View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4634_low_4 (Length: 351)

Name: NF4634_low_4
Description: NF4634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4634_low_4
NF4634_low_4
[»] chr7 (40 HSPs)
chr7 (125-351)||(28556968-28557194)
chr7 (125-351)||(707565-707791)
chr7 (11-120)||(16108351-16108460)
chr7 (11-120)||(11303638-11303747)
chr7 (11-120)||(23664615-23664724)
chr7 (11-120)||(25926792-25926901)
chr7 (11-120)||(32125881-32125990)
chr7 (11-112)||(456712-456813)
chr7 (11-120)||(14948785-14948894)
chr7 (11-120)||(29797001-29797110)
chr7 (11-120)||(29800820-29800929)
chr7 (11-119)||(18431102-18431210)
chr7 (11-110)||(14269436-14269535)
chr7 (11-110)||(14269629-14269728)
chr7 (11-110)||(15376386-15376485)
chr7 (11-110)||(16232911-16233010)
chr7 (11-110)||(16410449-16410548)
chr7 (11-110)||(20384796-20384895)
chr7 (11-110)||(27217251-27217350)
chr7 (30-120)||(41523327-41523417)
chr7 (30-120)||(41525789-41525879)
chr7 (11-120)||(24702619-24702728)
chr7 (11-120)||(24705066-24705175)
chr7 (44-120)||(13918065-13918141)
chr7 (11-110)||(13869739-13869837)
chr7 (11-110)||(18627956-18628055)
chr7 (11-108)||(15081516-15081613)
chr7 (30-106)||(8940885-8940961)
chr7 (30-110)||(14156751-14156831)
chr7 (45-120)||(1856892-1856967)
chr7 (11-110)||(10501066-10501165)
chr7 (11-110)||(16214075-16214174)
chr7 (11-110)||(18640662-18640761)
chr7 (11-110)||(26355654-26355753)
chr7 (11-110)||(26358106-26358205)
chr7 (44-110)||(11392972-11393038)
chr7 (30-110)||(8940693-8940773)
chr7 (30-110)||(45847327-45847407)
chr7 (11-110)||(21189268-21189367)
chr7 (217-330)||(41385287-41385400)
[»] chr8 (32 HSPs)
chr8 (125-319)||(36900324-36900518)
chr8 (125-351)||(17706883-17707089)
chr8 (11-120)||(18677727-18677836)
chr8 (11-120)||(4542036-4542145)
chr8 (11-110)||(19896905-19897004)
chr8 (11-120)||(24485706-24485815)
chr8 (11-110)||(1484792-1484891)
chr8 (11-110)||(5852965-5853064)
chr8 (11-110)||(14409117-14409216)
chr8 (11-110)||(15070951-15071050)
chr8 (11-110)||(16412988-16413087)
chr8 (11-110)||(19936580-19936679)
chr8 (11-110)||(14824165-14824264)
chr8 (11-110)||(16401597-16401696)
chr8 (11-110)||(19896712-19896811)
chr8 (11-110)||(20045868-20045967)
chr8 (11-110)||(27472089-27472188)
chr8 (11-120)||(14397403-14397512)
chr8 (11-120)||(16198285-16198394)
chr8 (11-120)||(22002143-22002252)
chr8 (11-108)||(24049001-24049098)
chr8 (11-110)||(15202658-15202757)
chr8 (11-110)||(20403670-20403769)
chr8 (44-110)||(38549484-38549550)
chr8 (11-108)||(45290222-45290319)
chr8 (11-110)||(4483671-4483769)
chr8 (11-110)||(15202851-15202950)
chr8 (11-110)||(16401212-16401310)
chr8 (11-110)||(16401404-16401503)
chr8 (11-110)||(32122119-32122218)
chr8 (46-110)||(38549677-38549741)
chr8 (11-77)||(16412828-16412894)
[»] chr6 (40 HSPs)
chr6 (11-120)||(12942580-12942689)
chr6 (11-120)||(15892071-15892180)
chr6 (11-120)||(17883160-17883269)
chr6 (11-120)||(33862184-33862293)
chr6 (11-110)||(30676382-30676481)
chr6 (11-120)||(12742708-12742817)
chr6 (11-108)||(18914323-18914420)
chr6 (11-120)||(23415355-23415464)
chr6 (11-110)||(1598447-1598546)
chr6 (11-110)||(2290853-2290952)
chr6 (11-110)||(18334265-18334364)
chr6 (11-110)||(19847644-19847743)
chr6 (11-110)||(24422937-24423036)
chr6 (11-110)||(33864668-33864767)
chr6 (11-117)||(27557113-27557219)
chr6 (11-120)||(1540574-1540683)
chr6 (11-116)||(19858589-19858694)
chr6 (11-120)||(28288999-28289108)
chr6 (14-110)||(8989-9085)
chr6 (204-339)||(1134521-1134655)
chr6 (11-110)||(1598640-1598739)
chr6 (11-110)||(8055420-8055519)
chr6 (11-119)||(25689086-25689194)
chr6 (35-110)||(22981412-22981487)
chr6 (35-110)||(23806921-23806996)
chr6 (11-110)||(25737033-25737132)
chr6 (44-110)||(26924120-26924186)
chr6 (11-109)||(31630214-31630312)
chr6 (11-108)||(26924315-26924412)
chr6 (42-110)||(19005573-19005641)
chr6 (30-110)||(22782636-22782716)
chr6 (217-330)||(7799704-7799817)
chr6 (11-105)||(18914516-18914610)
chr6 (11-119)||(25688893-25689001)
chr6 (257-330)||(19401655-19401728)
chr6 (217-330)||(19597457-19597570)
chr6 (72-110)||(2030-2068)
chr6 (11-76)||(1871-1936)
chr6 (11-76)||(8830-8895)
chr6 (217-321)||(19581063-19581167)
[»] chr5 (25 HSPs)
chr5 (11-120)||(10732603-10732712)
chr5 (11-119)||(32028416-32028524)
chr5 (11-120)||(29346370-29346479)
chr5 (11-120)||(29348843-29348952)
chr5 (11-120)||(29351316-29351425)
chr5 (11-110)||(17516836-17516935)
chr5 (11-110)||(20909402-20909501)
chr5 (11-120)||(37804565-37804674)
chr5 (11-119)||(42245029-42245137)
chr5 (11-110)||(2154304-2154403)
chr5 (11-110)||(20917519-20917618)
chr5 (11-110)||(29330373-29330472)
chr5 (11-110)||(32027836-32027935)
chr5 (11-110)||(39245526-39245625)
chr5 (30-119)||(32028048-32028137)
chr5 (11-110)||(264441-264540)
chr5 (11-110)||(17516643-17516742)
chr5 (11-110)||(39363775-39363873)
chr5 (30-110)||(295947-296027)
chr5 (11-110)||(20901593-20901692)
chr5 (31-110)||(23064924-23065003)
chr5 (11-110)||(32028223-32028322)
chr5 (11-110)||(38619827-38619925)
chr5 (11-77)||(17516483-17516549)
chr5 (11-77)||(20901433-20901499)
[»] chr3 (44 HSPs)
chr3 (11-120)||(15465545-15465654)
chr3 (11-120)||(10247386-10247495)
chr3 (11-120)||(15977923-15978032)
chr3 (11-120)||(26054927-26055036)
chr3 (11-120)||(7781009-7781118)
chr3 (11-120)||(28848284-28848393)
chr3 (11-107)||(8499911-8500007)
chr3 (12-120)||(54521214-54521322)
chr3 (11-110)||(17463568-17463667)
chr3 (11-110)||(34159716-34159815)
chr3 (11-110)||(45606579-45606678)
chr3 (11-110)||(55318976-55319075)
chr3 (11-119)||(16453943-16454052)
chr3 (11-120)||(29544504-29544613)
chr3 (11-119)||(17444427-17444535)
chr3 (12-108)||(25229648-25229744)
chr3 (12-108)||(25237235-25237331)
chr3 (11-110)||(10557299-10557398)
chr3 (11-110)||(16282430-16282529)
chr3 (11-110)||(27165643-27165742)
chr3 (11-110)||(38961510-38961609)
chr3 (11-110)||(41124330-41124429)
chr3 (14-120)||(5223777-5223883)
chr3 (30-120)||(12305532-12305622)
chr3 (13-110)||(6468807-6468904)
chr3 (14-110)||(13153928-13154024)
chr3 (14-110)||(15007893-15007992)
chr3 (11-119)||(20629855-20629963)
chr3 (11-110)||(15412822-15412920)
chr3 (11-110)||(46822652-46822751)
chr3 (11-110)||(53301176-53301275)
chr3 (11-110)||(55476881-55476980)
chr3 (30-112)||(16358338-16358420)
chr3 (14-110)||(13151463-13151559)
chr3 (30-110)||(13436709-13436789)
chr3 (247-351)||(34594667-34594771)
chr3 (46-110)||(13937645-13937709)
chr3 (237-324)||(5386732-5386819)
chr3 (51-110)||(3264426-3264485)
chr3 (44-110)||(14567557-14567623)
chr3 (217-279)||(31200078-31200140)
chr3 (11-84)||(12567950-12568023)
chr3 (11-84)||(13544414-13544487)
chr3 (11-119)||(36528353-36528461)
[»] chr1 (23 HSPs)
chr1 (11-110)||(29777131-29777230)
chr1 (11-120)||(21841157-21841266)
chr1 (11-120)||(21922954-21923063)
chr1 (8-119)||(13227251-13227362)
chr1 (11-110)||(27161259-27161358)
chr1 (8-119)||(29535439-29535550)
chr1 (11-120)||(16362309-16362418)
chr1 (11-110)||(13989256-13989355)
chr1 (11-110)||(15859681-15859780)
chr1 (11-110)||(29298632-29298731)
chr1 (11-110)||(21474759-21474858)
chr1 (11-110)||(31612756-31612855)
chr1 (217-330)||(31815261-31815374)
chr1 (11-119)||(16274919-16275027)
chr1 (46-110)||(31612984-31613048)
chr1 (11-110)||(22122687-22122786)
chr1 (45-120)||(41372896-41372971)
chr1 (11-120)||(23593396-23593505)
chr1 (212-348)||(23573225-23573361)
chr1 (275-348)||(7384449-7384522)
chr1 (44-110)||(16401345-16401411)
chr1 (11-77)||(43543292-43543358)
chr1 (45-110)||(10812678-10812743)
[»] scaffold0230 (3 HSPs)
scaffold0230 (11-120)||(14338-14447)
scaffold0230 (44-110)||(23043-23109)
scaffold0230 (49-110)||(23203-23264)
[»] scaffold0138 (1 HSPs)
scaffold0138 (11-120)||(33562-33671)
[»] chr4 (31 HSPs)
chr4 (11-120)||(15534572-15534681)
chr4 (12-120)||(14048969-14049077)
chr4 (11-120)||(29267744-29267853)
chr4 (11-120)||(36038261-36038370)
chr4 (11-110)||(7640859-7640958)
chr4 (11-110)||(15118025-15118124)
chr4 (11-110)||(52872745-52872844)
chr4 (30-120)||(50222002-50222092)
chr4 (11-120)||(44615679-44615788)
chr4 (11-120)||(49547436-49547545)
chr4 (30-110)||(19617739-19617819)
chr4 (11-119)||(30147306-30147414)
chr4 (11-110)||(1837192-1837291)
chr4 (11-110)||(14970379-14970478)
chr4 (11-110)||(52312952-52313051)
chr4 (11-108)||(14745993-14746090)
chr4 (11-119)||(362571-362679)
chr4 (30-110)||(18214876-18214956)
chr4 (44-120)||(19243124-19243200)
chr4 (276-348)||(42225765-42225837)
chr4 (11-110)||(362764-362863)
chr4 (11-110)||(14746184-14746283)
chr4 (11-110)||(19857969-19858068)
chr4 (11-110)||(44772756-44772855)
chr4 (11-110)||(3515398-3515497)
chr4 (45-120)||(12033436-12033511)
chr4 (11-110)||(15495846-15495945)
chr4 (63-110)||(52313197-52313244)
chr4 (251-330)||(28427325-28427404)
chr4 (11-77)||(52872585-52872651)
chr4 (30-110)||(14185545-14185625)
[»] chr2 (44 HSPs)
chr2 (11-120)||(20261610-20261719)
chr2 (11-120)||(23135970-23136079)
chr2 (11-120)||(10684425-10684534)
chr2 (11-120)||(24897858-24897967)
chr2 (11-120)||(24900341-24900450)
chr2 (11-120)||(24902818-24902927)
chr2 (11-120)||(24905295-24905404)
chr2 (11-120)||(38967870-38967979)
chr2 (247-351)||(31559068-31559172)
chr2 (11-110)||(571788-571887)
chr2 (11-110)||(18809333-18809432)
chr2 (11-110)||(21154680-21154779)
chr2 (11-110)||(23711686-23711785)
chr2 (11-110)||(39682704-39682803)
chr2 (11-120)||(24907770-24907879)
chr2 (11-120)||(31345570-31345679)
chr2 (11-119)||(6726438-6726546)
chr2 (11-107)||(23931851-23931947)
chr2 (11-110)||(22105856-22105955)
chr2 (11-110)||(24368217-24368316)
chr2 (11-110)||(24681835-24681934)
chr2 (11-110)||(26508247-26508346)
chr2 (11-110)||(28577489-28577588)
chr2 (11-110)||(41523745-41523844)
chr2 (11-106)||(45027581-45027676)
chr2 (217-330)||(22059654-22059767)
chr2 (11-110)||(23131253-23131351)
chr2 (11-110)||(23133720-23133818)
chr2 (11-110)||(23709205-23709304)
chr2 (11-110)||(26505769-26505868)
chr2 (11-110)||(32039171-32039270)
chr2 (11-110)||(34402195-34402293)
chr2 (11-110)||(24529219-24529318)
chr2 (11-106)||(32214607-32214702)
chr2 (44-110)||(24642421-24642487)
chr2 (11-108)||(41523554-41523651)
chr2 (14-110)||(23706698-23706793)
chr2 (46-110)||(24918566-24918630)
chr2 (11-110)||(21154487-21154586)
chr2 (11-110)||(24671416-24671515)
chr2 (48-110)||(23709012-23709074)
chr2 (11-104)||(23706896-23706988)
chr2 (217-324)||(42827789-42827896)
chr2 (11-77)||(32214442-32214508)
[»] scaffold1296 (1 HSPs)
scaffold1296 (11-110)||(1645-1744)
[»] scaffold0064 (1 HSPs)
scaffold0064 (8-118)||(68349-68459)
[»] scaffold0695 (1 HSPs)
scaffold0695 (11-120)||(6337-6446)
[»] scaffold0363 (1 HSPs)
scaffold0363 (11-120)||(9632-9741)
[»] scaffold0200 (1 HSPs)
scaffold0200 (11-120)||(18044-18153)
[»] scaffold0051 (1 HSPs)
scaffold0051 (11-120)||(31594-31703)
[»] scaffold0028 (5 HSPs)
scaffold0028 (11-120)||(134601-134710)
scaffold0028 (11-120)||(137070-137179)
scaffold0028 (11-120)||(139539-139648)
scaffold0028 (11-120)||(142008-142117)
scaffold0028 (11-120)||(144477-144586)
[»] scaffold0716 (1 HSPs)
scaffold0716 (11-110)||(5085-5184)
[»] scaffold0574 (1 HSPs)
scaffold0574 (11-110)||(6842-6941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (11-110)||(6608-6707)
[»] scaffold0278 (2 HSPs)
scaffold0278 (11-110)||(8130-8229)
scaffold0278 (11-107)||(8323-8419)
[»] scaffold0134 (1 HSPs)
scaffold0134 (11-110)||(38212-38311)
[»] scaffold0040 (1 HSPs)
scaffold0040 (11-110)||(43130-43229)
[»] scaffold0023 (3 HSPs)
scaffold0023 (11-110)||(94801-94900)
scaffold0023 (11-119)||(17103-17211)
scaffold0023 (11-76)||(16953-17018)
[»] scaffold0029 (1 HSPs)
scaffold0029 (30-120)||(11699-11789)
[»] scaffold0741 (3 HSPs)
scaffold0741 (11-108)||(3784-3881)
scaffold0741 (44-110)||(3975-4041)
scaffold0741 (31-110)||(3589-3668)
[»] scaffold0422 (1 HSPs)
scaffold0422 (11-120)||(3414-3523)
[»] scaffold0454 (1 HSPs)
scaffold0454 (45-120)||(1-76)
[»] scaffold0444 (1 HSPs)
scaffold0444 (11-110)||(13783-13882)
[»] scaffold0306 (2 HSPs)
scaffold0306 (11-110)||(11012-11111)
scaffold0306 (62-110)||(15354-15402)
[»] scaffold0044 (1 HSPs)
scaffold0044 (11-110)||(40790-40889)
[»] scaffold0254 (1 HSPs)
scaffold0254 (11-120)||(21138-21248)
[»] scaffold0129 (1 HSPs)
scaffold0129 (217-330)||(3748-3861)
[»] scaffold0117 (1 HSPs)
scaffold0117 (11-120)||(39723-39832)
[»] scaffold0043 (2 HSPs)
scaffold0043 (11-110)||(10182-10281)
scaffold0043 (11-110)||(10375-10474)
[»] scaffold0293 (1 HSPs)
scaffold0293 (46-120)||(19751-19825)
[»] scaffold0747 (1 HSPs)
scaffold0747 (11-119)||(980-1088)
[»] scaffold0140 (1 HSPs)
scaffold0140 (212-348)||(35919-36055)
[»] scaffold0711 (3 HSPs)
scaffold0711 (44-110)||(7555-7621)
scaffold0711 (11-110)||(7363-7461)
scaffold0711 (46-106)||(7174-7234)
[»] scaffold0436 (1 HSPs)
scaffold0436 (46-120)||(8444-8518)
[»] scaffold0322 (1 HSPs)
scaffold0322 (44-110)||(18361-18427)
[»] scaffold1792 (2 HSPs)
scaffold1792 (44-110)||(791-857)
scaffold1792 (49-110)||(636-697)
[»] scaffold0149 (2 HSPs)
scaffold0149 (44-110)||(30443-30509)
scaffold0149 (11-77)||(30603-30669)
[»] scaffold0001 (1 HSPs)
scaffold0001 (11-110)||(501455-501554)
[»] scaffold0151 (2 HSPs)
scaffold0151 (64-110)||(37064-37110)
scaffold0151 (62-110)||(36871-36919)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 125 - 351
Target Start/End: Original strand, 28556968 - 28557194
Alignment:
Q  125 agactcaattacccaccaatgaggcagcctaaacaataaaataaacatattaagcttttaattaaattaaacttctttaaaaatatacaacaaacatagt 224  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||  |||||| |||||||||| ||||||    
T  28556968 agactcaattacccaccaatgaggcaacctacacaataaattaaacatattaagcttttaattaaattaaactttgttaaaattatacaacaatcatagt 28557067  T
Q  225 attataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgattttgttgca 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28557068 attataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattggagatgaacatccttatgattttgttgca 28557167  T
Q  325 cccacatataagcaattcaattgatga 351  Q
    |||||||||| ||||||||||||||||    
T  28557168 cccacatataggcaattcaattgatga 28557194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 125 - 351
Target Start/End: Original strand, 707565 - 707791
Alignment:
Q  125 agactcaattacccaccaatgaggcagcctaaacaataaaataaacatattaagcttttaattaaattaaacttctttaaaaatatacaacaaacatagt 224  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  707565 agactcaattacccactaatgaggtagcctaaacaataaattaaacatattaagcttttaattaaattaaactttgttaaaattatacaacaaacatagt 707664  T
Q  225 attataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgattttgttgca 324  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  707665 attataacaacgaacacaccgtaaaggttggacatttccaatatctccttttagggttttcatttaaattggagatgaacatccttatgattttgttgca 707764  T
Q  325 cccacatataagcaattcaattgatga 351  Q
    |||||||||| ||||||||||||||||    
T  707765 cccacatataggcaattcaattgatga 707791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 16108460 - 16108351
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  16108460 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 16108361  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  16108360 ctaagacctc 16108351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 11303638 - 11303747
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || |  |||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  11303638 tacaactttcgtgtttacatctaagaccaattatgtaccaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 11303737  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  11303738 ctaagacctc 11303747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 23664724 - 23664615
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  23664724 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccatttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 23664625  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  23664624 ctaagacctc 23664615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 25926901 - 25926792
