View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4631_low_10 (Length: 248)
Name: NF4631_low_10
Description: NF4631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4631_low_10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 248
Target Start/End: Original strand, 13226350 - 13226600
Alignment:
| Q |
5 |
cgtccaaaactttaaagaattaaatatacgagccacctctctaatatattagacattttatccatttataattgttgtagaactttataaccactcacgc |
104 |
Q |
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| T |
13226350 |
cgtccaaaactttaaagaatttaatatatgtgtcacctctcttatatataagacattttatccatttgtaattgttgtagaactttataaccactcacac |
13226449 |
T |
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| Q |
105 |
ttaagcccaatatctccattcaaattgaatatttataacccaacttccctattctttctaaatg--aaatcttcttgtgaatcttttttgtcctt----- |
197 |
Q |
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| T |
13226450 |
ttaaccccaatatctccattcatattgaatatttataacccaacttccctattctttctaaatgtaaaatcttcttgagaatctattttgtcccttttaa |
13226549 |
T |
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| Q |
198 |
ttaacgagtttttataaattttcaattgcatatatctagttatttatttat |
248 |
Q |
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| T |
13226550 |
ttaacgagttcttataaattttcaatggcatatatctaattatttatttat |
13226600 |
T |
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