View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4630-Insertion-8 (Length: 945)

Name: NF4630-Insertion-8
Description: NF4630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4630-Insertion-8
NF4630-Insertion-8
[»] chr4 (13 HSPs)
chr4 (8-902)||(27811676-27812584)
chr4 (581-759)||(49526400-49526576)
chr4 (625-786)||(50687533-50687690)
chr4 (626-753)||(10267252-10267374)
chr4 (626-761)||(31079744-31079875)
chr4 (608-761)||(1658608-1658756)
chr4 (594-784)||(3077894-3078080)
chr4 (575-684)||(12460694-12460801)
chr4 (643-753)||(18567006-18567111)
chr4 (631-784)||(14022415-14022564)
chr4 (599-793)||(22271822-22272014)
chr4 (718-784)||(18108689-18108755)
chr4 (718-784)||(13277290-13277356)
[»] chr3 (29 HSPs)
chr3 (563-865)||(14133221-14133518)
chr3 (583-800)||(1934586-1934791)
chr3 (625-761)||(132432-132564)
chr3 (626-753)||(43135564-43135687)
chr3 (625-786)||(13101823-13101979)
chr3 (375-466)||(1934415-1934506)
chr3 (580-783)||(12844504-12844704)
chr3 (583-786)||(14345512-14345711)
chr3 (598-834)||(13905855-13906089)
chr3 (386-465)||(14148014-14148093)
chr3 (384-466)||(132197-132280)
chr3 (575-693)||(6037627-6037744)
chr3 (563-693)||(14000798-14000929)
chr3 (705-786)||(55002420-55002500)
chr3 (646-784)||(10139760-10139895)
chr3 (642-691)||(13023962-13024011)
chr3 (646-781)||(10171130-10171262)
chr3 (718-784)||(13299533-13299599)
chr3 (718-784)||(13310191-13310257)
chr3 (718-784)||(14683217-14683283)
chr3 (417-458)||(6036130-6036171)
chr3 (405-449)||(14133932-14133976)
chr3 (589-684)||(22445017-22445113)
chr3 (580-694)||(12021408-12021523)
chr3 (717-784)||(12021543-12021610)
chr3 (661-784)||(12491916-12492036)
chr3 (717-784)||(13023873-13023940)
chr3 (725-793)||(6037772-6037837)
chr3 (744-793)||(10832437-10832486)
[»] chr2 (50 HSPs)
chr2 (554-865)||(20524054-20524353)
chr2 (563-831)||(20442165-20442430)
chr2 (583-833)||(30051841-30052089)
chr2 (583-833)||(30142885-30143133)
chr2 (583-808)||(30089856-30090078)
chr2 (583-808)||(30126461-30126683)
chr2 (561-831)||(20281066-20281333)
chr2 (554-808)||(23995578-23995821)
chr2 (573-754)||(10480329-10480507)
chr2 (625-786)||(21904954-21905111)
chr2 (626-783)||(34827608-34827761)
chr2 (626-754)||(22593770-22593894)
chr2 (626-759)||(25349258-25349387)
chr2 (626-784)||(37130400-37130555)
chr2 (625-742)||(23769365-23769478)
chr2 (589-784)||(16664625-16664817)
chr2 (589-784)||(22880943-22881135)
chr2 (642-761)||(23814991-23815107)
chr2 (642-753)||(28567719-28567825)
chr2 (589-784)||(31817914-31818106)
chr2 (624-753)||(21256456-21256574)
chr2 (642-760)||(23803361-23803476)
chr2 (374-466)||(34827357-34827450)
chr2 (583-693)||(30244055-30244167)
chr2 (642-693)||(23829839-23829890)
chr2 (575-684)||(27157187-27157294)
chr2 (661-784)||(23870538-23870657)
chr2 (575-659)||(22271152-22271233)
chr2 (375-466)||(20524440-20524530)
chr2 (375-466)||(23995403-23995494)
chr2 (375-466)||(30051638-30051729)
chr2 (375-466)||(30089653-30089744)
chr2 (375-466)||(30142682-30142773)
chr2 (375-466)||(30243852-30243943)
chr2 (374-466)||(21256205-21256299)
chr2 (741-791)||(22272658-22272708)
chr2 (654-784)||(22648572-22648699)
chr2 (718-784)||(23615183-23615249)
chr2 (718-784)||(24896632-24896698)
chr2 (718-784)||(24967528-24967594)
chr2 (718-784)||(39227522-39227588)
chr2 (383-466)||(23769126-23769207)
chr2 (661-753)||(22708199-22708287)
chr2 (661-784)||(23190269-23190389)
chr2 (661-784)||(23611524-23611644)
chr2 (405-466)||(20280912-20280974)
chr2 (375-450)||(23203566-23203642)
chr2 (718-784)||(23203939-23204005)
chr2 (708-763)||(25118979-25119036)
chr2 (402-466)||(22593997-22594062)
[»] chr7 (23 HSPs)
chr7 (554-859)||(16713182-16713483)
chr7 (554-859)||(17687418-17687719)
chr7 (561-804)||(41239140-41239378)
chr7 (561-786)||(18450778-18450999)
chr7 (625-753)||(40342834-40342958)
chr7 (625-786)||(10478172-10478328)
chr7 (626-761)||(10827778-10827909)
chr7 (626-761)||(11021570-11021701)
chr7 (594-689)||(18752739-18752835)
chr7 (375-466)||(40342582-40342674)
chr7 (626-693)||(10864198-10864265)
chr7 (654-784)||(18174872-18174999)
chr7 (675-760)||(24876397-24876478)
chr7 (666-784)||(11989418-11989533)
chr7 (400-466)||(10864427-10864494)
chr7 (654-784)||(44277677-44277804)
chr7 (419-466)||(10827567-10827615)
chr7 (419-466)||(11021359-11021407)
chr7 (599-675)||(16191501-16191575)
chr7 (718-784)||(15758558-15758624)
chr7 (718-784)||(18115295-18115360)
chr7 (718-784)||(18141863-18141928)
chr7 (599-684)||(18378917-18379001)
[»] chr8 (30 HSPs)
chr8 (554-872)||(16777858-16778155)
chr8 (625-786)||(15911710-15911867)
chr8 (575-792)||(24974226-24974440)
chr8 (575-793)||(23237179-23237393)
chr8 (579-693)||(27818276-27818391)
chr8 (594-784)||(18735370-18735556)
chr8 (642-784)||(22698098-22698236)
chr8 (554-728)||(17637779-17637949)
chr8 (626-751)||(15337344-15337465)
chr8 (626-751)||(15426409-15426530)
chr8 (626-751)||(15517713-15517834)
chr8 (625-786)||(22698712-22698868)
chr8 (375-459)||(24974056-24974142)
chr8 (589-784)||(29708112-29708304)
chr8 (589-784)||(41438790-41438982)
chr8 (654-784)||(17426107-17426234)
chr8 (646-784)||(22352016-22352151)
chr8 (646-784)||(25388985-25389120)
chr8 (374-466)||(17637604-17637696)
chr8 (597-787)||(13764466-13764655)
chr8 (419-466)||(17839812-17839859)
chr8 (654-784)||(20193165-20193292)
chr8 (375-466)||(15911983-15912075)
chr8 (375-447)||(16778259-16778330)
chr8 (405-460)||(18735697-18735753)
chr8 (725-784)||(22064586-22064645)
chr8 (718-784)||(16668026-16668092)
chr8 (405-462)||(22697865-22697923)
chr8 (633-747)||(18846786-18846895)
chr8 (386-466)||(18847026-18847107)
[»] chr1 (26 HSPs)
chr1 (554-831)||(21550474-21550748)
chr1 (629-753)||(4361626-4361746)
chr1 (626-784)||(21168326-21168479)
chr1 (626-784)||(27902018-27902172)
chr1 (626-759)||(2603465-2603594)
chr1 (579-783)||(16406709-16406910)
chr1 (589-784)||(23511609-23511801)
chr1 (626-753)||(27131736-27131859)
chr1 (642-784)||(4229856-4229994)
chr1 (589-784)||(21076559-21076751)
chr1 (575-693)||(22508930-22509046)
chr1 (594-784)||(50826378-50826564)
chr1 (631-784)||(21137654-21137803)
chr1 (626-759)||(21382026-21382155)
chr1 (631-784)||(31845645-31845795)
chr1 (579-784)||(21310728-21310931)
chr1 (646-784)||(29305217-29305352)
chr1 (725-784)||(22086398-22086457)
chr1 (405-462)||(21168097-21168155)
chr1 (646-784)||(22809065-22809200)
chr1 (707-752)||(18530577-18530622)
chr1 (403-462)||(18530859-18530918)
chr1 (712-776)||(22509060-22509126)
chr1 (718-784)||(1528720-1528786)
chr1 (405-466)||(16406536-16406598)
chr1 (421-462)||(41368404-41368446)
[»] chr5 (20 HSPs)
chr5 (375-674)||(26835986-26836284)
chr5 (554-872)||(20249155-20249451)
chr5 (575-834)||(17432587-17432844)
chr5 (629-751)||(16832141-16832259)
chr5 (594-784)||(20024401-20024587)
chr5 (626-753)||(18156174-18156297)
chr5 (577-782)||(19212377-19212578)
chr5 (626-784)||(40932878-40933032)
chr5 (625-786)||(19859560-19859716)
chr5 (642-761)||(10624328-10624442)
chr5 (375-465)||(20248977-20249067)
chr5 (646-784)||(21530303-21530438)
chr5 (710-810)||(26855570-26855669)
chr5 (405-466)||(18156458-18156520)
chr5 (646-784)||(26274096-26274231)
chr5 (718-783)||(21982681-21982746)
chr5 (718-784)||(20506387-20506453)
chr5 (746-784)||(21390786-21390824)
chr5 (718-784)||(21504636-21504702)
chr5 (374-466)||(19212686-19212779)
[»] scaffold0093 (1 HSPs)
scaffold0093 (405-693)||(43433-43720)
[»] scaffold0035 (2 HSPs)
scaffold0035 (554-832)||(25662-25937)
scaffold0035 (374-466)||(25483-25575)
[»] scaffold0297 (1 HSPs)
scaffold0297 (573-786)||(8709-8919)
[»] scaffold1496 (1 HSPs)
scaffold1496 (554-831)||(1348-1621)
[»] scaffold0239 (3 HSPs)
scaffold0239 (555-832)||(5492-5757)
scaffold0239 (580-694)||(16928-17043)
scaffold0239 (553-734)||(1-169)
[»] scaffold0126 (2 HSPs)
scaffold0126 (578-828)||(31158-31404)
scaffold0126 (419-466)||(28838-28885)
[»] scaffold0504 (2 HSPs)
scaffold0504 (561-832)||(539-812)
scaffold0504 (419-466)||(399-447)
[»] scaffold0168 (2 HSPs)
scaffold0168 (626-784)||(1387-1541)
scaffold0168 (375-466)||(1137-1229)
[»] scaffold0063 (2 HSPs)
scaffold0063 (626-784)||(70634-70788)
scaffold0063 (407-460)||(70959-71013)
[»] chr6 (20 HSPs)
chr6 (626-787)||(26460569-26460726)
chr6 (624-787)||(19272293-19272451)
chr6 (626-784)||(11794100-11794254)
chr6 (626-760)||(18258088-18258218)
chr6 (626-749)||(16597229-16597348)
chr6 (654-784)||(23496547-23496674)
chr6 (654-784)||(23490949-23491076)
chr6 (374-466)||(16596975-16597068)
chr6 (580-659)||(19084718-19084798)
chr6 (707-787)||(20440728-20440808)
chr6 (661-784)||(19405800-19405920)
chr6 (646-784)||(19025389-19025524)
chr6 (718-784)||(23431909-23431975)
chr6 (718-784)||(30755597-30755663)
chr6 (707-784)||(20434376-20434453)
chr6 (707-787)||(20438105-20438185)
chr6 (400-466)||(19272069-19272136)
chr6 (718-784)||(1557751-1557817)
chr6 (718-784)||(16209792-16209858)
chr6 (718-784)||(19038501-19038567)
[»] scaffold0029 (2 HSPs)
scaffold0029 (625-784)||(101986-102140)
scaffold0029 (402-460)||(101790-101849)
[»] scaffold0151 (2 HSPs)
scaffold0151 (642-784)||(14143-14280)
scaffold0151 (375-462)||(13862-13950)
[»] scaffold0770 (2 HSPs)
scaffold0770 (625-784)||(3682-3836)
scaffold0770 (402-460)||(3486-3545)
[»] scaffold0100 (2 HSPs)
scaffold0100 (594-752)||(9012-9166)
scaffold0100 (405-460)||(9304-9360)
[»] scaffold0077 (2 HSPs)
scaffold0077 (626-753)||(12351-12474)
scaffold0077 (375-466)||(12631-12723)
[»] scaffold0417 (1 HSPs)
scaffold0417 (625-749)||(1330-1450)
[»] scaffold0012 (1 HSPs)
scaffold0012 (624-784)||(250062-250218)
[»] scaffold0190 (2 HSPs)
scaffold0190 (642-761)||(7441-7556)
scaffold0190 (400-466)||(7741-7808)
[»] scaffold0480 (2 HSPs)
scaffold0480 (642-759)||(3716-3828)
scaffold0480 (375-463)||(4011-4100)
[»] scaffold0053 (1 HSPs)
scaffold0053 (589-784)||(45177-45370)
[»] scaffold0013 (2 HSPs)
scaffold0013 (589-784)||(129157-129349)
scaffold0013 (589-693)||(107500-107605)
[»] scaffold0003 (1 HSPs)
scaffold0003 (589-784)||(33282-33474)
[»] scaffold0016 (1 HSPs)
scaffold0016 (594-784)||(200117-200303)
[»] scaffold0001 (5 HSPs)
scaffold0001 (631-783)||(390078-390227)
scaffold0001 (375-450)||(115055-115131)
scaffold0001 (718-784)||(25159-25225)
scaffold0001 (718-784)||(28657-28723)
scaffold0001 (718-784)||(115416-115482)
[»] scaffold0059 (2 HSPs)
scaffold0059 (589-784)||(68052-68244)
scaffold0059 (589-784)||(76157-76349)
[»] scaffold0171 (1 HSPs)
scaffold0171 (625-748)||(26909-27027)
[»] scaffold0101 (2 HSPs)
scaffold0101 (654-784)||(50915-51042)
scaffold0101 (718-784)||(46338-46404)
[»] scaffold0019 (1 HSPs)
scaffold0019 (646-784)||(151402-151537)
[»] scaffold0023 (7 HSPs)
scaffold0023 (589-692)||(116490-116594)
scaffold0023 (646-784)||(6658-6793)
scaffold0023 (718-784)||(62140-62206)
scaffold0023 (718-784)||(71318-71384)
scaffold0023 (646-784)||(85001-85136)
scaffold0023 (413-462)||(62477-62527)
scaffold0023 (413-462)||(71655-71705)
[»] scaffold0740 (1 HSPs)
scaffold0740 (718-784)||(5627-5693)
[»] scaffold0423 (1 HSPs)
scaffold0423 (718-784)||(1727-1793)
[»] scaffold0241 (1 HSPs)
scaffold0241 (718-784)||(25076-25142)
[»] scaffold0108 (2 HSPs)
scaffold0108 (646-784)||(23022-23157)
scaffold0108 (718-784)||(44198-44264)
[»] scaffold0046 (1 HSPs)
scaffold0046 (646-784)||(30585-30720)
[»] scaffold0096 (2 HSPs)
scaffold0096 (646-693)||(36407-36454)
scaffold0096 (400-462)||(36653-36716)
[»] scaffold0282 (1 HSPs)
scaffold0282 (646-784)||(8760-8895)
[»] scaffold0130 (2 HSPs)
scaffold0130 (718-784)||(29411-29477)
scaffold0130 (718-784)||(39854-39920)
[»] scaffold0081 (1 HSPs)
scaffold0081 (646-784)||(44262-44397)
[»] scaffold0060 (1 HSPs)
scaffold0060 (718-784)||(32071-32137)
[»] scaffold0026 (2 HSPs)
scaffold0026 (718-784)||(118437-118503)
scaffold0026 (661-784)||(142233-142353)
[»] scaffold0022 (1 HSPs)
scaffold0022 (646-784)||(58496-58631)
[»] scaffold0756 (1 HSPs)
scaffold0756 (413-466)||(4820-4873)
[»] scaffold0757 (1 HSPs)
scaffold0757 (431-466)||(374-409)
[»] scaffold0304 (1 HSPs)
scaffold0304 (725-784)||(5857-5916)
[»] scaffold0216 (1 HSPs)
scaffold0216 (725-784)||(20048-20107)
[»] scaffold0516 (1 HSPs)
scaffold0516 (654-696)||(11282-11324)
[»] scaffold0270 (2 HSPs)
scaffold0270 (718-784)||(8149-8215)
scaffold0270 (718-784)||(15279-15345)
[»] scaffold0107 (1 HSPs)
scaffold0107 (654-696)||(32199-32241)
[»] scaffold0064 (1 HSPs)
scaffold0064 (718-784)||(43189-43255)
[»] scaffold0323 (1 HSPs)
scaffold0323 (419-459)||(4853-4894)


Alignment Details
Target: chr4 (Bit Score: 601; Significance: 0; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 601; E-Value: 0
Query Start/End: Original strand, 8 - 902
Target Start/End: Original strand, 27811676 - 27812584
Alignment:
Q  8 ctgggtggcttggaataatgaggatgttttcccccaacctaaatacttaaccataaatataattgcttagatattaggaaattatgcatccnnnnnnnga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  27811676 ctgggtggcttggaataatgaggatgttttcccccaacctaaatacttaaccataaatataattgcttagatattaggaaattatgcatccaaaaaagga 27811775  T
Q  108 ggaaattatcaatcaaattttaaaaaatatcaatagtaaattttttgtatgtcgatctttataaattatcgttgatcagctgtttaataagtatatgtan 207  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||     
T  27811776 ggaaattatcaatcaaattt-aaaaaatatcaatagtaaattttttgtatgtcgatctttataaattatcattgatcagttgtttaataagtatatgtat 27811874  T
Q  208 nnnnnnagagtttaatattatagactataagtgtaattaagtttttcacattcatcaaattacatcttattatttagatattaatttttgaaaatattat 307  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27811875 ttttttagagtttaatattatagactataagtgtaattaagtttttcacattcatcaaattacatcttattatttagatattaatttttgaaaatattat 27811974  T
Q  308 aggaactattataataaagtgatgtaaaagtgaac-aaaaaagtgatg---taataataaaacaagagtagtgtttaccttgattttcggtgaaccaccg 403  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||   |||||||||||||||||||||||||| ||||||||||||| |||||| |    
T  27811975 aggaactattataataaagtgatgtaatagtgaacaaaaaaagtgatgtaataataataaaacaagagtagtgtttatcttgattttcggtaaaccactg 27812074  T
Q  404 ttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgttannnnnnnagaaaatgatgaannnnnnngatattttag 503  Q
    ||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||       ||||||| | |||       ||||||||||    
T  27812075 ttgatttataaatgattacttgtaagatcaaccaataaattttaggatatattgtgtttgttatttttttagaaaataaagaatgttcttgatattttag 27812174  T
Q  504 tgtaggattatgaatataatcatcgaatccnnnnnnnnttgaattctgctgagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaa 603  Q
    || || ||||||||||||| | | ||||||        ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27812175 tgcagaattatgaatataaccgttgaatccaacaaaaattgaattctgccgagattatcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaa 27812274  T
Q  604 ttgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac----------tcgttt 693  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||          | ||||    
T  27812275 ttgcaaggaatttaaaggaataaacttaaattgcataaattgaatgtaaattggtagacatattcatacattgcaacttgtgacttgtttgtttttgttt 27812374  T
Q  694 gcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatactaagtaact 793  Q
    | |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  27812375 gtttctctctgaaatgcggataatttgagtgtaagttttctgtatgattgaattgtgacccgtttttcatgtgaaaaactattatttatactaagcaact 27812474  T
Q  794 atctacaaagaaacgttt-aacgtaactgctaataactacccaagatacatcttaattaaatttcaactaagatccttcgtccgtaatcgttgcgtgtct 892  Q
    | ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  27812475 acctacacagaaacgtttgaacgtaactgctaataactacccaagatacatcttaattaaatttcaactaagatccttcgtcggtaatcgttgcgtgact 27812574  T
Q  893 ccttcatccg 902  Q
    ||||||||||    
T  27812575 ccttcatccg 27812584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 581 - 759
Target Start/End: Original strand, 49526400 - 49526576
Alignment:
Q  581 attgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaa 679  Q
    |||||||||||| |||||||||||||||| || | ||||   |  |||||||||||||||  |||||||||||||||||| |||| ||||||||||||||    
T  49526400 attgcttgaaataaacaagtaaattgcaaagacaattaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaa 49526499  T
Q  680 cttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttt 759  Q
    ||||||||||||||   ||||| || |||||||||||||||| | |||||||| |||||||||| ||||| |||| ||||    
T  49526500 cttgtgactcgttt--ctctctttg-aatgcggatagtttgattgtaagttttgtgtatgattggattgtcacccttttt 49526576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 625 - 786
Target Start/End: Complemental strand, 50687690 - 50687533
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    |||||||||||||||  |||||||||||||||||| |||| ||||||||||  |||||||||||||||||    |||||  |||||||||||  |||||     
T  50687690 aaacttaaattgcatttattgaatgtaaattggtacacatgttcatacattataacttgtgactcgtttg----tctcttgaatgcggatagcctgagtg 50687595  T
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatacta 786  Q
    |||||||| ||||||||||  ||||||||| |||||| | ||||||| ||||||||||||||    
T  50687594 taagttttgtgtatgattggtttgtgacccgtttttcctatgaaaaaatattatttatacta 50687533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 626 - 753
Target Start/End: Complemental strand, 10267374 - 10267252
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    |||||||| |||||  |||||||||||||||||| |||| ||||||||||||||||||||| ||||    ||||||||   ||||||||| ||||||| |    
T  10267374 aacttaaagtgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgattcgt----ttctctcttccatgcggataatttgagtgt 10267279  T
Q  726 aagttttctgtatgattgaattgtgacc 753  Q
    ||||||| |||||||||||||| |||||    
T  10267278 aagtttt-tgtatgattgaattttgacc 10267252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 626 - 761
Target Start/End: Original strand, 31079744 - 31079875
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  || |||| || ||||||| |||| |||| ||||||||| |||||||||||||    ||||||   ||||||||| ||||||| |    
T  31079744 aacttaaattgcattgatcgaatatagattggtacacatgttcacacattgcaatttgtgactcgttt----ctctcttccatgcggataatttgagtgt 31079839  T
Q  726 aagttttctgtatgattgaattgtgacccatttttc 761  Q
    ||||||| ||||||||||||||||||||| ||||||    
T  31079840 aagttttttgtatgattgaattgtgacccctttttc 31079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 608 - 761
Target Start/End: Complemental strand, 1658756 - 1658608
Alignment:
Q  608 aagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaa 707  Q
    |||| |||||||| | | ||||| ||||| ||  ||||||||||| |||||| |||| ||||||||||||||||||||||||||    ||||||||   |    
T  1658756 aagacatttaaagaaatgaacttgaattgtattgattgaatgtaagttggtacacatattcatacattgcaacttgtgactcgt----ttctctcttcca 1658661  T
Q  708 tgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttc 761  Q
    |||||||| ||||||| |||||||| |||||||| |||||||||| | ||||||    
T  1658660 tgcggataatttgagtgtaagtttt-tgtatgatagaattgtgacacttttttc 1658608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 784
Target Start/End: Original strand, 3077894 - 3078080
Alignment:
Q  594 aacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtt 692  Q
    |||||||||||||||| || |||||||| | | ||||||||||||||  ||||||||||| |||||| |||  |||||||||| ||||||||| |||||     
T  3077894 aacaagtaaattgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttggtacacagattcatacattacaacttgtggctcgt- 3077992  T
Q  693 tgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
       ||||  ||   || |||||| ||||||  |||||||| ||||||||||||||||||||  |||||  |  ||||||||| |||||||||    
T  3077993 ---ttcttgcttccatacggataatttgagcttaagtttt-tgtatgattgaattgtgaccttttttttctaagaaaaactactatttatac 3078080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 575 - 684
Target Start/End: Original strand, 12460694 - 12460801
Alignment:
Q  575 aagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcataca- 673  Q
    |||||||||||| ||||  || |||| ||||||||| |||||||| ||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||     
T  12460694 aagtaaattgctagaaaa-aagaagtgaattgcaaggaatttaaatgat-aaacttaaattgcataaat-gaatgtaaattggtacacatattcatacat 12460790  T
Q  674 ttgcaacttgt 684  Q
    |||||||||||    
T  12460791 ttgcaacttgt 12460801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 643 - 753
Target Start/End: Original strand, 18567006 - 18567111
Alignment:
Q  643 ttgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgatt 742  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||||    ||||||||   |||||| || ||||||| |||||||| ||||||||     