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  25926901 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 25926802  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  25926801 ctaagacctc 25926792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 32125881 - 32125990
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  32125881 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 32125980  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  32125981 ctaagacctc 32125990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 456712 - 456813
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  456712 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccggttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 456811  T
Q  111 at 112  Q
    ||    
T  456812 at 456813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 14948894 - 14948785
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||| |||||||||||||||||    
T  14948894 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctaaaattcataaaaattca 14948795  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  14948794 ctaagacctc 14948785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 29797001 - 29797110
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||| |||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  29797001 tacaactttcgtgcttacacctaagaccaattctgtatcaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 29797100  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  29797101 ctaagacctc 29797110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 29800820 - 29800929
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||| |||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  29800820 tacaactttcgtgcttacacctaagaccaattctgtatcaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 29800919  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  29800920 ctaagacctc 29800929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 18431102 - 18431210
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||  | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  18431102 tacaactttcgtgtttacacctaagaccagttctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 18431201  T
Q  111 ataagacct 119  Q
     ||||||||    
T  18431202 ctaagacct 18431210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 14269535 - 14269436
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  14269535 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 14269436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 14269728 - 14269629
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  14269728 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 14269629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 15376485 - 15376386
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  15376485 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 15376386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 16232911 - 16233010
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  16232911 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 16233010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 16410449 - 16410548
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  16410449 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 16410548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 20384895 - 20384796
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  20384895 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 20384796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 27217251 - 27217350
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  27217251 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 27217350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 41523327 - 41523417
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  41523327 cctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattcactaagacctc 41523417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 41525789 - 41525879
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  41525789 cctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattcactaagacctc 41525879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 24702619 - 24702728
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||| |||||| || | ||||| ||||| | |||||||| |||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  24702619 tacaaccttcgtgtttacacctaagaccaattctgtaccaaccaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 24702718  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  24702719 ctaagacctc 24702728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 24705066 - 24705175
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||| |||||| || | ||||| ||||| | |||||||| |||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  24705066 tacaaccttcgtgtttacacctaagaccaattctgtaccaaccaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 24705165  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  24705166 ctaagacctc 24705175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 13918141 - 13918065
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  13918141 tgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattcactaagacctc 13918065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 13869739 - 13869837
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||||||||||  ||||||||| || ||| |||||||||| |||||||||||||||||||||    
T  13869739 tacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttcaa-ttcggacaaagttgtgctgaaattcataaaaattca 13869837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 18627956 - 18628055
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||| |||||||||| |  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  18627956 tacaactttcgtgtttacacctaagaccaattctgtgccaatcaatatcagttttcattttaaattcggacaaagttgtgctgaaattcataaaaattca 18628055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 15081613 - 15081516
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    ||||||||| ||| || | ||||| ||||| | |||||||||||||| |  ||||||||| |||||| |||||||||| |||||||||||||||||||    
T  15081613 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaatatcagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaatt 15081516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 8940885 - 8940961
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaa 106  Q
    ||||| ||||| |||||| |||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||    
T  8940885 cctaagaccaattatgtatcaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaa 8940961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 14156831 - 14156751
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||| | ||||||||||||||||  ||||||||| |||||| ||||| |||| |||||||||||||||||||||    
T  14156831 cctaagaccaattttgtaccaatcaataccagttttcatttcaaattcggacaaggttgtgctgaaattcataaaaattca 14156751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 1856967 - 1856892
Alignment:
Q  45 gtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    |||||||||||||||  |||| |||| |||||| ||||||||||  |||||||||||||||||||| |||||||||    
T  1856967 gtaccaatcaataccagtttttatttcaaattcggacaaagttgttctgaaattcataaaaattcactaagacctc 1856892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 10501165 - 10501066
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | |||| |||||||||||  ||||||||| |||||| ||||| |||| |||||||||||||||||||||    
T  10501165 tacaacttttgtgtttacacctaagaccaactctgtatcaatcaataccagttttcatttcaaattcggacaaggttgtgctgaaattcataaaaattca 10501066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 16214075 - 16214174
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | | ||| ||||| | |||| |||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  16214075 tacaacttttgtgtttacacgtaagaccaattctgtatcaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 16214174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 18640662 - 18640761
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||| |||||||||| |  ||||||||| |||||| |||||||||| |||||||||| ||||||||||    
T  18640662 tacaactttcgtgtttacacctaagaccaattctgtgccaatcaatatcagttttcatttcaaattcggacaaagttgtgctgaaattcttaaaaattca 18640761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 26355753 - 26355654
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| |  | | ||| ||||| | ||||||||||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  26355753 tacaactttcgtgttaacacataagaccaattctgtaccaatcaataccagtttttatttcaaattcggacaaagttgtgctgaaattcataaaaattca 26355654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 26358205 - 26358106
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| |  | | ||| ||||| | ||||||||||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  26358205 tacaactttcgtgttaacacataagaccaattctgtaccaatcaataccagtttttatttcaaattcggacaaagttgtgctgaaattcataaaaattca 26358106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 11393038 - 11392972
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||  ||||||||| |||||| |||||||||  |||||||||||||||||||||    
T  11393038 tgtaccaatcaataccagttttcatttcaaattcggacaaagttatgctgaaattcataaaaattca 11392972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 8940693 - 8940773
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||| | |||||||||||||| |  ||||||||| |||||| |||||||||| ||| |||||||||||||||||    
T  8940693 cctaagaccaattttgtaccaatcaatagcagttttcatttcaaattcggacaaagttgtgcttaaattcataaaaattca 8940773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 45847407 - 45847327
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||| | ||||||||||||||    ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  45847407 cctaagaccaattttgtaccaatcaatattatttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 45847327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 21189367 - 21189268
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||| ||||| | ||||||||| ||||||  ||||||||| |||||  |||||||||| || ||||||||||||||||||    
T  21189367 tacaactttcttgtttacacctaagaccaactctgtaccaataaataccagttttcatttcaaatttggacaaagttgtgcggaaattcataaaaattca 21189268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 41385287 - 41385400
Alignment:
Q  217 aacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgatt 316  Q
    |||| ||||||| |||| | |||||||  || |||||||  |||||||||||||||||||||| || |||  | |||| || |||||||| || || |||    
T  41385287 aacaaagtattacaacagcaaactcacaatataggttgggtatttccaatatctccttttagggttgtcaagtgaattggatatgaacattctcataatt 41385386  T
Q  317 ttgttgcacccaca 330  Q
    |||||||| |||||    
T  41385387 ttgttgcaaccaca 41385400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 125 - 319
Target Start/End: Complemental strand, 36900518 - 36900324
Alignment:
Q  125 agactcaattacccaccaatgaggcagcctaaacaataaaataaacatattaagcttttaattaaattaaacttctttaaaaatatacaacaaacatagt 224  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  36900518 agactcaattacccaccaatgaggcagcctaaacaataaattaaacatattaagcttttaattaaattaaactttgttaaaattatacaacaaacatagt 36900419  T
Q  225 attataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgattttg 319  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  36900418 attataacaacgaactcaccgtaaaggttggacattttcaatatctccttttagggttttcatttaaattggagatgaacatccttatgattttg 36900324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 125 - 351
Target Start/End: Original strand, 17706883 - 17707089
Alignment:
Q  125 agactcaattacccaccaatgaggcagcctaaacaataaaataaacatattaagcttttaattaaattaaacttctttaaaaatatacaacaaacatagt 224  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| |||||                
T  17706883 agacttaattacccaccaatgaggcagcctaaacaataaattaaacatattaagcttttaattaaattaaactttgttaaaattatac------------ 17706970  T
Q  225 attataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgattttgttgca 324  Q
           ||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||||||||||     
T  17706971 -------caacgaactcaccgtaaaggttggacatttccaatatcttcttt-agggttttcatttaaattggagatgaacatccttatgattttgttgcg 17707062  T
Q  325 cccacatataagcaattcaattgatga 351  Q
    |||||||||| | ||||||||||||||    
T  17707063 cccacatataggtaattcaattgatga 17707089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 18677836 - 18677727
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  18677836 tacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttaaaattcggacaaagttgtgctgaaattcataaaaattca 18677737  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  18677736 ctaagacctc 18677727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 4542145 - 4542036
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  4542145 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 4542046  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  4542045 ctaagacctc 4542036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 19896905 - 19897004
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  19896905 tacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttaaaattcggacaaagttgtgctgaaattcataaaaattca 19897004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 24485815 - 24485706
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | || || ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  24485815 tacaactttcgtgtttacacccaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 24485716  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  24485715 ctaagacctc 24485706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 1484792 - 1484891
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  1484792 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 1484891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 5853064 - 5852965
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  5853064 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 5852965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 14409216 - 14409117
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  14409216 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 14409117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 15070951 - 15071050
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  15070951 tacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 15071050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 16413087 - 16412988
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||| ||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  16413087 tacaactgtcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 16412988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 19936679 - 19936580
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  19936679 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 19936580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 14824165 - 14824264
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | | ||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  14824165 tacaactttcgtgtttacacctaagaccaattctataccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 14824264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 16401696 - 16401597
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| |||||| ||||||||| |  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  16401696 tacaactttcgtgtttacacctaagaccaattatgtatcaatcaatatcagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 16401597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 19896712 - 19896811
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||||| || | ||||| ||||| | | ||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  19896712 tacaattttcgtgtttacacctaagaccaattctctaccaatcaataccagttttcatttaaaattcggacaaagttgtgctgaaattcataaaaattca 19896811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 20045967 - 20045868
