View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4633-Insertion-10 (Length: 464)
Name: NF4633-Insertion-10
Description: NF4633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4633-Insertion-10 |
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Alignment Details
Target: chr8 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 7 - 421
Target Start/End: Complemental strand, 32956031 - 32955629
Alignment:
| Q |
7 |
agagagaagagcaaacgccgcggttgccacgacagccgcgactaacggcggcataatggagtcaggaaacttctacagtaacaacaacaacaa---ttca |
103 |
Q |
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| T |
32956031 |
agagagaagagcgaacgccgcggttgccacgacagctgcgactaacggtggcataatggagtcaggaaacttctacagtaacaacaacaacaacaattca |
32955932 |
T |
|
| Q |
104 |
tggtactcacaaccacagagtcaaatgtatggcaatgagctacgtttcatggatgattcagatgcagaatcagaaaatggcattcctaatttcctttctt |
203 |
Q |
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| T |
32955931 |
tggtactcacaaccacagagtcaaatgtatggcaatgagctacgtttcatggatgattcagatgcagaatcagaaaatggcattcctaatttcctttctt |
32955832 |
T |
|
| Q |
204 |
ggagactcaacacaagtcttgttcacgattacacaagatgaagcattggaattagaagttacgatgatattgatgatgatgacgacataagcttaatatt |
303 |
Q |
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| T |
32955831 |
ggagactcaacacaagtcttgttcacgattacacaagatgaagcattggaattagaagtt---------------atgatgatgacataagcttaatatt |
32955747 |
T |
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| Q |
304 |
cctaagataatagaacagaaagaagacaaaaaatgatgatgtagatgtaggtgtacgacaatgttttacgatgtagatgtttttgattgtgatggttatg |
403 |
Q |
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|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32955746 |
cctacgttaatagaacagaaagaagacaaaaaatgatgatgtagatgtaggtgtacgacaatgttttacgatgtagatgtttttgattgtgatggttatg |
32955647 |
T |
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| Q |
404 |
ttatggtctcgtcaacgg |
421 |
Q |
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|||||||||||||||||| |
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| T |
32955646 |
ttatggtctcgtcaacgg |
32955629 |
T |
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