T  18567006 ttgaatgtaaattggtacacatattcattcattgcaacttgtgactcgt----ttctctcttccatgcgggtaatttgagtgtaagtttt-tgtatgata 18567100  T
Q  743 gaattgtgacc 753  Q
    |||||||||||    
T  18567101 gaattgtgacc 18567111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 631 - 784
Target Start/End: Original strand, 14022415 - 14022564
Alignment:
Q  631 aaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgt---ttgcttctctctgaaatgcggatagtttgagtataa 727  Q
    |||||||||  ||||||||||| || ||| |||| ||||||||||||||||||||||||||   ||||||||       || |||| | ||||||| |||    
T  14022415 aaattgcattgattgaatgtaagttagtacacatattcatacattgcaacttgtgactcgtcagttgcttct-------atacggacaatttgagtgtaa 14022507  T
Q  728 gttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||  |||||||||||||||||||| |||||| |   |||||||| |||||||||    
T  14022508 gtttttagtatgattgaattgtgacccttttttcctaaaaaaaactactatttatac 14022564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 599 - 793
Target Start/End: Original strand, 22271822 - 22272014
Alignment:
Q  599 gtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacatt-gcaacttgtg-actcgtttgct 696  Q
    ||||||||||||||||||||||||  ||  |||||||||||||||  |||||||| ||||| | || |||||||||| |||||||||  ||||||||       
T  22271822 gtaaattgcaagaaatttaaaggaa-aaggttaaattgcataaata-aatgtaaagtggtacatatattcatacatttgcaacttgtttactcgttt--- 22271916  T
Q  697 tctctctgaaatgcggatagtttga---gtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatactaagtaact 793  Q
     ||| ||  | ||||||||||||||   || |||||||| ||| |   ||||||||||||| |||||| | ||||||||| |||||||||||||||||||    
T  22271917 -ctc-ctatagtgcggatagtttgaagtgtgtaagttttatgtgtatgtgaattgtgacccgtttttcctatgaaaaactcttatttatactaagtaact 22272014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 18108755 - 18108689
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  18108755 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 18108689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 13277290 - 13277356
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||  |||||| |  ||||||||| |||||||||    
T  13277290 ttgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 13277356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 1e-74; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 563 - 865
Target Start/End: Complemental strand, 14133518 - 14133221
Alignment:
Q  563 ttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagac 662  Q
    ||||||||||||| |||||  |||||| |   |||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||| ||||||| |     
T  14133518 ttcaaaggattaacgtaaaaagcttgataaatacaagtaaattgcaaggaatttaaaggaatgaacttaaatttcataaattgaatgtatattggtacat 14133419  T
Q  663 attttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttca 762  Q
    |  |||||||||||  |||||| ||||||    ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| | ||||||     
T  14133418 agattcatacattgtgacttgttactcgt----ttctctctg-aatgcggatagtttgagtataagtttt-tttatgattgaattgtgactcgtttttct 14133325  T
Q  763 tgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataactacccaagatacatcttaattaaatttcaact 861  Q
    | |||||||||||||||||||||||||||||| ||||| |||||||||  || ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  14133324 tatgaaaaactattatttatactaagtaactacctacacagaaacgttcgaatgtaactgctaataactacctaagatacatcttaattgaatttcaact 14133225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 583 - 800
Target Start/End: Original strand, 1934586 - 1934791
Alignment:
Q  583 tgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaactt 682  Q
    |||||||||  ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| |||||| |||  |||||| ||||  ||||    
T  1934586 tgcttgaaaaaaacaagtaaattgcaaggaatttaaaagaataaacttaaattgcataaattgaatgtaagttggtacacagattcatatattgtgactt 1934685  T
Q  683 gtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttat 782  Q
    || ||||||    ||||||||||       |||  |||||| |||||||| | |||||||||||||||||| ||||||| | |||||||||| |||||||    
T  1934686 gttactcgt----ttctctctga-------ata-cttgagtgtaagttttatatatgattgaattgtgacctatttttcctatgaaaaactactatttat 1934773  T
Q  783 actaagtaactatctaca 800  Q
    |||||||||||| |||||    
T  1934774 actaagtaactacctaca 1934791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 625 - 761
Target Start/End: Original strand, 132432 - 132564
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    |||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||||    ||||||||   ||||  ||| |||| ||     
T  132432 aaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgt----ttctctcttccatgcaaataatttgcgtg 132527  T
Q  725 taagttttctgtatgattgaattgtgacccatttttc 761  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  132528 taagttttttgtatgattgaattgtgacccttttttc 132564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 626 - 753
Target Start/End: Original strand, 43135564 - 43135687
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||| ||  |||||||||||||||||| |||| |||||||||| |||||||||||||||||    ||||||   ||||||||| ||||||| |    
T  43135564 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgttt----ctctcttccatgcggataatttgagtgt 43135659  T
Q  726 aagttttctgtatgattgaattgtgacc 753  Q
    ||||||| ||||||||||||||||||||    
T  43135660 aagttttttgtatgattgaattgtgacc 43135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 625 - 786
Target Start/End: Complemental strand, 13101979 - 13101823
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    ||||||||||| |||  |||||||||||||||||| |||  || ||||||| | |||||| ||||||||    |||||| |||||||||||||||||||     
T  13101979 aaacttaaattacattgattgaatgtaaattggtacacagatttatacatttcgacttgtaactcgttt----ctctct-aaatgcggatagtttgagtg 13101885  T
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatacta 786  Q
    || |||||||||||| ||||| |||||||| |||||| | ||| |||||  |||||||||||    
T  13101884 tatgttttctgtatggttgaactgtgacccgtttttcctatgagaaactgctatttatacta 13101823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 1934415 - 1934506
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    |||||||||||||||| ||| ||| |||||||||||| ||||  ||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  1934415 tgtttaccttgatttttggtaaacgaccgttggtttaaaaatagttacttgcaagatcaaccagtaaatcttaggacatagtgtgtttgtta 1934506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 580 - 783
Target Start/End: Original strand, 12844504 - 12844704
Alignment:
Q  580 aattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgca 678  Q
    |||| ||| |||| |||||||||||||||| || |||||||| | |  | | |||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  12844504 aattacttaaaataaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgtacattttcatacattgca 12844603  T
Q  679 acttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattat 778  Q
    |||||| ||||||| |    || ||   || |||| ||||||||  ||||||||  ||||||||||||||||||||||||| | |  ||||||||| |||    
T  12844604 acttgtaactcgttag----tcgcttccatacggacagtttgagcgtaagtttttagtatgattgaattgtgacccattttccctaagaaaaactactat 12844699  T
Q  779 ttata 783  Q
    |||||    
T  12844700 ttata 12844704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 583 - 786
Target Start/End: Original strand, 14345512 - 14345711
Alignment:
Q  583 tgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaact 681  Q
    |||| |||| ||||||||| ||||||| | ||||||||| |  |||||||||||||||  |||||||||||||| ||| |||  ||||||||||   |||    
T  14345512 tgctcgaaaagaacaagtatattgcaaaggaatttaaagaaacaaacttaaattgcattgattgaatgtaaattagtacacaaattcatacattttgact 14345611  T
Q  682 tgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattattta 781  Q
    | | ||||||||    |||||| ||||| |||||||||||| ||||||||||||| |  |||||||||||||| |||||| | ||| ||| |  ||||||    
T  14345612 tataactcgttt----ctctct-aaatgtggatagtttgagcataagttttctgtgtagttgaattgtgacccgtttttcctatgagaaatttatattta 14345706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 598 - 834
Target Start/End: Original strand, 13905855 - 13906089
Alignment:
Q  598 agtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcataca-ttgcaacttg-tgactcgtttgc 695  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||| |||  |||||||| |||||||||| | |||| |        
T  13905855 agtaaattgcaaggaatttaaagga-taaacttaaattgcataaa-tgaatgtaaagtggtacacagattcatacatttgcaacttgtttactcat---- 13905948  T
Q  696 ttctctctgaaatgcggatagttt--gagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatactaagtaact 793  Q
    ||||| || |  ||||||||||||  | || |||||||| ||| |   ||||||||||||| |||||| | ||||||||| |||||||||||||||||||    
T  13905949 ttctc-ctaatgtgcggatagttttagtgtgtaagttttgtgtgtatgtgaattgtgacccgtttttcctatgaaaaactcttatttatactaagtaact 13906047  T
Q  794 atctacaaagaaac-gtttaacgtaactgctaataactaccc 834  Q
      ||| | |||||| ||  ||| |||| ||||||||||||||    
T  13906048 gcctatacagaaactgtcgaacataaccgctaataactaccc 13906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 14148093 - 14148014
Alignment:
Q  386 attttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtt 465  Q
    ||||| ||| ||| |||| ||||||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||    
T  14148093 atttttggtaaacaaccgctggtttacaaatggttacttgcaagatcaaccagtaaatcttaagacatattgtgtttgtt 14148014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 132197 - 132280
Alignment:
Q  384 tgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttag-gatatattgtgtttgtta 466  Q
    ||||||| ||| ||| |||||||||||| ||||  ||||||| |||||||||||||||||||||| || |||||||||||||||    
T  132197 tgatttttggtaaacaaccgttggtttaaaaatatttacttgcaagatcaaccagtaaatcttagcgacatattgtgtttgtta 132280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 6037627 - 6037744
Alignment:
Q  575 aagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcataca- 673  Q
    |||||||||||| ||||  ||||| ||||||||||| |||||| ||||  ||| |||||||||||||| |||||||||||||||| |||  ||||||||     
T  6037627 aagtaaattgctagaaaa-aacaaataaattgcaaggaatttagaggaaaaaatttaaattgcataaa-tgaatgtaaattggtacacagattcatacat 6037724  T
Q  674 ttgcaacttgtgactcgttt 693  Q
    ||||||| ||| ||||||||    
T  6037725 ttgcaacgtgttactcgttt 6037744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 693
Target Start/End: Complemental strand, 14000929 - 14000798
Alignment:
Q  563 ttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtaga 661  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||| | ||||||||| |  |||| |||| |||||  ||| |||||||||||||| |    
T  14000929 ttcaaaggaataaagtaaattgcttgaaaaaaacaagtaaattgcaatggaatttaaagaaacaaacgtaaaatgcattgattaaatgtaaattggtaca 14000830  T
Q  662 cattttcatacattgcaacttgtgactcgttt 693  Q
    ||  |||||| |||   |||||| ||||||||    
T  14000829 cagattcatatattatgacttgttactcgttt 14000798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 705 - 786
Target Start/End: Original strand, 55002420 - 55002500
Alignment:
Q  705 aaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatacta 786  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||| |||||| | ||| |||||  |||||||||||    
T  55002420 aaatgcggatagtttgcgtgtaagttttttgtatgattgaattgtgacccgtttttc-tttgagaaactgctatttatacta 55002500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 10139895 - 10139760
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  10139895 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattga 10139800  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||| |||||||||    
T  10139799 attgtgacccgtttttcctaagaaaaactactatttatac 10139760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 13024011 - 13023962
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgt 691  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  13024011 attgaatgtaagttggtacacatattcatacattgcaacttgtgactcgt 13023962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 646 - 781
Target Start/End: Complemental strand, 10171262 - 10171130
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  10171262 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattga 10171167  T
Q  745 attgtgacccatttttcatgtgaaaaactattattta 781  Q
    |||||||||| |||||| |  ||||||||| ||||||    
T  10171166 attgtgacccgtttttcctaagaaaaactactattta 10171130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 13299533 - 13299599
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  13299533 ttgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatac 13299599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 13310191 - 13310257
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  13310191 ttgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatac 13310257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 14683217 - 14683283
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  14683217 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 14683283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 458
Target Start/End: Original strand, 6036130 - 6036171
Alignment:
Q  417 gattacttgtaagatcaaccagtaaatcttaggatatattgt 458  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  6036130 gattacttgtaagatcaaccggtaaatcttaagatatattgt 6036171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 405 - 449
Target Start/End: Complemental strand, 14133976 - 14133932
Alignment:
Q  405 tggtttacaaatgattacttgtaagatcaaccagtaaatcttagg 449  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||    
T  14133976 tggtttacaaatggttacttgcaagatcaaccattaaatcttagg 14133932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 589 - 684
Target Start/End: Complemental strand, 22445113 - 22445017
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgt 684  Q
    |||| |||||||||||||||| || |||||||| | | ||||||||||| ||  | | ||||||| |||||| |||  |||||||||||||||||||    
T  22445113 aaataaacaagtaaattgcaaagacatttaaagaaatgaacttaaattggattgactaaatgtaagttggtacacaaattcatacattgcaacttgt 22445017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 694
Target Start/End: Original strand, 12021408 - 12021523
Alignment:
Q  580 aattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgca 678  Q
    |||| ||| ||||||||||||||||||||| || |||||||| | |  | | |||||||    | ||||||||| |||||  |||| |||||||||||||    
T  12021408 aattacttaaaatgaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgccatgactgaatgtaagttggtgcacatattcatacattgca 12021507  T
Q  679 acttgtgactcgtttg 694  Q
    |||||||||| |||||    
T  12021508 acttgtgacttgtttg 12021523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 784
Target Start/End: Original strand, 12021543 - 12021610
Alignment:
Q  717 tttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||| ||||||||  |||||||||||||||||||  |||||| |  ||||||||| |||||||||    
T  12021543 tttgagtgtaagtttttagtatgattgaattgtgacctctttttcctaagaaaaactactatttatac 12021610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 784
Target Start/End: Complemental strand, 12492036 - 12491916
Alignment:
Q  661 acattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgacccatttt 759  Q
    |||| |||||||||||||||||||||||||||||    || ||   || |||| | | || ||| ||||||||  |||||||||||||||||||| ||||    
T  12492036 acatgttcatacattgcaacttgtgactcgtttg----tcgcttccatacggacattatttagtgtaagtttttagtatgattgaattgtgacccttttt 12491941  T
Q  760 tcatgtgaaaaactattatttatac 784  Q
    || |  ||||||||| |||||||||    
T  12491940 tcctaagaaaaactactatttatac 12491916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 784
Target Start/End: Complemental strand, 13023940 - 13023873
Alignment:
Q  717 tttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| | |||||||    
T  13023940 tttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactttttatac 13023873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 725 - 793
Target Start/End: Original strand, 6037772 - 6037837
Alignment:
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatactaagtaact 793  Q
    |||||||| |||| ||||||||||||||| ||||||| | ||||||||  ||||||||||||| |||||    
T  6037772 taagttttgtgta-gattgaattgtgacctatttttcttatgaaaaac--ttatttatactaaataact 6037837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 744 - 793
Target Start/End: Original strand, 10832437 - 10832486
Alignment:
Q  744 aattgtgacccatttttcatgtgaaaaactattatttatactaagtaact 793  Q
    |||||||||||||||| | | || |||||| |||||||||||||||||||    
T  10832437 aattgtgacccattttccctatggaaaactcttatttatactaagtaact 10832486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 1e-65; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 554 - 865
Target Start/End: Complemental strand, 20524353 - 20524054
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaa 653  Q
    |||||| |||||||||| |||||||||| ||||||||| ||||||||||||||| |  ||||||||||| ||| |||||||||         ||||||||    
T  20524353 gagattatcttcaaaggtttaaagtaaaatgcttgaaaagaacaagtaaattgctatgaatttaaaggaataagcttaaattg---------aatgtaaa 20524263  T
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacc 753  Q
    |||||| | |  ||||||||||||||||||||||||||||     ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||     
T  20524262 ttggtacaaaaattcatacattgcaacttgtgactcgtttt----tctcttaaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgaca 20524167  T
Q  754 catttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataactacccaagatacatcttaattaa 852  Q
      |||||| | |||||||||||||||||||||||||||||| ||||| |||||||||  ||||||||  |||| ||||||| ||||||| | |||||| |    
T  20524166 tgtttttcctatgaaaaactattatttatactaagtaactacctacacagaaacgttcgaacgtaaccactaacaactacctaagatacgtgttaattga 20524067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 563 - 831
Target Start/End: Complemental strand, 20442430 - 20442165
Alignment:
Q  563 ttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtaga 661  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||| | || |||||| | ||||| ||||||||||  || ||||||||||||||| |    
T  20442430 ttcaaaggaataaagtaaattgcttgaaaagaacaagtaaattgcaatggaaattaaagaaataaacgtaaattgcattgatcgaatgtaaattggtaca 20442331  T
Q  662 cattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttc 761  Q
     |  |||||||||||  |||||| ||||||||     |||||||| |||||||||||||| | ||||||||||||||||||||||||||||    |||||    
T  20442330 gagattcatacattgtgacttgttactcgttta----tctctgaa-tgcggatagtttgattgtaagttttctgtatgattgaattgtgacatgcttttc 20442236  T
Q  762 atgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataacta 831  Q
     | |||||||||| ||||||||||||||||||| ||||| ||||| ||| |||| ||||||||||||||||    
T  20442235 ctatgaaaaactactatttatactaagtaactacctacacagaaatgttctaacataactgctaataacta 20442165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 583 - 833
Target Start/End: Original strand, 30051841 - 30052089
Alignment:
Q  583 tgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttca-tacattgcaac 680  Q
    ||||||||| ||||||||||||||||| | ||||||||| | ||||  ||||||||||| | |||||||||||||||| |||  |||| |||||||  ||    
T  30051841 tgcttgaaaagaacaagtaaattgcaaaggaatttaaagaaataaaagtaaattgcatagactgaatgtaaattggtacacagattcaatacattgtgac 30051940  T
Q  681 ttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattattt 780  Q
    |||| ||||||||    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||| ||| |||||    
T  30051941 ttgttactcgttt----ctctctgaa-tgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagctactattt 30052035  T
Q  781 atactaagtaactatctacaaagaaacg-tttaacgtaactgctaataactacc 833  Q
    |||||||||||||| ||||| |||| || |  ||| |||||||||| |||||||    
T  30052036 atactaagtaactacctacacagaaccgatcgaacttaactgctaaaaactacc 30052089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 583 - 833
Target Start/End: Original strand, 30142885 - 30143133
Alignment:
Q  583 tgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttca-tacattgcaac 680  Q
    ||||||||| ||||||||||||||||| | ||||||||| | ||||  ||||||||||| | |||||||||||||||| |||  |||| |||||||  ||    
T  30142885 tgcttgaaaagaacaagtaaattgcaaaggaatttaaagaaataaaagtaaattgcatagactgaatgtaaattggtacacagattcaatacattgtgac 30142984  T
Q  681 ttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattattt 780  Q
    |||| ||||||||    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||| ||| |||||    
T  30142985 ttgttactcgttt----ctctctgaa-tgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagctactattt 30143079  T
Q  781 atactaagtaactatctacaaagaaacg-tttaacgtaactgctaataactacc 833  Q
    |||||||||||||| ||||| |||| || |  ||| |||||||||| |||||||    
T  30143080 atactaagtaactacctacacagaaccgatcgaacttaactgctaaaaactacc 30143133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 583 - 808
Target Start/End: Original strand, 30089856 - 30090078