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  20045967 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagtttttatttcaaattcggacaaagttgtgctgaaattcataaaaattca 20045868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 27472188 - 27472089
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || |  |||| ||||| ||||||||||||||||||  ||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  27472188 tacaactttcgtgtttacagctaagaccaattatgtaccaatcaataccagttttcatttcaaactcggacaaagttgtgctgaaattcataaaaattca 27472089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 14397512 - 14397403
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||| |||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||  ||||    
T  14397512 tacagctttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaattttca 14397413  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  14397412 ctaagacctc 14397403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 16198285 - 16198394
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  |||| |||| |||||| |||||||||| | |||||||||||||| ||||    
T  16198285 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagtttttatttcaaattcggacaaagttgtggtgaaattcataaaatttca 16198384  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  16198385 ctaagacctc 16198394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 22002143 - 22002252
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||| ||||| | |||||||||||||| |  ||||||||| |||||| |||||||||| ||||||||||||| |||||||    
T  22002143 tacaactttcatgtttacacctaagaccaattctgtaccaatcaatatcagttttcatttcaaattcggacaaagttgtgctgaaattcatacaaattca 22002242  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  22002243 ctaagacctc 22002252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 24049001 - 24049098
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    ||||||||| ||| || | ||||| ||||| ||||||||||||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||    
T  24049001 tacaacttttgtgtttacacctaagaccaattatgtaccaatcaataccagtttttatttcaaattcggacaaagttgtgctgaaattcataaaaatt 24049098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 15202757 - 15202658
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||| |  ||||||||| |||||| ||||| |||| |||||||||||||||||||||    
T  15202757 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaatatcagttttcatttcaaattcggacaacgttgtgctgaaattcataaaaattca 15202658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 20403670 - 20403769
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||| |||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  20403670 tacaactttcgtgtttacacctaagaccaattctgtatcaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaacattca 20403769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 38549550 - 38549484
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  38549550 tgtaccaatcaataccagttttcattttaaattcggacaaagttgtgctgaaattcataaaaattca 38549484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 45290319 - 45290222
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||| ||||||  ||||||||| |||||||||||||||||||    
T  45290319 tacaacttttgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttcaaattcgaacaaagttgtgctgaaattcataaaaatt 45290222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 4483671 - 4483769
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||| ||||||  ||||||||| || ||| |||||||||| |||||||||||||||||||||    
T  4483671 tacaactttcgtgtttatacctaagaccaattatgtaccaataaataccagttttcatttcaa-ttcggacaaagttgtgctgaaattcataaaaattca 4483769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 15202950 - 15202851
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||| ||| |||||| |||||||||| ||||||||||||||| |||||    
T  15202950 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcgtttcaaattcggacaaagttgtgctgaaattcataaatattca 15202851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 16401310 - 16401212
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | |||||| |||| | || ||| |||||||||   |||||||| |||||| |||||||||| |||||||||||||||||||||    
T  16401310 tacaactttcgtgtttacacctaaa-ccaattctggacctatcaataccagatttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 16401212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 16401503 - 16401404
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| || |||||||||||||||  ||| ||||| |||||| ||||||||||   ||||||||||||| |||||    
T  16401503 tacaactttcgtgtttacacctaagaccaattacgtaccaatcaataccagtttgcatttcaaattctgacaaagttgtattgaaattcataaacattca 16401404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 32122119 - 32122218
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||| |||||| || | ||||| | ||| | |||||||||||||| |  ||| ||||| |||||| |||||||||| |||||||||||||||||||||    
T  32122119 tacaacattcgtgtttacacctaagaacaattctgtaccaatcaatatcagtttacatttcaaattcggacaaagttgtgctgaaattcataaaaattca 32122218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 38549741 - 38549677
Alignment:
Q  46 taccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||   |||||||| |||||| |||||||||| | |||||||||||||||||||    
T  38549741 taccaatcaataccagatttcatttcaaattcggacaaagttgtgatgaaattcataaaaattca 38549677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 16412894 - 16412828
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattc 77  Q
    ||||||||||||| || | ||||| ||||  | |||||||||||||||| |||||||||| ||||||    
T  16412894 tacaactttcgtgtttacacctaagaccagttctgtaccaatcaataccaattttcatttcaaattc 16412828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 12942580 - 12942689
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  12942580 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 12942679  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  12942680 ctaagacctc 12942689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 15892180 - 15892071
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||| ||||    
T  15892180 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaatttca 15892081  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  15892080 ctaagacctc 15892071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 17883269 - 17883160
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | || || ||||| | ||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  17883269 tacaactttcgtgtttacaccaaagaccaattctgtaccaatcaataccagttttcatttcaaattcagacaaagttgtgctgaaattcataaaaattca 17883170  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  17883169 ctaagacctc 17883160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 33862184 - 33862293
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  33862184 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 33862283  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  33862284 ctaagacctc 33862293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 30676481 - 30676382
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  30676481 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 30676382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 12742708 - 12742817
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | | ||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  12742708 tacaactttcgtgtttacacctaagaccaattctataccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 12742807  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  12742808 ctaagacctc 12742817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 18914323 - 18914420
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    ||||||||||||| || ||||||| ||||| ||||||||||| ||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||    
T  18914323 tacaactttcgtgtttacccctaagaccaattatgtaccaataaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaatt 18914420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 23415355 - 23415464
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| || || | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  23415355 tacaactttcgtgtttacacctaagacaaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 23415454  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  23415455 ctaagacctc 23415464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 1598447 - 1598546
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  1598447 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 1598546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 2290952 - 2290853
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  2290952 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 2290853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 18334364 - 18334265
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  18334364 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 18334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 19847743 - 19847644
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  19847743 tacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 19847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 24422937 - 24423036
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  24422937 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 24423036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 33864668 - 33864767
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  33864668 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 33864767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 27557113 - 27557219
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||| ||||| |||||||||||||||| |  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  27557113 tacaactttcatgtttacacctaagaccaattatgtaccaatcaatagcagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 27557212  T
Q  111 ataagac 117  Q
     ||||||    
T  27557213 ctaagac 27557219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 1540683 - 1540574
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | | ||||||||||||||  ||| ||||| |||||| |||||||||| |||||||||||||||||||||    
T  1540683 tacaactttcgtgtttacacctaagaccaattctataccaatcaataccagtttgcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 1540584  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  1540583 ctaagacctc 1540574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 19858694 - 19858589
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| | ||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  19858694 tacaacttttgtgtttacacctaagatcaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 19858595  T
Q  111 ataaga 116  Q
     |||||    
T  19858594 ctaaga 19858589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 28289108 - 28288999
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||| | ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| ||| |||||||||||||||||    
T  28289108 tacaacttttgtgtttacacctgagaccaattatgtaccaatcaataccagttttcatttcaaattctgacaaagttgtgctaaaattcataaaaattca 28289009  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  28289008 ctaagacctc 28288999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 9085 - 8989
Alignment:
Q  14 aactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || | ||||| ||||| | ||||||||||| ||||  |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  9085 aactttcgtgtttacacctaagaccaattctgtaccaatcattaccagttttcatttaaaattcggacaaagttgtgctgaaattcataaaaattca 8989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 1134655 - 1134521
Alignment:
Q  204 aaaatatacaacaaacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaa 303  Q
    |||||| |||| ||||| | ||||||||||||  | ||||| |||||||||| ||||||||||||||| ||||||| || |||| | |||| ||||||||    
T  1134655 aaaataaacaaaaaacaaactattataacaacacattcaccataaaggttgggcatttccaatatctctttttagg-ttgtcatgtgaattggagatgaa 1134557  T
Q  304 catccttatgattttgttgcacccacatataagcaa 339  Q
    |||||| || ||||| ||||| ||||||||| ||||    
T  1134556 catcctcataatttttttgcaaccacatataggcaa 1134521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 1598640 - 1598739
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||  ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  1598640 tacaactttcgtgtttatacctaagaccatttatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 1598739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 8055420 - 8055519
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  8055420 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggataaagttgtgctgaaattcataaaaattca 8055519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 25689086 - 25689194
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||| |||||||||||||||    
T  25689086 tacaacttttgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgatattcataaaaattca 25689185  T
Q  111 ataagacct 119  Q
     || |||||    
T  25689186 ctatgacct 25689194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 22981487 - 22981412
Alignment:
Q  35 aaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  22981487 aaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 22981412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 23806921 - 23806996
Alignment:
Q  35 aaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  23806921 aaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 23806996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 25737033 - 25737132
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| || || | ||||||||||||||||  ||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  25737033 tacaactttcgtgtttacacctaagacgaattctgtaccaatcaataccagttttcatttcaaattcggataaagttgtgctgaaattcataaaaattca 25737132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 26924186 - 26924120
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  26924186 tgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 26924120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 31630312 - 31630214
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattc 109  Q
    ||||| ||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||| ||| ||||||||||||||||||||    
T  31630312 tacaaatttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaaattgtgctgaaattcataaaaattc 31630214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 26924412 - 26924315
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    ||||||||||||| || | ||||| | ||| | |||||||||||||||   ||||||||| |||||| |||||||||| |||||||||||||||||||    
T  26924412 tacaactttcgtgtttacacctaagaacaattctgtaccaatcaatactagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaatt 26924315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 19005573 - 19005641
Alignment:
Q  42 tatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||||  ||||||||| |||||| ||||||| || |||||||||||||||||||||    
T  19005573 tatgtaccaatcaataccagttttcatttcaaattcggacaaagatgtgctgaaattcataaaaattca 19005641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 22782636 - 22782716
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||| | ||||||||| ||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  22782636 cctaagaccaattctgtaccaattaataccatttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 22782716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 7799704 - 7799817
Alignment:
Q  217 aacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgatt 316  Q
    |||| ||||||| |||| | |||||||| || ||||||| |||||||| |||||||||||||| ||| || || |||| || ||||||||  | ||||||    
T  7799704 aacaaagtattacaacagcaaactcaccatataggttgggcatttccagtatctccttttagggtttgcacttgaattggatatgaacattttcatgatt 7799803  T
Q  317 ttgttgcacccaca 330  Q
    |||||||| |||||    
T  7799804 ttgttgcaaccaca 7799817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 18914516 - 18914610
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaa 105  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  | || ||||||||||| | | |||||| ||| ||||||||||||    
