3520563-3520620)
chr5 (447-512)||(4728813-4728878)
chr5 (454-511)||(10537137-10537194)
chr5 (447-512)||(11991272-11991337)
chr5 (454-511)||(13739347-13739404)
chr5 (454-507)||(29922104-29922157)
chr5 (462-511)||(41125672-41125721)
chr5 (454-511)||(42558628-42558685)
chr5 (451-511)||(1473467-1473526)
chr5 (447-511)||(1576599-1576663)
chr5 (447-511)||(1608152-1608216)
chr5 (459-511)||(2577481-2577533)
chr5 (447-511)||(12987068-12987132)
chr5 (447-511)||(13060656-13060720)
chr5 (458-509)||(5203498-5203549)
chr5 (444-511)||(11163320-11163387)
chr5 (460-511)||(20458624-20458675)
chr5 (449-512)||(22573752-22573815)
chr5 (731-821)||(35300184-35300275)
chr5 (454-511)||(2878737-2878794)
chr5 (449-511)||(12467381-12467443)
chr5 (449-511)||(17868115-17868177)
chr5 (449-511)||(41125787-41125849)
chr5 (454-512)||(42558781-42558838)
chr5 (447-512)||(6008333-6008398)
chr5 (447-524)||(7565324-7565401)
chr5 (262-295)||(9202798-9202831)
chr5 (447-488)||(10537273-10537314)
chr5 (447-488)||(11706972-11707013)
chr5 (454-511)||(13739244-13739301)
chr5 (458-511)||(15709956-15710009)
chr5 (463-512)||(41534755-41534804)
[»] chr7 (24 HSPs)
chr7 (447-516)||(38372521-38372590)
chr7 (455-511)||(18837190-18837246)
chr7 (447-511)||(22319345-22319409)
chr7 (447-511)||(24371460-24371524)
chr7 (447-511)||(35809058-35809122)
chr7 (449-511)||(29390462-29390524)
chr7 (453-511)||(40629476-40629534)
chr7 (447-512)||(28004551-28004616)
chr7 (447-511)||(29390604-29390668)
chr7 (454-512)||(37779339-37779396)
chr7 (454-511)||(29378763-29378820)
chr7 (447-511)||(22032730-22032794)
chr7 (447-511)||(34922899-34922963)
chr7 (459-511)||(35331110-35331162)
chr7 (449-524)||(33287973-33288048)
chr7 (460-511)||(47654481-47654532)
chr7 (447-501)||(7775342-7775396)
chr7 (449-511)||(25908407-25908469)
chr7 (449-511)||(33204947-33205009)
chr7 (449-511)||(34923046-34923108)
chr7 (454-488)||(44613534-44613568)
chr7 (458-511)||(10383585-10383638)
chr7 (454-483)||(20888569-20888598)
chr7 (454-511)||(26331779-26331836)
[»] chr2 (30 HSPs)
chr2 (449-517)||(38471847-38471915)
chr2 (442-505)||(4026900-4026963)
chr2 (447-506)||(4090462-4090521)
chr2 (459-511)||(2790137-2790189)
chr2 (459-511)||(38215991-38216043)
chr2 (447-511)||(40301320-40301384)
chr2 (447-522)||(12683660-12683735)
chr2 (449-512)||(37420019-37420082)
chr2 (453-511)||(2757129-2757187)
chr2 (449-511)||(5903651-5903713)
chr2 (449-511)||(36501426-36501488)
chr2 (454-511)||(5903733-5903790)
chr2 (455-511)||(23956314-23956370)
chr2 (459-512)||(33321222-33321275)
chr2 (447-488)||(34913444-34913485)
chr2 (460-513)||(35515547-35515600)
chr2 (454-512)||(27709729-27709784)
chr2 (460-511)||(2401688-2401739)
chr2 (454-497)||(27703519-27703562)
chr2 (574-612)||(6561244-6561282)
chr2 (449-511)||(8832570-8832632)
chr2 (449-511)||(13056238-13056300)
chr2 (458-488)||(17797332-17797362)
chr2 (454-511)||(21788425-21788482)
chr2 (460-502)||(27881064-27881106)
chr2 (458-503)||(1768747-1768791)
chr2 (454-511)||(12442920-12442977)
chr2 (470-511)||(13097884-13097925)
chr2 (447-500)||(16108517-16108570)
chr2 (458-511)||(22422233-22422286)
[»] scaffold0157 (2 HSPs)
scaffold0157 (447-511)||(24714-24777)
scaffold0157 (386-442)||(24796-24853)
[»] chr6 (19 HSPs)
chr6 (447-511)||(3211055-3211119)
chr6 (447-511)||(6632627-6632691)
chr6 (449-511)||(10755194-10755256)
chr6 (454-511)||(10873953-10874011)
chr6 (449-511)||(12816812-12816874)
chr6 (449-511)||(35071339-35071401)
chr6 (454-511)||(35111396-35111453)
chr6 (447-511)||(4808540-4808604)
chr6 (447-511)||(9894734-9894798)
chr6 (447-499)||(10687287-10687339)
chr6 (447-511)||(25430817-25430881)
chr6 (447-503)||(30533957-30534012)
chr6 (449-511)||(7267895-7267957)
chr6 (454-512)||(8014756-8014813)
chr6 (449-507)||(10687423-10687480)
chr6 (254-311)||(7485110-7485167)
chr6 (458-511)||(10184394-10184447)
chr6 (462-511)||(11795528-11795577)
chr6 (449-502)||(22816506-22816558)
[»] scaffold0100 (1 HSPs)
scaffold0100 (447-511)||(38506-38570)
[»] scaffold0004 (1 HSPs)
scaffold0004 (447-511)||(242693-242757)


Alignment Details
Target: chr3 (Bit Score: 685; Significance: 0; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 685; E-Value: 0
Query Start/End: Original strand, 8 - 968
Target Start/End: Original strand, 50021545 - 50022536
Alignment:
Q  8 gaagcgatctgttcgtatgcacgctgagaaaaccggcaacaatgcttttctcaaccttatccctcttcttgtcgtgagttttcttattctctttagattt 107  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50021545 gaagcgatctgttcgtatgcacgctgagaaaactggcaacaatgcttttctcaaccttatccctcttcttgtcgtgagttttcttattctctttagattt 50021644  T
Q  108 cgctgttttattcatt----------tttcgattgaataacgtgttctttttcttttattgattttgtgtgataaagcgaagatatttggttattttgtc 197  Q
    ||||||||||||||||          |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50021645 cgctgttttattcattcatgaatgaatttcgattgaataacgtgttgtttttcttttattgattttgtgtgataaagctaagatatttggttattttgtc 50021744  T
Q  198 ctgatttctgttttcttttgttacgtttggattgac----------------------ataagtgcagattaatctgttttgagagaacttatgaaaaca 275  Q
     |||||||||||||||||||||||||||||||||||                      ||||||||||||||||||||||||||||||||||||||||||    
T  50021745 ttgatttctgttttcttttgttacgtttggattgacctgtttgaatttagttattgacataagtgcagattaatctgttttgagagaacttatgaaaaca 50021844  T
Q  276 gcttattgtttatatgaaaaaa-gtcttactttatttagcttgggttgttgaaatactattagcacttgggacatgcccggattgcaaataaacaaacaa 374  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||    
T  50021845 gcttattgtttatatgaaaaaaagtctaactttatttagcttgggttgttgaaatactattagcacttggaacatgcccggattgcaaa--------caa 50021936  T
Q  375 ttctgttaat-cataagttcccactaatgaattttttatctcattagctgttttttcataagctaccttgatcatacattaaagcttatttatttgcata 473  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  50021937 ttctgttaattcataagttcccactaatgaaatttttatctcataagctgttttttcataaactaccttgatcatacatcaaagcttatttatttgcata 50022036  T
Q  474 aactgttttgcataatctctaaaataagccaatccaaataagcctttatgtcaggactcacgagcacttatgcaatatgcggttttatagtgcttctgca 573  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  50022037 aactgttttgcataatctctaaaataagccaatccaaacaagcctttatgtcaggactcacgagcacttatgctatatgcgcttttatagcgcttctgca 50022136  T
Q  574 gctataaacacttaatttagttgtttatccaaatagggtgatagtcatgtcagttagtattaatttttagaattacaattgactttttatgttttaatta 673  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50022137 gctataaacacttaatttagttgtttatccaaatagggtgatagtcatgtcagttagtattaatttttagaatcacaattgactttttatgttttaatta 50022236  T
Q  674 ctagac-atattatgaggacttgttgatattgttgttaactcttgtgaggatttgtactgaatcagggaaatgttggtttgattttcgc-aaaggtgacc 771  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||     
T  50022237 ctagactatattatgaggacttgttgatattgttgttaactcttgtgaggatttgtactgaatcagggaaatgttggtttgattttcacaaaaggtgact 50022336  T
Q  772 tgaaggaagtcagcgaagaagttgctaaatacaaggtgaagttaccttttcacggttatcatatgttatgttttttagtctgtcatgtacaatgttattg 871  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50022337 tgaaggaagtcagtgaagaagttgctaaatacaaggtgaagttaccttttcacggttatcatatgttatgttttttagtctgtcatgtacaatgttattg 50022436  T
Q  872 tgatgt---tctggtttttctgcctgcttttagtcgataggttt-aatatgatccctaaatgtgaaatag-cgatatagaaagggccggttcatagaatt 966  Q
    ||||||   ||||||||||||| ||||||||||| ||||  ||| |||||||||| |||||||||||| | | ||||||||| || | ||||||||||||    
T  50022437 tgatgttgctctggtttttctg-ctgcttttagttgatacatttaaatatgatccttaaatgtgaaatcgccaatatagaaa-ggtctgttcatagaatt 50022534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 4974343 - 4974279
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||  |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  4974343 atacattagtgcttatttatttgcataagctgctttgcataagctctaaaataagccaatccaaa 4974279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 23555516 - 23555452
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||||||||||||||||||||||||||| | |||| ||| ||||||||||||||||||    
T  23555516 atacataaaagcttatttatttgcataaactgtttcgtataagctcaaaaataagccaatccaaa 23555452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 21296787 - 21296734
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  21296787 cttatttatttgcataaattgttttgcataatctcaaaaataagtcaatccaaa 21296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 2086745 - 2086809
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||| |||||||||| ||||| |||||| |||||| ||||||||||||||||||||||    
T  2086745 atacataaaagtttatttatttacataagctgtttagcataagctctaaaataagccaatccaaa 2086809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 29830824 - 29830888
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||  ||||||||    
T  29830824 atacataaaaacttatttatttgcataaactgttttgtataagctctaaaataagataatccaaa 29830888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 459 - 515
Target Start/End: Complemental strand, 30499986 - 30499930
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaataag 515  Q
    ||||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  30499986 ttatttatttgcataaactgttttgtataagctctaaaataagttaatccaaataag 30499930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 565 - 625
Target Start/End: Original strand, 33817485 - 33817545
Alignment:
Q  565 gcttctgcagctataaacacttaatttagttgtttatccaaatagggtgatagtcatgtca 625  Q
    |||| ||||||||||| | ||||||||||||||||||||||| |||||||| |||||||||    
T  33817485 gcttgtgcagctataagcccttaatttagttgtttatccaaacagggtgatggtcatgtca 33817545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 36266276 - 36266212
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||| ||||||||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  36266276 atacataaaagtttatttatttgcataaactgttttatataagctctaaaataagctaatccaaa 36266212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 22809255 - 22809312