Alignment:
Q  583 tgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttca-tacattgcaac 680  Q
    ||||||||| ||||||||||||||||| | ||||||||| | ||||| ||||||||||| | |||||||||||||||| |||| |||| |||||||  ||    
T  30089856 tgcttgaaaagaacaagtaaattgcaaaggaatttaaagaaataaacgtaaattgcatagactgaatgtaaattggtacacatattcaatacattgtgac 30089955  T
Q  681 ttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattattt 780  Q
    |||| |||| |||    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||| | |||||| | | |||||    
T  30089956 ttgttactcattt----ctctctgaa-tgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaaagcgactattt 30090050  T
Q  781 atactaagtaactatctacaaagaaacg 808  Q
    |||||| ||||||| ||||| |||||||    
T  30090051 atactatgtaactacctacacagaaacg 30090078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 583 - 808
Target Start/End: Original strand, 30126461 - 30126683
Alignment:
Q  583 tgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttca-tacattgcaac 680  Q
    ||||||||| ||||||||||||||||| | ||||||||| | ||||| ||||||||||| | |||||||||||||||| |||| |||| |||||||  ||    
T  30126461 tgcttgaaaagaacaagtaaattgcaaaggaatttaaagaaataaacgtaaattgcatagactgaatgtaaattggtacacatattcaatacattgtgac 30126560  T
Q  681 ttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattattt 780  Q
    |||| |||| |||    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||| | |||||| | | |||||    
T  30126561 ttgttactcattt----ctctctgaa-tgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaaagcgactattt 30126655  T
Q  781 atactaagtaactatctacaaagaaacg 808  Q
    |||||| ||||||| ||||| |||||||    
T  30126656 atactatgtaactacctacacagaaacg 30126683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 561 - 831
Target Start/End: Original strand, 20281066 - 20281333
Alignment:
Q  561 tcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggta 659  Q
    |||||||| || | |||||| |||||||||| ||||||||||||||||| | ||||||||  | ||||| ||||||||||| || |||||||||||||||    
T  20281066 tcttcaaacgaattaagtaagttgcttgaaaagaacaagtaaattgcaatggaatttaaaaaaataaacgtaaattgcatagatcgaatgtaaattggta 20281165  T
Q  660 gacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttt 759  Q
     |||   |||||||||   |||||| ||||||||    ||||||||| |||||||||| ||||| ||| |||||||||||| ||||||||||||  ||||    
T  20281166 cacagaatcatacattctgacttgttactcgttt----ctctctgaa-tgcggatagtatgagtgtaaattttctgtatgactgaattgtgacctgtttt 20281260  T
Q  760 tcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataacta 831  Q
    |  | |||||||||| ||||||||||||||||||| ||||  | ||| ||| |||| ||||||||||||||||    
T  20281261 ttctttgaaaaactactatttatactaagtaactacctactcataaatgttctaacataactgctaataacta 20281333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 554 - 808
Target Start/End: Original strand, 23995578 - 23995821
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaa 652  Q
    |||||| ||||||||||| ||||||||||||||||||   |||||| ||||||||| ||||||||||  |  |||| |||||| ||||       |||||    
T  23995578 gagattatcttcaaaggaataaagtaaattgcttgaacaaaacaagcaaattgcaatgaaatttaaataaacaaacgtaaatttcata-------tgtaa 23995670  T
Q  653 attggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgac 752  Q
    ||||||| |||  |||||||||||  |||||| ||||||||    |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  23995671 attggtacacagattcatacattgtgacttgttactcgttt----ctctct-aaatgcagatagtttgagtgtaagttttctgtatgattgaattgtgac 23995765  T
Q  753 ccatttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacg 808  Q
       |||||| | | |||||||| ||||||||||||||||||| ||||| |||||||    
T  23995766 atgtttttcctataaaaaactactatttatactaagtaactacctacacagaaacg 23995821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 573 - 754
Target Start/End: Original strand, 10480329 - 10480507
Alignment:
Q  573 taaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcata 671  Q
    ||||| |||||||| ||||| |||||||||||||||| || ||||||   |  |||||||||||||||  |||||||||||||||||| |||| ||||||    
T  10480329 taaaggaaattgctcgaaataaacaagtaaattgcaaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcata 10480428  T
Q  672 cattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgaccc 754  Q
    |||||||||||| |||    ||| ||||||||  ||||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  10480429 cattgcaacttgcgac----ttgtttctctcttgaatgcggatagttcgagtgtaagttttgtgtatgattggattgtgaccc 10480507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 625 - 786
Target Start/End: Original strand, 21904954 - 21905111
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    |||||||||||||||  |||||||||||||||||| |||| ||||||||||| |||||||||||||||     ||||||  |||| |||||||||||||     
T  21904954 aaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgttc----ctctcttgaatgtggatagtttgagtg 21905049  T
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatacta 786  Q
    |||||||| ||||||||||  ||||||||  |||| | | ||||||||||||||||||||||    
T  21905050 taagttttttgtatgattggtttgtgacctgttttccctatgaaaaactattatttatacta 21905111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 626 - 783
Target Start/End: Original strand, 34827608 - 34827761
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  |||||||||||||||||| |||| |||||||||| |||||||||||||||||    ||||||   |||| |||| ||||||| |    
T  34827608 aacttaaattgcattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgttt----ctctcttccatgcagataatttgagtgt 34827703  T
Q  726 aagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttata 783  Q
    ||||||| ||||||||||||||||||||| |||| |  | ||||||||| ||||||||    
T  34827704 aagttttttgtatgattgaattgtgaccctttttcctagggaaaaactactatttata 34827761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 626 - 754
Target Start/End: Complemental strand, 22593894 - 22593770
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  ||||||| |||||||||| |||| ||||||||||||||||||||||||||||    ||||||   ||||| ||| ||||||| |    
T  22593894 aacttaaattgcattgattgaatataaattggtacacatgttcatacattgcaacttgtgactcgttt----ctctcttccatgcgcataatttgagtgt 22593799  T
Q  726 aagttttctgtatgattgaattgtgaccc 754  Q
    ||||||| |||||||||||||||||||||    
T  22593798 aagttttttgtatgattgaattgtgaccc 22593770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 626 - 759
Target Start/End: Original strand, 25349258 - 25349387
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  |||||||||||||||||| |||| | ||||||||||||||| |||||||||     ||||||  |||||||||||||||||| |    
T  25349258 aacttaaattgcattgattgaatgtaaattggtacacatatccatacattgcaacttatgactcgttc----ctctcttgaatgcggatagtttgagtgt 25349353  T
Q  726 aagttttctgtatgattgaattgtgacccatttt 759  Q
    ||||||| |||||||||  |||||||||| ||||    
T  25349354 aagttttgtgtatgatttgattgtgacccgtttt 25349387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 626 - 784
Target Start/End: Complemental strand, 37130555 - 37130400
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||| |   |||||||||||||||||| |||| ||||||||||||||||||||||||||    ||||||||   ||||||||| ||||| | |    
T  37130555 aacttaaattgtactgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgt----ttctctcttccatgcggataatttgattgt 37130460  T
Q  726 aagttttctgtatgattgaattgtgacccatttttcat-gtgaaaaactattatttatac 784  Q
    ||||||| ||||||||||||||| ||||| |||| | | | ||||||||| |||||||||    
T  37130459 aagttttttgtatgattgaattgcgaccctttttccctagggaaaaactactatttatac 37130400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 625 - 742
Target Start/End: Original strand, 23769365 - 23769478
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    |||||||||||||||  |||||||||||||||||| |||| ||||||||||| ||||||||||||||    ||||||||  |||||||||| |||||||     
T  23769365 aaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgt----ttctctcttgaatgcggataatttgagtg 23769460  T
Q  725 taagttttctgtatgatt 742  Q
    ||| |||| |||||||||    
T  23769461 taaattttgtgtatgatt 23769478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 589 - 784
Target Start/End: Original strand, 16664625 - 16664817
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| || |||||||| | | ||||||||||||||  | ||||||||  |||||| | |  ||||||||||||||||||||||    
T  16664625 aaataaacaagtaaattgcaaagacatttaaagaaatgaacttaaattgcattgactgaatgtaggttggtacatagattcatacattgcaacttgtgac 16664724  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||    || || ||   || |||||||||||||  ||||||||  |||||||||||||||||||| |||||  |  ||||||||| |||||||||    
T  16664725 tcgt----ttatcgcttccatacggatagtttgagcgtaagtttttagtatgattgaattgtgaccctttttttctaagaaaaactactatttatac 16664817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 589 - 784
Target Start/End: Complemental strand, 22881135 - 22880943
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| || |||||||| | |  | ||||||| |||  | ||||||||| |||||| |||| ||||||||||||||||||||||    
T  22881135 aaataaacaagtaaattgcaaagacatttaaagaaatgcatttaaatttcattgagtgaatgtaacttggtacacatattcatacattgcaacttgtgac 22881036  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||    || || ||   || ||||||||||||| ||| |||||  |||||||||||||||||| | |||||| |  ||||||||| |||||||||    
T  22881035 tcgt----ttatcgctttcatacggatagtttgagcatatgtttttagtatgattgaattgtgacacttttttcctaagaaaaactactatttatac 22880943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 642 - 761
Target Start/End: Original strand, 23814991 - 23815107
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttct-gtatga 740  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||    ||||||   ||||||||| ||| ||| |||||||| | ||||||    
T  23814991 attgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttt----ctctcttccatgcggataattttagtgtaagtttttttgtatga 23815086  T
Q  741 ttgaattgtgacccatttttc 761  Q
    | |||||||||||| ||||||    
T  23815087 tagaattgtgacccttttttc 23815107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 642 - 753
Target Start/End: Original strand, 28567719 - 28567825
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgat 741  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||| |    ||||||||   ||||||||| ||||||| |||||||| ||||||||    
T  28567719 attgaatgtaaattggtacacatgttcatacattgcaacttgtgactcat----ttctctcttccatgcggataatttgagtgtaagtttt-tgtatgat 28567813  T
Q  742 tgaattgtgacc 753  Q
     |||||||||||    
T  28567814 agaattgtgacc 28567825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 589 - 784
Target Start/End: Complemental strand, 31818106 - 31817914
Alignment:
Q  589 aaatgaacaagtaaattgcaagaa-atttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| || |||||||| | | || | |||||||||  | ||||||||| ||||||  ||| |||||| |||||||||||||||    
T  31818106 aaataaacaagtaaattgcaaaaacatttaaagaaatgaattgaaattgcattgactgaatgtaagttggtactcatattcatatattgcaacttgtgac 31818007  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||    || || ||   || |||||||||||||  ||| ||||  ||| |||||||||||||||| ||||||||  ||||||||| |||||||||    
T  31818006 tcgt----ttatcgcttccatacggatagtttgagcgtaaatttttagtacgattgaattgtgacccgtttttcataagaaaaactactatttatac 31817914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 624 - 753
Target Start/End: Original strand, 21256456 - 21256574
Alignment:
Q  624 taaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagt 723  Q
    ||||||||||||||||  |||||||||||||||||| |||| ||||||||       |||||||||||    ||||||||   ||||||||| |||||||    
T  21256456 taaacttaaattgcattgattgaatgtaaattggtacacatgttcataca-------ttgtgactcgt----ttctctcttccatgcggataatttgagt 21256544  T
Q  724 ataagttttctgtatgattgaattgtgacc 753  Q
     |||||||| ||||||||||||||||||||    
T  21256545 gtaagttttttgtatgattgaattgtgacc 21256574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 642 - 760
Target Start/End: Original strand, 23803361 - 23803476
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttct-gtatga 740  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||||||    ||||||   ||||||||| |||||||  ||||||| | ||||||    
T  23803361 attgaatgtaaattggtacacatgttcatacattgcaacttgttactcgttt----ctctcttccatgcggataatttgagtgcaagtttttttgtatga 23803456  T
Q  741 ttgaattgtgacccattttt 760  Q
    | |||||||||||| |||||    
T  23803457 tagaattgtgaccctttttt 23803476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 34827357 - 34827450
Alignment:
Q  374 gtgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    ||||||||  ||||||| ||| ||| |||| ||||||| ||||  |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  34827357 gtgtttacactgatttttggtaaacaaccgctggtttaaaaatatttacttgtaagatcaaccagtaaatcttaaggaaatattgtgtttgtta 34827450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 583 - 693
Target Start/End: Original strand, 30244055 - 30244167
Alignment:
Q  583 tgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttc-atacattgcaac 680  Q
    ||||||||| ||||||||||||||||| | ||||||||| | ||||| ||||||||||| | |||||||||||||||| |||  ||| ||||||||  ||    
T  30244055 tgcttgaaaagaacaagtaaattgcaaaggaatttaaagaaataaacgtaaattgcatagactgaatgtaaattggtacacaaattcaatacattgtgac 30244154  T
Q  681 ttgtgactcgttt 693  Q
    |||| ||||||||    
T  30244155 ttgttactcgttt 30244167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 642 - 693
Target Start/End: Original strand, 23829839 - 23829890
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgttt 693  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  23829839 attgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttt 23829890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 575 - 684
Target Start/End: Complemental strand, 27157294 - 27157187
Alignment:
Q  575 aagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcataca- 673  Q
    |||||||||||| |||| ||| |||||||||| ||| |||||||||||  |||||||||||||||||| |||||||||||||||| | |  ||||||||     
T  27157294 aagtaaattgctagaaa-gaataagtaaattggaaggaatttaaaggaa-aaacttaaattgcataaa-tgaatgtaaattggtacatagattcatacat 27157198  T
Q  674 ttgcaacttgt 684  Q
    |||||||||||    
T  27157197 ttgcaacttgt 27157187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 784
Target Start/End: Original strand, 23870538 - 23870657
Alignment:
Q  661 acattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccattttt 760  Q
    |||| ||||||||||||||||||||||||||||   ||||||     |||  ||| ||||||| |||||||| ||||||||||||||||||||  |||||    
T  23870538 acatgttcatacattgcaacttgtgactcgtttctctctctcg----tgcaaataatttgagtgtaagttttttgtatgattgaattgtgaccacttttt 23870633  T
Q  761 catgtgaaaaactattatttatac 784  Q
      |  ||||||||| |||||||||    
T  23870634 tttaggaaaaactactatttatac 23870657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 575 - 659
Target Start/End: Original strand, 22271152 - 22271233
Alignment:
Q  575 aagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggta 659  Q
    ||||||||||||  ||| ||| || ||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  22271152 aagtaaattgctaaaaa-gaataactaaattgcaaggaatttaagggat-aaacttaaattgcataaa-tgaatgtaaattggta 22271233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 20524530 - 20524440
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    |||||||||||| ||||||| ||| || | || ||||| |||| ||||||| || |||||||||||||| ||| || |||||||||||||||    
T  20524530 tgtttaccttgaatttcggtaaacaactgatgatttactaatggttacttgcaa-atcaaccagtaaattttaagacatattgtgtttgtta 20524440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 23995403 - 23995494
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    ||||||||||| |||| ||| ||| ||||||| |||| ||||  ||| ||||||||||||||||||||||   ||  |||||||||||||||    
T  23995403 tgtttaccttggtttttggttaacaaccgttgatttaaaaatagttatttgtaagatcaaccagtaaatcccggggcatattgtgtttgtta 23995494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 30051638 - 30051729
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    ||||||||||| |||| ||| ||| |||||||  ||| || |  |||| || |||||||||||||||||||||||| ||| |||||||||||    
T  30051638 tgtttaccttggtttttggtaaacaaccgttgacttaaaattagttacatgcaagatcaaccagtaaatcttaggacatactgtgtttgtta 30051729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 30089653 - 30089744
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    ||||||||||| |||| ||| ||| |||||||  ||| || |  |||| || |||||||||||||||||||||||| ||| |||||||||||    
T  30089653 tgtttaccttggtttttggtaaacaaccgttgacttaaaattagttacatgcaagatcaaccagtaaatcttaggacatactgtgtttgtta 30089744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 30142682 - 30142773
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    ||||||||||| |||| ||| ||| |||||||  ||| || |  |||| || |||||||||||||||||||||||| ||| |||||||||||    
T  30142682 tgtttaccttggtttttggtaaacaaccgttgacttaaaattagttacatgcaagatcaaccagtaaatcttaggacatactgtgtttgtta 30142773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 30243852 - 30243943
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    ||||||||||| |||| ||| ||| |||||||  ||| || |  |||| || |||||||||||||||||||||||| ||| |||||||||||    
T  30243852 tgtttaccttggtttttggtaaacaaccgttgacttaaaattagttacatgcaagatcaaccagtaaatcttaggacatactgtgtttgtta 30243943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 21256205 - 21256299
Alignment:
Q  374 gtgtttaccttgattttcggtgaaccaccgttggttt-acaaatgattacttgtaagatcaaccagtaaatcttagg-atatattgtgtttgtta 466  Q
    ||||||||  ||||||| ||| ||| |||| |||||| | ||||  ||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  21256205 gtgtttacactgatttttggtaaacaaccgctggttttaaaaatatttacttgcaagatcaaccagtaaatcttaggaacatattgtgtttgtta 21256299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 741 - 791
Target Start/End: Original strand, 22272658 - 22272708
Alignment:
Q  741 ttgaattgtgacccatttttcatgtgaaaaactattatttatactaagtaa 791  Q
    |||||||||||||| |||||| | ||||||||| |||||||||||||||||    
T  22272658 ttgaattgtgacccgtttttcttatgaaaaactcttatttatactaagtaa 22272708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 654 - 784
Target Start/End: Complemental strand, 22648699 - 22648572
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgac 752  Q
    |||||| |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||||||||||    
T  22648699 ttggtacacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgac 22648604  T
Q  753 ccatttttcatgtgaaaaactattatttatac 784  Q
    |  |||||| |  ||||||||| |||||||||    
T  22648603 ctgtttttcctaagaaaaactactatttatac 22648572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 23615183 - 23615249
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  ||||||||||||||||||| ||||||| |  ||||||||| |||||||||    
T  23615183 ttgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatttatac 23615249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 24896698 - 24896632
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  24896698 ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 24896632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 24967594 - 24967528
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  24967594 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 24967528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 39227522 - 39227588
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  39227522 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 39227588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 23769126 - 23769207
Alignment:
Q  383 ttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    |||||||| ||| ||| | | |||||||| || | |||||||| |||||||||||||||||||||  | |||||||||||||||    
T  23769126 ttgatttttggtaaacaatcattggtttaaaattaattacttgcaagatcaaccagtaaatctta--acatattgtgtttgtta 23769207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 753
Target Start/End: Complemental strand, 22708287 - 22708199
Alignment:
Q  661 acattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacc 753  Q
    |||| |||||||||||||| |||||| ||||||    ||||||   ||||||||| ||| ||| |||||||| ||||| ||||||||||||||    
T  22708287 acatgttcatacattgcaatttgtgattcgttt----ctctcttgcatgcggataatttaagtgtaagttttttgtataattgaattgtgacc 22708199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 784
Target Start/End: Original strand, 23190269 - 23190389
Alignment:
Q  661 acattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgacccatttt 759  Q
    |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||| |||||||||||||||| ||||    
T  23190269 acatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgacccgtttt 23190364  T
Q  760 tcatgtgaaaaactattatttatac 784  Q
    || |  ||||||||| |||||||||    
T  23190365 tcctaagaaaaactactatttatac 23190389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 784