T  18914516 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagtattaatttaaaattcggtctaagttgtgctaaaattcataaaa 18914610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 25688893 - 25689001
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || |  |||| ||||| |  |||||||| ||||||  |||| |||| |||||| || ||||||| |||||||||||||||||||||    
T  25688893 tacaactttcgtgtttacagctaagaccaattcggtaccaataaataccagttttgatttcaaattcggataaagttgtgctgaaattcataaaaattca 25688992  T
Q  111 ataagacct 119  Q
     || |||||    
T  25688993 ctatgacct 25689001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 19401655 - 19401728
Alignment:
Q  257 catttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgattttgttgcacccaca 330  Q
    |||||||| |||||||||||||| ||||||  | |||| || |||||||| || |||||||||||||| |||||    
T  19401655 catttccagtatctccttttagggttttcacgtgaattggatatgaacattctcatgattttgttgcaaccaca 19401728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 19597457 - 19597570
Alignment:
Q  217 aacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgatt 316  Q
    |||| ||||||| |||| | |||||||| || |||||||  |||| ||||||||||||||||| || |||  | |||| || |||||||| || || |||    
T  19597457 aacaaagtattacaacagcaaactcaccatataggttgggtattttcaatatctccttttagggttgtcaactgaattggatatgaacattctcataatt 19597556  T
Q  317 ttgttgcacccaca 330  Q
    |||||||| |||||    
T  19597557 ttgttgcaaccaca 19597570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 2068 - 2030
Alignment:
Q  72 aaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  2068 aaattcggacaaagttgtgctgaaattcataaaaattca 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 1936 - 1871
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaatt 76  Q
    |||||||||||||  | | ||||| ||||| ||||||||||||||||||  ||||||||| |||||    
T  1936 tacaactttcgtgtgtacacctaagaccaattatgtaccaatcaataccagttttcatttcaaatt 1871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 8895 - 8830
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaatt 76  Q
    |||||||||||||  | | ||||| ||||| ||||||||||||||||||  ||||||||| |||||    
T  8895 tacaactttcgtgtgtacacctaagaccaattatgtaccaatcaataccagttttcatttcaaatt 8830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 321
Target Start/End: Original strand, 19581063 - 19581167
Alignment:
Q  217 aacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgatt 316  Q
    |||| ||||||| |||| | |||| ||| || |||||||  |||||||||||||||||||||  || ||| || |||| || |||||||| || || |||    
T  19581063 aacaaagtattacaacagcaaactaaccatacaggttgggtatttccaatatctccttttagagttgtcaattgaattggatatgaacattctcataatt 19581162  T
Q  317 ttgtt 321  Q
    |||||    
T  19581163 ttgtt 19581167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 10732712 - 10732603
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  10732712 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 10732613  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  10732612 ctaagacctc 10732603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 32028416 - 32028524
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| |||| ||||||||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  32028416 tacaactttcgtgttttcacctaaaaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 32028515  T
Q  111 ataagacct 119  Q
     || |||||    
T  32028516 ctatgacct 32028524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 29346370 - 29346479
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  29346370 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 29346469  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  29346470 ctaagacctc 29346479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 29348843 - 29348952
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  29348843 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 29348942  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  29348943 ctaagacctc 29348952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 29351316 - 29351425
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  29351316 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 29351415  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  29351416 ctaagacctc 29351425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 17516935 - 17516836
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  17516935 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcagacaaagttgtgctgaaattcataaaaattca 17516836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 20909402 - 20909501
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  20909402 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 20909501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 37804674 - 37804565
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||| ||  ||||||||| |||||  |||||||||| |||||||||||||||||||||    
T  37804674 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaatgccagttttcatttcaaattatgacaaagttgtgctgaaattcataaaaattca 37804575  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  37804574 ctaagacctc 37804565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 42245137 - 42245029
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||| |||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  42245137 tacaactttcgtgtttacacctaagaccaattctgtatcaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 42245038  T
Q  111 ataagacct 119  Q
     ||||||||    
T  42245037 ctaagacct 42245029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 2154403 - 2154304
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  2154403 tacaactttagtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 2154304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 20917618 - 20917519
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  |||||||||  ||||| |||||||||| |||||||||||||||||||||    
T  20917618 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcgaattcggacaaagttgtgctgaaattcataaaaattca 20917519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 29330373 - 29330472
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  29330373 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagtttttatttcaaattcggacaaagttgtgctgaaattcataaaaattca 29330472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 32027836 - 32027935
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  32027836 tacaactttcttgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 32027935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 39245526 - 39245625
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | | ||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| ||| |||||||||||||||||    
T  39245526 tacaactttcgtgtttacacataagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctcaaattcataaaaattca 39245625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 32028048 - 32028137
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacct 119  Q
    ||||| ||||| | |||||||||||||| | |||||||||| |||||| |||||||||| ||||||||||||||||||||| || |||||    
T  32028048 cctaagaccaattctgtaccaatcaataacaattttcatttcaaattcggacaaagttgtgctgaaattcataaaaattcactatgacct 32028137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 264540 - 264441
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| ||||| |||| |||||||||||||||||||||    
T  264540 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaggttgtgctgaaattcataaaaattca 264441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 17516742 - 17516643
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||  ||||| | ||| ||||||||||||  ||||||||||||| || |||||||||| |||||||||||||||||||||    
T  17516742 tacaactttcgtgtttacacctaggaccaattctgtgccaatcaataccatttttcatttaaaaatcggacaaagttgtgctgaaattcataaaaattca 17516643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 39363775 - 39363873
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||||||||||  ||||||||| || ||| |||||||||| |||||||||||||||||||||    
T  39363775 tacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttcaa-ttcggacaaagttgtgctgaaattcataaaaattca 39363873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 296027 - 295947
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||| | |||||||||||||| |  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  296027 cctaagaccaattctgtaccaatcaatatcagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 295947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 20901692 - 20901593
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||| ||||| | ||||||||||||||||  ||||||||| ||| || |||||||||| | |||||||||||||||||||    
T  20901692 tacaactttcatgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaaatcggacaaagttgtgttgaaattcataaaaattca 20901593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 23064924 - 23065003
Alignment:
Q  31 ctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||| ||||| | ||||||||||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  23064924 ctaagaccaattctgtaccaatcaataccagttttaatttcaaattcggacaaagttgtgctgaaattcataaaaattca 23065003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 32028223 - 32028322
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |  ||| |||||||||   |||||||| |||||| |||||||||| |||||||||||||||||||||    
T  32028223 tacaactttcgtgtttacacctaagaccaattcttgacctatcaataccagatttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 32028322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 38619827 - 38619925
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||||||||||  |||| |||| || ||| |||||||||| |||||||||||||||| ||||    
T  38619827 tacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagtttttatttcaa-ttcggacaaagttgtgctgaaattcataaaatttca 38619925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 17516549 - 17516483
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattc 77  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| ||||||    
T  17516549 tacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccggttttcatttcaaattc 17516483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 20901499 - 20901433
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattc 77  Q
    |||||| |||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| ||||||    
T  20901499 tacaacgttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattc 20901433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 15465545 - 15465654
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||||| |||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  15465545 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 15465644  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  15465645 ctaagacctc 15465654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 10247495 - 10247386
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  10247495 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 10247396  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  10247395 ctaagacctc 10247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 15977923 - 15978032
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  15977923 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 15978022  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  15978023 ctaagacctc 15978032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 26055036 - 26054927
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||| ||||| |||||||||||||||||| |||||| ||| |||||| |||||||||| |||||||||||||||||||||    
T  26055036 tacaactttcatgtttacacctaagaccaattatgtaccaatcaataccaattttcctttcaaattcggacaaagttgtgctgaaattcataaaaattca 26054937  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  26054936 ctaagacctc 26054927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 7781118 - 7781009
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  7781118 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 7781019  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  7781018 ctaagacctc 7781009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 28848393 - 28848284
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| |  |||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  28848393 tacaactttcgtgtttacacctaagaccaattcagtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 28848294  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  28848293 ctaagacctc 28848284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 8499911 - 8500007
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaat 107  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||    
T  8499911 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaat 8500007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 54521214 - 54521322
Alignment:
Q  12 acaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaa 111  Q
    |||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||| ||||||||||||     
T  54521214 acaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaatccataaaaattcac 54521313  T
Q  112 taagacctc 120  Q
    |||||||||    
T  54521314 taagacctc 54521322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 17463568 - 17463667
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  17463568 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 17463667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 34159716 - 34159815
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  34159716 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 34159815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 45606678 - 45606579
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  45606678 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 45606579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 55319075 - 55318976
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||||| |||||||||| |||||  |||||||||| |||||||||||||||||||||    
T  55319075 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttcatttcaaatttggacaaagttgtgctgaaattcataaaaattca 55318976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 16454052 - 16453943
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcata-aaaattc 109  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||| |||||||    
T  16454052 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaaattc 16453953  T
Q  110 aataagacct 119  Q
    | ||||||||    
T  16453952 actaagacct 16453943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 29544613 - 29544504
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||| |  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  29544613 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataacagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 29544514  T
Q  111 ataagacctc 120  Q
      ||||||||    
T  29544513 ccaagacctc 29544504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 17444535 - 17444427
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | | ||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  17444535 tacaactttcgtgtttacacttaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 17444436  T
Q  111 ataagacct 119  Q
     || |||||    
T  17444435 ctatgacct 17444427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 25229648 - 25229744
Alignment:
Q  12 acaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    |||||||||||| || | ||||| ||||| | |||| ||||||||||| |||||||||| |||||| |||||||||| |||||||||||||||||||    
T  25229648 acaactttcgtgtttacacctaagaccaattctgtatcaatcaataccaattttcatttcaaattcggacaaagttgtgctgaaattcataaaaatt 25229744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 25237235 - 25237331
Alignment:
Q  12 acaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    |||||||||||| || | ||||| ||||| | |||| ||||||||||| |||||||||| |||||| |||||||||| |||||||||||||||||||    
T  25237235 acaactttcgtgtttacacctaagaccaattctgtatcaatcaataccaattttcatttcaaattcggacaaagttgtgctgaaattcataaaaatt 25237331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 10557299 - 10557398