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||| |||| ||||    
T  22809255 aaagcttatttatttgcataagctgttttgcataacctcaaaaataagtcaattcaaa 22809312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 10448806 - 10448742
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| || || |||||||||||||||  |||||||||||| ||||||||||||| ||||||||    
T  10448806 atacataaaggcatatttatttgcataagttgttttgcataagctctaaaataagctaatccaaa 10448742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 728 - 814
Target Start/End: Original strand, 33817616 - 33817706
Alignment:
Q  728 tactgaatcagggaaatgttggtttgattttcgc-aaaggtgacctgaaggaagtcagcgaagaa---gttgctaaatacaaggtgaagtt 814  Q
    ||||| |||||||||||||||||||||||||| | ||||| ||| |||||||||| || ||||||   |||||||| ||||||||| ||||    
T  33817616 tactggatcagggaaatgttggtttgattttcacaaaaggcgacttgaaggaagtgagtgaagaagaggttgctaagtacaaggtggagtt 33817706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 460 - 511
Target Start/End: Original strand, 28741281 - 28741332
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||| ||||||||||| | ||||||||||||| ||||||||    
T  28741281 tatttatttgcataagctgttttgcatgaactctaaaataagctaatccaaa 28741332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 40581131 - 40581196
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||| |||||||||||||||||||||  |||||||||||| ||| || ||||| ||||| ||||    
T  40581131 atacataaaagcttatttatttgcataagttgttttgcataagctcaaagataagtcaatcaaaat 40581196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 3645335 - 3645271
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||| ||||| |||||||  |||| ||||||||||||| ||||||||    
T  3645335 atacataaaaacttatttatttacataagctgttttatataagctctaaaataagctaatccaaa 3645271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 458 - 506
Target Start/End: Complemental strand, 20685792 - 20685744
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaat 506  Q
    ||||||||||||| ||| ||||||||||||| ||| |||||||||||||    
T  20685792 cttatttatttgcgtaagctgttttgcataagctcaaaaataagccaat 20685744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 20894535 - 20894471
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||| ||||| |||||||  |||| ||||||||||||| ||||||||    
T  20894535 atacataaaaacttatttatttacataagctgttttatataagctctaaaataagctaatccaaa 20894471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 460 - 512
Target Start/End: Original strand, 53261814 - 53261866
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||||||||| ||||| | ||||| ||| |||||||||||||||||||    
T  53261814 tatttatttgcataagctgttgtccataagctcaaaaataagccaatccaaat 53261866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 510
Target Start/End: Original strand, 4257355 - 4257418
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaa 510  Q
    |||||| ||| |||||||||||||||||  ||||||  |||| ||||||||||||| |||||||    
T  4257355 atacataaaaacttatttatttgcataagttgttttatataagctctaaaataagctaatccaa 4257418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 512
Target Start/End: Complemental strand, 48597839 - 48597776
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||| |||||||||||||||||| | ||| |||| | ||| ||| |||||||||||||||||||    
T  48597839 acataaaagcttatttatttgcaaacactatttttcgtaagctcaaaaataagccaatccaaat 48597776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 33946603 - 33946660
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagc-caatccaaa 511  Q
    ||||||||||||||||||||| || |||||||||| ||| ||||||||| |||||||||    
T  33946603 aaagcttatttatttgcataagctattttgcataagctc-aaaataagctcaatccaaa 33946660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 585045 - 584988
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||||  |||||| ||||| ||  |||||||| |||||||||    
T  585045 aaagcttatttatttgcataatgtgttttacataagctgaaaaataagtcaatccaaa 584988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 487
Target Start/End: Complemental strand, 37586286 - 37586253
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcata 487  Q
    ||||||||||||||||||||||||||||| ||||    
T  37586286 aaagcttatttatttgcataaactgttttccata 37586253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 40240545 - 40240489
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||| || |||| ||||| ||| |||||||| |||||||||    
T  40240545 aaagcttatttatttgcataagctatttttcataagctc-aaaataagtcaatccaaa 40240489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 2e-18; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 19925442 - 19925506
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  19925442 atacattaatgcttatttatttgcataaactgttatgcataagctctaaaataagtcaatccaaa 19925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 36907702 - 36907767
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||||||  ||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  36907702 atacattaatacttctttatttgcataaactgctttgcataagctctaaaataagccaatccaaat 36907767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 454 - 512
Target Start/End: Complemental strand, 32131465 - 32131407
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||    
T  32131465 aaagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaat 32131407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 30974021 - 30973957
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||| |||| ||||||| ||||| ||| ||||||||| ||||||||||||||||||||||    
T  30974021 atacattaatgcttctttatttacataagctgctttgcataagctctaaaataagccaatccaaa 30973957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 2019714 - 2019767
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||  |||||||||||| |||||||||||| |||||||||    
T  2019714 cttatttatttgcataagatgttttgcataagctctaaaataagtcaatccaaa 2019767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 459 - 511
Target Start/End: Complemental strand, 2563378 - 2563326
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||| | |||| ||||| ||||||||||||||||||||||    
T  2563378 ttatttatttgcataaattattttacataacctctaaaataagccaatccaaa 2563326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 13131462 - 13131398
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||||||||||||||||||||  |||||||||||| ||  ||||||||| ||||||||    
T  13131462 atacataaaagcttatttatttgcataatttgttttgcataagctaaaaaataagcaaatccaaa 13131398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 43577241 - 43577199
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataag 501  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  43577241 ttatttatttgcataaactattttgcataagctctaaaataag 43577199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 14942449 - 14942392
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||| | |||||  |||||| ||||| ||||||||||||||||||||||    
T  14942449 aaagcttatttatatacataagttgttttacataagctctaaaataagccaatccaaa 14942392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 38338915 - 38338968
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||| |||||||  |||| ||||||||||||| ||||||||    
T  38338915 cttatttatttgcataagctgttttatataagctctaaaataagctaatccaaa 38338968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 459 - 511
Target Start/End: Complemental strand, 3664156 - 3664104
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||| ||||  |||| ||||||||||||| ||||||||    
T  3664156 ttatttatttgcataaactattttatataagctctaaaataagctaatccaaa 3664104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 455 - 511
Target Start/End: Original strand, 10213814 - 10213870
Alignment:
Q  455 aagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||| || |||| ||||| ||| ||||||| ||||||||||    
T  10213814 aagcttatttatttgcataagctatttttcataagctcaaaaataatccaatccaaa 10213870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 507
Target Start/End: Original strand, 37410966 - 37411026
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatc 507  Q
    |||||| ||| ||||||||||| |||||||||||||  |||| ||||||||||||| ||||    
T  37410966 atacataaaaacttatttatttacataaactgttttatataagctctaaaataagctaatc 37411026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 42102139 - 42102075
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||||||||| |||||||  |||| ||||||||||||  ||||||||    
T  42102139 atacataaaaacttatttatttgcataagctgttttatataagctctaaaataagttaatccaaa 42102075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 42363370 - 42363434
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||||||||| || ||||  |||| ||||||||||||| ||||||||    
T  42363370 atacataaaaacttatttatttgcataagctattttatataagctctaaaataagctaatccaaa 42363434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 16706073 - 16706011
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagcc-aatccaaa 511  Q
    |||| ||||| ||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||    
T  16706073 acataaaagcgtatttatttgcataagctgttttgcataagctc-aaaataagcctaatccaaa 16706011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 511
Target Start/End: Original strand, 34545673 - 34545724
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||| | |||||||||| ||||||||||| | ||||||||    
T  34545673 tatttatttgcataaattattttgcataagctctaaaataaactaatccaaa 34545724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 500
Target Start/End: Complemental strand, 19925582 - 19925536
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataa 500  Q
    ||||||||||||||||||||| |||||||| |||| | |||||||||    
T  19925582 aaagcttatttatttgcataagctgttttgtataagccctaaaataa 19925536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 28879168 - 28879230