Target Start/End: Original strand, 23611524 - 23611644
Alignment:
Q  661 acattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgacccatttt 759  Q
    |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||| |||||||||||||||| ||||    
T  23611524 acatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgacccgtttt 23611619  T
Q  760 tcatgtgaaaaactattatttatac 784  Q
    || |  ||||||||| |||||||||    
T  23611620 tcctaagaaaaactactatttatac 23611644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 20280912 - 20280974
Alignment:
Q  405 tggtttacaaatgattacttgtaagatcaaccagtaaatc-ttaggatatattgtgtttgtta 466  Q
    ||||||| |||| |||||||| ||||| |||||||||||| || ||| |||||||||||||||    
T  20280912 tggtttaaaaataattacttgcaagattaaccagtaaatctttgggacatattgtgtttgtta 20280974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 375 - 450
Target Start/End: Original strand, 23203566 - 23203642
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaa--atgattacttgtaagatcaaccagtaaatcttagga 450  Q
    |||||||  ||||||| ||| ||||| ||||||||| |||  ||| ||||||| ||||||||||||||||||||||||    
T  23203566 tgtttacactgatttttggtaaaccatcgttggttt-caatgatgtttacttgcaagatcaaccagtaaatcttagga 23203642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 23203939 - 23204005
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  ||| |||||||||||||||| |||||| |  ||||||||| |||||||||    
T  23203939 ttgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23204005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 708 - 763
Target Start/End: Original strand, 25118979 - 25119036
Alignment:
Q  708 tgcggatagtttgag--tataagttttctgtatgattgaattgtgacccatttttcat 763  Q
    |||||||||||||||  | |||| |||| ||||| |||||||||||||||||||||||    
T  25118979 tgcggatagtttgagcgtgtaagctttcggtatgtttgaattgtgacccatttttcat 25119036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 22594062 - 22593997
Alignment:
Q  402 cgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    |||||||||| ||||  ||||||| ||||||||||| |||||||| || | |||||||||||||||    
T  22594062 cgttggtttaaaaatagttacttgcaagatcaaccaataaatcttaagaacatattgtgtttgtta 22593997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 4e-65; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 554 - 859
Target Start/End: Original strand, 16713182 - 16713483
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgctt-gaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaa 652  Q
    |||||| |||| || ||||||| ||||||||||| |||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  16713182 gagattatctttaagggattaacgtaaattgctttgaacagaacaagtaaattgcaaggaatttaaaggaataaacttaaattgcataaattgaatgtaa 16713281  T
Q  653 attggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgac 752  Q
    ||||||| |||| ||||||||| |  |||| | ||||||    ||||||||| ||||| |||||||||||| || |||||||||||||||||||||||||    
T  16713282 attggtacacatattcatacatcgtgacttattactcgt----ttctctctg-aatgcagatagtttgagtgtacgttttctgtatgattgaattgtgac 16713376  T
Q  753 ccatttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataactacccaagatacatcttaatta 851  Q
    || |||||  | |||||||||| ||  ||||||| ||||||| |||||||||||||||  |||||||||||||||||||||  |||| |||| | ||||     
T  16713377 cc-tttttggtatgaaaaactactaactatactaggtaactaactacaaagaaacgttcgaacgtaactgctaataactactaaagacacatttgaattg 16713475  T
Q  852 aatttcaa 859  Q
    ||||||||    
T  16713476 aatttcaa 16713483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 554 - 859
Target Start/End: Original strand, 17687418 - 17687719
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgctt-gaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaa 652  Q
    |||||| |||| || ||||||| ||||||||||| |||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  17687418 gagattatctttaagggattaacgtaaattgctttgaacagaacaagtaaattgcaaggaatttaaaggaataaacttaaattgcataaattgaatgtaa 17687517  T
Q  653 attggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgac 752  Q
    ||||||| |||| ||||||||| |  |||| | ||||||    ||||||||| ||||| |||||||||||| || |||||||||||||||||||||||||    
T  17687518 attggtacacatattcatacatcgtgacttattactcgt----ttctctctg-aatgcagatagtttgagtgtacgttttctgtatgattgaattgtgac 17687612  T
Q  753 ccatttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataactacccaagatacatcttaatta 851  Q
    || |||||  | |||||||||| ||  ||||||| ||||||| |||||||||||||||  |||||||||||||||||||||  |||| |||| | ||||     
T  17687613 cc-tttttggtatgaaaaactactaactatactaggtaactaactacaaagaaacgttcgaacgtaactgctaataactactaaagacacatttgaattg 17687711  T
Q  852 aatttcaa 859  Q
    ||||||||    
T  17687712 aatttcaa 17687719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 561 - 804
Target Start/End: Original strand, 41239140 - 41239378
Alignment:
Q  561 tcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggta 659  Q
    ||||||||| | |||||||||||| |||||  ||||||||||||||||| ||||||||||| | ||||| ||||||||||  ||| ||||||||||||||    
T  41239140 tcttcaaagaaataaagtaaattgtttgaacagaacaagtaaattgcaatgaaatttaaagaaataaacgtaaattgcattgattaaatgtaaattggta 41239239  T
Q  660 gacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttt 759  Q
     |||  |||||||||||  |||||| ||||||    ||||||||| ||| |||||||||||||  |||||||| ||||||||||||||||||||| ||||    
T  41239240 cacagattcatacattgtgacttgttactcgt----ttctctctg-aatccggatagtttgagcgtaagttttatgtatgattgaattgtgacccttttt 41239334  T
Q  760 tcatgtgaaaaactattatttatactaagtaactatctacaaaga 804  Q
    || | |||||||||| ||||||||||||||||||| |||||||||    
T  41239335 tc-tatgaaaaactagtatttatactaagtaactacctacaaaga 41239378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 786
Target Start/End: Complemental strand, 18450999 - 18450778
Alignment:
Q  561 tcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggta 659  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| ||| | ||||||||| | ||||| ||||||||||  |||||||||| |||||||    
T  18450999 tcttcaaagaaataaagtaaattgcttgaaaagaacaagtaaattacaatggaatttaaagaaataaacataaattgcattgattgaatgtacattggta 18450900  T
Q  660 gacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttt 759  Q
     |||  ||||||||||   |||||| ||||||||    |||||| ||||||| ||||||| ||| ||||||||||||||| |||||||||||||  ||||    
T  18450899 cacaaattcatacattatgacttgttactcgttt----ctctct-aaatgcgaatagtttaagtgtaagttttctgtatggttgaattgtgacctgtttt 18450805  T
Q  760 tcatgtgaaaaactattatttatacta 786  Q
    ||   ||  |||||| |||||||||||    
T  18450804 tcccatgggaaactaatatttatacta 18450778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 625 - 753
Target Start/End: Original strand, 40342834 - 40342958
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    |||||||||||||||  ||| |||||||||||||| |||| ||||||||||||||||||||||||||||    ||||||   ||||||||| |||||||     
T  40342834 aaacttaaattgcattgattaaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttt----ctctcttccatgcggataatttgagtg 40342929  T
Q  725 taagttttctgtatgattgaattgtgacc 753  Q
    |||||||| ||||||||||||||||||||    
T  40342930 taagttttttgtatgattgaattgtgacc 40342958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 625 - 786
Target Start/End: Original strand, 10478172 - 10478328
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    ||||||||||||||  ||||||||||||||||||| |||  ||||||||||   |||||| ||||||||    |||||| ||||| |||||||||||||     
T  10478172 aaacttaaattgcactaattgaatgtaaattggtacacagattcatacattttgacttgtaactcgttt----ctctct-aaatgtggatagtttgagtg 10478266  T
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatacta 786  Q
    ||||||||||||||| |||||||||||||| |||||| | ||| |||||  |||| ||||||    
T  10478267 taagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatacta 10478328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 626 - 761
Target Start/End: Original strand, 10827778 - 10827909
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  ||||||||| |||||||| |||  ||||||||||||||||||||||||||    ||||||||   ||||||||| ||||||| |    
T  10827778 aacttaaattgcattgattgaatgtgaattggtacacagattcatacattgcaacttgtgactcgt----ttctctcttccatgcggataatttgagtgt 10827873  T
Q  726 aagttttctgtatgattgaattgtgacccatttttc 761  Q
    ||||||| |||||||||| | |||||||| ||||||    
T  10827874 aagttttgtgtatgattggactgtgacccttttttc 10827909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 626 - 761
Target Start/End: Original strand, 11021570 - 11021701
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  ||||||||| |||||||| |||  ||||||||||||||||||||||||||    ||||||||   ||||||||| ||||||| |    
T  11021570 aacttaaattgcattgattgaatgtgaattggtacacagattcatacattgcaacttgtgactcgt----ttctctcttccatgcggataatttgagtgt 11021665  T
Q  726 aagttttctgtatgattgaattgtgacccatttttc 761  Q
    ||||||| |||||||||| | |||||||| ||||||    
T  11021666 aagttttgtgtatgattggactgtgacccttttttc 11021701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 594 - 689
Target Start/End: Complemental strand, 18752835 - 18752739
Alignment:
Q  594 aacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactc 689  Q
    |||||||||||||||| || |||||||| | | ||||||||||||||  ||||||||||| |||||| |||  ||||||||||||||||||||||||    
T  18752835 aacaagtaaattgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttggtacacagattcatacattgcaacttgtgactc 18752739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 40342582 - 40342674
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatctta-ggatatattgtgtttgtta 466  Q
    ||||||| |||||||| ||| ||| |||| || |||| ||||  ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  40342582 tgtttacattgatttttggtaaacaaccgctgatttaaaaatatttacttgtaagatcaaccagtaaatcttagggacatattgtgtttgtta 40342674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 626 - 693
Target Start/End: Complemental strand, 10864265 - 10864198
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgttt 693  Q
    ||||||||||||||  ||||||||| |||||||| |||  ||||||||||||||||||||||||||||    
T  10864265 aacttaaattgcattgattgaatgtgaattggtacacagattcatacattgcaacttgtgactcgttt 10864198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 654 - 784
Target Start/End: Original strand, 18174872 - 18174999
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgac 752  Q
    |||||| |||| ||||||| |||||||||||||||||||||  || |||| | |  |||| ||| |||||| ||||||||  ||||||||||||||||||    
T  18174872 ttggtacacatattcatactttgcaacttgtgactcgtttg--tcgctctcaca--cggacagtattgagtgtaagtttttagtatgattgaattgtgac 18174967  T
Q  753 ccatttttcatgtgaaaaactattatttatac 784  Q
    || |||||| |  ||||||||| |||||||||    
T  18174968 ccgtttttcctaagaaaaactactatttatac 18174999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 675 - 760
Target Start/End: Original strand, 24876397 - 24876478
Alignment:
Q  675 tgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccattttt 760  Q
    |||||||||||||||||||    ||||||   ||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||    
T  24876397 tgcaacttgtgactcgttt----ctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccctttttt 24876478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 784
Target Start/End: Original strand, 11989418 - 11989533
Alignment:
Q  666 ttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgacccatttttcatg 764  Q
    ||||||||||||||||| |||||||||||    || ||   || |||||||| |||||| ||||||||  |||||||||||||||||||| |||||| |     
T  11989418 ttcatacattgcaacttatgactcgtttg----tcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccttttttccta 11989513  T
Q  765 tgaaaaactattatttatac 784  Q
     ||||||||| |||||||||    
T  11989514 agaaaaactactatttatac 11989533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 10864494 - 10864427
Alignment:
Q  400 accgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    |||| ||||||| ||||  ||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  10864494 accgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgtta 10864427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 654 - 784
Target Start/End: Original strand, 44277677 - 44277804
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgac 752  Q
    |||||| |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  |||||| |||||||||||    
T  44277677 ttggtacacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattgtgac 44277772  T
Q  753 ccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||  |  ||||||||| |||||||||    
T  44277773 ccattttttctaagaaaaactactatttatac 44277804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 466
Target Start/End: Original strand, 10827567 - 10827615
Alignment:
Q  419 ttacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  10827567 ttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgtta 10827615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 466
Target Start/End: Original strand, 11021359 - 11021407
Alignment:
Q  419 ttacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  11021359 ttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgtta 11021407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 599 - 675
Target Start/End: Complemental strand, 16191575 - 16191501
Alignment:
Q  599 gtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacatt 675  Q
    |||||||||||| || ||||||||| ||||||||||||||||||  ||||||||| ||||| |||  ||||||||||    
T  16191575 gtaaattgcaaggaacttaaaggat-aaacttaaattgcataaa-cgaatgtaaagtggtacacaaattcatacatt 16191501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 15758624 - 15758558
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||  |||||| |  ||||||||| |||||||||    
T  15758624 ttgagtgtaagttttgagtatgattgaattgtgacctctttttcctaagaaaaactactatttatac 15758558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 18115295 - 18115360
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  18115295 ttgagtgtaagtttta-gtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 18115360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 18141863 - 18141928
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  18141863 ttgagtgtaagtttta-gtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 18141928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 599 - 684
Target Start/End: Complemental strand, 18379001 - 18378917
Alignment:
Q  599 gtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcataca-ttgcaacttgt 684  Q
    |||||||||||| ||||||||||| ||||||||||||  ||||| |||||||||| ||||| | |  |||||||| |||||||||||    
T  18379001 gtaaattgcaaggaatttaaagga-taaacttaaattatataaa-tgaatgtaaagtggtacaaagattcatacatttgcaacttgt 18378917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 4e-59; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 554 - 872
Target Start/End: Complemental strand, 16778155 - 16777858
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaa 653  Q
    |||||| ||||||||| ||||| ||||| ||||||| |  ||  ||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  16778155 gagattatcttcaaagaattaatgtaaaatgcttgataaaaattagtaaattgcaaggaatttaaaggaatgaacttaaattgcataaattgaatgtaaa 16778056  T
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacc 753  Q
    |||||| |||  |||||||||||  |||||| |||||||                      ||||||||| ||||||||||||||||||||||||||| |    
T  16778055 ttggtacacaaattcatacattgtgacttgttactcgtt----------------------agtttgagtgtaagttttctgtatgattgaattgtgatc 16777978  T
Q  754 catttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataactacccaagatacatcttaattaa 852  Q
    | |||||| | |||||||||||||||||||||||||||||| ||||| |||||||||   ||||||||||||||||||| | |||||||||||||||| |    
T  16777977 cgtttttcctatgaaaaactattatttatactaagtaactacctacacagaaacgttcggacgtaactgctaataactaactaagatacatcttaattga 16777878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 625 - 786
Target Start/End: Complemental strand, 15911867 - 15911710
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    |||||||||||||||  |||||||||||||||||| |||| ||||||||||| ||||||||||||||    ||||||||  ||||||||||||||||||     
T  15911867 aaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgt----ttctctcttgaatgcggatagtttgagtg 15911772  T
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatacta 786  Q
    |||||||| ||||||||||  |||||||| ||||| | | |||||||||| |||||||||||    
T  15911771 taagttttgtgtatgattggtttgtgacctattttccttatgaaaaactactatttatacta 15911710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 575 - 792
Target Start/End: Original strand, 24974226 - 24974440
Alignment:
Q  575 aagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcataca- 673  Q
    |||||||||||| ||||| || |||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||| | |  |||| | |     
T  24974226 aagtaaattgctagaaat-aataagtaaattgcaaggaatttaaagggataaacttaaattgcataaattgaatgtaaattggtacatagattcaaagat 24974324  T
Q  674 ttgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagt--ataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaa 771  Q
    |||||| |||| ||||||    ||||| ||  ||||| ||||||||||||   ||||||||  || ||||||||||||||||  |||||| | |||||||    
T  24974325 ttgcaaattgttactcgt----ttctc-cttgaatgcagatagtttgagtgcgtaagttttgcgtgtgattgaattgtgacctttttttcctttgaaaaa 24974419  T
Q  772 ctattatttatactaagtaac 792  Q
    |||||||||||||||| ||||    
T  24974420 ctattatttatactaattaac 24974440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 575 - 793
Target Start/End: Complemental strand, 23237393 - 23237179
Alignment:
Q  575 aagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacat 674  Q
    |||||||||||| |||| ||| || ||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||| |||  |||||||||    
T  23237393 aagtaaattgctagaaa-gaaaaattaaattgcaaggaatctaaaggat-aaacttaaattgcataaat-gaatgtaaattggtacacagattcatacat 23237297  T
Q  675 tg-caacttgtg-actcgtttgcttctctctgaaatgcggatagtttgagtat--aagttttctgtatgattgaattgtgacccatttttcatgtgaaaa 770  Q
    |  ||||||||  ||||||||    ||| || || |||||||||||||||| |  ||||||| ||| |  |||||||||||||| |||||||| ||||||    
T  23237296 tttcaacttgtttactcgttt----ctc-ctaaagtgcggatagtttgagtgtgtaagttttgtgtgtatttgaattgtgacccgtttttcatatgaaaa 23237202  T
Q  771 actattatttatactaagtaact 793  Q
    ||| |||||||||||||||||||    
T  23237201 actcttatttatactaagtaact 23237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 579 - 693
Target Start/End: Complemental strand, 27818391 - 27818276
Alignment:
Q  579 aaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgc 677  Q
    |||||||||||||| |||||||||||||||| || ||||||   |  |||||||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  27818391 aaattgcttgaaataaacaagtaaattgcaaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgc 27818292  T
Q  678 aacttgtgactcgttt 693  Q
    ||||||||||||||||    
T  27818291 aacttgtgactcgttt 27818276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 594 - 784
Target Start/End: Complemental strand, 18735556 - 18735370
Alignment:
Q  594 aacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtt 692  Q
    |||||||||||||||| || ||||||   | | ||||||||||||||  |||||||||| ||||||| | || ||||||||||||||||||||||||||     
T  18735556 aacaagtaaattgcaaagacatttaagaaaatgaacttaaattgcattgattgaatgtagattggtacagatattcatacattgcaacttgtgactcgt- 18735458  T
Q  693 tgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
       |||| |||   ||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||| |  || |||||| |||||||||    
T  18735457 ---ttctttcttccatgcggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttttcttaagagaaactactatttatac 18735370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 642 - 784
Target Start/End: Original strand, 22698098 - 22698236
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgat 741  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||||||    ||||||   ||||||||| ||||||| |||||||| ||||||||    
T  22698098 attgactgtaaattggtacacatgttcatacattgcaacttgtgactcgttt----ctctcttccatgcggataatttgagtgtaagttttttgtatgat 22698193  T
Q  742 tgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
     |||||||||||| |||||| |  | ||||||| |||||||||    
T  22698194 agaattgtgacccttttttcctagggaaaactactatttatac 22698236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 554 - 728
Target Start/End: Original strand, 17637779 - 17637949
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaa 652  Q
    |||||| ||||||||||| ||||||||||||||||||   ||||||||||||| || ||||||||||  |  |||| ||||||||||  |||||||||||    
T  17637779 gagattatcttcaaaggaataaagtaaattgcttgaacaaaacaagtaaattgaaatgaaatttaaataaacaaacgtaaattgcattgattgaatgtaa 17637878  T
Q  653 attggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataag 728  Q
