View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4633_high_7 (Length: 237)
Name: NF4633_high_7
Description: NF4633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4633_high_7 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 14527626 - 14527390
Alignment:
| Q |
1 |
tcaatgcatgaacctacatcctagcataattttgtccactaaaaagtgccgagaactacaatttatttacctcctgaactcccattttcaacttccttgt |
100 |
Q |
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| T |
14527626 |
tcaatgcatgaagctacatcctagcataattttgtccactaaaaagtgccgagaactacaatttatttacctcctgaactcccattttcaacttccttgt |
14527527 |
T |
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| Q |
101 |
taagaaagtcagtgttggagtacctcatgaagcatccggtgttgagcgcccgtccttctgacgagggcagacatctcaaaatagaagatgatgcatgctc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
14527526 |
taagaaagtcagtgttggagtacctcatgaagcatccggtgttgagcgcccgtccttctgacgagggcagacatctcaaaatagaagatgacgcatgctc |
14527427 |
T |
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| Q |
201 |
gagacatgctttgcaagacttagaatccaaacttctc |
237 |
Q |
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| T |
14527426 |
gagacatgctttgcaagacttagaatccaaacttctc |
14527390 |
T |
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