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| ||||| ||  |||||||| |||||||||    
T  28879168 acataaaagcttatttatttgcataagctatttttcataagctaaaaaataagtcaatccaaa 28879230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 32212988 - 32212926
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| ||||| |   ||||||||||||||||||    
T  32212988 acataaaagcttatttatttgcataagctatttttcataagcaaaaaaataagccaatccaaa 32212926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 488
Target Start/End: Complemental strand, 7638555 - 7638514
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataa 488  Q
    |||||| |||||| |||||||||||||||| |||||||||||    
T  7638555 atacataaaagctgatttatttgcataaacagttttgcataa 7638514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 446 - 511
Target Start/End: Complemental strand, 29713223 - 29713158
Alignment:
Q  446 catacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||| |||  |||||||||||||||||| |||||  |||| || |||||||||| ||||||||    
T  29713223 catacataaaaatttatttatttgcataaaccgttttatataagctttaaaataagctaatccaaa 29713158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 34286532 - 34286475
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||| || |||| ||||| ||| |||||||| |||| ||||    
T  34286532 aaagcttatttatttgcataacctatttttcataagctcaaaaataagtcaattcaaa 34286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 37966258 - 37966299
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataag 501  Q
    ||||||||||||||| || |||||||||| ||||||||||||    
T  37966258 tatttatttgcataagctattttgcataaactctaaaataag 37966299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 38195508 - 38195455
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||  ||||||  |||| ||||||||||||| ||||||||    
T  38195508 cttatttatttgcataagttgttttatataagctctaaaataagctaatccaaa 38195455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 2e-18; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 29877671 - 29877607
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  29877671 atacataaaagcttatttatttgcataaattgttttgcataagctcaaaaataagccaatccaaa 29877607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 23297470 - 23297406
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||    
T  23297470 atacataaaagcttatttatttgcataagctattttgcataagctcaaaaataagccaatccaaa 23297406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 42611928 - 42611986
Alignment:
Q  453 taaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||||  |||||||||||| ||  ||||||||||||||||||    
T  42611928 taaagcttatttatttgcataagttgttttgcataagctaaaaaataagccaatccaaa 42611986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 454 - 512
Target Start/End: Complemental strand, 48591392 - 48591334
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||||||||||||||| || |||| ||||| ||| |||||||||||||||||||    
T  48591392 aaagcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaat 48591334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 2702780 - 2702833
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||    
T  2702780 cttatttatgtgcataagctgctttgcataagctctaaaataagccaatccaaa 2702833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 447 - 512
Target Start/End: Complemental strand, 19414161 - 19414096
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||| ||| ||||||||||||||||| |||||||  |||| ||||||||||||| |||||||||    
T  19414161 atacataaaaacttatttatttgcataagctgttttctataagctctaaaataagctaatccaaat 19414096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 46176032 - 46176097
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||| ||| ||||||||||||||||| |||||||  |||| ||||||||||||| |||||||||    
T  46176032 atacataaaaacttatttatttgcataagctgttttatataagctctaaaataagctaatccaaat 46176097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 454 - 510
Target Start/End: Complemental strand, 8130513 - 8130457
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaa 510  Q
    ||||||||||||||||||||| ||||||||||||  ||  |||||||||||||||||    
T  8130513 aaagcttatttatttgcataagctgttttgcatatgctaaaaaataagccaatccaa 8130457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 12495700 - 12495763
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||||||||||||||||||||| ||||||||| ||| || |||||||| ||||||||||    
T  12495700 atacataaaagcttatttatttgcataagctgttttgcttaagctataaaataa-ccaatccaaa 12495763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 512
Target Start/End: Complemental strand, 35124418 - 35124354
Alignment:
Q  448 tacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||| |||| |||| ||||||||||| ||||||||||||| ||| |||||||| ||||||||||    
T  35124418 tacataaaaggttatatatttgcataagctgttttgcataagctcaaaaataagtcaatccaaat 35124354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 36741022 - 36741085
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaataagcc 517  Q
    ||||||||||||||||||||| || |||| ||||| ||  |||||||||||||||||| |||||    
T  36741022 aaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatccaaacaagcc 36741085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 511
Target Start/End: Original strand, 38345876 - 38345939
Alignment:
Q  448 tacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||| |||||||||||||||| |||| ||||||||||||| ||| || ||||| |||||||||    
T  38345876 tacataaaagcttatttatttggataagctgttttgcataagctcaaacataagtcaatccaaa 38345939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 460 - 511
Target Start/End: Original strand, 42617296 - 42617347
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||| |||||||| |||| ||||||||||||| ||||||||    
T  42617296 tatttatttgcataagctgttttgtataagctctaaaataagctaatccaaa 42617347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 34633429 - 34633367
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||| ||||||||||||||||  |||||||||||| ||  ||||||||||||||||||    
T  34633429 acataaaagtttatttatttgcataagttgttttgcataagctaaaaaataagccaatccaaa 34633367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 459 - 509
Target Start/End: Complemental strand, 40699376 - 40699326
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatcca 509  Q
    |||||||||||||||| ||||||||||||| ||| | ||||||||||||||    
T  40699376 ttatttatttgcataagctgttttgcataagctcaataataagccaatcca 40699326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 42153135 - 42153073
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| | ||| ||| ||||||||||||||||||    
T  42153135 acataaaagcttatttatttgcataagctattttacgtaagctcaaaaataagccaatccaaa 42153073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 43699539 - 43699601
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||| ||||  |||||| ||||| ||| ||||||||||||||||||    
T  43699539 acataaaagcttatttatttgtataagttgtttttcataagctcaaaaataagccaatccaaa 43699601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 7673474 - 7673421
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||||||||  |||| ||||||||||| | ||||||||    
T  7673474 cttatttatttgcataaactgttttttataagctctaaaataaactaatccaaa 7673421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 22273818 - 22273761
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||| || || ||||||| ||| |||||||| |||||||||    
T  22273818 aaagcttatttatttgcataagctattatgcataagctcaaaaataagtcaatccaaa 22273761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 29996700 - 29996757
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||||| ||||||||| || ||| |||||||| ||| |||||    
T  29996700 aaagcttatttatttgcataaattgttttgcaaaaactcaaaaataagtcaaaccaaa 29996757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 444 - 512
Target Start/End: Original strand, 1374414 - 1374482
Alignment:
Q  444 atcatacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||| ||| ||| ||| |||||||||||||  | |||||||||| ||| |||||||||||||||||||    
T  1374414 atcatgcataaaaacttttttatttgcataagtttttttgcataagctcaaaaataagccaatccaaat 1374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 10794963 - 10795027
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||| || || ||||||||||||| |||||||||||| |||| ||||    
T  10794963 atacataaaaacttatttatttacacaagctgttttgcataagctctaaaataagtcaattcaaa 10795027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 10796418 - 10796354
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||| || ||  |||||||||||| ||||||||||||||||| ||||    
T  10796418 atacataaaaacttatttatttacacaagttgttttgcataagctctaaaataagccaattcaaa 10796354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 499
Target Start/End: Original strand, 18424331 - 18424383
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaata 499  Q
    |||||| |||||||||||||||| ||||| |||||||||||| ||| ||||||    
T  18424331 atacataaaagcttatttatttgtataaattgttttgcataagctcaaaaata 18424383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 22303128 - 22303064
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| |||||||||||||||||||||||||  | || ||||||||||||| ||| ||||    
T  22303128 atacataaaaacttatttatttgcataaactgttttataaaagctctaaaataagctaattcaaa 22303064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 459 - 511
Target Start/End: Original strand, 55802243 - 55802295
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||||||  |||| ||||||||||| | ||||||||    
T  55802243 ttatttatttgcataaactgttttatataagctctaaaataaactaatccaaa 55802295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 46704248 - 46704307
Alignment:
Q  384 tcataagttcccactaatgaattttttatct-cattagctgttttttcataagctacctt 442  Q
    |||||||||| ||||||||||  |||||||| ||| |||||||||||||||| |||||||    