    ||||||| ||   |||||||||||  |||||| ||||||    ||||||||| |||||||||||||||||| ||||    
T  17637879 attggtacacggattcatacattgtgacttgttactcgt----ttctctctg-aatgcggatagtttgagtgtaag 17637949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 626 - 751
Target Start/End: Complemental strand, 15337465 - 15337344
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||| ||  |||||||||||||||||| |||| ||||||||||||||||||||||||||    | ||||||   ||||||||| ||||||| |    
T  15337465 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgt----tgctctcttccatgcggataatttgagtgt 15337370  T
Q  726 aagttttctgtatgattgaattgtga 751  Q
    ||||||| |||||||| |||||||||    
T  15337369 aagttttttgtatgatagaattgtga 15337344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 626 - 751
Target Start/End: Complemental strand, 15426530 - 15426409
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||| ||  |||||||||||||||||| |||| ||||||||||||||||||||||||||    | ||||||   ||||||||| ||||||| |    
T  15426530 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgt----tgctctcttccatgcggataatttgagtgt 15426435  T
Q  726 aagttttctgtatgattgaattgtga 751  Q
    ||||||| |||||||| |||||||||    
T  15426434 aagttttttgtatgatagaattgtga 15426409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 626 - 751
Target Start/End: Complemental strand, 15517834 - 15517713
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||| ||  |||||||||||||||||| |||| ||||||||||||||||||||||||||    | ||||||   ||||||||| ||||||| |    
T  15517834 aacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgt----tgctctcttccatgcggataatttgagtgt 15517739  T
Q  726 aagttttctgtatgattgaattgtga 751  Q
    ||||||| |||||||| |||||||||    
T  15517738 aagttttttgtatgatagaattgtga 15517713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 625 - 786
Target Start/End: Original strand, 22698712 - 22698868
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    |||||||||||||||  |||||| |||||||||||  ||| ||||||||||   | |||| |||| |||    |||||| | ||||||||| |||||||     
T  22698712 aaacttaaattgcattgattgaaagtaaattggtatgcatattcatacattttgatttgtaactcattt----ctctct-acatgcggataatttgagtg 22698806  T
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatacta 786  Q
    ||||||||||||||| |||||||||||||| |||||| | ||| ||||| ||||||||||||    
T  22698807 taagttttctgtatggttgaattgtgacccttttttcctatgagaaactgttatttatacta 22698868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 24974056 - 24974142
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaat--gattacttgtaagatcaaccagtaaatcttaggatatattgtg 459  Q
    ||||||||||| |||||||| ||| ||||||| ||| ||||   | ||||||| |||||||||||||||||||||||||||||||||    
T  24974056 tgtttaccttggttttcggtaaacaaccgttgatttccaaaatggtttacttgcaagatcaaccagtaaatcttaggatatattgtg 24974142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 589 - 784
Target Start/End: Original strand, 29708112 - 29708304
Alignment:
Q  589 aaatgaacaagtaaattgcaagaa-atttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| || |||||||| | |  | | |||||||||  ||||||||||| |||||  |||| ||||||||||||||||||||||    
T  29708112 aaataaacaagtaaattgcaaaaacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgcacatattcatacattgcaacttgtgac 29708211  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||| |    || ||   || | || | ||||||  ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  29708212 tcgttag----tcgcttccatacagacaatttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 29708304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 589 - 784
Target Start/End: Original strand, 41438790 - 41438982
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| || |||||||| | |  | | |||||||||  | || |||||| |||||| |||| ||||||||||||||||||||||    
T  41438790 aaataaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgactggatgtaagttggtatacatattcatacattgcaacttgtgac 41438889  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||    |  || ||   || |||||| ||||||  ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  41438890 tcgt----tcatcgcttccatacggatattttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 41438982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 654 - 784
Target Start/End: Original strand, 17426107 - 17426234
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgac 752  Q
    |||||| |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||||||||||    
T  17426107 ttggtacacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgac 17426202  T
Q  753 ccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||| |  ||||||||| |||||||||    
T  17426203 ccatttttcctaagaaaaactactatttatac 17426234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 646 - 784
Target Start/End: Original strand, 22352016 - 22352151
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| |||||||| ||||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  22352016 aatgaaaattggtggacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattga 22352111  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||| |||||||||    
T  22352112 attgtgacccgtttttcctaagaaaaactactatttatac 22352151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 784
Target Start/End: Original strand, 25388985 - 25389120
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  25388985 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagttttgagtatgattga 25389080  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||| ||||||| |  ||||||||| |||||||||    
T  25389081 attgtgaccaatttttcctaagaaaaactactatttatac 25389120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 17637604 - 17637696
Alignment:
Q  374 gtgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    |||||||||||| |||| ||| ||| |||| ||||||| ||||  || |||||| ||||||| |||||||||| ||  |||||||||||||||    
T  17637604 gtgtttaccttggtttttggtaaacaaccgctggtttaaaaatagttgcttgtatgatcaactagtaaatcttggggcatattgtgtttgtta 17637696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 597 - 787
Target Start/End: Original strand, 13764466 - 13764655
Alignment:
Q  597 aagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcataca-ttgcaacttg-tgactcgtttg 694  Q
    |||||||||||||| |||||||| |  |||||| |||||| ||||| ||||||||||||  || |||| |||||||| |||||||||| | ||||||       
T  13764466 aagtaaattgcaaggaatttaaaaggataaactaaaattgtataaa-tgaatgtaaattaatacacatgttcatacatttgcaacttgtttactcgt--- 13764561  T
Q  695 cttctctctgaaatgcggatagttt--gagtataagttttctgtatgattgaattgtgacccatttttcatgtg-aaaaactattatttatactaa 787  Q
     ||||| || ||  |||||||||||  | || |||||||| ||| | ||||||||||||||| |||||| | || ||||||| |||||||||||||    
T  13764562 -ttctc-cttaagcgcggatagtttaagtgtgtaagttttgtgtgtaattgaattgtgacccgtttttcctatgaaaaaactcttatttatactaa 13764655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 419 - 466
Target Start/End: Original strand, 17839812 - 17839859
Alignment:
Q  419 ttacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||||    
T  17839812 ttacttgcaagatcaaccagtaaatcttaggacatattgtctttgtta 17839859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 654 - 784
Target Start/End: Original strand, 20193165 - 20193292
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgac 752  Q
    |||||| |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  |||||| |||||||||||    
T  20193165 ttggtacacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattgtgac 20193260  T
Q  753 ccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||  |  ||||||||| |||||||||    
T  20193261 ccattttttctaagaaaaactactatttatac 20193292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 15912075 - 15911983
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    ||||||| |||||||| ||| ||| |||| ||||||| || | |||| ||| ||||||| |||||||||||| |||| |||||||| ||||||    
T  15912075 tgtttacattgatttttggtaaacaaccgctggtttaaaattaattatttgcaagatcatccagtaaatcttaaggacatattgtgcttgtta 15911983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 447
Target Start/End: Complemental strand, 16778330 - 16778259
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatctta 447  Q
    ||||||||||| |||| | | ||| |||| ||||||||||||| ||||||| ||||||||||||||||| |||    
T  16778330 tgtttaccttggttttag-taaacaaccgctggtttacaaatggttacttgcaagatcaaccagtaaatttta 16778259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 405 - 460
Target Start/End: Complemental strand, 18735753 - 18735697
Alignment:
Q  405 tggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgt 460  Q
    ||||||| ||||| ||||||| |||||||||||||||||||| |||| |||||||||    
T  18735753 tggtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggacatattgtgt 18735697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 725 - 784
Target Start/End: Complemental strand, 22064645 - 22064586
Alignment:
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  22064645 taagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 22064586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 16668026 - 16668092
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||  |||||| |  ||||||||| |||||||||    
T  16668026 ttgagtgtaagtttttagtatgattgaattgtgaccactttttcctaagaaaaactactatttatac 16668092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 22697865 - 22697923
Alignment:
Q  405 tggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgttt 462  Q
    ||||||| ||||  ||||||| |||||||||||||||||||| |||| |||||||||||    
T  22697865 tggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgttt 22697923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 633 - 747
Target Start/End: Complemental strand, 18846895 - 18846786
Alignment:
Q  633 attgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagtttt 732  Q
    |||||||  |||||||||||||| ||| |||  ||||||||||   |||||| ||||||||    |||||| | || |||||||||| ||| ||||||||    
T  18846895 attgcattgattgaatgtaaatttgtacacagattcatacattctgacttgttactcgttt----ctctct-agatacggatagtttaagtgtaagtttt 18846801  T
Q  733 ctgtatgattgaatt 747  Q
    ||||||| |||||||    
T  18846800 ctgtatggttgaatt 18846786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 18847107 - 18847026
Alignment:
Q  386 attttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatc-ttaggatatattgtgtttgtta 466  Q
    ||||| ||| ||| |||| ||||||| || | ||| |||| || ||||||||||||||| || |||||||||||||||||||    
T  18847107 atttttggtaaacaaccgctggtttaaaattaattgcttgcaatatcaaccagtaaatctttgggatatattgtgtttgtta 18847026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 6e-58; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 554 - 831
Target Start/End: Complemental strand, 21550748 - 21550474
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaa 652  Q
    |||||| | ||||||||| ||||||||||  ||||||   |||||||||| ||||| ||||||||||    ||||| ||||||||||  |||||||||||    
T  21550748 gagattattttcaaaggaataaagtaaatatcttgaacgaaacaagtaaactgcaatgaaatttaaatacataaacgtaaattgcattgattgaatgtaa 21550649  T
Q  653 attggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgac 752  Q
    ||||||| |||| |||||||||||  |||||| ||||||||    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||     
T  21550648 attggtacacatattcatacattgtgacttgttactcgttt----ctctctgaa-tgcggatagtttgagtgtaagttttctgtatgattgaattgtgat 21550554  T
Q  753 ccatttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataacta 831  Q
    || |||||| | |||||||||| ||||||||||||||||||| ||||| ||||| |||  ||||||||||||||||||||    
T  21550553 ccgtttttcctatgaaaaactactatttatactaagtaactacctacacagaaatgttcgaacgtaactgctaataacta 21550474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 629 - 753
Target Start/End: Original strand, 4361626 - 4361746
Alignment:
Q  629 ttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataag 728  Q
    |||||||||||  |||||||||||||||||| |||| |||||| |||||||||||| ||||||||    ||||||   ||||||||| ||||||||||||    
T  4361626 ttaaattgcattgattgaatgtaaattggtacacatgttcatatattgcaacttgttactcgttt----ctctcttccatgcggataatttgagtataag 4361721  T
Q  729 ttttctgtatgattgaattgtgacc 753  Q
    |||| ||||||||||||||||||||    
T  4361722 ttttttgtatgattgaattgtgacc 4361746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 626 - 784
Target Start/End: Original strand, 21168326 - 21168479
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  |||||||||| |||| || |||| ||||||||||||||||||||||||||||    ||||||   ||||||||| ||||||| |    
T  21168326 aacttaaattgcattgattgaatgtagattgctacacatattcatacattgcaacttgtgactcgttt----ctctcttccatgcggataatttgagtgt 21168421  T
Q  726 aagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||| ||||||||||||||||||||| ||||   |  ||||||||| |||||||||    
T  21168422 aagtttt-tgtatgattgaattgtgaccctttttcgttaagaaaaactactatttatac 21168479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 626 - 784
Target Start/End: Complemental strand, 27902172 - 27902018
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  |||||||||||||||||| |||| |||||||||||||||||||||||| |    ||||||||   ||| ||||| ||||||| |    
T  27902172 aacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcct----ttctctcttccatgtggataatttgagtgt 27902077  T
Q  726 aagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||| |||||||||| |||||||||  |||  | || ||||||||| |||||||||    
T  27902076 aagttttgtgtatgattggattgtgacctttttcccttgggaaaaactactatttatac 27902018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 626 - 759
Target Start/End: Original strand, 2603465 - 2603594
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtga-ctcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    ||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||| |||||    ||||||||   ||||||||| |||||||     
T  2603465 aacttaaattgcattgattgaatgtaaattggtatacatgttcatacattgcaacttgtgatctcgt----ttctctcttccatgcggataatttgagtt 2603560  T
Q  725 taagttttctgtatgattgaattgtgacccatttt 759  Q
    |||||||| |||||||||||||||| |||| ||||    
T  2603561 taagtttt-tgtatgattgaattgtaacccttttt 2603594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 579 - 783
Target Start/End: Original strand, 16406709 - 16406910
Alignment:
Q  579 aaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgc 677  Q
    ||||||||| |||  |||||||||||||||| || ||||||   | ||||||||||||||||  ||||||||| |||||||| |||| ||||||||||      
T  16406709 aaattgcttaaaagaaacaagtaaattgcaaagacatttaagaaaataaacttaaattgcattgattgaatgtcaattggtacacatgttcatacattat 16406808  T
Q  678 aacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactatta 777  Q
    ||||||||||||||    ||||||||  |||| ||||||||| ||| |||||||  |||||||| |  |||||||   |||||| | |||||||||| ||    
T  16406809 aacttgtgactcgt----ttctctcttgaatgtggatagtttaagtgtaagtttcgtgtatgatcggtttgtgacatgtttttcttatgaaaaactacta 16406904  T
Q  778 tttata 783  Q
    ||||||    
T  16406905 tttata 16406910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 589 - 784
Target Start/End: Complemental strand, 23511801 - 23511609
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| |  |||||||| | |  | |||||||||||  | ||||||||| |||||| |||| ||||||||||||||||||||||    
T  23511801 aaataaacaagtaaattgcaaaggcatttaaagaaatgtatttaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgac 23511702  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||    || || ||   || |||||||||||||  ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  23511701 tcgt----ttatcgcttccatacggatagtttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23511609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 626 - 753
Target Start/End: Complemental strand, 27131859 - 27131736
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  |||| ||||||||||||| |||| |||||||| |||||||||||||||||    ||||||||   ||| ||||| ||||||| |    
T  27131859 aacttaaattgcattgattggatgtaaattggtacacatgttcatacagtgcaacttgtgactcgt----ttctctcttccatgaggataatttgagtgt 27131764  T
Q  726 aagttttctgtatgattgaattgtgacc 753  Q
    ||||||| |||||||| | |||||||||    
T  27131763 aagttttgtgtatgataggattgtgacc 27131736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 642 - 784
Target Start/End: Original strand, 4229856 - 4229994
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgat 741  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||||    || |||||   ||||||||||||||||  |||||| | ||||||||    
T  4229856 attgaatgtaagttggtacacatattcatacattgcaacttgtgactcgt----ttatctcttccatgcggatagtttgagcgtaagttatttgtatgat 4229951  T
Q  742 tgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
     |||||||||||| ||| || |  | ||||||| |||||||||    
T  4229952 agaattgtgacccttttctcctagggaaaactactatttatac 4229994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 589 - 784
Target Start/End: Complemental strand, 21076751 - 21076559
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| || |||||||| | |  | | |||||||||  ||||||||||| |||||| |||| ||||||||||||||||| ||||    
T  21076751 aaataaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatacattgcaacttatgac 21076652  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||  |    || ||   || |||||| ||||||| ||||||||  |||||||||||||||||||  |||||| |  ||||||||| |||||||||    
T  21076651 tcgtcag----tcgcttccatacggataatttgagtgtaagtttttagtatgattgaattgtgaccattttttcctaagaaaaactactatttatac 21076559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 22508930 - 22509046
Alignment:
Q  575 aagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcataca- 673  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||||   |||| ||||||||||||| |||||||||||||||| |||  ||||||||     
T  22508930 aagtaaattgctagaaa-gaacaagtaaattgcaaggaatttaaagg-gaaaacctaaattgcataaa-tgaatgtaaattggtacacagattcatacat 22509026  T
Q  674 ttgcaacttgtgactcgttt 693  Q
    |||||| |||| ||||||||    
T  22509027 ttgcaaattgttactcgttt 22509046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 784
Target Start/End: Complemental strand, 50826564 - 50826378
Alignment:
Q  594 aacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtt 692  Q
    |||||||||||||||| || |||||||| | | ||||||||||||||  ||||||||||| || ||  |||  |||||| |||||||| ||||||||||     
T  50826564 aacaagtaaattgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttagtgcacagattcatagattgcaacctgtgactcgt- 50826466  T
Q  693 tgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
       ||||| ||   |  |||||| ||||||| |||||||| |||||||||||||||| |||| |||||| |  |||||| ||||||||||||    
T  50826465 ---ttctcgcttccaaacggataatttgagtgtaagtttt-tgtatgattgaattgtaacccttttttcctaagaaaaattattatttatac 50826378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 631 - 784
Target Start/End: Complemental strand, 21137803 - 21137654
Alignment:
Q  631 aaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagtt 730  Q
    |||||||||  | ||||||||| |||||| |||| ||||||||||||||||||||||||||    || || ||   || |||||||||||||  ||||||    
T  21137803 aaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgt----ttatcgcttccatacggatagtttgagcgtaagtt 21137708  T
Q  731 ttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||  ||||||||||||||||| |  |||||| |  ||||||||| |||||||||    
T  21137707 tttagtatgattgaattgtgaacagtttttcctaagaaaaactactatttatac 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 626 - 759
Target Start/End: Original strand, 21382026 - 21382155
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  || |||| || ||||||| |||| ||||||||||| ||||||||||||||||    ||||||   ||||| ||| ||||||| |    
T  21382026 aacttaaattgcattgatcgaatatagattggtacacatgttcatacattgtaacttgtgactcgttt----ctctcttccatgcgaataatttgagtgt 21382121  T
Q  726 aagttttctgtatgattgaattgtgacccatttt 759  Q
    ||| ||| ||||||||||||| ||||||| ||||    
T  21382122 aagctttttgtatgattgaatcgtgacccctttt 21382155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 631 - 784
Target Start/End: Original strand, 31845645 - 31845795
Alignment:
Q  631 aaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagt 729  Q
    |||||||| | ||| |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| |||||    
T  31845645 aaattgcaaagatttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagt 31845740  T
Q  730 tttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  31845741 tttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 31845795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 784
Target Start/End: Complemental strand, 21310931 - 21310728
Alignment:
Q  579 aaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgc 677  Q
    ||||| ||| ||||||| ||||||||||||| || |||||||| | |  | | |||||||||  | |||||  || |||||  |||| ||||||||||||    