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||| ||||||||||||||  ||||||||| |||||| ||||||||||  ||||||||||||||||||||    
T  10557299 tacaactttcgtgtttacacctaagaccaattatttaccaatcaataccagttttcatttcaaattcggacaaagttgttctgaaattcataaaaattca 10557398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 16282529 - 16282430
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||||   ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  16282529 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaatactagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 16282430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 27165643 - 27165742
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || ||||||| ||||| | ||||||||||||||||  ||||||||| ||| || |||||||||| | |||||||||||||||||||    
T  27165643 tacaactttcgtgtttacccctaagaccaattctgtaccaatcaataccagttttcatttcaaaatcggacaaagttgtgttgaaattcataaaaattca 27165742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 38961609 - 38961510
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||| |||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  38961609 tacaactttcgtgtttacacctaagaccaattctgtatcaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 38961510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 41124330 - 41124429
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| | |||| |||||||||| |||||||||||||||||||||    
T  41124330 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcacattcggacaaagttgtgctgaaattcataaaaattca 41124429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 5223777 - 5223883
Alignment:
Q  14 aactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaata 113  Q
    |||||||||| || | ||||| || || | ||||||||||||||||  ||||||||| |||||| ||||||||||  |||||||||||||||||||| ||    
T  5223777 aactttcgtgtttacacctaagacgaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgttctgaaattcataaaaattcacta 5223876  T
Q  114 agacctc 120  Q
    |||||||    
T  5223877 agacctc 5223883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 12305532 - 12305622
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    ||||| ||||| | |||||||||||||| |  ||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  12305532 cctaagaccaattctgtaccaatcaatatcagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattcactaagacctc 12305622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 6468904 - 6468807
Alignment:
Q  13 caactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||| || |  |||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  6468904 caactttcgtgtttacagctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 6468807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 13154024 - 13153928
Alignment:
Q  14 aactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || | ||||  ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  13154024 aactttcgtgtttacacctatgaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 13153928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 15007893 - 15007992
Alignment:
Q  14 aactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacc--ta-ttttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || | ||||||||||| | ||||||||||||||||  || ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  15007893 aactttcgtgtttacacctaaaaccaattttgtaccaatcaataccagtacttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 15007992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 20629963 - 20629855
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | |||||||||||||||   ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  20629963 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaatacaagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 20629864  T
Q  111 ataagacct 119  Q
     || |||||    
T  20629863 ctatgacct 20629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 15412822 - 15412920
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||||||||||  ||||||||| || ||| |||||||||| |||||||||||||||||||||    
T  15412822 tacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttcaa-ttcggacaaagttgtgctgaaattcataaaaattca 15412920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 46822652 - 46822751
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | | ||||||||||||||  ||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  46822652 tacaactttcgtgtttacacctaagaccaattgtttaccaatcaataccacttttcatttcaaaatcggacaaagttgtgctgaaattcataaaaattca 46822751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 53301275 - 53301176
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  |||| |||| |||||| | |||||||| |||||||||||||||||||||    
T  53301275 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagtttttatttcaaattcggtcaaagttgtgctgaaattcataaaaattca 53301176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 55476881 - 55476980
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||| ||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  55476881 tacaactttcgtgtttacacctaagaccaattctgtaccagtcaataccagttttaatttcaaattcggacaaagttgtgctgaaattcataaaaattca 55476980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 16358420 - 16358338
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaat 112  Q
    ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||| ||| |||||||||||||||||||||||    
T  16358420 cctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaaattgtgctgaaattcataaaaattcaat 16358338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 13151559 - 13151463
Alignment:
Q  14 aactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || | ||||  ||||| | ||| ||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  13151559 aactttcgtgtttacacctatgaccaattctgttccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 13151463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 13436709 - 13436789
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||| |||||||||||||||||   ||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  13436709 cctaagaccaattatgtaccaatcaatacaagttttcatttcaaactcggacaaagttgtgctgaaattcataaaaattca 13436789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 351
Target Start/End: Complemental strand, 34594771 - 34594667
Alignment:
Q  247 aaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgattttgttgcacccacatataagcaattcaatt 346  Q
    ||||||||||||||| |||||||| ||||||||||| |||| | |||| ||||||||||||||  | ||||| ||||| | | ||||| |||| ||||||    
T  34594771 aaaggttggacattttcaatatcttcttttaggattgtcatgtgaattggagatgaacatcctcgttattttattgcaactatatataggcaactcaatt 34594672  T
Q  347 gatga 351  Q
    |||||    
T  34594671 gatga 34594667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 13937709 - 13937645
Alignment:
Q  46 taccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||  |||| |||| |||||| |||||||||| ||| |||||||||||||||||    
T  13937709 taccaatcaataccagtttttatttcaaattcggacaaagttgtgctaaaattcataaaaattca 13937645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 324
Target Start/End: Original strand, 5386732 - 5386819
Alignment:
Q  237 aactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgattttgttgca 324  Q
    ||||||| ||| | ||||| ||||||||||| ||||||||||| |||||| || |||| || || |||||||| ||| ||||||||||    
T  5386732 aactcacggtatatgttgggcatttccaatacctccttttagggttttcaattgaattggatattaacatcctcatggttttgttgca 5386819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 3264485 - 3264426
Alignment:
Q  51 atcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| |||||||||| ||||||||  || |||| ||||||||||||||| |||||    
T  3264485 atcaataccaattttcatttcaaattcaggaaaggttgtgctgaaattcataaatattca 3264426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 14567623 - 14567557
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||| | |||||||  ||||||||| |||||| |  ||||||| |||||||||||||||||||||    
T  14567623 tgtacctaccaataccagttttcatttcaaattcgggaaaagttgtgctgaaattcataaaaattca 14567557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 31200140 - 31200078
Alignment:
Q  217 aacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttagg 279  Q
    |||| ||||||| |||| | |||||||| || |||||||  ||||||||||||||||||||||    
T  31200140 aacaaagtattacaacatcaaactcaccatataggttgggtatttccaatatctccttttagg 31200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 12567950 - 12568023
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaa 84  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||||   ||||||||| |||||| ||||||    
T  12567950 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaatactagttttcatttcaaattcggacaaa 12568023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 13544414 - 13544487
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaa 84  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||||   ||||||||| |||||| ||||||    
T  13544414 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaatactagttttcatttcaaattcggacaaa 13544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 36528353 - 36528461
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || |  |||| ||||| | |||||  |||||||||  ||||||||| |||||| |  || |||| ||||||||||||||| |||||    
T  36528353 tacaactttcgtgtttacatctaagaccaattctgtacttatcaataccagttttcatttcaaattcgggaaaggttgtgctgaaattcataaatattca 36528452  T
Q  111 ataagacct 119  Q
     || |||||    
T  36528453 ctatgacct 36528461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 29777131 - 29777230
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||||||||| | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  29777131 tacaactttcgtgattacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 29777230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 21841157 - 21841266
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  21841157 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 21841256  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  21841257 ctaagacctc 21841266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 21923063 - 21922954
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  21923063 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 21922964  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  21922963 ctaagacctc 21922954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 13227251 - 13227362
Alignment:
Q  8 acatacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaat 107  Q
    ||||| |||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||    
T  13227251 acataaaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaat 13227350  T
Q  108 tcaataagacct 119  Q
    ||| ||||||||    
T  13227351 tcactaagacct 13227362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 27161358 - 27161259
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  27161358 tacaactttcgtgtttacacctaagaccaattttgtaccaatcaatacctgttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 27161259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 29535439 - 29535550
Alignment:
Q  8 acatacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaat 107  Q
    |||||||||||||||| ||   ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| | ||||||||||||||||    
T  29535439 acatacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgttgaaattcataaaaat 29535538  T
Q  108 tcaataagacct 119  Q
    ||| ||||||||    
T  29535539 tcactaagacct 29535550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 16362309 - 16362418
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | || || ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  16362309 tacaactttcgtgtttacacccaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 16362408  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  16362409 ctaagacctc 16362418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 13989256 - 13989355
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  13989256 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 13989355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 15859780 - 15859681
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  15859780 tacaactttcgtgcttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 15859681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 29298632 - 29298731
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| ||||||  ||||||||| |||||||||||||||||||||    
T  29298632 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcgaacaaagttgtgctgaaattcataaaaattca 29298731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 21474858 - 21474759
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| | |||| |||||||||| |||||||||||||||||||||    
T  21474858 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccggttttcatttcatattcggacaaagttgtgctgaaattcataaaaattca 21474759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 31612756 - 31612855
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| |  |||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  31612756 tacaactttcgtgtttacacctaagaccaattcggtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 31612855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 31815261 - 31815374
Alignment:
Q  217 aacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgatt 316  Q
    |||| ||||||| |||| | |||||| | || ||||||| |||||||| |||||||||||||| ||||||| | |||| || |||||||| || ||||||    
T  31815261 aacaaagtattacaacagcaaactcatcatataggttgggcatttccagtatctccttttagggttttcatgtgaattggatatgaacattctcatgatt 31815360  T
Q  317 ttgttgcacccaca 330  Q
    |||||||| |||||    
T  31815361 ttgttgcaaccaca 31815374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 16275027 - 16274919
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  |||||||||  ||||| |||| ||||| ||| ||||||||||| |||||    
T  16275027 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttccaattcggacagagttgtgctaaaattcataaacattca 16274928  T
Q  111 ataagacct 119  Q
     || |||||    
T  16274927 ctatgacct 16274919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 31612984 - 31613048
Alignment:
Q  46 taccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||  |||||| || ||||||||||||||||| |||||||||||||||||||||    
T  31612984 taccaatcaataccagttttcagttcaaattcagacaaagttgtgctgaaattcataaaaattca 31613048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 22122786 - 22122687
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||| ||||| | || ||| |||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  22122786 tacaactttcatgtttacacctaagaccaattctggacctatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 22122687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 41372896 - 41372971
Alignment:
Q  45 gtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    |||||||||  ||||  ||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  41372896 gtaccaatctttaccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattcactaagacctc 41372971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 23593505 - 23593396
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||| || || |||| |||||||||||||  ||||||||| ||| || |||||||||| |||||||||| | ||||||||    
T  23593505 tacaactttcttgtttacacctaagactaattatgcaccaatcaataccagttttcatttcaaactcggacaaagttgtgctgaaattcgtgaaaattca 23593406  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  23593405 ctaagacctc 23593396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 348
Target Start/End: Complemental strand, 23573361 - 23573225
Alignment:
Q  212 caacaaacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatcctta 311  Q
    |||||| || |||||||||  ||  |||||||| |||| ||||| |||||||| ||||||||||||||||| ||| || |||| ||||| |||||| | |    
T  23573361 caacaatcaaagtattatacaaaataactcaccataaatgttgggcatttccagtatctccttttaggattctcagttgaatttgagataaacatcttca 23573262  T
Q  312 tgattttgttgcacccacatataagcaattcaattga 348  Q
    |  |||||||||| ||||| ||| ||| |||| ||||    
