View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4633_low_1 (Length: 551)
Name: NF4633_low_1
Description: NF4633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4633_low_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 519; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 519; E-Value: 0
Query Start/End: Original strand, 1 - 551
Target Start/End: Original strand, 24926016 - 24926566
Alignment:
| Q |
1 |
tgaaaactacaaaatcagtagcagaacatataagcaatggagttatgaacataccatatgcctcattgccatatctaaagacttctttgaaagcgtactt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24926016 |
tgaaaactacaaaatcagtagcagaacatataagcaatggagttatgaacataccatatgcctcattgccatatctaaagacttctttgaaagcgtactt |
24926115 |
T |
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| Q |
101 |
ccgaatccagagctgccagatgaagatttgccataagaattgttgttggcgcaagggccgtcatgctttggtggtgcaagttttctcatgtttactactc |
200 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
24926116 |
ccgaatccagagctgccagatgaagatttgccatatgaattgttgttggcgcaagggtcgtcatgctttggtggtgcaagttttctcatgtttactactc |
24926215 |
T |
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| Q |
201 |
tttcgaccatctttgtcccaattacaacagggctatcttcgtcaccatcggtgaaacgagctctaatcaaagcatgcaatgagctgtgattattgtgagt |
300 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
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| T |
24926216 |
tttcgaccatctttgtaccaattacaacagggctatcttcgtcaccatcggtgaaacgagctctactcaaagcatgcaatgagctatgattattgtgagt |
24926315 |
T |
|
| Q |
301 |
gaacccggttgaagcacgtcctttcgaaggtgtgttagactgccttctagatttagtattgctagtcgcctcaacagaagctgatctcgaactcggaact |
400 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24926316 |
gaacccggttgaagcacgtcctttcgaaggtgtattagactgccttctagatttagtattgctagtcgcctcaacagaagctgatctcgaactcggaact |
24926415 |
T |
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| Q |
401 |
ccaggcctatttctagtgactgaagccagtctttctggcaatgatttcttcaaatttggaggagcgtcatgagtaaatccaggcatttgtgagggttccc |
500 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24926416 |
ccaggcctatttctagtgactgaagccggtctttctggcaatgatttcttcaaatttggaggagcgtcatgagtaaatccaggcatttgtgagggttccc |
24926515 |
T |
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| Q |
501 |
aaggtctagattttactgatggagagttgccacgtgactgcaccggattct |
551 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
24926516 |
aaggtctagattttactgatggagagatgccacgtgactgcaccggattct |
24926566 |
T |
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