T  21310931 aaattacttaaaatgaataagtaaattgcaaagacatttaaagaaatgtattgaaattgcatggactgaataaaagttggtgcacatgttcatacattgc 21310832  T
Q  678 aacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactatt 776  Q
    ||||| |||||||||||    || ||   || |||| ||| |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |    
T  21310831 aacttctgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactact 21310736  T
Q  777 atttatac 784  Q
    ||||||||    
T  21310735 atttatac 21310728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 29305352 - 29305217
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  29305352 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattga 29305257  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||| |||||||||    
T  29305256 attgtgacccgtttttcctaagaaaaactactatttatac 29305217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 725 - 784
Target Start/End: Complemental strand, 22086457 - 22086398
Alignment:
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||  ||||||||||||||||||||||||||| |  ||||||||| |||||||||    
T  22086457 taagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 22086398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 21168097 - 21168155
Alignment:
Q  405 tggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgttt 462  Q
    ||||||| ||||| ||||||| |||||||||||||||||||| |||| |||||||||||    
T  21168097 tggtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggacatattgtgttt 21168155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 784
Target Start/End: Original strand, 22809065 - 22809200
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| ||||||||||||||||||||| | ||  |    || |||| ||| |||||| ||||||||  ||||||||||    
T  22809065 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgttgcttcc----atacggacagtattgagtgtaagtttttagtatgattga 22809160  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||| | |||||||||    
T  22809161 attgtgacccgtttttcctaagaaaaaccactatttatac 22809200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 707 - 752
Target Start/End: Complemental strand, 18530622 - 18530577
Alignment:
Q  707 atgcggatagtttgagtataagttttctgtatgattgaattgtgac 752  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||    
T  18530622 atgcggatagtttgagtgtaagttttttgtatggttgaattgtgac 18530577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 462
Target Start/End: Complemental strand, 18530918 - 18530859
Alignment:
Q  403 gttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgttt 462  Q
    ||||||||| || | |||||| | ||||||||||| |||||||||||| |||||||||||    
T  18530918 gttggtttaaaattaattactagcaagatcaaccaataaatcttaggacatattgtgttt 18530859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 776
Target Start/End: Original strand, 22509060 - 22509126
Alignment:
Q  712 gatagtttgagtat--aagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactatt 776  Q
    |||||||||||| |  ||||||| ||||||||||||||||||||  |||||| | ||||||||||||    
T  22509060 gatagtttgagtgtgtaagttttgtgtatgattgaattgtgacctgtttttcgtatgaaaaactatt 22509126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 1528720 - 1528786
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||  |||||||||    
T  1528720 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcgtaagaaaaacttctatttatac 1528786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 16406536 - 16406598
Alignment:
Q  405 tggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    ||||||| || | |||||||| |||||||||||||||||||| |||  |||||||||||||||    
T  16406536 tggtttaaaattaattacttgcaagatcaaccagtaaatcttaaggtcatattgtgtttgtta 16406598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 462
Target Start/End: Original strand, 41368404 - 41368446
Alignment:
Q  421 acttgtaagatcaaccagtaaatcttagga-tatattgtgttt 462  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  41368404 acttgcaagatcaaccagtaaatcttaggagtatattgtgttt 41368446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 2e-54; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 375 - 674
Target Start/End: Original strand, 26835986 - 26836284
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgttannnnnnna 474  Q
    ||||||||||||||||| || |   |||| ||||||||||||| ||||||| |||||||||||||||||||||||| |||| ||||||||||       |    
T  26835986 tgtttaccttgattttccgtaattaaccgctggtttacaaatggttacttgcaagatcaaccagtaaatcttaggacatatcgtgtttgttattttcc-a 26836084  T
Q  475 gaaaatgatgaannnnnnngatattttagtgtaggattatgaatataatcatcgaatccnnnnnnnnttgaattctgctgagattgtcttcaaaggatta 574  Q
    ||||||||||||       |||||||| ||  || | ||||||||||| | ||||||||        |||||||| |  |||||| |||||| |||||||    
T  26836085 gaaaatgatgaatgttcttgatatttttgtacagaaatatgaatataaccgtcgaatccaacgaagattgaattcagtcgagattatcttcagaggatta 26836184  T
Q  575 aagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacat 674  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| || |||  |||||||||    
T  26836185 aagtaaattgcttgaaaggaacaagtaaattgctaggaatttaaaggaataaacttaaattgcataaattgaatgtaaattgatacacagattcatacat 26836284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 554 - 872
Target Start/End: Original strand, 20249155 - 20249451
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaa 653  Q
    |||||| ||||||||||||||| |||||  |||||| |  ||||||||| ||||||| ||||| ||||| | |||||| ||| |||||||||||||||||    
T  20249155 gagattatcttcaaaggattaatgtaaaaagcttgataaaaacaagtaatttgcaaggaatttgaaggaatgaacttacatttcataaattgaatgtaaa 20249254  T
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacc 753  Q
    || ||| |||  |||||||||||  |||||| || |||||    ||||||||| || |||||||||||||||||||||| |||||||||| ||           
T  20249255 ttagtacacagattcatacattgtgacttgttacccgttt----ctctctgaa-tgtggatagtttgagtataagttttttgtatgattgtat------- 20249342  T
Q  754 catttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgttt-aacgtaactgctaataactacccaagatacatcttaattaa 852  Q
            |||   |||||||||||||||| |||||||||| ||||| |||||||||  |||||||||||||||||||||| |||||||||||||||| |    
T  20249343 --------atg---aaaactattatttatattaagtaactacctacatagaaacgttcgaacgtaactgctaataactacctaagatacatcttaattga 20249431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 575 - 834
Target Start/End: Original strand, 17432587 - 17432844
Alignment:
Q  575 aagtaaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcataca- 673  Q
    |||||||||||| |||| ||| |||||||||||||| |||||||||   |||||||||||||||||||||||||||||||||||| |||  ||||||||     
T  17432587 aagtaaattgctagaaa-gaataagtaaattgcaaggaatttaaagagataaacttaaattgcataaattgaatgtaaattggtacacagattcatacat 17432685  T
Q  674 ttgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttga--gtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaa 771  Q
    |||  |||||| ||||||    ||||| ||  ||||| ||||||||||  || |||||||| ||| |||||||||||||| || ||||| || |||||||    
T  17432686 ttgttacttgttactcgt----ttctc-cttgaatgcagatagtttgagtgtgtaagttttgtgtgtgattgaattgtgaaccgtttttaatatgaaaaa 17432780  T
Q  772 ctattatttatactaagtaactatctacaaagaaac-gtttaacgtaactgctaataactaccc 834  Q
    |||||||||||||||| |||||  ||| | |||||| ||  ||  |||||||||||||||||||    
T  17432781 ctattatttatactaaataactgcctatacagaaacagtcgaatataactgctaataactaccc 17432844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 629 - 751
Target Start/End: Complemental strand, 16832259 - 16832141
Alignment:
Q  629 ttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataag 728  Q
    |||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||||    ||||||||  |||||||||| ||||||| ||||    
T  16832259 ttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgt----ttctctcttcaatgcggataatttgagtgtaag 16832164  T
Q  729 ttttctgtatgattgaattgtga 751  Q
    |||| |||||||||| |||||||    
T  16832163 ttttgtgtatgattggattgtga 16832141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 594 - 784
Target Start/End: Original strand, 20024401 - 20024587
Alignment:
Q  594 aacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtt 692  Q
    |||||||||||||||| || ||||||   | | |||||||| |||||  |||||||||| ||||||| |||| |||||||||||||||||||||||||||    
T  20024401 aacaagtaaattgcaaagacatttaagaaaatgaacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttgtgactcgtt 20024500  T
Q  693 tgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |    ||||||   ||||||||| ||||||| |||||||| ||||||||||||||||||||| |||| | |  || |||||| |||||||||    
T  20024501 t----ctctcttccatgcggataatttgagtgtaagtttt-tgtatgattgaattgtgaccctttttccttaagagaaactactatttatac 20024587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 626 - 753
Target Start/End: Complemental strand, 18156297 - 18156174
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  ||||||| |||||||||| |||  ||||||||||||||||||||||||||    ||||||||   ||||||||| ||||||| |    
T  18156297 aacttaaattgcattgattgaatataaattggtacacagattcatacattgcaacttgtgactcgt----ttctctcttccatgcggataatttgagtgt 18156202  T
Q  726 aagttttctgtatgattgaattgtgacc 753  Q
    ||||||| |||||||||| |||||||||    
T  18156201 aagttttgtgtatgattggattgtgacc 18156174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 577 - 782
Target Start/End: Complemental strand, 19212578 - 19212377
Alignment:
Q  577 gtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacatt 675  Q
    ||||| |||| |||| ||||||||||||||||| | ||||||||| |  |||||||||||||||  |||||||||||||||||| |||  ||| ||||||    
T  19212578 gtaaaatgctcgaaaagaacaagtaaattgcaaaggaatttaaagaaacaaacttaaattgcattgattgaatgtaaattggtacacagattcgtacatt 19212479  T
Q  676 gcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactat 775  Q
       |  ||| ||||||||     ||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||  |||||| | |||||||||      
T  19212478 ttgatgtgtaactcgttta----tctct-aaatgcggatagtttgagtgtaagttttttatatgattgaattgtgacctgtttttcctatgaaaaactga 19212384  T
Q  776 tatttat 782  Q
    |||||||    
T  19212383 tatttat 19212377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 626 - 784
Target Start/End: Complemental strand, 40933032 - 40932878
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||| ||  |||||||||||||||||| |||| ||||||||||||||||||||||||||    || |||||   |||| |||| ||||||| |    
T  40933032 aacttaaattgtattgattgaatgtaaattggtacacatattcatacattgcaacttgtgactcgt----ttatctcttccatgcagataatttgagtgt 40932937  T
Q  726 aagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
     |||||| |||||||| |||||||||||| |||| | |  | ||||||| |||||||||    
T  40932936 tagttttttgtatgatagaattgtgaccctttttccctagggaaaactactatttatac 40932878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 625 - 786
Target Start/End: Original strand, 19859560 - 19859716
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    |||||||||||||||  |||||||||||||||||| |||  |||||||||||  |||||| ||||||||    |||| | | |||  ||||||||||||     
T  19859560 aaacttaaattgcattgattgaatgtaaattggtacacaaattcatacattgggacttgtaactcgttt----ctcttt-agatgttgatagtttgagtg 19859654  T
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatacta 786  Q
    ||||||||||||||  |||||||||||||| |||||| | ||| |||||  |||||||||||    
T  19859655 taagttttctgtattgttgaattgtgacccgtttttcctatgagaaactgatatttatacta 19859716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 642 - 761
Target Start/End: Complemental strand, 10624442 - 10624328
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgat 741  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||| |    || |||||   ||||||||| ||||||| |||||||| ||||||||    
T  10624442 attgaatgtaaattggtacacatgttcatacattgcaacttgtgactcat----ttatctcttccatgcggataatttgagtgtaagtttt-tgtatgat 10624348  T
Q  742 tgaattgtgacccatttttc 761  Q
     |||||||||||| ||||||    
T  10624347 agaattgtgacccttttttc 10624328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 375 - 465
Target Start/End: Original strand, 20248977 - 20249067
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtt 465  Q
    |||||||| | ||||| ||| ||| |||| ||||||||||||||||||||| |||||||| |||||||||||| || | ||| ||||||||    
T  20248977 tgtttaccataatttttggtaaacaaccgctggtttacaaatgattacttgcaagatcaagcagtaaatcttaagacaaattttgtttgtt 20249067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 21530438 - 21530303
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||||||| |||||| ||||||||  ||||||||||    
T  21530438 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggatagtattgagtgtaagtttttagtatgattga 21530343  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||  |||||||||    
T  21530342 attgtgacccgtttttcctaagaaaaacttctatttatac 21530303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 810
Target Start/End: Original strand, 26855570 - 26855669
Alignment:
Q  710 cggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgt 809  Q
    |||||||||||||| |||| ||| |||||| ||||||| | | |  |||||| | ||||||| || ||||||||||||||||||| ||||| ||||||||    
T  26855570 cggatagtttgagtttaaggtttttgtatgtttgaattatcatct-tttttcctatgaaaaaatactatttatactaagtaactacctacacagaaacgt 26855668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 18156520 - 18156458
Alignment:
Q  405 tggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    ||||||| ||||  ||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  18156520 tggtttaaaaatagttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgtta 18156458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 784
Target Start/End: Original strand, 26274096 - 26274231
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  26274096 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcacttccatacggacagtattgagtgtaagtttttagtatgattga 26274191  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||  |||||||||    
T  26274192 attgtgacccgtttttcctaagaaaaacttctatttatac 26274231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 718 - 783
Target Start/End: Original strand, 21982681 - 21982746
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttata 783  Q
    |||||| ||||||||  ||||||||||||||||||| ||||||| |  ||||||||| ||||||||    
T  21982681 ttgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatttata 21982746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 20506387 - 20506453
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||  |||||| |  ||||||||| |||||||||    
T  20506387 ttgagtgtaagttttgagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 20506453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 746 - 784
Target Start/End: Original strand, 21390786 - 21390824
Alignment:
Q  746 ttgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  21390786 ttgtgacctatttttcatatgaaaaactattatttatac 21390824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 21504702 - 21504636
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||  |||||||||    
T  21504702 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 21504636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 19212779 - 19212686
Alignment:
Q  374 gtgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttag-gatatattgtgtttgtta 466  Q
    |||||||||||||| || ||| ||| |||| || |||| || |  ||| ||| |||||| ||||||||||||| | ||||||||||||||||||    
T  19212779 gtgtttaccttgatctttggtaaacaaccgctgatttaaaattagttatttgcaagatcgaccagtaaatctttgagatatattgtgtttgtta 19212686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 106; Significance: 2e-52; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 405 - 693
Target Start/End: Original strand, 43433 - 43720
Alignment:
Q  405 tggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgttannnnnnnagaaaatgatgaannnnnnngatattttagt 504  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| || |||||||||||||||       |||||||||||||       |||||||| ||    
T  43433 tggtttacaaatggttacttgcaagatcaaccagtaaatcttaagacatattgtgtttgttattttcc-agaaaatgatgaatgttcttgatatttttgt 43531  T
Q  505 gtaggattatgaatataatcatcgaatccnnnnnnnnttgaattctgctgagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaat 604  Q
      || | ||||||||||| ||||||||||        |||||||| |  |||||| |||| | |||||||||||||||||||||||| ||||||||||||    
T  43532 acagaaatatgaatataaccatcgaatccaacaaagattgaattcagtcgagattatcttgagaggattaaagtaaattgcttgaaaggaacaagtaaat 43631  T
Q  605 tgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgttt 693  Q
    | | || ||||||||||| |||||||||||||||||||||||||||||||||||| |||  ||||||||| |  |||||| ||||||||    
T  43632 ttctaggaatttaaaggaataaacttaaattgcataaattgaatgtaaattggtacacagattcatacatcgagacttgttactcgttt 43720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 97; Significance: 4e-47; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 554 - 832
Target Start/End: Original strand, 25662 - 25937
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaa-ttgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgta 651  Q
    |||||| ||||||||||| ||||||||||||||||||   |||||||||| |||||| |||||||||| ||  |||| ||||||||||  ||| || |||    
T  25662 gagattatcttcaaaggaataaagtaaattgcttgaaga-aacaagtaaaattgcaatgaaatttaaatgaacaaacgtaaattgcatttattaaacgta 25760  T
Q  652 aattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtga 751  Q
    |||||||| |||  |||||||||||  |||||| |||| |||    |||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  25761 aattggtacacagattcatacattgtgacttgttactcattt----ctctct-aaatgcggataatttaagtgtaagttttctgtatgattgaattgtga 25855  T
Q  752 cccatttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataactac 832  Q
    ||| |||||| | |||||||||| ||||||||||||||||||| ||||| |||||  ||  || ||||||||||||||||||    
T  25856 cccgtttttcctatgaaaaactactatttatactaagtaactacctacacagaaatattcaaatgtaactgctaataactac 25937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 25483 - 25575
Alignment:
Q  374 gtgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    |||||||||||| |||| ||| ||| || | ||||||| ||||  ||||||| ||| ||||||||||||||||| || |||||||||||||||    
T  25483 gtgtttaccttggtttttggtaaacaactgctggtttaaaaatagttacttgcaagttcaaccagtaaatcttaagacatattgtgtttgtta 25575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 573 - 786
Target Start/End: Original strand, 8709 - 8919
Alignment:
Q  573 taaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcata 671  Q
    ||||||||||||||| |||  |||||||||||||||| || ||||||  || ||||||||||||||||  |||||||||||||||||| |||| ||||||    
T  8709 taaagtaaattgcttaaaagaaacaagtaaattgcaaagacatttaagagaataaacttaaattgcattgattgaatgtaaattggtacacatgttcata 8808  T
Q  672 cattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaa 771  Q
    ||||| ||||||||||||||    ||||||||  |||| ||||||||||||| |||||||| |||||||||| |||||||||| |||| | | || ||||    
T  8809 cattgtaacttgtgactcgt----ttctctcttgaatgtggatagtttgagtgtaagttttgtgtatgattggattgtgacccgttttccttatggaaaa 8904  T
Q  772 ctattatttatacta 786  Q
    ||| |||||||||||    
T  8905 ctactatttatacta 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1496 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 554 - 831
Target Start/End: Complemental strand, 1621 - 1348
Alignment:
Q  554 gagattgtcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaa 652  Q
    |||||| |||| || ||| ||||||||||||||||||   |||||||||||||||| ||||||||||  |  ||| | ||||||||   |||||||||||    
T  1621 gagattatctttaatggaataaagtaaattgcttgaagaaaacaagtaaattgcaatgaaatttaaataacaaaagt-aaattgcaatgattgaatgtaa 1523  T
Q  653 attggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgac 752  Q
    ||||||| |||  ||||||||||   |||||| ||||||||    ||||| ||| ||| |||||||||||| ||||||||| ||||||||||||||||||    
T  1522 attggtacacagattcatacattctgacttgttactcgttt----ctctccgaa-tgcagatagtttgagtgtaagttttccgtatgattgaattgtgac 1428  T
Q  753 ccatttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataacta 831  Q
    || |||||| | |||||||||| ||||||||||||||||||| ||||| |||||| ||  ||||||||| ||| ||||||    
T  1427 ccgtttttcttatgaaaaactactatttatactaagtaactacctacacagaaactttcaaacgtaactactagtaacta 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 87; Significance: 3e-41; HSPs: 3)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 555 - 832
Target Start/End: Complemental strand, 5757 - 5492
Alignment:
Q  555 agattgtcttcaaaggattaaagtaaattgctt-gaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaa 653  Q
    ||||| |||| ||||| |||| ||||||||||| |||| |||||||||||||||||| ||||||||||| |||| |||||||          ||||||||    
T  5757 agattatctttaaagggttaacgtaaattgctttgaaaagaacaagtaaattgcaaggaatttaaaggaataaatttaaatta---------aatgtaaa 5667  T
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacc 753  Q