T  46704248 tcataagttctcactaatgaaaattttatcttcataagctgttttttcataaactacctt 46704307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 3564319 - 3564381
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||| |||||||||||||||| || |||| ||||| ||| |||||||| |||||||||    
T  3564319 acataaaagattatttatttgcataagctatttttcataagctcaaaaataagtcaatccaaa 3564381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 17222942 - 17223004
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||| |||||||||||| |||| || |||| ||||| ||| ||||||||||||||||||    
T  17222942 acataaaaacttatttatttgaataagctatttttcataagctcaaaaataagccaatccaaa 17223004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 28074477 - 28074539
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||| ||||||||||||||||| || |||| ||||| ||  ||||||||||||||||||    
T  28074477 acataaaatcttatttatttgcataagctatttttcataaactaaaaaataagccaatccaaa 28074539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 28663685 - 28663747
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||| ||| ||||||||||| |||| ||||| ||| |||||||| |||||||||    
T  28663685 acataaaagcttaattagttgcataaactatttttcataagctcaaaaataagtcaatccaaa 28663747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 34526310 - 34526248
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||||||||||| |||| ||||| ||| ||| |||| |||| ||||    
T  34526310 acataaaagcttatttatttgcataaactatttttcataagctcgaaagtaagtcaattcaaa 34526248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 48667783 - 48667845
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| ||| | ||  ||||||||||||||||||    
T  48667783 acataaaagcttatttatttgcataagctatttttcatgagcttaaaaataagccaatccaaa 48667845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 3564245 - 3564188
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||| ||||| ||||||||||||| ||| |||| ||| |||||||||    
T  3564245 aaagtttatttattttcataagctgttttgcataagctcaaaaacaagtcaatccaaa 3564188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 10365788 - 10365755
Alignment:
Q  266 tatgaaaacagcttattgtttatatgaaaaaagt 299  Q
    |||||||||||||||| |||||||||||||||||    
T  10365788 tatgaaaacagcttatagtttatatgaaaaaagt 10365755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 12495624 - 12495681
Alignment:
Q  386 ataagttcccactaatgaattttttatctc-attagctgttttttcataagctacctt 442  Q
    |||||||| ||||||||||| || |||||  ||||||||||||||||||| |||||||    
T  12495624 ataagttctcactaatgaatattgtatcttgattagctgttttttcataaactacctt 12495681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 22823817 - 22823764
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||  ||||||  |||| ||||||||||||| ||||||||    
T  22823817 cttatttatttgcataagttgttttatataagctctaaaataagctaatccaaa 22823764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 1e-16; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 391193 - 391136
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  391193 aaagcttatttatttgcataagctgttttgcataacctcaaaaataagccaatccaaa 391136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 16225541 - 16225477
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  16225541 atacataaaaacttatttatttacataaactgttttgcataagctctaaaataagtcaatccaaa 16225477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 37148147 - 37148212
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||| |||||||||||||||||| ||| ||||||||| || ||||||||| ||||||||||    
T  37148147 atacattaatgcttatttatttgcataagctgctttgcataagctttaaaataagtcaatccaaat 37148212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 37156972 - 37157037
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||| |||||||||||||||||| ||| ||||||||| || ||||||||| ||||||||||    
T  37156972 atacattaatgcttatttatttgcataagctgctttgcataagctttaaaataagtcaatccaaat 37157037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 47413485 - 47413547
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| ||||| ||| ||||||||||||||||||    
T  47413485 acataaaagcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaa 47413547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 18327556 - 18327492
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||||||||||||||||||||| |||||||| ||||  || |||||||| |||||||||    
T  18327556 atacataaaagcttatttatttgcataagctgttttgaataaattccaaaataagtcaatccaaa 18327492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 457 - 512
Target Start/End: Complemental strand, 41196675 - 41196620
Alignment:
Q  457 gcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||||||||||||||| || |||| ||||| ||| |||||||||||||||||||    
T  41196675 gcttatttatttgcataagctattttacataagctcaaaaataagccaatccaaat 41196620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 454 - 512
Target Start/End: Original strand, 26946166 - 26946224
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||||||||| ||||| | ||||||||||| ||| |||||||| ||||||||||    
T  26946166 aaagcttatttatttacataagccgttttgcataagctcaaaaataagtcaatccaaat 26946224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 26988261 - 26988323
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||| ||||||||||||||||| |||| ||||| ||| |||||||| |||||||||    
T  26988261 acataaaagctaatttatttgcataaactatttttcataagctcaaaaataagtcaatccaaa 26988323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 48819412 - 48819474
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| ||||| ||  ||||||||||||||||||    
T  48819412 acataaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatccaaa 48819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 32497325 - 32497390
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||| ||| ||||||||||||||||| |||||||  |||| ||| ||||||||| |||||||||    
T  32497325 atacataaaaacttatttatttgcataagctgttttatataagctccaaaataagctaatccaaat 32497390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 4068147 - 4068083
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||||||||||||||||| || || ||||||| || ||  ||||||||||||||||||    
T  4068147 atacataaaagcttatttatttgcacaagctattttgcaaaagctaaaaaataagccaatccaaa 4068083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 460 - 512
Target Start/End: Complemental strand, 28690021 - 28689969
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||||||||| ||||| ||||||| ||  |||||||||||||||||||    
T  28690021 tatttatttgcataagctgttctgcataaactaaaaaataagccaatccaaat 28689969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 37712100 - 37712036
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||||||||| |||||||||||||||||| ||| | ||| |||||||  |||||||||    
T  37712100 atacataaaagcttattcatttgcataaactgtttttcattagctcaaaaataaatcaatccaaa 37712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 502
Target Start/End: Complemental strand, 20169296 - 20169242
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagc 502  Q
    |||||| ||||||||||||||||||||| ||||||| ||||| ||| |||||||||    
T  20169296 atacataaaagcttatttatttgcataagctgtttttcataagctc-aaaataagc 20169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 488
Target Start/End: Complemental strand, 22593380 - 22593341
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataa 488  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  22593380 acataaaagcttatttatttgcataagctgttttgcataa 22593341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 510
Target Start/End: Complemental strand, 35590162 - 35590099
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaa 510  Q
    |||||| |||||||||||||||||||||  |||||| ||||| ||  |||||||| ||||||||    
T  35590162 atacataaaagcttatttatttgcataagttgttttacataagctaaaaaataagtcaatccaa 35590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 507
Target Start/End: Complemental strand, 49971270 - 49971223
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatc 507  Q
    |||||||||||||||  |||||||||||| ||||||||||||| ||||    
T  49971270 tatttatttgcataagttgttttgcataagctctaaaataagctaatc 49971223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 1565347 - 1565286
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||||| || || |||| ||||| ||| ||||||||||||||||||    
T  1565347 acataaaagcttatttatttgca-aagctatttttcataagctcaaaaataagccaatccaaa 1565286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 28690117 - 28690179
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| ||||| ||| |||| ||| |||||||||    
T  28690117 acataaaagcttatttatttgcataagctatttttcataagctcaaaaacaagtcaatccaaa 28690179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 488
Target Start/End: Original strand, 46689611 - 46689645
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataa 488  Q
    ||||||| |||||||||||||||||||||||||||    
T  46689611 aaagcttttttatttgcataaactgttttgcataa 46689645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 5243468 - 5243521
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||| |||||||  |||| ||||||||||||| ||| ||||    
T  5243468 cttatttatttgcataagctgttttatataagctctaaaataagctaattcaaa 5243521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 488
Target Start/End: Original strand, 10850125 - 10850166
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataa 488  Q
    |||||| |||||||||||||||||| ||||| ||||||||||    
T  10850125 atacataaaagcttatttatttgcaaaaactattttgcataa 10850166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 17348901 - 17348848
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||  ||||||  |||| ||||||||||||| ||||||||    
T  17348901 cttatttatttgcataagttgttttatataaactctaaaataagctaatccaaa 17348848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 449 - 490
Target Start/End: Original strand, 20169377 - 20169418
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatc 490  Q
