View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4634_high_6 (Length: 246)
Name: NF4634_high_6
Description: NF4634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4634_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 8016561 - 8016778
Alignment:
| Q |
18 |
atcatcatcatcatgtcaataataataaaaataacaaacaaggaagagtggatcatcagagataacatatttattagtgtatgacatacgacatacatac |
117 |
Q |
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| T |
8016561 |
atcatcatcatcatgtcaata---ataaaaataacaaacaaggaagagtggatcatcagagataacatatttattagtgtatgacatacgacatacatac |
8016657 |
T |
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| Q |
118 |
ccggagggaagagtgtggacataagttggtatcatgggaagcccgggcccatcaacggaggaaagcccagcccgcatttcagaagacattgcatcagcaa |
217 |
Q |
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| T |
8016658 |
ccggagggaagagtgtggacataagttggtatcatgggaagcccgggcccatcaacggaggaaagcccagcccgcatttcagaagacattgcatcagcaa |
8016757 |
T |
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| Q |
218 |
catggtgaagaagaggtagag |
238 |
Q |
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||||||||||||||||||||| |
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| T |
8016758 |
catggtgaagaagaggtagag |
8016778 |
T |
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