    |||||| |||  ||  |||||||  |||||| |||| |    ||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  5666 ttggtacacagattactacattgtgacttgttactcat----ttctctctg-aatgcggatagtttgagtgtaagttttctatatgattgaattgtgacc 5572  T
Q  754 catttttcatgtgaaaaactattatttatactaagtaactatctacaaagaaacgtt-taacgtaactgctaataactac 832  Q
    | |||||||| |||||||||| ||| |||| |||||||||| ||||| ||| |||||  ||||| |||||||||||||||    
T  5571 cgtttttcatatgaaaaactactatctataataagtaactacctacacagagacgttcgaacgttactgctaataactac 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 580 - 694
Target Start/End: Original strand, 16928 - 17043
Alignment:
Q  580 aattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgca 678  Q
    |||| ||| ||||||||||||||||||||| || |||||||| | |  | | |||||||||  ||||||||||| |||||  |||| |||||||||||||    
T  16928 aattacttaaaatgaacaagtaaattgcaaagacatttaaagaaatgtagtgaaattgcattgattgaatgtaagttggtgcacatgttcatacattgca 17027  T
Q  679 acttgtgactcgtttg 694  Q
    ||||||||||||||||    
T  17028 acttgtgactcgtttg 17043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 553 - 734
Target Start/End: Complemental strand, 169 - 1
Alignment:
Q  553 tgagattgtcttcaaaggattaaagtaaattgctt-gaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgta 651  Q
    ||||||| |||| ||||| |||| ||||||| ||| |||| |||||||||||||||||| ||||||||||| |||| |         |||||| ||||||    
T  169 tgagattatctttaaagggttaatgtaaattactttgaaaagaacaagtaaattgcaaggaatttaaaggaataaatt---------taaattaaatgta 79  T
Q  652 aattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttct 734  Q
    |||||||| |||  ||| |||||||  |||||| |||| |    ||||||||| |||||||||||||||||| ||||||||||    
T  78 aattggtacacagattcctacattgtgacttgttactcat----ttctctctg-aatgcggatagtttgagtgtaagttttct 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 87; Significance: 3e-41; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 578 - 828
Target Start/End: Original strand, 31158 - 31404
Alignment:
Q  578 taaattgcttgaaatgaacaagtaaattgcaagaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgc 677  Q
    ||||||| |||||| ||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||| |||  |||||||||||     
T  31158 taaattgtttgaaaagaacaagtaaattggcaggaatttaaaggaataaacttaaattgcataaattgaatgtaaattggtacacagattcatacattgt 31257  T
Q  678 aacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactatta 777  Q
     | |||| || |||    |||||| || |||| ||||||||||||| | ||||||||||||||||||| | ||||   |||||| |  ||||||||| ||    
T  31258 gatttgttacgcgt----ttctctttg-aatgtggatagtttgagtgttagttttctgtatgattgaactctgacatgtttttcctaagaaaaactacta 31352  T
Q  778 tttatactaagtaactatctacaaagaaac-gtttaacgtaactgctaataa 828  Q
    ||||||| ||||||||| ||||| ||| || ||  |||||||||||||||||    
T  31353 tttatacaaagtaactagctacatagatacggtcgaacgtaactgctaataa 31404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 419 - 466
Target Start/End: Original strand, 28838 - 28885
Alignment:
Q  419 ttacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  28838 ttacttgcaagatcaaccagtaaatcttaggacatattgtgtttgtta 28885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 561 - 832
Target Start/End: Original strand, 539 - 812
Alignment:
Q  561 tcttcaaaggattaaagtaaattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggta 659  Q
    ||||||||||| | ||||||||| ||||||| ||||||||||||||||| | ||||||||| | ||||| ||||||||||  || |||||||||| ||||    
T  539 tcttcaaaggaatgaagtaaatttcttgaaaagaacaagtaaattgcaatggaatttaaagaaataaacataaattgcattgatcgaatgtaaatcggta 638  T
Q  660 gacattttcatacattgcaacttgtg-actcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccattt 758  Q
     |||  |||||||||||  ||||||  |||  |||    | ||||||  |||||||||||||||| |||||||| ||||||| ||||||||||||  |||    
T  639 cacagattcatacattgtgacttgtttactatttt----cactctgag-tgcggatagtttgagtgtaagttttttgtatgactgaattgtgacctgttt 733  T
Q  759 ttcatgtgaaaaactattatttatactaagtaactat----ctacaaagaaacgtt-taacgtaactgctaataactac 832  Q
    | | | |||||||||| |||||||||| |||||||||    |||||||||||||||  |||||||||||||||||||||    
T  734 tccctatgaaaaactactatttatactcagtaactatctacctacaaagaaacgttcgaacgtaactgctaataactac 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 466
Target Start/End: Original strand, 399 - 447
Alignment:
Q  419 ttacttgtaagatcaaccagtaaatc-ttaggatatattgtgtttgtta 466  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  399 ttacttgcaagatcaaccagtaaatctttaggacatattgtgtttgtta 447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 626 - 784
Target Start/End: Original strand, 1387 - 1541
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||||||    ||||||   ||||||||| ||||||| |    
T  1387 aacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttt----ctctcttccatgcggataatttgagtgt 1482  T
Q  726 aagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||| ||||||||||| ||||||||| |||| | |  ||||||||| |||||||||    
T  1483 aagttttttgtatgattgacttgtgaccctttttccttaggaaaaactactatttatac 1541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 1137 - 1229
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    ||||||| |||||||| ||| ||| |||  ||||||| ||||  ||||||| ||||||||| |||||||||| |||| |||||||||||||||    
T  1137 tgtttacattgatttttggtaaacaaccactggtttaaaaatatttacttgcaagatcaactagtaaatcttaaggacatattgtgtttgtta 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 66; Significance: 1e-28; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 626 - 784
Target Start/End: Complemental strand, 70788 - 70634
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  | |||||||||||||||| |||| ||||||||||||||||||||||||||||    ||||||   ||||||||| ||||||| |    
T  70788 aacttaaattgcattgactgaatgtaaattggtaaacatgttcatacattgcaacttgtgactcgttt----ctctcttccatgcggataatttgagtgt 70693  T
Q  726 aagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||| || |||||||||||||||||| || |||| | | || ||||||| |||||||||    
T  70692 aagtattttgtatgattgaattgtgatccgttttccctatggaaaactactatttatac 70634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 71013 - 70959
Alignment:
Q  407 gtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgt 460  Q
    ||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  71013 gtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggatatattgtgt 70959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 4e-28; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 626 - 787
Target Start/End: Original strand, 26460569 - 26460726
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||||    || |||||   ||||||||| ||||||| |    
T  26460569 aacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgt----ttatctcttccatgcggataatttgagtgt 26460664  T
Q  726 aagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatactaa 787  Q
    ||||||| |||||||||| |||||||||  |||  | || || |||||| ||||||||||||    
T  26460665 aagttttgtgtatgattggattgtgaccactttcccttgcgagaaactactatttatactaa 26460726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 624 - 787
Target Start/End: Original strand, 19272293 - 19272451
Alignment:
Q  624 taaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagt 723  Q
    ||||||||||||||||  |||||||||||||||||| |||| ||||||||| ||||||||||||||||||    ||||||   |||| |||| |||||||    
T  19272293 taaacttaaattgcattgattgaatgtaaattggtacacatgttcatacat-gcaacttgtgactcgttt----ctctcttccatgcagataatttgagt 19272387  T
Q  724 ataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatactaa 787  Q
     |||||||| |||||||||| |||||||||  ||| || || || |||||| ||||||||||||    
T  19272388 gtaagttttgtgtatgattggattgtgaccgttttctcttgcgagaaactactatttatactaa 19272451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 626 - 784
Target Start/End: Complemental strand, 11794254 - 11794100
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||| ||  ||||||||||| |||||| |||| ||||||||||||||||||||| ||||    || | |||   ||||||||| ||||||| |    
T  11794254 aacttaaattgtattgattgaatgtaagttggtacacatgttcatacattgcaacttgtgattcgt----ttatatcttccatgcggataatttgagtgt 11794159  T
Q  726 aagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    || |||| ||||| ||||||||||||||| |||||| | || ||||||| |||||||||    
T  11794158 aaattttttgtataattgaattgtgacccttttttcctatggaaaactactatttatac 11794100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 626 - 760
Target Start/End: Original strand, 18258088 - 18258218
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||| ||  ||||||||||||||| || |||| ||||||||||||||||||||||||||||    ||||||   ||||||||| ||||||| |    
T  18258088 aacttaaattgtattgattgaatgtaaattgatacacatgttcatacattgcaacttgtgactcgttt----ctctctttcatgcggataatttgagtgt 18258183  T
Q  726 aagttttctgtatgattgaattgtgacccattttt 760  Q
    || |||| ||||| | ||||||||||||| |||||    
T  18258184 aacttttttgtattaatgaattgtgaccctttttt 18258218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 626 - 749
Target Start/End: Original strand, 16597229 - 16597348
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||| ||||||    |||| |||   ||||||||| ||||||| |    
T  16597229 aacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtcactcgt----ttctttcttccatgcggataatttgagtgt 16597324  T
Q  726 aagttttctgtatgattgaattgt 749  Q
    ||||||| | |||||||| |||||    
T  16597325 aagttttttatatgattggattgt 16597348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 654 - 784
Target Start/End: Complemental strand, 23496674 - 23496547
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgac 752  Q
    |||||| |||| ||||||| |||||||||||||||||||||    || ||   || |||||||| |||||| ||||||||  ||||||||||||||||||    
T  23496674 ttggtacacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgac 23496579  T
Q  753 ccatttttcatgtgaaaaactattatttatac 784  Q
    || |||||| |  ||||||||| |||||||||    
T  23496578 ccgtttttcctaagaaaaactactatttatac 23496547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 784
Target Start/End: Complemental strand, 23491076 - 23490949
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgac 752  Q
    |||||| |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||||||||||    
T  23491076 ttggtacacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggaaagtattgagtgtaagtttttagtatgattgaattgtgac 23490981  T
Q  753 ccatttttcatgtgaaaaactattatttatac 784  Q
    || |||||| |  ||||||||| |||||||||    
T  23490980 ccgtttttcctaagaaaaactactatttatac 23490949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 16596975 - 16597068
Alignment:
Q  374 gtgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    ||||||||  ||||||| ||| ||  |||| ||||||| ||||  ||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  16596975 gtgtttacactgatttttggtaaataaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttgtta 16597068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 659
Target Start/End: Complemental strand, 19084798 - 19084718
Alignment:
Q  580 aattgcttgaaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggta 659  Q
    ||||||||||||| |||||||||||||||| || | ||||   | ||||||||||||||||  ||||||||||||||||||    
T  19084798 aattgcttgaaataaacaagtaaattgcaaagacaattaagaaaataaacttaaattgcattgattgaatgtaaattggta 19084718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 707 - 787
Target Start/End: Complemental strand, 20440808 - 20440728
Alignment:
Q  707 atgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatactaa 787  Q
    ||||||||||||||||| |||||||||| ||||| || |||||||||  |||| | | ||| ||||| |||||||||||||    
T  20440808 atgcggatagtttgagtgtaagttttctatatgaatgtattgtgacctcttttccctatgagaaactgttatttatactaa 20440728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 661 - 784
Target Start/End: Original strand, 19405800 - 19405920
Alignment:
Q  661 acattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgacccatttt 759  Q
    |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  |||||||||||||||||||| ||||    
T  19405800 acatgttcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttt 19405895  T
Q  760 tcatgtgaaaaactattatttatac 784  Q
    || |  ||||||||| |||||||||    
T  19405896 tcctaagaaaaactactatttatac 19405920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 784
Target Start/End: Original strand, 19025389 - 19025524
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  19025389 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattga 19025484  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||  |||||||||    
T  19025485 attgtgacccgtttttcttaagaaaaacttctatttatac 19025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 23431975 - 23431909
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  23431975 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23431909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 30755597 - 30755663
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  30755597 ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 30755663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 707 - 784
Target Start/End: Complemental strand, 20434453 - 20434376
Alignment:
Q  707 atgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||| ||||||||||||||||||||||| ||||| ||  ||||||||  |||| | | ||||||||| ||||||||||    
T  20434453 atgctgatagtttgagtataagttttctatatgaatgtgttgtgacctcttttccctatgaaaaactgttatttatac 20434376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 707 - 787
Target Start/End: Complemental strand, 20438185 - 20438105
Alignment:
Q  707 atgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatactaa 787  Q
    |||||| |||||||||| |||||||||| ||||| || |||||||||  |||| | | ||| ||||| |||||||||||||    
T  20438185 atgcgggtagtttgagtgtaagttttctatatgaatgtattgtgacctcttttccctatgagaaactgttatttatactaa 20438105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 19272069 - 19272136
Alignment:
Q  400 accgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    |||| ||||||| ||||  ||||||| |||||||| ||||||||||| |||| |||||||||||||||    
T  19272069 accgctggtttaaaaatatttacttgcaagatcaatcagtaaatcttaaggacatattgtgtttgtta 19272136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 1557751 - 1557817
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||  |||||| |  ||||||||| |||||||||    
T  1557751 ttgagtgtaagttttgagtatgattgaattgtgacctctttttcctaagaaaaactactatttatac 1557817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 16209858 - 16209792
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  ||||||||||| |||||||| |||||| |  ||||||||| |||||||||    
T  16209858 ttgagtgtaagtttttagtatgattgaactgtgacccgtttttcctaagaaaaactactatttatac 16209792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 19038501 - 19038567
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||  |||||||||    
T  19038501 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatac 19038567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 63; Significance: 7e-27; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 625 - 784
Target Start/End: Original strand, 101986 - 102140
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    ||||||||| |||||  |||||||||| ||||||| |||| ||||||||||||||||| ||||||||||    ||||||   ||||||||| |||||||     
T  101986 aaacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttttgactcgttt----ctctcttccatgcggataatttgagtg 102081  T
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||| ||||||||||||||||||||| |||| | |  || ||||||||||||||||    
T  102082 taagtttt-tgtatgattgaattgtgaccctttttccttaagagaaactattatttatac 102140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 101790 - 101849
Alignment:
Q  402 cgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgt 460  Q
    |||||||||| ||||| ||||||| |||||||||||||||||||| |||| |||||||||    
T  101790 cgttggtttaaaaatgtttacttggaagatcaaccagtaaatcttaaggacatattgtgt 101849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 62; Significance: 3e-26; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 642 - 784
Target Start/End: Original strand, 14143 - 14280
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgat 741  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||    ||||||   ||||||||| ||||||| |||||||| ||||||||    
T  14143 attgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttt----ctctcttccatgcggataatttgagtgtaagtttt-tgtatgat 14237  T
Q  742 tgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||||||| |||| | |  | ||||||| |||||||||    
T  14238 tgaattgtgaccctttttccttagggaaaactactatttatac 14280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 462
Target Start/End: Original strand, 13862 - 13950
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgttt 462  Q
    |||||||  ||| ||| ||| ||| |||| ||||||| ||||  ||||||| |||||||||||||||||||| |||| |||||||||||    
T  13862 tgtttacactgaattttggtaaacaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgttt 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 625 - 784
Target Start/End: Original strand, 3682 - 3836
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    ||||||||| |||||  |||||||||| ||||||| |||| ||||||||||||||||| ||||||||||    ||||||   ||||||||| |||||||     
T  3682 aaacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttttgactcgttt----ctctcttccatgcggataatttgagtg 3777  T
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||| ||||||||||||||||||||| |||| | |  || |||||| |||||||||    
T  3778 taagtttt-tgtatgattgaattgtgaccctttttacttaagagaaactaatatttatac 3836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 3486 - 3545
Alignment:
Q  402 cgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgt 460  Q
    |||||||||| ||||| ||||||| |||||||||||||||||||| |||| |||||||||    
T  3486 cgttggtttaaaaatgtttacttggaagatcaaccagtaaatcttaaggacatattgtgt 3545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 594 - 752
Target Start/End: Complemental strand, 9166 - 9012
Alignment:
Q  594 aacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtt 692  Q
    |||||||||||||||| || ||||||   | | ||||||||||||||  |||||||||| ||||||| |||| ||||||||||||||||||||||| |||    
T  9166 aacaagtaaattgcaaagacatttaagaaaatgaacttaaattgcattgattgaatgtagattggtacacatattcatacattgcaacttgtgacttgtt 9067  T
Q  693 tgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgac 752  Q
    |    ||||||   ||||||||| ||||| | |||||||| |||||||||||||||||||    
T  9066 t----ctctcttccatgcggataatttgaatgtaagtttt-tgtatgattgaattgtgac 9012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 405 - 460
Target Start/End: Complemental strand, 9360 - 9304
Alignment:
Q  405 tggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgt 460  Q
    ||||||| ||||| ||||||| |||||||||||||||||||| |||| |||||||||    
T  9360 tggtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggacatattgtgt 9304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 626 - 753
Target Start/End: Complemental strand, 12474 - 12351
Alignment:
Q  626 aacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtat 725  Q
    ||||||||||||||   ||||||| ||||||||| |||| ||||||||||||||||||||||| ||||    ||||||   ||||||||| ||||||| |    
T  12474 aacttaaattgcattggttgaatgcaaattggtacacatgttcatacattgcaacttgtgacttgttt----ctctcttccatgcggataatttgagtgt 12379  T
Q  726 aagttttctgtatgattgaattgtgacc 753  Q
    ||||||| ||||||||||| ||||||||    
T  12378 aagttttttgtatgattgatttgtgacc 12351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 12723 - 12631
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatctta-ggatatattgtgtttgtta 466  Q
    |||||||  ||||||| ||| ||| |||||||||||| ||||  || |||| ||||||||  ||||||||||| ||| |||||||||||||||    
T  12723 tgtttacactgatttttggtaaacaaccgttggtttaaaaatatttccttgcaagatcaattagtaaatcttagggacatattgtgtttgtta 12631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 625 - 749
Target Start/End: Complemental strand, 1450 - 1330
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    ||||||||| |||||  |||||||||||||||||| ||||  |||||||||||||||||||||||||    ||||||||   ||||| ||| |||||||     
T  1450 aaacttaaactgcattgattgaatgtaaattggtacacatgatcatacattgcaacttgtgactcgt----ttctctcttccatgcgaataatttgagtg 1355  T
Q  725 taagttttctgtatgattgaattgt 749  Q
    |||||||| |||||||||| |||||    
T  1354 taagttttgtgtatgattggattgt 1330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 624 - 784
Target Start/End: Original strand, 250062 - 250218
Alignment:
Q  624 taaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagt 723  Q
    |||||||||| || ||  |||||||||||||||||| |||  ||||||||||||||||||||||||||    ||||| ||   ||  ||||| |||||||    
T  250062 taaacttaaaatgtattgattgaatgtaaattggtacacaaattcatacattgcaacttgtgactcgt----ttctcgcttccatatggataatttgagt 250157  T
