View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4631_high_6 (Length: 295)
Name: NF4631_high_6
Description: NF4631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4631_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 35 - 285
Target Start/End: Original strand, 32378776 - 32379026
Alignment:
| Q |
35 |
tgtgtgtgtaagtggttgtattataggataattgtgtttataaataaattctaattccatcctagttgttataagttgtaattacttctgtcccatcgaa |
134 |
Q |
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| T |
32378776 |
tgtgtgtgtgagtggttgtattataggataattgtgtttataaataaattctaattccatcctagctgttataagttgtaattacttctgtcccatcgaa |
32378875 |
T |
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| Q |
135 |
aatctctgcctagcaatgcttgaattagttaagtttataaataatatcttgagcatgcatgctcctattgcagtatataaccacaatgcattcttcaact |
234 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32378876 |
aatctctgcctagcaatgcttgaattagttaagtttataaataatatcttgagcatgcatgctcctattgcagtatataaccacaatgcattcttcaact |
32378975 |
T |
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| Q |
235 |
ccttcaatcgcataatttacaatagttcagctttctccgaaacaagaataa |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
32378976 |
ccttcaatcgcataatttacaatagttcagctttctccaaaacaagaataa |
32379026 |
T |
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