T  23573261 ttgttttgttgcaaccacaaataggcatttcagttga 23573225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 7384449 - 7384522
Alignment:
Q  275 ttaggattttcatttaaattagagatgaacatccttatgattttgttgcacccacatataagcaattcaattga 348  Q
    ||||| |||| |||| |||| |||||||||||||| || |||||||||||| |||||||| |||| ||||||||    
T  7384449 ttagggtttttatttgaattggagatgaacatcctcataattttgttgcacgcacatataggcaactcaattga 7384522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 16401345 - 16401411
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||| | |||||||  ||||||||| |||||| |  ||||||| |||||||||||||||||||||    
T  16401345 tgtaccgaccaataccagttttcatttcaaattcgggaaaagttgtgctgaaattcataaaaattca 16401411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 43543292 - 43543358
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattc 77  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| ||||||    
T  43543292 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattc 43543358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 10812743 - 10812678
Alignment:
Q  45 gtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| |||||||||  |||| |||| |||||| || ||||||| ||||||||||||| |||||||    
T  10812743 gtaccgatcaataccagttttaatttcaaattcggagaaagttgtgctgaaattcatagaaattca 10812678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 14338 - 14447
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||| |||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  14338 tacaacgttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 14437  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  14438 ctaagacctc 14447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 23109 - 23043
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||   |||||||| |||||| || ||||||| |||||||||||||||||||||    
T  23109 tgtaccaatcaataccagatttcatttcaaattcggaaaaagttgtgctgaaattcataaaaattca 23043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 23264 - 23203
Alignment:
Q  49 caatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||| ||||||  ||||||||| |||||  |||||||||| ||||||||||||| |||||||    
T  23264 caataaataccagttttcatttcaaatttggacaaagttgtgctgaaattcatacaaattca 23203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 33562 - 33671
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  33562 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcagacaaagttgtgctgaaattcataaaaattca 33661  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  33662 ctaagacctc 33671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 15534572 - 15534681
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  15534572 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 15534671  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  15534672 ctaagacctc 15534681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 14048969 - 14049077
Alignment:
Q  12 acaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaa 111  Q
    ||||||||| || || | ||||||||||| |||||||||||||||||   ||||||||| |||||| |||||||||| |||||||||||||||||||||     
T  14048969 acaactttcatgtttacacctaaaaccaattatgtaccaatcaatactagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattcac 14049068  T
Q  112 taagacctc 120  Q
    |||||||||    
T  14049069 taagacctc 14049077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 29267744 - 29267853
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  29267744 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 29267843  T
Q  111 ataagacctc 120  Q
     | |||||||    
T  29267844 ctgagacctc 29267853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 36038261 - 36038370
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | |||||  |||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  36038261 tacaactttcgtgtttacacctaaggccaattctgtaccaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 36038360  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  36038361 ctaagacctc 36038370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 7640958 - 7640859
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  7640958 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 7640859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 15118124 - 15118025
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  15118124 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 15118025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 52872844 - 52872745
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  52872844 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaacattca 52872745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 50222092 - 50222002
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  50222092 cctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattcactaagacctc 50222002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 44615679 - 44615788
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||||| || | | ||| ||||| ||||||| ||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  44615679 tacaaatttcgtgtttacacttaagaccaattatgtactaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 44615778  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  44615779 ctaagacctc 44615788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 49547545 - 49547436
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||| ||| |||||||||||||||||||||    
T  49547545 tacaaatttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattctgacaaatttgtgctgaaattcataaaaattca 49547446  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  49547445 ttaagacctc 49547436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 19617819 - 19617739
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||| | ||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  19617819 cctaagaccaactctgtaccaatcaataccagttttcatttcaaattcagacaaagttgtgctgaaattcataaaaattca 19617739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 30147306 - 30147414
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||| ||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  30147306 tacaacttttgtgtttacacctaagaccaattttgtaccaatcaattccatttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 30147405  T
Q  111 ataagacct 119  Q
     ||||||||    
T  30147406 ctaagacct 30147414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 1837291 - 1837192
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  1837291 tacaactttcatgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 1837192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 14970478 - 14970379
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | | ||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  14970478 tacaactttcgtgtttacacctaagaccaattctataccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 14970379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 52312952 - 52313051
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||| ||| |||||||||||||||||||||    
T  52312952 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaacttgtgctgaaattcataaaaattca 52313051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 14746090 - 14745993
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    |||||||||| || || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||    
T  14746090 tacaactttcttgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaatt 14745993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 362571 - 362679
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| || || | |||| |||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||| |||    
T  362571 tacaactttcgtgtttacacctaagactaattttgtatcaatcaataccagttttcatttcaaattcagacaaagttgtgctgaaattcataaaaaatca 362670  T
Q  111 ataagacct 119  Q
     || |||||    
T  362671 ctatgacct 362679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 18214956 - 18214876
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  18214956 cctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 18214876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 19243124 - 19243200
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    ||||||||||||||||  ||||| ||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  19243124 tgtaccaatcaataccagttttcgtttcaaattcggacaaagttgtgctgaaattcataaaaattcactaagacctc 19243200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 42225837 - 42225765
Alignment:
Q  276 taggattttcatttaaattagagatgaacatccttatgattttgttgcacccacatataagcaattcaattga 348  Q
    |||| ||||||||| |||| |||||||||||||| |||||||||||||| |||||||||||||||| ||||||    
T  42225837 tagggttttcatttgaattggagatgaacatcctcatgattttgttgcaaccacatataagcaattaaattga 42225765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 362764 - 362863
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||| |||||||||||||||    
T  362764 tacaactttagtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgatattcataaaaattca 362863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 14746283 - 14746184
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||  || | || || ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  14746283 tacaactttcgtccttacaccgaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 14746184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 19857969 - 19858068
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  |||||||||   |||| |||||||||| |||||||||||||||||||||    
T  19857969 tacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttctcattcggacaaagttgtgctgaaattcataaaaattca 19858068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 44772855 - 44772756
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | | ||||||| ||||||  |||||||||||||||| ||||| |||| |||||||||||||||||||||    
T  44772855 tacaactttcgtgtttacacctaagaccaattctctaccaataaataccagttttcatttaaaattcggacaatgttgtgctgaaattcataaaaattca 44772756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 3515398 - 3515497
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | |||||| |||||||||  ||||||||| |||||| |||||||||| ||| |||||||||||||||||    
T  3515398 tacaacttttgtgtttacacctaagaccaattttgtaccgatcaataccagttttcatttcaaattcggacaaagttgtgctaaaattcataaaaattca 3515497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 12033511 - 12033436
Alignment:
Q  45 gtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    |||||||||  ||||  ||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  12033511 gtaccaatctttaccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattcactaagacctc 12033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 15495945 - 15495846
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||  |||||  |||||||||| |||||||||||||||||||||    
T  15495945 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcattccaaattaggacaaagttgtgctgaaattcataaaaattca 15495846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 52313197 - 52313244
Alignment:
Q  63 tttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||| |||||| |||||||||| |||||||||||||||||||||    
T  52313197 tttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 52313244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 330
Target Start/End: Complemental strand, 28427404 - 28427325
Alignment:
Q  251 gttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgattttgttgcacccaca 330  Q
    ||||| ||||||||||||||| ||||||| |||||| || |||| || |||||||||||   | |||||||||| |||||    
T  28427404 gttgggcatttccaatatctctttttagggttttcaattgaattggatatgaacatcctcgcggttttgttgcaaccaca 28427325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 52872651 - 52872585
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattc 77  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| ||||||    
T  52872651 tacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttcaaattc 52872585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 14185545 - 14185625
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||| ||||| | ||||||||||||||||  |||| |||| |||||| |  ||||||| |||||||||| |||| |||||    
T  14185545 cctaagaccaattctgtaccaatcaataccagtttttatttcaaattcgggaaaagttgtgctgaaattcctaaagattca 14185625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 20261610 - 20261719
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  20261610 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 20261709  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  20261710 ctaagacctc 20261719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 23135970 - 23136079
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  23135970 tacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 23136069  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  23136070 ctaagacctc 23136079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 10684534 - 10684425
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||| |||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  10684534 tacaactttcgtgcttacacctaagaccaattctgtatcaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 10684435  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  10684434 ctaagacctc 10684425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 24897967 - 24897858
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||  ||||| ||||||||||||||||||  ||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  24897967 tacaactttcgtgtttacacctatgaccaattatgtaccaatcaataccagttttcatttcaaattcggataaagttgtgctgaaattcataaaaattca 24897868  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  24897867 ctaagacctc 24897858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 24900450 - 24900341
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||  ||||| ||||||||||||||||||  ||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  24900450 tacaactttcgtgtttacacctatgaccaattatgtaccaatcaataccagttttcatttcaaattcggataaagttgtgctgaaattcataaaaattca 24900351  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  24900350 ctaagacctc 24900341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 24902927 - 24902818
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||  ||||| ||||||||||||||||||  ||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  24902927 tacaactttcgtgtttacacctatgaccaattatgtaccaatcaataccagttttcatttcaaattcggataaagttgtgctgaaattcataaaaattca 24902828  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  24902827 ctaagacctc 24902818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 24905404 - 24905295
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||  ||||| ||||||||||||||||||  ||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  24905404 tacaactttcgtgtttacacctatgaccaattatgtaccaatcaataccagttttcatttcaaattcggataaagttgtgctgaaattcataaaaattca 24905305  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  24905304 ctaagacctc 24905295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 38967870 - 38967979
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||  || | ||||| ||||| ||||||||||||||||||  ||||||||| ||||||  ||||||||| |||||||||||||||||||||    
T  38967870 tacaactttcgtatttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcgaacaaagttgtgctgaaattcataaaaattca 38967969  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  38967970 ctaagacctc 38967979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 247 - 351
Target Start/End: Original strand, 31559068 - 31559172
Alignment:
Q  247 aaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgattttgttgcacccacatataagcaattcaatt 346  Q
    ||||||||| ||||||||||||||| ||||||| || | || |||||| |||||||||||||| || ||||||||||| ||||||||| |||| ||||||    
T  31559068 aaaggttgggcatttccaatatctcgttttagggttgtaatataaattggagatgaacatcctcattattttgttgcaaccacatataggcaactcaatt 31559167  T
Q  347 gatga 351  Q
    |||||    
T  31559168 gatga 31559172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 571788 - 571887