    |||| ||| ||||||||||||||||| |||||||||||||||    
T  20169377 acataaaaacttatttatttgcataagctgttttgcataatc 20169418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 496
Target Start/End: Complemental strand, 51162301 - 51162252
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaa 496  Q
    ||||||||| |||||||||||||||||| ||  ||||||||| |||||||    
T  51162301 atacattaatgcttatttatttgcataagctactttgcataagctctaaa 51162252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 4e-16; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 15414024 - 15413960
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||  ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  15414024 atacattaatacttatttatttgcataagctgttttgcataagctctaaaataagtcaatccaaa 15413960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 41059762 - 41059700
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  41059762 acataaaagcttatttatttgcataaactgtttttcataagctcaaaaataagcccatccaaa 41059700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 17128310 - 17128250
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatc 507  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||    
T  17128310 atacataaaagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatc 17128250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 26003029 - 26002965
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||  ||||||||    
T  26003029 atacataaaaacttatttatttgcataaactgttttgtataagctctaaaataagttaatccaaa 26002965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 455 - 510
Target Start/End: Complemental strand, 14243847 - 14243792
Alignment:
Q  455 aagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaa 510  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  14243847 aagcttatttatttacataagctgttttgcataatctcaaaaataagtcaatccaa 14243792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 35300747 - 35300681
Alignment:
Q  24 atgcacgctgagaaaaccggcaacaatgcttttctcaaccttatccctcttcttgtcgtgagttttc 90  Q
    ||||||||||||||||| || |||||||| ||||| |||||||||||||| ||||| || |||||||    
T  35300747 atgcacgctgagaaaactgggaacaatgcgtttcttaaccttatccctctccttgttgtaagttttc 35300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 447 - 500
Target Start/End: Original strand, 29922243 - 29922296
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataa 500  Q
    |||||| ||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  29922243 atacataaaaacttatttatttgcataaactgttttgcataagctcaaaaataa 29922296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 35536962 - 35537019
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||| || |||| ||||||||| |||||||| |||||||||    
T  35536962 aaagcttatttatttgcataagctatttttcataatctcaaaaataagtcaatccaaa 35537019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 447 - 508
Target Start/End: Complemental strand, 42852054 - 42851993
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatcc 508  Q
    |||||| |||||||||||||||| |||| ||||||||||||| | | |||||||||||||||    
T  42852054 atacataaaagcttatttatttgaataagctgttttgcataagcccaaaaataagccaatcc 42851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 1372047 - 1372111
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||||  ||||||||| ||||||||||||||||||| ||| |||||||| |||||||||    
T  1372047 atacataaaagtgtatttatttacataaactgttttgcataagctcaaaaataagtcaatccaaa 1372111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 451 - 511
Target Start/End: Original strand, 25332296 - 25332356
Alignment:
Q  451 attaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||| |||||||||||||||||| || |||| ||||| |||||||||||| |||||||||    
T  25332296 attaatgcttatttatttgcataagctattttacataaactctaaaataagacaatccaaa 25332356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 33667446 - 33667510
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||||||||| |||||||  |||| ||||||||||||| ||||||||    
T  33667446 atacataaaaacttatttatttgcataagctgttttatataagctctaaaataagctaatccaaa 33667510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 33757120 - 33757056
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||||||||| |||||||  |||| ||||||||||||| ||||||||    
T  33757120 atacataaaaacttatttatttgcataagctgttttatataagctctaaaataagctaatccaaa 33757056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 460 - 511
Target Start/End: Original strand, 780634 - 780685
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  780634 tatttatttgcataaactgttttatataagctctaaaataagctaatccaaa 780685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 447 - 502
Target Start/End: Original strand, 22201990 - 22202045
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagc 502  Q
    |||||| ||||||||||||||| ||||| ||||||||||||| ||| |||||||||    
T  22201990 atacataaaagcttatttatttacataagctgttttgcataagctcaaaaataagc 22202045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 456 - 511
Target Start/End: Complemental strand, 40452443 - 40452388
Alignment:
Q  456 agcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||| || |||| ||||| ||| ||||||||||||||||||    
T  40452443 agcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaa 40452388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 43319022 - 43318967
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaataag 515  Q
    |||||||||||||||  |||||||||||| ||||||||||||| || |||||||||    
T  43319022 tatttatttgcataagttgttttgcataagctctaaaataagctaaaccaaataag 43318967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 35083352 - 35083414
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||||||||||| |||  ||||| ||| ||||||| ||||||||||    
T  35083352 acataaaagcttatttatttgcataaactatttatcataaactcaaaaataaaccaatccaaa 35083414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 40697119 - 40697181
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||| |||| || |||| ||||| ||| ||||||||||||||||||    
T  40697119 acataaaagcttatttatttgtataagctatttttcataagctcaaaaataagccaatccaaa 40697181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 3520563 - 3520620
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||| ||||||||||||||||||| ||  |||||||| |||||||||    
T  3520563 aaaggttatttatttacataaactgttttgcataagctaaaaaataagtcaatccaaa 3520620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 512
Target Start/End: Complemental strand, 4728878 - 4728813
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||| ||| ||||||||||||||||| |||||||  |||| ||||||||||| | |||||||||    
T  4728878 atacataaaaacttatttatttgcataagctgttttatataagctctaaaataacctaatccaaat 4728813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 10537194 - 10537137
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||| ||||||||||| || |||| ||||| ||| ||||||||||||||||||    
T  10537194 aaagcttatatatttgcataagctatttttcataaactcaaaaataagccaatccaaa 10537137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 512
Target Start/End: Complemental strand, 11991337 - 11991272
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||| ||||||||||||||| |||||  |||||||||||| |  ||||||||| ||||||||||    
T  11991337 atacataaaagcttatttatttacataagttgttttgcataagcattaaaataagtcaatccaaat 11991272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 13739347 - 13739404
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||||  | |||| ||||| ||| ||||||||||||||||||    
T  13739347 aaagcttatttatttgcataagttatttttcataaactcaaaaataagccaatccaaa 13739404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 507
Target Start/End: Complemental strand, 29922157 - 29922104
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatc 507  Q
    ||||||||||||||||||||| || |||| ||||| ||| ||||||||||||||    
T  29922157 aaagcttatttatttgcataagctatttttcataaactcaaaaataagccaatc 29922104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 462 - 511
Target Start/End: Complemental strand, 41125721 - 41125672
Alignment:
Q  462 tttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||  |||||||||||| ||| ||||||||||||||||||    
T  41125721 tttatttgcataagttgttttgcataagctcaaaaataagccaatccaaa 41125672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 42558685 - 42558628
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||| || |||| ||||| ||| ||||||||||||| ||||    
T  42558685 aaagcttatttatttgcataagctatttttcataagctcaaaaataagccaattcaaa 42558628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 451 - 511
Target Start/End: Original strand, 1473467 - 1473526
Alignment:
Q  451 attaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||||||| ||  ||| ||||||||| ||||| ||||||||||||    
T  1473467 attaaagcttatttatttgcataagctaattttcataatctcaaaaat-agccaatccaaa 1473526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 1576663 - 1576599
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||| |||||||||||| ||| ||||||||||||| | | | ||||||||||||||||    
T  1576663 atacataaaagtttatttatttgcttaagctgttttgcataagcccaagaataagccaatccaaa 1576599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 1608152 - 1608216
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||| |||||||||||| ||| ||||||||||||| | | | ||||||||||||||||    
T  1608152 atacataaaagtttatttatttgcttaagctgttttgcataagcccaagaataagccaatccaaa 1608216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 459 - 511
Target Start/End: Original strand, 2577481 - 2577533
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||| |||||||| |||| ||  ||||||||||||||||||    
T  2577481 ttatttatttgcataagctgttttggataagctaaaaaataagccaatccaaa 2577533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 12987068 - 12987132
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||||||||||||||||||||  | |||| |||||| ||  |||||||||||||||||    