Q  724 ataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
     |||||||| |||||||||| |||||||||  |||| | || ||||||||| |||||||||    
T  250158 gtaagttttgtgtatgattggattgtgaccacttttccttgggaaaaactactatttatac 250218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 642 - 761
Target Start/End: Complemental strand, 7556 - 7441
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgat 741  Q
    ||||||||||| ||| || |||| ||||||||||||||||||||||||||||    ||||||   ||||||||| ||||||| || ||||| ||||||||    
T  7556 attgaatgtaagttgatacacatgttcatacattgcaacttgtgactcgttt----ctctcttccatgcggataatttgagtgtatgttttttgtatgat 7461  T
Q  742 tgaattgtgacccatttttc 761  Q
    ||||||||||| | ||||||    
T  7460 tgaattgtgactcttttttc 7441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 7808 - 7741
Alignment:
Q  400 accgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttgtta 466  Q
    |||| ||||||| ||||  ||||||| ||||||||| |||||||||| |||| |||||||||||||||    
T  7808 accgctggtttaaaaatatttacttgcaagatcaactagtaaatcttaaggacatattgtgtttgtta 7741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 642 - 759
Target Start/End: Complemental strand, 3828 - 3716
Alignment:
Q  642 attgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgat 741  Q
    ||||||| |||||||||  |||| |||||||||| |||||||||||||||||    ||||||   ||||||||| ||||||| |||||||| ||||||||    
T  3828 attgaatataaattggtc-acatgttcatacatttcaacttgtgactcgttt----ctctcttccatgcggataatttgagtgtaagttttttgtatgat 3734  T
Q  742 tgaattgtgacccatttt 759  Q
     |||||||||||||||||    
T  3733 agaattgtgacccatttt 3716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 4100 - 4011
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgtttg 463  Q
    |||||||  ||| ||| ||| ||| |||| ||||||| ||||  ||||||| |||||||||||||||||||| |||| ||||||||||||    
T  4100 tgtttacactgaattttggtaaacaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtttg 4011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 589 - 784
Target Start/End: Original strand, 45177 - 45370
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    ||||||||||||||||||||| || |||||||| | |  | | |||||||||  ||||||||||| |||||  |||| ||||||||||||||||||||||    
T  45177 aaatgaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgcacatattcatacattgcaacttgtgac 45276  T
Q  688 tcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||    | ||   || |||| | | |||||  ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  45277 tcgtttgc----cgcttccatacggacaatattgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 48; Significance: 6e-18; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 589 - 784
Target Start/End: Complemental strand, 129349 - 129157
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| || ||||| || | | ||||||||||||||  | ||||||||| ||| || |||  ||||||||||||||||||||||    
T  129349 aaataaacaagtaaattgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaagttgttacacagattcatacattgcaacttgtgac 129250  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||    || || ||   ||  ||||||||||||  ||| ||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  129249 tcgt----ttatcgcttccataaggatagtttgagcgtaaatttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 129157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 589 - 693
Target Start/End: Complemental strand, 107605 - 107500
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||| ||||||||| || |||||||| | | ||||||||||||||  |  |||||||| |||||| |||  ||||||||||||||||||||||    
T  107605 aaataaacaagcaaattgcaaagacatttaaagaaatgaacttaaattgcattgacggaatgtaagttggtacacagattcatacattgcaacttgtgac 107506  T
Q  688 tcgttt 693  Q
    ||||||    
T  107505 tcgttt 107500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 589 - 784
Target Start/End: Original strand, 33282 - 33474
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| |  |||||||| | |  | |||||||||||  | ||||||||| |||||| |||| |||||||||| |||||||||||    
T  33282 aaataaacaagtaaattgcaaaggcatttaaagaaatgtatttaaattgcattgactgaatgtaagttggtacacatattcatacattccaacttgtgac 33381  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||    || || ||   ||  ||||||||||||  ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  33382 tcgt----ttatcgcttccatatggatagtttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 33474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 784
Target Start/End: Complemental strand, 200303 - 200117
Alignment:
Q  594 aacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtt 692  Q
    |||||||||||||||| ||  ||||||| | | ||||||||||||||  || |||| ||| |||||| |||  |||||||||||||||||||||||| |     
T  200303 aacaagtaaattgcaaagacgtttaaagaaatgaacttaaattgcattgatcgaatataagttggtacacagattcatacattgcaacttgtgactcat- 200205  T
Q  693 tgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
       ||||| ||   ||  ||||| ||||||| |||||||| ||||||||||||||||||||| |||||| |  ||||||| | |||||||||    
T  200204 ---ttctcgcttccataaggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttttcctaagaaaaacaactatttatac 200117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 4e-16; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 631 - 783
Target Start/End: Complemental strand, 390227 - 390078
Alignment:
Q  631 aaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagt 729  Q
    |||||||| | ||| |||| ||||||||  |||| ||||||| |||||||||||||||||||||    |||||   || |||| ||| |||||| |||||    
T  390227 aaattgcaaagatttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tctcttccatacggacagtattgagtgtaagt 390132  T
Q  730 tttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttata 783  Q
    |||  |||||||||||||||||||| |||||| |  ||||||||| ||||||||    
T  390131 tttgagtatgattgaattgtgacccgtttttcctaagaaaaactaatatttata 390078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 450
Target Start/End: Original strand, 115055 - 115131
Alignment:
Q  375 tgtttaccttgattttcggtgaaccaccgttggtttaca-aatgattacttgtaagatcaaccagtaaatcttagga 450  Q
    |||||||  ||||||| ||| ||| | |||||||||| | |||| ||||||| ||||||||||||||||||||||||    
T  115055 tgtttacactgatttttggtaaacaatcgttggtttaaataatgtttacttgcaagatcaaccagtaaatcttagga 115131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 25159 - 25225
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||  |||||||||    
T  25159 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 25225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 28657 - 28723
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||  |||||||||    
T  28657 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 28723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 115416 - 115482
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||  |||||||||    
T  115416 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 115482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 589 - 784
Target Start/End: Original strand, 68052 - 68244
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||| ||||||||| || ||||| || | | ||||||||||||||  | ||||||||| || ||| |||  ||||||||||||||||||||||    
T  68052 aaataaacaagcaaattgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaagttagtacacagattcatacattgcaacttgtgac 68151  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||    || || ||   ||  ||||||||||||  ||||||||  |||||||||||||||||| | |||||| |  ||||||||| |||||||||    
T  68152 tcgt----ttatcgcttccataaggatagtttgagcgtaagtttttagtatgattgaattgtgactcttttttcctaagaaaaactactatttatac 68244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 784
Target Start/End: Original strand, 76157 - 76349
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||| ||||||||| || ||||| || | | ||||||||||||||  |  ||||||||  | ||| |||  ||||||||||||||||||||||    
T  76157 aaataaacaagcaaattgcaaagacatttagagaaatgaacttaaattgcattgacagaatgtaagatagtacacagattcatacattgcaacttgtgac 76256  T
Q  688 tcgtttgcttctctctgaaatgcggatagtttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||     || ||   ||  ||||||||||||  ||||||||  |||||||||||||||||| | |||||| |  ||||||||| |||||||||    
T  76257 tcgttta----tcgcttccataaggatagtttgagcgtaagtttttagtatgattgaattgtgactcttttttcctaagaaaaactactatttatac 76349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 625 - 748
Target Start/End: Original strand, 26909 - 27027
Alignment:
Q  625 aaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagtttgagta 724  Q
    |||||||||||||||  |||||| ||||||||||| |||| |||||||| ||  |||||| ||||||    |||||||| |||||| |||||||||| |     
T  26909 aaacttaaattgcattgattgaaagtaaattggtacacatattcatacagtgtgacttgtaactcgt----ttctctct-aaatgcagatagtttgattg 27003  T
Q  725 taagttttctgtatgattgaattg 748  Q
    |||||||| |||||| ||||||||    
T  27004 taagttttttgtatggttgaattg 27027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 654 - 784
Target Start/End: Original strand, 50915 - 51042
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgac 752  Q
    |||||| |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||||||||||    
T  50915 ttggtacacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgac 51010  T
Q  753 ccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||| |  ||||||||| |||||||||    
T  51011 ccatttttcctaagaaaaactactatttatac 51042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 46338 - 46404
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  ||||||||||||||||||||||||||| |  ||||||||| |||||||||    
T  46338 ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 46404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 646 - 784
Target Start/End: Original strand, 151402 - 151537
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||||||| |||||| ||||||||  ||||||||||    
T  151402 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttg----tcgcttccatacggatagtattgagtgtaagtttttagtatgattga 151497  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||| |||||||||    
T  151498 attgtgacccctttttcctaagaaaaactactatttatac 151537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 7)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 589 - 692
Target Start/End: Complemental strand, 116594 - 116490
Alignment:
Q  589 aaatgaacaagtaaattgcaa-gaaatttaaaggattaaacttaaattgcataaattgaatgtaaattggtagacattttcatacattgcaacttgtgac 687  Q
    |||| |||||||||||||||| || |||||||| | |  | | |||||||||  | ||||||||| |||||| |||| ||||||||||||||||||||||    
T  116594 aaataaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgac 116495  T
Q  688 tcgtt 692  Q
    |||||    
T  116494 tcgtt 116490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 784
Target Start/End: Original strand, 6658 - 6793
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| |||||||| |||||||||||    
T  6658 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagttttttgtatgattga 6753  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||| || |||||| |  ||||||||| |||||||||    
T  6754 attgtgatccctttttcctaagaaaaactactatttatac 6793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 62206 - 62140
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  62206 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 62140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 71384 - 71318
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  71384 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 71318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 85136 - 85001
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| |||||| |  ||||||||||    
T  85136 aatggaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagttcttagtatgattga 85041  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||| |||||||||    
T  85040 attgtgacccgtttttcctaagaaaaactactatttatac 85001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 62527 - 62477
Alignment:
Q  413 aaatgattacttgtaagatcaaccagtaaatcttagga-tatattgtgttt 462  Q
    ||||| ||||||| ||||||||||||||||||||||||  |||||||||||    
T  62527 aaatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgttt 62477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 71705 - 71655
Alignment:
Q  413 aaatgattacttgtaagatcaaccagtaaatcttagga-tatattgtgttt 462  Q
    ||||| ||||||| ||||||||||||||||||||||||  |||||||||||    
T  71705 aaatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgttt 71655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 5693 - 5627
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  ||||||||||||||||||||||||||| |  ||||||||| |||||||||    
T  5693 ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 5627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 1793 - 1727
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||| |||||||||  ||||||||||||||||||||||||||| |  ||||||||| |||||||||    
T  1793 ttgagcataagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 25142 - 25076
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  ||||||||||||||||||||||||||| |  ||||||||| |||||||||    
T  25142 ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 25076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 23157 - 23022
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  23157 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattga 23062  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||| |||||||||    
T  23061 attgtgacccgtttttcctaagaaaaactactatttatac 23022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 44264 - 44198
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  44264 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 44198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 30720 - 30585
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  30720 aatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattga 30625  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||| |||||| |  ||||||||| |||||||||    
T  30624 attgtgacccgtttttcctaagaaaaactactatttatac 30585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 646 - 693
Target Start/End: Complemental strand, 36454 - 36407
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgttt 693  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  36454 aatgtaagttggtacacatgttcatacattgcaacttgtgactcgttt 36407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 36716 - 36653
Alignment:
Q  400 accgttggtttacaaatgattacttgtaagatcaaccagtaaatctt-aggatatattgtgttt 462  Q
    |||| ||||||| ||||  ||||||| |||||||||||||||||||| |||| |||||||||||    
T  36716 accgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgttt 36653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 784
Target Start/End: Original strand, 8760 - 8895
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  8760 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattga 8855  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||  |||||| |  ||||||||| |||||||||    
T  8856 attgtgacctgtttttcctaagaaaaactactatttatac 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 29411 - 29477
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  29411 ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 29477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 39920 - 39854
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| |||||||| ||||||||||||||||||||  |||||| |  ||||||||| |||||||||    
T  39920 ttgagtgtaagttttttgtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 39854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 784
Target Start/End: Original strand, 44262 - 44397
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||  |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| |||||||| |||||||||||    
T  44262 aatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagttttttgtatgattga 44357  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||  |||||| |  ||||||||  |||||||||    
T  44358 attgtgacctgtttttcctaagaaaaactcctatttatac 44397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 32137 - 32071
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  32137 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 32071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 118437 - 118503
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  118437 ttgagtgtaagttttgcgtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 118503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 784
Target Start/End: Original strand, 142233 - 142353
Alignment:
Q  661 acattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattgaattgtgacccatttt 759  Q
    |||| ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||   ||||||||||||||||||| ||||    
T  142233 acatattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagttttgaatatgattgaattgtgacccgtttt 142328  T
Q  760 tcatgtgaaaaactattatttatac 784  Q
    || |  ||||||||| |||||||||    
T  142329 tcctaagaaaaactactatttatac 142353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 58631 - 58496
Alignment:
Q  646 aatgtaaattggtagacattttcatacattgcaacttgtgactcgtttgcttctctctgaaatgcggatagt-ttgagtataagttttctgtatgattga 744  Q
    |||| ||||||||| |||  ||||||| |||||||||||||||||||||    || ||   || |||| ||| |||||| ||||||||  ||||||||||    
T  58631 aatgaaaattggtacacagattcatactttgcaacttgtgactcgtttg----tcgcttccatacggacagtattgagtgtaagtttttagtatgattga 58536  T
Q  745 attgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||||||  |||||| |  ||||||||| |||||||||    
T  58535 attgtgacctgtttttcctaagaaaaactactatttatac 58496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 466
Target Start/End: Original strand, 4820 - 4873
Alignment:
Q  413 aaatgattacttgtaagatcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    ||||| ||||||| || ||||||||||||||||||||| ||||| |||||||||    
T  4820 aaatggttacttgcaacatcaaccagtaaatcttaggacatattatgtttgtta 4873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 466
Target Start/End: Complemental strand, 409 - 374
Alignment:
Q  431 tcaaccagtaaatcttaggatatattgtgtttgtta 466  Q
    |||||||||||||||||||| |||||||||||||||    
T  409 tcaaccagtaaatcttaggacatattgtgtttgtta 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 725 - 784
Target Start/End: Original strand, 5857 - 5916
Alignment:
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  5857 taagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 5916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 725 - 784
Target Start/End: Original strand, 20048 - 20107
Alignment:
Q  725 taagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    ||||||||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  20048 taagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 20107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 654 - 696
Target Start/End: Original strand, 11282 - 11324
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgct 696  Q
    |||||| |||| ||||||| |||||||||||||||||||||||    
T  11282 ttggtacacatattcatactttgcaacttgtgactcgtttgct 11324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 31; Significance: 0.00000009; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 8149 - 8215
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||  |  ||||||||| |||||||||    
T  8149 ttgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactactatttatac 8215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 15279 - 15345
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||||||  |||||||||||||||||||| |||||  |  ||||||||| |||||||||    
T  15279 ttgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactactatttatac 15345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 654 - 696
Target Start/End: Complemental strand, 32241 - 32199
Alignment:
Q  654 ttggtagacattttcatacattgcaacttgtgactcgtttgct 696  Q
    |||||| |||| ||||||| |||||||||||||||||||||||    
T  32241 ttggtacacatgttcatactttgcaacttgtgactcgtttgct 32199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Original strand, 43189 - 43255
Alignment:
Q  718 ttgagtataagttttctgtatgattgaattgtgacccatttttcatgtgaaaaactattatttatac 784  Q
    |||||| ||||| ||  |||||||||||||||||||| |||||| |  ||||||||| |||||||||    
T  43189 ttgagtgtaagtgtttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 43255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 4894 - 4853
Alignment:
Q  419 ttacttgtaagatcaaccagtaaatcttagga-tatattgtg 459  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  4894 ttacttgcaagatcaaccagtaaatcttaggagtatattgtg 4853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University