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  571788 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagtttttatttcaaattcggacaaagttgtgctgaaattcataaaaattca 571887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 18809333 - 18809432
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  18809333 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 18809432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 21154779 - 21154680
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || ||||||| || || | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  21154779 tacaactttcgtgtttacccctaagacaaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 21154680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 23711785 - 23711686
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  23711785 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 23711686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 39682704 - 39682803
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  39682704 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 39682803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 24907879 - 24907770
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || || | ||||  ||||| ||||||||||||||||||  ||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  24907879 tacaactttcatgtttacacctatgaccaattatgtaccaatcaataccagttttcatttcaaattcggataaagttgtgctgaaattcataaaaattca 24907780  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  24907779 ctaagacctc 24907770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 31345570 - 31345679
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| | ||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||| |    
T  31345570 tacaactttcgtgtttacacctaagatcaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattta 31345669  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  31345670 ctaagacctc 31345679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 6726438 - 6726546
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||  |||||| |||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  6726438 tacaactttcgtgtttacacctaagaccacttatgtatcaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 6726537  T
Q  111 ataagacct 119  Q
     || |||||    
T  6726538 ctatgacct 6726546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 23931851 - 23931947
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaat 107  Q
    ||||||||| ||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||    
T  23931851 tacaactttagtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaat 23931947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 22105856 - 22105955
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | || |||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  22105856 tacaactttcgtgtttacacctaagaccaattctgcaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 22105955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 24368217 - 24368316
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| | |||||||||||||||||||    
T  24368217 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgttgaaattcataaaaattca 24368316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 24681835 - 24681934
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || |  |||| ||||| | |||||||| |||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  24681835 tacaactttcgtgtttacagctaagaccaattctgtaccaaccaataccagttttcatttcaaattcagacaaagttgtgctgaaattcataaaaattca 24681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 26508247 - 26508346
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| ||||| |||| |||||||||||||||||||||    
T  26508247 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaggttgtgctgaaattcataaaaattca 26508346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 28577489 - 28577588
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||| |  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  28577489 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaatatcagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 28577588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 41523844 - 41523745
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| || || | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  41523844 tacaactttcgtgtttacacctaagactaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 41523745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 45027676 - 45027581
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaa 106  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||    
T  45027676 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaa 45027581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 22059654 - 22059767
Alignment:
Q  217 aacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgatt 316  Q
    |||| ||||||| |||| | |||||||| || ||||||| |||||||| |||||||||||||| ||||||| | |||| || |||||||| || ||||||    
T  22059654 aacaaagtattacaacagcaaactcaccatataggttgggcatttccagtatctccttttagggttttcatgtgaattggatatgaacattctcatgatt 22059753  T
Q  317 ttgttgcacccaca 330  Q
    |||||||| |||||    
T  22059754 ttgttgcaaccaca 22059767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 23131253 - 23131351
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||||||||||  ||||||||| || ||| |||||||||| |||||||||||||||||||||    
T  23131253 tacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttcaa-ttcggacaaagttgtgctgaaattcataaaaattca 23131351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 23133720 - 23133818
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||||||||||  ||||||||| || ||| |||||||||| |||||||||||||||||||||    
T  23133720 tacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttcaa-ttcggacaaagttgtgctgaaattcataaaaattca 23133818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 23709304 - 23709205
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| ||||||||||||||||||  | || |||| |||||| |||||||||| |||||||||||||||||||||    
T  23709304 tacaacttttgtgtttacacctaagaccaattatgtaccaatcaataccagtatttatttcaaattcggacaaagttgtgctgaaattcataaaaattca 23709205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 26505769 - 26505868
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| | ||| | ||||||||||||||||  ||||||||| |||||| ||||| |||| |||||||||||||||||||||    
T  26505769 tacaactttcgtgtttacacctaagatcaattctgtaccaatcaataccagttttcatttcaaattcggacaaggttgtgctgaaattcataaaaattca 26505868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 32039270 - 32039171
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| |||||   | ||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  32039270 tacaactttcgtgtttacacctaagaccaatcctttaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 32039171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 34402293 - 34402195
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||   ||||| ||||| ||||||||||||||||||  ||||||||| || ||| |||||||||| |||||||||||||||||||||    
T  34402293 tacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttcaa-ttcggacaaagttgtgctgaaattcataaaaattca 34402195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 24529318 - 24529219
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | |||||||||||||||   ||||||||| |||||  |||||||||| |||||||||||||||||||||    
T  24529318 tacaacttttgtgtttacacctaagaccaattttgtaccaatcaatacaagttttcattttaaatttggacaaagttgtgctgaaattcataaaaattca 24529219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 32214702 - 32214607
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaa 106  Q
    ||||||||| ||| || | ||||| | ||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||    
T  32214702 tacaacttttgtgtttacacctaagaacaattttgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaa 32214607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 24642487 - 24642421
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||  ||||| ||| |||||| |||||||||| |||||||||||||||||||||    
T  24642487 tgtaccaatcaataccagttttcttttcaaattcggacaaagttgtgctgaaattcataaaaattca 24642421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 41523651 - 41523554
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    |||||| |||||| || | ||||| ||||| | ||||||||||||||||  |||| |||| ||||||  ||||||||| |||||||||||||||||||    
T  41523651 tacaaccttcgtgtttacacctaagaccaattctgtaccaatcaataccagtttttatttcaaattcgtacaaagttgtgctgaaattcataaaaatt 41523554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 23706793 - 23706698
Alignment:
Q  14 aactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||| || | ||||| ||||| | |||||||||||||| |  ||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  23706793 aactttcgtgtttacacctaagaccaattctgtaccaatcaatagccgttttcatttcaaattcgga-aaagttgtgctgaaattcataaaaattca 23706698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 24918566 - 24918630
Alignment:
Q  46 taccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||||||||||| |  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  24918566 taccaatcaatatcagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 24918630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 21154586 - 21154487
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||  ||||| | | || |||||||||||  ||||||||| |||||| |||||||||  |||||||||||||||||||||    
T  21154586 tacaactttcgtgtttacacctaggaccaattctataacaatcaataccagttttcatttcaaattcggacaaagttctgctgaaattcataaaaattca 21154487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 24671416 - 24671515
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||  || | ||||| ||||| | ||||||||| ||||||  ||| ||||| |||||| |||||||||| |||||||||| ||||||||||    
T  24671416 tacaactttcgtttttacacctaagaccaattctgtaccaataaataccagtttgcatttcaaattcggacaaagttgtgctgaaattcttaaaaattca 24671515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 23709074 - 23709012
Alignment:
Q  48 ccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||  ||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  23709074 ccaatcaataccagttttcatttcaaaatcggacaaagttgtgctgaaattcataaaaattca 23709012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 23706988 - 23706896
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaa 104  Q
    ||||||||| ||| || | ||||| ||||| | |||||||||||||| |  ||||||||| |||||| || ||||||| |||||||||||||||    
T  23706988 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaatatcagttttcatttcaaattcgga-aaagttgtgctgaaattcataaa 23706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 324
Target Start/End: Complemental strand, 42827896 - 42827789
Alignment:
Q  217 aacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgatt 316  Q
    |||| ||||||| |||| | |||||||| || ||||||   |||||||||||||||||||||| || |||  | |||| || |||||||| || || |||    
T  42827896 aacaaagtattacaacagcaaactcaccatataggttgtgtatttccaatatctccttttagggttgtcaagtgaattggatatgaacattctcataatt 42827797  T
Q  317 ttgttgca 324  Q
    ||||||||    
T  42827796 ttgttgca 42827789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 32214508 - 32214442
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattc 77  Q
    ||||||||||||| | || ||||| ||||| | ||||||||||||||||  ||||||||| ||||||    
T  32214508 tacaactttcgtgttatcacctaagaccaattttgtaccaatcaataccagttttcattttaaattc 32214442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 1645 - 1744
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||||| |||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  1645 tacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccaattttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 1744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 68349 - 68459
Alignment:
Q  8 acatacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaat 107  Q
    |||||||||||||||| || | | ||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||    
T  68349 acatacaactttcgtgtttacacataagaccaattttgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaat 68448  T
Q  108 tcaataagacc 118  Q
    ||| |||||||    
T  68449 tcactaagacc 68459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 6337 - 6446
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||| ||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  6337 tacaactttcgtgtttacacctaagaccaattctgtaccaatgaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 6436  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  6437 ttaagacctc 6446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 9632 - 9741
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||| ||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  9632 tacaactttcgtgtttacacctaagaccaattctgtaccaataaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 9731  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  9732 ctaagacctc 9741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 18044 - 18153
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  18044 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 18143  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  18144 ctaagacctc 18153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 31594 - 31703
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| | |||||||||||||||||||    
T  31594 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgatgaaattcataaaaattca 31693  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  31694 ctaagacctc 31703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 58; Significance: 2e-24; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 134601 - 134710
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | | ||| ||||| ||||||| ||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  134601 tacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 134700  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  134701 ctaagacctc 134710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 137070 - 137179
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | | ||| ||||| ||||||| ||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  137070 tacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 137169  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  137170 ctaagacctc 137179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 139539 - 139648
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | | ||| ||||| ||||||| ||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  139539 tacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 139638  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  139639 ctaagacctc 139648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 142008 - 142117
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | | ||| ||||| ||||||| ||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  142008 tacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 142107  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  142108 ctaagacctc 142117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 144477 - 144586
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | | ||| ||||| ||||||| ||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  144477 tacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 144576  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  144577 ctaagacctc 144586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 5085 - 5184
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| |||||| | |||||||| |||||||||||||||||||||    
T  5085 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattcggccaaagttgtgctgaaattcataaaaattca 5184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 6842 - 6941
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  6842 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 6707 - 6608
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| ||||||||    
T  6707 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttcatttcaaattcggacaaagttgtgctgaaattcattaaaattca 6608  T