T  12987068 atacataaaagcttatttatttgcataagttcttttacataatatcagaaataagccaatccaaa 12987132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 13060656 - 13060720
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||||||||||||||||||||  | |||| |||||| ||  |||||||||||||||||    
T  13060656 atacataaaagcttatttatttgcataagttcttttacataatatcagaaataagccaatccaaa 13060720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 5203498 - 5203549
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatcca 509  Q
    ||||||||||||||||| |||||||  |||| ||||||||||||| ||||||    
T  5203498 cttatttatttgcataagctgttttatataagctctaaaataagctaatcca 5203549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 511
Target Start/End: Original strand, 11163320 - 11163387
Alignment:
Q  444 atcatacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||| ||| |||||| |||| ||||| ||||||||||||| ||  |||||||| |||||||||    
T  11163320 atcatacataaaaacttattgatttacataagctgttttgcataagctaaaaaataagtcaatccaaa 11163387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 511
Target Start/End: Original strand, 20458624 - 20458675
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||| |||||||  |||| ||||||||||||| ||||||||    
T  20458624 tatttatttgcataagctgttttatataagctctaaaataagctaatccaaa 20458675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 512
Target Start/End: Original strand, 22573752 - 22573815
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||| ||| ||||||||||||||||  || |||| ||||| ||| |||||||||||||||||||    
T  22573752 acatcaaatcttatttatttgcataccctatttttcataagctcaaaaataagccaatccaaat 22573815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 731 - 821
Target Start/End: Complemental strand, 35300275 - 35300184
Alignment:
Q  731 tgaatcagggaaatgttggtttgattttc-gcaaaggtgacctgaaggaagtcagcgaagaagttgctaaatacaaggtgaagttacctttt 821  Q
    |||| ||||||||||| ||||||||||||  ||| || ||||| ||||| ||||| ||||| ||||| || |||||||| || |||||||||    
T  35300275 tgaaacagggaaatgtgggtttgattttcaccaagggagacctcaaggaggtcagtgaagaggttgccaagtacaaggtaaacttacctttt 35300184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 2878737 - 2878794
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagcc-aatccaaa 511  Q
    ||||||||||||||||||||| |||||| |||||| ||| |||||||||| ||||||||    
T  2878737 aaagcttatttatttgcataagctgtttagcataagctc-aaaataagcctaatccaaa 2878794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 12467381 - 12467443
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||||||||  | |||| ||||| ||  ||||||||||||||||||    
T  12467381 acataaaagcttatttatttgcataagttatttttcataacctaaaaaataagccaatccaaa 12467443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 17868177 - 17868115
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||| |||||||||||||||| || |||| ||||| ||  ||||||||||||||||||    
T  17868177 acataaaaggttatttatttgcataagctattttccataagctaaaaaataagccaatccaaa 17868115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 41125787 - 41125849
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||| |||||||| || || |||| ||||| ||| ||||||||||||||||||    
T  41125787 acataaaagcttatatatttgcaaaagctatttttcataaactcaaaaataagccaatccaaa 41125849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 512
Target Start/End: Original strand, 42558781 - 42558838
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||||||||  ||||| ||||||||||||||| | |||||||| ||||||||||    
T  42558781 aaagcttatttattcacataagctgttttgcataatc-caaaaataagtcaatccaaat 42558838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 6008333 - 6008398
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||| |||| ||||||||||||||||  ||||||  |||| ||||||||||||| |||| ||||    
T  6008333 atacataaaagtttatttatttgcataagttgttttatataaactctaaaataagctaatctaaat 6008398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 524
Target Start/End: Original strand, 7565324 - 7565401
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaataagcctttatgt 524  Q
    |||||| ||||| ||||||||||||| |  |||||||||| | ||||||||||||  |||||||| | ||||| ||||    
T  7565324 atacataaaagcatatttatttgcatcagttgttttgcattagctctaaaataaggtaatccaaacaggccttaatgt 7565401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 295
Target Start/End: Original strand, 9202798 - 9202831
Alignment:
Q  262 aacttatgaaaacagcttattgtttatatgaaaa 295  Q
    |||||||||||||||||||||| |||||||||||    
T  9202798 aacttatgaaaacagcttattgcttatatgaaaa 9202831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 488
Target Start/End: Original strand, 10537273 - 10537314
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataa 488  Q
    |||||| ||||||||||||||||||||| ||||||| |||||    
T  10537273 atacataaaagcttatttatttgcataagctgttttacataa 10537314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 488
Target Start/End: Original strand, 11706972 - 11707013
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataa 488  Q
    |||||| ||||||||||||||||||||  |||||||||||||    
T  11706972 atacataaaagcttatttatttgcataggctgttttgcataa 11707013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 13739301 - 13739244
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||| ||||||| |||||||| |||| ||| |||||||| ||| |||||    
T  13739301 aaagcttatttatatgcataagctgttttgaataagctcaaaaataagtcaacccaaa 13739244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 15709956 - 15710009
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||  ||||||  |||| ||||||||||||| ||||||||    
T  15709956 cttatttatttgcataagttgttttatataagctctaaaataagctaatccaaa 15710009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 463 - 512
Target Start/End: Original strand, 41534755 - 41534804
Alignment:
Q  463 ttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||||| |||||| |||| ||||| ||| |||||||||||||||||||    
T  41534755 ttatttgcgtaaactatttttcataagctcaaaaataagccaatccaaat 41534804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 447 - 516
Target Start/End: Complemental strand, 38372590 - 38372521
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaataagc 516  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||| ||||    
T  38372590 atacataagagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaacaagc 38372521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 455 - 511
Target Start/End: Complemental strand, 18837246 - 18837190
Alignment:
Q  455 aagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||  ||||||||||||| ||| ||||||||||||||||||    
T  18837246 aagcttatttatttgcatatgctgttttgcataagctcaaaaataagccaatccaaa 18837190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 22319345 - 22319409
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||| | ||||||||||||||||||   ||||||||| ||||||||||||||||||||||    
T  22319345 atacattaatgtttatttatttgcataaacctctttgcataaactctaaaataagccaatccaaa 22319409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 24371460 - 24371524
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||| ||||||||||||||||| |||||||  |||| ||||||||||||| ||||||||    
T  24371460 atacattaaaacttatttatttgcataagctgttttatataagctctaaaataagctaatccaaa 24371524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 35809122 - 35809058
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||| ||||||||||||||||||  || |||| |||| ||||||||||||||||||||||    
T  35809122 atacattaatgcttatttatttgcataagatgctttgtataagctctaaaataagccaatccaaa 35809058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 29390524 - 29390462
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||||||||||| |||| ||||| ||| |||||||| |||||||||    
T  29390524 acataaaagcttatttatttgcataaactatttttcataagctcaaaaataagtcaatccaaa 29390462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 40629476 - 40629534
Alignment:
Q  453 taaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||| ||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||    
T  40629476 taaagtttatttatttggataagctgttttgcataagctcaaaaataagccaatccaaa 40629534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 447 - 512
Target Start/End: Complemental strand, 28004616 - 28004551
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||| ||| ||||||||||||||||| |||||||  |||| ||||||||||||| |||||||||    
T  28004616 atacataaaaacttatttatttgcataagctgttttatataagctctaaaataagctaatccaaat 28004551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 29390604 - 29390668
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||| ||||||||||||||||  |||||| ||||| ||| ||||||||||||||||||    
T  29390604 atacatcaaagattatttatttgcataagttgttttccataaactcaaaaataagccaatccaaa 29390668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 454 - 512
Target Start/End: Original strand, 37779339 - 37779396
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||||||||||||||| |||||||| |||| ||  |||||||||||||||||||    
T  37779339 aaagcttatttatttgcataagctgttttgtataagct-aaaaataagccaatccaaat 37779396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 29378763 - 29378820
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||| || |||| ||||| ||| |||||||| |||||||||    
T  29378763 aaagcttatttatttgcataagctatttttcataaactcaaaaataagtcaatccaaa 29378820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 22032794 - 22032730
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| | |||||||||||||||  |||||| ||||| ||||||||||||| ||||||||    
T  22032794 atacataaaaacatatttatttgcataagttgttttacataagctctaaaataagctaatccaaa 22032730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 34922963 - 34922899
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||||||||||||||||||||  |||||||| | | ||  ||||||||||||||||||    
T  34922963 atacataaaagcttatttatttgcataagttgttttgcgttagctgaaaaataagccaatccaaa 34922899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 459 - 511
Target Start/End: Complemental strand, 35331162 - 35331110
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||| ||||||||||||| ||  |||||||| |||||||||    
T  35331162 ttatttatttgcataagctgttttgcataagctacaaaataagtcaatccaaa 35331110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 524
Target Start/End: Complemental strand, 33288048 - 33287973
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaataagcctttatgt 524  Q
    |||| ||| |||||||||||| |||| ||  ||| ||||| ||| |||||||||||||||||| ||||| ||||||    
T  33288048 acataaaaacttatttatttggataagctagttttcataagctcaaaaataagccaatccaaacaagcccttatgt 33287973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 511
Target Start/End: Original strand, 47654481 - 47654532
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||| ||||| |||||||||| || ||||||||||||| ||||||||    
T  47654481 tatttatttacataagctgttttgcaaaagctctaaaataagctaatccaaa 47654532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 447 - 501
Target Start/End: Original strand, 7775342 - 7775396
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataag 501  Q
    |||||| |||||||||||||||||||||| | ||||  |||| ||||||||||||    
T  7775342 atacataaaagcttatttatttgcataaattattttatataaactctaaaataag 7775396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 25908407 - 25908469
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||| ||||||||||||||||| |  |||| ||||| ||| ||||||||||||||||||    
T  25908407 acataaaaacttatttatttgcataagccatttttcataacctcaaaaataagccaatccaaa 25908469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 33204947 - 33205009
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||||||||  | |||| ||||| ||  ||||||||||||||||||    
T  33204947 acataaaagcttatttatttgcataagatatttttcataagctaaaaaataagccaatccaaa 33205009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 34923046 - 34923108
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || ||||  |||| ||| ||||||||||||| ||||    
T  34923046 acataaaagcttatttatttgcataagctattttttataagctcaaaaataagccaattcaaa 34923108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 488
Target Start/End: Original strand, 44613534 - 44613568
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataa 488  Q
    ||||||||||||||||||||| |||||||||||||    
T  44613534 aaagcttatttatttgcataagctgttttgcataa 44613568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 10383585 - 10383638
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||| |||| ||||| ||| |||  |||||||||||||    
T  10383585 cttatttatttgcataaactatttttcataagctcaaaacgaagccaatccaaa 10383638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 483
Target Start/End: Complemental strand, 20888598 - 20888569
Alignment:
Q  454 aaagcttatttatttgcataaactgttttg 483  Q
    ||||||||||||||||||||||||||||||    
T  20888598 aaagcttatttatttgcataaactgttttg 20888569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 26331836 - 26331779
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||| ||||| || |||||||||| ||| || ||||| |||||||||    
T  26331836 aaagcttatttatttacataagctattttgcataagctcaaacataagtcaatccaaa 26331779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 38471847 - 38471915
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaataagcc 517  Q
    |||| ||||| ||||||||||||||| ||||||||||||| ||| ||||||||| |||||||| |||||    
T  38471847 acataaaagcatatttatttgcataagctgttttgcataagctcgaaaataagctaatccaaacaagcc 38471915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 442 - 505
Target Start/End: Complemental strand, 4026963 - 4026900
Alignment:
Q  442 tgatcatacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaa 505  Q
    |||| |||||| ||||||||||||||||||||| | ||||||||||| ||| ||||||||||||    
T  4026963 tgataatacataaaagcttatttatttgcataagcagttttgcataagctcaaaaataagccaa 4026900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 447 - 506
Target Start/End: Complemental strand, 4090521 - 4090462
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaat 506  Q
    |||||| |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  4090521 atacatcaaagtttatttatttgcataagctgttttgcataagctcaaaaataagccaat 4090462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 459 - 511
Target Start/End: Original strand, 2790137 - 2790189
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||| |||||    
T  2790137 ttatttatttgcataagctgttttgcataagctcaaaaataagccaacccaaa 2790189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 459 - 511
Target Start/End: Complemental strand, 38216043 - 38215991
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||| ||||||||||||| ||| |||||||| |||||||||    
T  38216043 ttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaa 38215991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 40301384 - 40301320
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| ||||||||||||||||| |||||||  |||| ||||||||||||| ||||||||    
T  40301384 atacataaaaacttatttatttgcataagctgttttttataagctctaaaataagctaatccaaa 40301320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 447 - 522
Target Start/End: Original strand, 12683660 - 12683735
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaataagcctttat 522  Q
    |||||||||| ||||||||||||||||| ||||||||| | | ||  ||||||||||||| |||| ||||| ||||    
T  12683660 atacattaaaacttatttatttgcataatctgttttgcgtcagcttaaaaataagccaatacaaacaagcccttat 12683735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 449 - 512
Target Start/End: Original strand, 37420019 - 37420082
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||| |||||||||||||||||||||| | |||| ||||| ||  |||||||||||||||||||    
T  37420019 acataaaagcttatttatttgcataaattatttttcataagctaaaaaataagccaatccaaat 37420082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 2757129 - 2757187
Alignment:
Q  453 taaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||| |||||||  |||| |||||||||||| |||||||||    
T  2757129 taaaacttatttatttgcataagctgttttatataagctctaaaataagtcaatccaaa 2757187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 5903651 - 5903713
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| ||| | ||| ||||||||||||||||||    
T  5903651 acataaaagcttatttatttgcataagctatttttcatgagctcaaaaataagccaatccaaa 5903713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 36501488 - 36501426
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| || || ||| ||||||||||||||||||    
T  36501488 acataaaagcttatttatttgcataagctatttttcacaagctcaaaaataagccaatccaaa 36501426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 5903733 - 5903790
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||||||||| || |||| ||| | ||| ||||||||||||||||||    
T  5903733 aaagcttatttatttgcataagctatttttcatgagctcaaaaataagccaatccaaa 5903790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 511
Target Start/End: Original strand, 23956314 - 23956370
Alignment:
Q  455 aagcttatttatttgcataaactgttttgcataatctctaaaataagcc-aatccaaa 511  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||||    
T  23956314 aagcttatttatttgcataagctgttttgcataagct-taaaataagcctaatccaaa 23956370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 512
Target Start/End: Complemental strand, 33321275 - 33321222
Alignment:
Q  459 ttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||||||||||||| || |||| ||||| ||| |||||||||||||||||||    
T  33321275 ttatttatttgcataagctattttacataagctcaaaaataagccaatccaaat 33321222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 488
Target Start/End: Original strand, 34913444 - 34913485
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataa 488  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  34913444 atacataaaagcttatttatttgcataagctgttttgcataa 34913485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 513
Target Start/End: Original strand, 35515547 - 35515600
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaata 513  Q
    ||||||||| | ||||||||||| ||||| ||||||||||||||||| ||||||    
T  35515547 tatttatttacgtaaactgttttacataagctctaaaataagccaattcaaata 35515600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 454 - 512
Target Start/End: Original strand, 27709729 - 27709784
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    ||||||||||||||||||||| |||| ||||||||||||   || ||||||||||||||    
T  27709729 aaagcttatttatttgcataagctgtcttgcataatctc---aacaagccaatccaaat 27709784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 511
Target Start/End: Original strand, 2401688 - 2401739
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||||| |||||||  |||| ||||||||||||| ||||||||    
T  2401688 tatttatttgcataagctgttttatataagctctaaaataagctaatccaaa 2401739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 497
Target Start/End: Original strand, 27703519 - 27703562
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaa 497  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||    
T  27703519 aaagcttatttatttgcataagctgttttgcataagctcaaaaa 27703562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 574 - 612
Target Start/End: Complemental strand, 6561282 - 6561244
Alignment:
Q  574 gctataaacacttaatttagttgtttatccaaatagggt 612  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  6561282 gctataaacactgaattcagttgtttatccaaatagggt 6561244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 8832570 - 8832632
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| ||||| ||  |||||||| |||||||||    
T  8832570 acataaaagcttatttatttgcataagctatttttcataagctaaaaaataagtcaatccaaa 8832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 13056300 - 13056238