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Target: scaffold0278 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 8130 - 8229
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||| ||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  8130 tacaactttcgtgtttacacctaagaccaattctgtactaatcaataccagttttcatttcaaattcagacaaagttgtgctgaaattcataaaaattca 8229  T

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Target: scaffold0278; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 8323 - 8419
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaat 107  Q
    ||||||||| ||| || | ||||| ||||  ||||||||||||||||||  ||||||||| | |||| |||||||||| ||||||| ||||||||||    
T  8323 tacaacttttgtgtttacacctaagaccagttatgtaccaatcaataccagttttcatttcacattcggacaaagttgtgctgaaaatcataaaaat 8419  T

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Target: scaffold0134 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 38212 - 38311
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  38212 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 38311  T

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Target: scaffold0040 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 43130 - 43229
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| |||||  |||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  43130 tacaactttcgtgtttacacctaagaccaaaaatgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 43229  T

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Target: scaffold0023 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 94801 - 94900
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  94801 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 94900  T

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Target: scaffold0023; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 17211 - 17103
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | | |||||||||||||   ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  17211 tacaactttcgtgtttacacctaagaccaattctataccaatcaatacaagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 17112  T
Q  111 ataagacct 119  Q
     || |||||    
T  17111 ctatgacct 17103  T

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Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 17018 - 16953
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaatt 76  Q
    ||||||||||||| | |||||||| || || | ||||||||||||||||  ||||||||| |||||    
T  17018 tacaactttcgtgttatcccctaacacaaattctgtaccaatcaataccagttttcatttcaaatt 16953  T

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Target: scaffold0029 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 11699 - 11789
Alignment:
Q  30 cctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  11699 cctaagaccaattttgtaccaatcaataccagttttcatttcaaattccgacaaagttgtgctgaaattcataaaaattcactaagacctc 11789  T

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Target: scaffold0741 (Bit Score: 54; Significance: 6e-22; HSPs: 3)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 3881 - 3784
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaatt 108  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||    
T  3881 tacaactttcgtgtttccacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaatt 3784  T

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Target: scaffold0741; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 4041 - 3975
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  4041 tgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 3975  T

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Target: scaffold0741; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 3668 - 3589
Alignment:
Q  31 ctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||| ||| | |||||||||||||||||||    
T  3668 ctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaacttgtgttgaaattcataaaaattca 3589  T

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Target: scaffold0422 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 3414 - 3523
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || |  |||| | ||| |||||| |||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  3414 tacaactttcgtgtttacaactaagaacaattatgtaacaatcaataccagttttcatttcaaattctgacaaagttgtgctgaaattcataaaaattca 3513  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  3514 ctaagacctc 3523  T

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Target: scaffold0454 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 1 - 76
Alignment:
Q  45 gtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    |||||||||||||||  ||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  1 gtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattcactaagacctc 76  T

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Target: scaffold0444 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 13783 - 13882
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  13783 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 13882  T

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Target: scaffold0306 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 11111 - 11012
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | |||||||||||||||| |||||||||| |||||| |||||||||| |||||||||||  ||||||||    
T  11111 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttcatttcaaattcggacaaagttgtgctgaaattcaggaaaattca 11012  T

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Target: scaffold0306; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 15354 - 15402
Alignment:
Q  62 ttttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||||||  ||||||||| ||||||||||||||| |||||    
T  15354 ttttcatttcaaattcgaacaaagttgtgctgaaattcataaacattca 15402  T

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Target: scaffold0044 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 40790 - 40889
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| ||||| | ||||||||||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  40790 tacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttaatttcaaattcggacaaagttgtgctgaaattcataaaaattca 40889  T

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Target: scaffold0254 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 21138 - 21248
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttc-atttaaaattcagacaaagttgggctgaaattcataaaaattc 109  Q
    |||||||||| || || | ||||| ||||| | ||||||||||||||||  ||||| |||| |||||| |||||||||| ||||||||||||||||||||    
T  21138 tacaactttcttgtttacacctaagaccaattctgtaccaatcaataccagttttctatttcaaattcggacaaagttgtgctgaaattcataaaaattc 21237  T
Q  110 aataagacctc 120  Q
    | |||||||||    
T  21238 actaagacctc 21248  T

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Target: scaffold0129 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 3748 - 3861
Alignment:
Q  217 aacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatccttatgatt 316  Q
    |||| ||||||| |||| | |||||||| || ||||||| |||||||| |||||||||||||| ||||||| | |||| || |||||||| || ||||||    
T  3748 aacaaagtattacaacagcaaactcaccatataggttgggcatttccagtatctccttttagggttttcatgtgaattggatatgaacattctcatgatt 3847  T
Q  317 ttgttgcacccaca 330  Q
    |||||||| |||||    
T  3848 ttgttgcaaccaca 3861  T

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Target: scaffold0117 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 39723 - 39832
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | ||||| ||||| | |||||||||||||| |  ||||||||| |||||| |||||||||| |||||||||||||||| ||||    
T  39723 tacaacttttgtgtttacacctaagaccaattctgtaccaatcaatatcagttttcatttcaaattcggacaaagttgtgctgaaattcataaaagttca 39822  T
Q  111 ataagacctc 120  Q
     |||||||||    
T  39823 ctaagacctc 39832  T

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Target: scaffold0043 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 10182 - 10281
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| |||||   |||||||||||||||   ||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  10182 tacaactttcgtgtttacacctaagaccaacactgtaccaatcaatactagttttcatttcaaattcagtcaaagttgtgctgaaattcataaaaattca 10281  T

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Target: scaffold0043; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 10375 - 10474
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| |  | | ||| ||||| ||||||||||||||||||  ||||||||| ||||||||| ||||||| ||||||||||| |||||||||    
T  10375 tacaactttcgtgttgacacataagaccaattatgtaccaatcaataccagttttcattttaaattcagataaagttgtgctgaaattcacaaaaattca 10474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 19825 - 19751
Alignment:
Q  46 taccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    ||||||||||||||  ||||||||| |||||| |||||||||  ||||||||||||||||||||| |||||||||    
T  19825 taccaatcaataccagttttcatttcaaattcggacaaagttttgctgaaattcataaaaattcactaagacctc 19751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 980 - 1088
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | ||||| || ||   ||||||||||||||||  |||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  980 tacaactttcgtgtttactcctaagacgaatgctgtaccaatcaataccagtttttatttcaaattcggacaaagttgtgctgaaattcataaaaattca 1079  T
Q  111 ataagacct 119  Q
     || |||||    
T  1080 ctatgacct 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 348
Target Start/End: Complemental strand, 36055 - 35919
Alignment:
Q  212 caacaaacatagtattataacaacgaactcaccgtaaaggttggacatttccaatatctccttttaggattttcatttaaattagagatgaacatcctta 311  Q
    ||||||||| |||||||||  ||  |||||||| |||| ||||| |||||||| |||||||||||||| || ||| || |||| ||||| |||||| | |    
T  36055 caacaaacaaagtattatacaaaataactcaccataaatgttgggcatttccagtatctccttttagggttgtcaattgaatttgagataaacatcttca 35956  T
Q  312 tgattttgttgcacccacatataagcaattcaattga 348  Q
    |  |||||||||| ||||| ||| ||| |||||||||    
T  35955 ttgttttgttgcaaccacaaataggcatttcaattga 35919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 7621 - 7555
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||| ||||    
T  7621 tgtaccaatcaataccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaatttca 7555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 7461 - 7363
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| ||| || | || || ||||| | |||||||||||||||| | |||||||| ||||||  |||| |||| |||||||||||||||||||||    
T  7461 tacaacttttgtgtttacacccaagaccaattctgtaccaatcaatacc-agtttcatttcaaattcgaacaatgttgtgctgaaattcataaaaattca 7363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 7234 - 7174
Alignment:
Q  46 taccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaa 106  Q
    ||||||||||||||   || ||||| |||||| |||||||||| |||||||||||||||||    
T  7234 taccaatcaataccagattgcatttcaaattcggacaaagttgtgctgaaattcataaaaa 7174  T

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Target: scaffold0436 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 8444 - 8518
Alignment:
Q  46 taccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattcaataagacctc 120  Q
    |||||||||||| |  ||||||||| |||||| ||||||| || ||||||||||||||||||||| |||||||||    
T  8444 taccaatcaatatcagttttcatttcaaattcggacaaagctgtgctgaaattcataaaaattcactaagacctc 8518  T

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Target: scaffold0322 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 18361 - 18427
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| ||  ||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  18361 tgtaccaatcaatgccagttttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 18427  T

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Target: scaffold1792 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 791 - 857
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||   |||||||| |||||| || ||||||| |||||||||||||||||||||    
T  791 tgtaccaatcaataccagatttcatttcaaattcggaaaaagttgtgctgaaattcataaaaattca 857  T

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Target: scaffold1792; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 636 - 697
Alignment:
Q  49 caatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    |||| ||||||  ||||||||| |||||  |||||||||| ||||||||||||| |||||||    
T  636 caataaataccagttttcatttcaaatttggacaaagttgtgctgaaattcatacaaattca 697  T

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Target: scaffold0149 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 30443 - 30509
Alignment:
Q  44 tgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||||||  ||||||||| ||| || |||||||||| | |||||||||||||||||||    
T  30443 tgtaccaatcaataccagttttcatttcaaaatcggacaaagttgtgttgaaattcataaaaattca 30509  T

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Target: scaffold0149; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 30603 - 30669
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattc 77  Q
    ||||||||||||| || | ||||| ||||| ||||||||||||||||||  ||||||||| ||||||    
T  30603 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattc 30669  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 501455 - 501554
Alignment:
Q  11 tacaactttcgtgatttcccctaaaaccaagtatgtaccaatcaatacctattttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||||||| || | | ||| ||||| | |||| ||||||||| |  ||||||||| ||||||  |||| |||| |||||||||||||||||||||    
T  501455 tacaactttcgtgtttacacataagaccaattctgtaacaatcaatatcacttttcatttcaaattcgcacaatgttgtgctgaaattcataaaaattca 501554  T

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Target: scaffold0151 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 37110 - 37064
Alignment:
Q  64 ttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||    
T  37110 ttcatttcaaattcggacaaagttgtgctgaaattcataaaaattca 37064  T

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Target: scaffold0151; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 36919 - 36871
Alignment:
Q  62 ttttcatttaaaattcagacaaagttgggctgaaattcataaaaattca 110  Q
    ||||||||| |||||  || ||||||| |||||||||||||||||||||    
T  36919 ttttcatttcaaattttgataaagttgtgctgaaattcataaaaattca 36871  T

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