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||| |||||| ||||||| ||||  |||| ||| | ||||||||||||||||    
T  13056300 acattaaagcttatctatttgtataaactatttttgataagctcaacaataagccaatccaaa 13056238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 458 - 488
Target Start/End: Original strand, 17797332 - 17797362
Alignment:
Q  458 cttatttatttgcataaactgttttgcataa 488  Q
    |||||||||||||||||||||||||||||||    
T  17797332 cttatttatttgcataaactgttttgcataa 17797362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 21788482 - 21788425
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagc-caatccaaa 511  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||||||| |||||||||    
T  21788482 aaagcttatttatttgcataagatgttttgcataaactc-aaaataagctcaatccaaa 21788425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 460 - 502
Target Start/End: Original strand, 27881064 - 27881106
Alignment:
Q  460 tatttatttgcataaactgttttgcataatctctaaaataagc 502  Q
    ||||||||||||||| || |||||||||| |||||||||||||    
T  27881064 tatttatttgcataagctattttgcataagctctaaaataagc 27881106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 503
Target Start/End: Complemental strand, 1768791 - 1768747
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagcc 503  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  1768791 cttatttatttgcataagctgttttgcataaactc-aaaataagcc 1768747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 12442920 - 12442977
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||| ||||||| ||||||| ||||| ||| ||| ||||| ||||||||    
T  12442920 aaagcttatttatctgcataagctgtttttcataagctcaaaattaagctaatccaaa 12442977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 470 - 511
Target Start/End: Complemental strand, 13097925 - 13097884
Alignment:
Q  470 cataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||    
T  13097925 cataagctgttttgcataagctcaaaaataagccaatccaaa 13097884  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 500
Target Start/End: Original strand, 16108517 - 16108570
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataa 500  Q
    ||||||||| ||||||||||||||||||  || ||| ||||| |||||||||||    
T  16108517 atacattaatgcttatttatttgcataagttgctttacataaactctaaaataa 16108570  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 22422233 - 22422286
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||||||||||||||||| |||   |||| ||||||||||||| ||||||||    
T  22422233 cttatttatttgcataaactctttcatataaactctaaaataagctaatccaaa 22422286  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 24777 - 24714
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||||||||||||||||||||| ||||||||| ||| || |||||||| ||||||||||    
T  24777 atacataaaagcttatttatttgcataagctgttttgcttaagctataaaataa-ccaatccaaa 24714  T

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Target: scaffold0157; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 386 - 442
Target Start/End: Complemental strand, 24853 - 24796
Alignment:
Q  386 ataagttcccactaatgaattttttatctc-attagctgttttttcataagctacctt 442  Q
    |||||||| ||||||||||| || |||||  ||||||||||||||||||| |||||||    
T  24853 ataagttctcactaatgaatattgtatcttgattagctgttttttcataaactacctt 24796  T

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Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 3211055 - 3211119
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||||||||||||||||||||| |||||||||| || ||  |||||||||| |||||||    
T  3211055 atacataaaagcttatttatttgcataagctgttttgcacaagctaaaaaataagccgatccaaa 3211119  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 6632691 - 6632627
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||||| |||||||||||||||  ||||||| |||| ||||||||||||| ||||||||    
T  6632691 atacataaaagcatatttatttgcataagttgttttgaataagctctaaaataagctaatccaaa 6632627  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 10755256 - 10755194
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||||||||||| |||| || || ||| |||||||| |||||||||    
T  10755256 acataaaagcttatttatttgcataaactatttttcagaagctcaaaaataagtcaatccaaa 10755194  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 10874011 - 10873953
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctc-taaaataagccaatccaaa 511  Q
    ||||||||||||| ||||||| || ||||||||||||||  ||||||||||||||||||    
T  10874011 aaagcttatttatatgcataagctattttgcataatctcaaaaaataagccaatccaaa 10873953  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 12816874 - 12816812
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||||||||||| |||| ||||| ||| ||||||||  ||||||||    
T  12816874 acataaaagcttatttatttgcataaactatttttcataagctcaaaaataagttaatccaaa 12816812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 35071401 - 35071339
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| ||||||||||||||||||||| || |||| ||||| ||  ||||||||||||||||||    
T  35071401 acataaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatccaaa 35071339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 35111396 - 35111453
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||| ||||||||||||| ||||||||||||| ||  ||||| ||||||||||||    
T  35111396 aaagcttgtttatttgcataagctgttttgcataagcttaaaaattagccaatccaaa 35111453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 4808604 - 4808540
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| || |||||||||||||| |||||||  |||| ||||||||||||| ||||||||    
T  4808604 atacatgaaaactcatttatttgcataagctgttttatataagctctaaaataagctaatccaaa 4808540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 9894798 - 9894734
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| |||| |||||||||||| ||| |||||||| |||| ||| ||||||||| ||||||||    
T  9894798 atacataaaagattatttatttgcgtaagctgttttgtataagctcgaaaataagctaatccaaa 9894734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 499
Target Start/End: Complemental strand, 10687339 - 10687287
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaata 499  Q
    |||||| ||||||||||||||||||||| |||||||| |||| ||| ||||||    
T  10687339 atacatcaaagcttatttatttgcataagctgttttgaataagctcaaaaata 10687287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 25430817 - 25430881
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| || ||||||||||||| |||| ||||||| ||||| ||| |||||||| |||||||||    
T  25430817 atacataaatgcttatttatttgtataagctgttttacataagctcaaaaataagtcaatccaaa 25430881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 503
Target Start/End: Complemental strand, 30534012 - 30533957
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagcc 503  Q
    |||||| ||||||||||||||||||||| |||||||||| || ||| ||||||||||    
T  30534012 atacataaaagcttatttatttgcataagctgttttgcacaagctc-aaaataagcc 30533957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 7267895 - 7267957
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||| |||||||||||||||||||||  |||| | ||||| ||  ||||||||||||||||||    
T  7267895 acataaaagcttatttatttgcataagttgttattcataagcttaaaaataagccaatccaaa 7267957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 454 - 512
Target Start/End: Complemental strand, 8014813 - 8014756
Alignment:
Q  454 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaat 512  Q
    |||||||| |||||||||||| |||||||  |||| ||| |||||||||||||||||||    
T  8014813 aaagcttacttatttgcataagctgttttctataaactc-aaaataagccaatccaaat 8014756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 449 - 507
Target Start/End: Original strand, 10687423 - 10687480
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatc 507  Q
    |||| |||||||||||||||||||||||| |||| ||||| ||  ||||||||||||||    
T  10687423 acataaaagcttatttatttgcataaactatttt-cataagctaaaaaataagccaatc 10687480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 7485110 - 7485167
Alignment:
Q  254 tttgagagaacttatgaaaacagcttattgtttatatgaaaaaagtcttactttattt 311  Q
    ||||||||| |||||||||||| ||||| | ||||||||||||| | | |||||||||    
T  7485110 tttgagagagcttatgaaaacaacttatagcttatatgaaaaaaatttaactttattt 7485167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 10184394 - 10184447
Alignment:
Q  458 cttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||| ||||| |||||||  |||| ||||||||||||| ||||||||    
T  10184394 cttatttatttacataagctgttttatataagctctaaaataagctaatccaaa 10184447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 511
Target Start/End: Complemental strand, 11795577 - 11795528
Alignment:
Q  462 tttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    ||||||||||||| ||||||||||||| |||  ||||||| |||||||||    
T  11795577 tttatttgcataatctgttttgcataagctcagaaataagtcaatccaaa 11795528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 449 - 502
Target Start/End: Complemental strand, 22816558 - 22816506
Alignment:
Q  449 acattaaagcttatttatttgcataaactgttttgcataatctctaaaataagc 502  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||| |||||||||    
T  22816558 acataaaaacttatttatttgcataaactgttttgcttaagctc-aaaataagc 22816506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 38506 - 38570
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| |||||||||||||||||||| ||||  |||| || |||||||||| ||||||||    
T  38506 atacataaaaacttatttatttgcataaactattttatataaactttaaaataagctaatccaaa 38570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 242693 - 242757
Alignment:
Q  447 atacattaaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaa 511  Q
    |||||| ||| |||||||||||||||||||| ||||  |||| || |||||||||| ||||||||    
T  242693 atacataaaaacttatttatttgcataaactattttatataagctataaaataagctaatccaaa 242757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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